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Cucsat.G541.T9 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ACGGTAAAAGCATGGGGTGATTTGTAGAGAAGCAAACCCGAAAACCCTCACCAAATGTCCAAATCGAATCCTTGGGTTTGGGCTTTCATCTTCATCGCTTCGGTAGCCGATACTTCCATTGGAGTCTTCCTTCAATCGCCATTTCTTCTTCACAATCTTTGTTGAAATGCAAGTCGTTTCCAGCTCTCGTCGCCTCTCCAATCTTCTCAAATCTTCTTCCACCTCTCTCCAGTTTTATCGATTTCTTGTTTCTAGTTTTCCCGTAAACCAGGATCCTCCAACTTCTCATCAATGGCGGACTGTTTCTGGTAATTATACCATTCACTTTCCAGTTTTCAACGTTTCGTAAATTTTTTAAAATCTATTAGAAGAATTTTACTGGAACCGTATTGGAATTTACGTGTTTTAGGTCAGATTTTATGGTTATTTGTACTAGTTTGGTTAGGAAATGGGAGTAGGGGAGTTTCTTATGCTCGAACTGAAATTTTAATATCTCAGAGCAGAAGTTCATTATGTCAATGACTCAATGTAATGAACAGGGATAGCTCGACAATGTTGTTCTCCAATGGCGCAAGACTGTTCCACTCCTATGTATCTATCGATGCCTAATGCTTCTTTTTCATCAGTGGCACATGCTGCTGAGGAAACCGCTACAGGTTGTTGTTTTGTTTTGTTTTTTTTTTATTCTGCTGATATTTTCTGGTTTTGTTTGGTGTGATTTATGAAATTCTTTAACATGGTTTTTTTAATTTTGTTTTTGTGTAGTCACTGCCAAGGAATTATATGATAAAATGCTTGAATCTGTAGAGGTTAAAAGAAGCATGCCTCCTAATGCTTGGATGTGGTCATTGATCCAAAATTGTAAAACCGAGGAGGATATTCAGCTTCTATTTGGCATTTTGAAAAGGCTGCGGATATTTGTTAGTCCCTTAGCTCTTACACTCCTATTGTTATGCTCCCTTTTGAGGTCACATTTTTAGTTTTTTCCGTTTGGTTTGGTTGTAGAGGCTATCAAATCTTCGTATTCACGATAATTTTAATTCTCATCTTTGCCGAGAGGTCACCAAAGCATGTGTACGGGCAGGTGCCCTTCAATTTGGTATGCCATAATATCCTTTATATGCTTGGTTGTGCAATTGGTATACAGTTCTTTCTTTTTGTGGTTTGCAGTTTACTATGATACGCATGATGGGACTTAGTCTTAATTTACATGTGCAGGAAAGAAGACCTTGTGGATCCATAACTTAAATGGATTGACGCCCAGTGTTGCATCTGCTCACCATCTACTGGTCTTAAGGATATATTTATTACTACTATGTTTATTGTTGAGCTTTCAGTTTCGGATTTATTAATCTACGTGTTCTCTTCCTGTTCAGGCATATGCCGAAGAGCACAATGATCTTAAACTCATGGGTGAAGTTGTGGCACTTATAAGAAGGAATAAATTGCCACTACAACCTGGTACAGCAGATATTGTTTTCAGGTTAGCTTGATGAAGCTCAATTGGGTTCTAAAAAGTAACCAATCATTTATCTGTGTCAATAGAAATAAACATAAATTTCTATTTTGCATTCTGAAGTTCTGAATCGTGTCATATTTGTCTTGCATTGTTCGCTATAAGATTGTATTGATTCTTTGCAGGATATGTTATAATGCTGACAATTGGGCGTTGCTTTCCAAATACTTCAAAAAATTCTCCAAGGCTGGAGTAAATTTTCGCCGAACATCATTTGACACGTTGATGAGATTTGCTTCCAAAATAGGTAGCCACACTACTTGCATTTCTCAATGAACGATCAATTTTATTCATTGTTTTGGTTGGTTGCATATTTTTAAGTATTGGTATGAATAAATCATTTGGATATTGAGTAATGCGCAAAAGATTCGTTGTGTAAGTTAGCTTCCTTTTTACTTACATTTGTTTGTCGCTACAGTTTATTTTCTTTTTAAGGCAGAAAATGTCTTCGTTCTATTAAAGGTACACATGGGGGTGGAGGCTTCTTGACTAAGTTTTGTTGAATGTATTTCAACTGCATTTTTTTCAAAATCTTAATCATGTGTAAGGTTATTGAACTTTCAGTTTTGTGTCAATCACACTGATAAGAGCTTTTCATTATTATTCTGCATCAAATAGAAAAATAAGCTGTTGCTTCAGTTTTACTACCAAAAAAAAAAAAAAAAAATCCTCATTGTTCTGACCAACATTTCTAAGTTCTTAGGGCACTCTTTTCATTGTATTAAATAGTTGCTTATGAAGCTCCAAAACTTCCTTTGCGTAGGAGATGTTGATTGTCTATGGAAATTTGATAGGCTGAGAGCTGAAACAACAAAGCGACATACTCTTGGAACTGCATTTTCACGAGCTAAGGTAATGAAGTTGTTCAAAGCATCTTCGGACGTGTTCCATTCCATTGCAAAATTAATACGACCTATGTGGTTCTAGTTTTCAAGAAGTGCTTATATAACAAGTGTTTCACATGTCATTGCAAAATTAATACGACCTATGTGGTTCTAGTTTTCAAGAAGTGCTTATATAACAAGTGTTTCACATGTCTTAATTTTCTTTTTGTATATTTCCCAGGGTCTTCTATTAGAACGTAAGCCTGAGGAAGCTGCTGCTATCATTCATGAAATTTATCAGGTGACTGCTGTTCTCAACATTCTTTCTCTAATGAACAAGTCTTGATTTATCAACTCTAGACGTCCTCTATTTTGATATTTAGAGAATTTTCACCTAAAATGTTAATCTTTGTATATTCGCATTTGAGTTCTTAATTGTCGGCACCATGGATAGAAGACAAAAACATAAACGAGTGGGTGATCGAGTCTTGAAGAGTCGTATCTCATTCTGTTTTTTTTTTAATGCCAGGTTTTTTCGAATTCCAAGTCGGACTTTATGACCGAGATCCAAAAGATGGTCAATGAATGGCCGTCACAAGTTAGCGAGCACCAAAAAGAAGAACATAGAAAGGTCTAATAAATTACACACGATTTATTCATTTGTTTCATCAATCATGGGAAATAAGCTTAACAGTAATATCATATTCTATTCCTCAGGAATTTGACGCAGATCTTAATTCTTATATTTCTACAATGCTAAGTAATCTACAAAATGTTGGAGCAGAGGTGAACGTAAACATCTAAATCGGTAAAGAACATAACCTTGATTTCGGATGAACTTTCATCAGCATGATTCAAAAATAATTCTGTTATGATGGGGGATGCTGAATCCAGTTGAGAAGCTGACCAAAATTGTTTCTTTACGAGACGCAATGGTTCGAGAGAGACTTGAGACGAGACAGAAAAGACATCAAGGTGGTTTATCTTTACTGTTTTTTCGAGTAATACCAAATAATCCAGCTCTGCTAACTGAATTCCTTATGGTGTGTGGGTCTTGTTTTTGCATCAATAGATTTATAGGCCATAACATTAGGTATTGCTTTGTATTCAATCTTCTCTCTTCTTTTATAATTGGAAGAAATGTACATTATATTTTCAACTATAGTTTCTTTGCACGAAAGTTGGGCTATGTACCTATCTATGGAAGCAATTGACAAGACTGTCTCGCAAAGATGCCTCCTACTTCTTTCGAGGAGAAATGTTGGCAATGAAACCAAAGTTTTTTCTTTCTAAAATTAAATCAGAAATCTTTTGCTTTTGTCCTTTGATAGAGATGGTATGATTATAATTGTAATTACTATATATTA ATGGGTGAAGTTGTGGCACTTATAAGAAGGAATAAATTGCCACTACAACCTGGTACAGCAGATATTGTTTTCAGGATATGTTATAATGCTGACAATTGGGCGTTGCTTTCCAAATACTTCAAAAAATTCTCCAAGGCTGGAGTAAATTTTCGCCGAACATCATTTGACACGTTGATGAGATTTGCTTCCAAAATAGGAGATGTTGATTGTCTATGGAAATTTGATAGGCTGAGAGCTGAAACAACAAAGCGACATACTCTTGGAACTGCATTTTCACGAGCTAAGGGTCTTCTATTAGAACGTAAGCCTGAGGAAGCTGCTGCTATCATTCATGAAATTTATCAGGTTTTTTCGAATTCCAAGTCGGACTTTATGACCGAGATCCAAAAGATGGTCAATGAATGGCCGTCACAAGTTAGCGAGCACCAAAAAGAAGAACATAGAAAGGAATTTGACGCAGATCTTAATTCTTATATTTCTACAATGCTAAGTAATCTACAAAATGTTGGAGCAGAGGTGAACGTAAACATCTAA MGEVVALIRRNKLPLQPGTADIVFRICYNADNWALLSKYFKKFSKAGVNFRRTSFDTLMRFASKIGDVDCLWKFDRLRAETTKRHTLGTAFSRAKGLLLERKPEEAAAIIHEIYQVFSNSKSDFMTEIQKMVNEWPSQVSEHQKEEHRKEFDADLNSYISTMLSNLQNVGAEVNVNI Homology
BLAST of Cucsat.G541.T9 vs. NCBI nr
Match: XP_031739007.1 (uncharacterized protein LOC101219378 isoform X2 [Cucumis sativus]) HSP 1 Score: 350 bits (898), Expect = 2.58e-119 Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0
BLAST of Cucsat.G541.T9 vs. NCBI nr
Match: XP_004134191.1 (uncharacterized protein LOC101219378 isoform X1 [Cucumis sativus] >XP_011651034.1 uncharacterized protein LOC101219378 isoform X1 [Cucumis sativus] >KGN57075.1 hypothetical protein Csa_010398 [Cucumis sativus]) HSP 1 Score: 350 bits (898), Expect = 1.68e-118 Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0
BLAST of Cucsat.G541.T9 vs. NCBI nr
Match: XP_016899077.1 (PREDICTED: uncharacterized protein LOC103483802 isoform X3 [Cucumis melo]) HSP 1 Score: 318 bits (814), Expect = 2.66e-106 Identity = 158/177 (89.27%), Postives = 165/177 (93.22%), Query Frame = 0
BLAST of Cucsat.G541.T9 vs. NCBI nr
Match: XP_008438811.1 (PREDICTED: uncharacterized protein LOC103483802 isoform X2 [Cucumis melo]) HSP 1 Score: 318 bits (814), Expect = 9.40e-106 Identity = 158/177 (89.27%), Postives = 165/177 (93.22%), Query Frame = 0
BLAST of Cucsat.G541.T9 vs. NCBI nr
Match: XP_008438809.1 (PREDICTED: uncharacterized protein LOC103483802 isoform X1 [Cucumis melo] >XP_008438810.1 PREDICTED: uncharacterized protein LOC103483802 isoform X1 [Cucumis melo]) HSP 1 Score: 318 bits (814), Expect = 9.70e-106 Identity = 158/177 (89.27%), Postives = 165/177 (93.22%), Query Frame = 0
BLAST of Cucsat.G541.T9 vs. ExPASy TrEMBL
Match: A0A0A0L557 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G151530 PE=4 SV=1) HSP 1 Score: 350 bits (898), Expect = 8.11e-119 Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0
BLAST of Cucsat.G541.T9 vs. ExPASy TrEMBL
Match: A0A1S4DSV5 (uncharacterized protein LOC103483802 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103483802 PE=4 SV=1) HSP 1 Score: 318 bits (814), Expect = 1.29e-106 Identity = 158/177 (89.27%), Postives = 165/177 (93.22%), Query Frame = 0
BLAST of Cucsat.G541.T9 vs. ExPASy TrEMBL
Match: A0A1S3AWY3 (uncharacterized protein LOC103483802 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483802 PE=4 SV=1) HSP 1 Score: 318 bits (814), Expect = 4.55e-106 Identity = 158/177 (89.27%), Postives = 165/177 (93.22%), Query Frame = 0
BLAST of Cucsat.G541.T9 vs. ExPASy TrEMBL
Match: A0A1S3AXY5 (uncharacterized protein LOC103483802 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483802 PE=4 SV=1) HSP 1 Score: 318 bits (814), Expect = 4.70e-106 Identity = 158/177 (89.27%), Postives = 165/177 (93.22%), Query Frame = 0
BLAST of Cucsat.G541.T9 vs. ExPASy TrEMBL
Match: A0A6J1GW56 (uncharacterized protein LOC111458035 OS=Cucurbita moschata OX=3662 GN=LOC111458035 PE=4 SV=1) HSP 1 Score: 310 bits (794), Expect = 4.91e-103 Identity = 153/177 (86.44%), Postives = 166/177 (93.79%), Query Frame = 0
BLAST of Cucsat.G541.T9 vs. TAIR 10
Match: AT4G15640.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G21465.1); Has 38 Blast hits to 38 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 191.0 bits (484), Expect = 7.9e-49 Identity = 97/178 (54.49%), Postives = 126/178 (70.79%), Query Frame = 0
BLAST of Cucsat.G541.T9 vs. TAIR 10
Match: AT3G21465.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G15640.1); Has 38 Blast hits to 38 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 183.0 bits (463), Expect = 2.2e-46 Identity = 94/178 (52.81%), Postives = 120/178 (67.42%), Query Frame = 0
BLAST of Cucsat.G541.T9 vs. TAIR 10
Match: AT3G21465.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G15640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 124.8 bits (312), Expect = 7.0e-29 Identity = 58/95 (61.05%), Postives = 71/95 (74.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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