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Cucsat.G541.T8 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ACGGTAAAAGCATGGGGTGATTTGTAGAGAAGCAAACCCGAAAACCCTCACCAAATGTCCAAATCGAATCCTTGGGTTTGGGCTTTCATCTTCATCGCTTCGGTAGCCGATACTTCCATTGGAGTCTTCCTTCAATCGCCATTTCTTCTTCACAATCTTTGTTGAAATGCAAGTCGTTTCCAGCTCTCGTCGCCTCTCCAATCTTCTCAAATCTTCTTCCACCTCTCTCCAGTTTTATCGATTTCTTGTTTCTAGTTTTCCCGTAAACCAGGATCCTCCAACTTCTCATCAATGGCGGACTGTTTCTGGTAATTATACCATTCACTTTCCAGTTTTCAACGTTTCGTAAATTTTTTAAAATCTATTAGAAGAATTTTACTGGAACCGTATTGGAATTTACGTGTTTTAGGTCAGATTTTATGGTTATTTGTACTAGTTTGGTTAGGAAATGGGAGTAGGGGAGTTTCTTATGCTCGAACTGAAATTTTAATATCTCAGAGCAGAAGTTCATTATGTCAATGACTCAATGTAATGAACAGGGATAGCTCGACAATGTTGTTCTCCAATGGCGCAAGACTGTTCCACTCCTATGTATCTATCGATGCCTAATGCTTCTTTTTCATCAGTGGCACATGCTGCTGAGGAAACCGCTACAGGTTGTTGTTTTGTTTTGTTTTTTTTTTATTCTGCTGATATTTTCTGGTTTTGTTTGGTGTGATTTATGAAATTCTTTAACATGGTTTTTTTAATTTTGTTTTTGTGTAGTCACTGCCAAGGAATTATATGATAAAATGCTTGAATCTGTAGAGGTTAAAAGAAGCATGCCTCCTAATGCTTGGATGTGGTCATTGATCCAAAATTGTAAAACCGAGGAGGATATTCAGCTTCTATTTGGCATTTTGAAAAGGCTGCGGATATTTGTTAGTCCCTTAGCTCTTACACTCCTATTGTTATGCTCCCTTTTGAGGTCACATTTTTAGTTTTTTCCGTTTGGTTTGGTTGTAGAGGCTATCAAATCTTCGTATTCACGATAATTTTAATTCTCATCTTTGCCGAGAGGTCACCAAAGCATGTGTACGGGCAGGTGCCCTTCAATTTGGTATGCCATAATATCCTTTATATGCTTGGTTGTGCAATTGGTATACAGTTCTTTCTTTTTGTGGTTTGCAGTTTACTATGATACGCATGATGGGACTTAGTCTTAATTTACATGTGCAGGAAAGAAGACCTTGTGGATCCATAACTTAAATGGATTGACGCCCAGTGTTGCATCTGCTCACCATCTACTGGTCTTAAGGATATATTTATTACTACTATGTTTATTGTTGAGCTTTCAGTTTCGGATTTATTAATCTACGTGTTCTCTTCCTGTTCAGGCATATGCCGAAGAGCACAATGATCTTAAACTCATGGGTGAAGTTGTGGCACTTATAAGAAGGAATAAATTGCCACTACAACCTGGTACAGCAGATATTGTTTTCAGGTTAGCTTGATGAAGCTCAATTGGGTTCTAAAAAGTAACCAATCATTTATCTGTGTCAATAGAAATAAACATAAATTTCTATTTTGCATTCTGAAGTTCTGAATCGTGTCATATTTGTCTTGCATTGTTCGCTATAAGATTGTATTGATTCTTTGCAGGATATGTTATAATGCTGACAATTGGGCGTTGCTTTCCAAATACTTCAAAAAATTCTCCAAGGCTGGAGTAAATTTTCGCCGAACATCATTTGACACGTTGATGAGATTTGCTTCCAAAATAGGTAGCCACACTACTTGCATTTCTCAATGAACGATCAATTTTATTCATTGTTTTGGTTGGTTGCATATTTTTAAGTATTGGTATGAATAAATCATTTGGATATTGAGTAATGCGCAAAAGATTCGTTGTGTAAGTTAGCTTCCTTTTTACTTACATTTGTTTGTCGCTACAGTTTATTTTCTTTTTAAGGCAGAAAATGTCTTCGTTCTATTAAAGGTACACATGGGGGTGGAGGCTTCTTGACTAAGTTTTGTTGAATGTATTTCAACTGCATTTTTTTCAAAATCTTAATCATGTGTAAGGTTATTGAACTTTCAGTTTTGTGTCAATCACACTGATAAGAGCTTTTCATTATTATTCTGCATCAAATAGAAAAATAAGCTGTTGCTTCAGTTTTACTACCAAAAAAAAAAAAAAAAAATCCTCATTGTTCTGACCAACATTTCTAAGTTCTTAGGGCACTCTTTTCATTGTATTAAATAGTTGCTTATGAAGCTCCAAAACTTCCTTTGCGTAGGAGATGTTGATTGTCTATGGAAATTTGATAGGCTGAGAGCTGAAACAACAAAGCGACATACTCTTGGAACTGCATTTTCACGAGCTAAGGTAATGAAGTTGTTCAAAGCATCTTCGGACGTGTTCCATTCCATTGCAAAATTAATACGACCTATGTGGTTCTAGTTTTCAAGAAGTGCTTATATAACAAGTGTTTCACATGTCATTGCAAAATTAATACGACCTATGTGGTTCTAGTTTTCAAGAAGTGCTTATATAACAAGTGTTTCACATGTCTTAATTTTCTTTTTGTATATTTCCCAGGGTCTTCTATTAGAACGTAAGCCTGAGGAAGCTGCTGCTATCATTCATGAAATTTATCAGGTGACTGCTGTTCTCAACATTCTTTCTCTAATGAACAAGTCTTGATTTATCAACTCTAGACGTCCTCTATTTTGATATTTAGAGAATTTTCACCTAAAATGTTAATCTTTGTATATTCGCATTTGAGTTCTTAATTGTCGGCACCATGGATAGAAGACAAAAACATAAACGAGTGGGTGATCGAGTCTTGAAGAGTCGTATCTCATTCTGTTTTTTTTTTAATGCCAGGTTTTTTCGAATTCCAAGTCGGACTTTATGACCGAGATCCAAAAGATGGTCAATGAATGGCCGTCACAAGTTAGCGAGCACCAAAAAGAAGAACATAGAAAGGTCTAATAAATTACACACGATTTATTCATTTGTTTCATCAATCATGGGAAATAAGCTTAACAGTAATATCATATTCTATTCCTCAGGAATTTGACGCAGATCTTAATTCTTATATTTCTACAATGCTAAGTAATCTACAAAATGTTGGAGCAGAGGTGAACGTAAACATCTAAATCGGTAAAGAACATAACCTTGATTTCGGATGAACTTTCATCAGCATGATTCAAAAATAATTCTGTTATGATGGGGGATGCTGAATCCAGTTGAGAAGCTGACCAAAATTGTTTCTTTACGAGACGCAATGGTTCGAGAGAGACTTGAGACGAGACAGAAAAGACATCAAGGTGGTTTATCTTTACTGTTTTTTCGAGTAATACCAAATAATCCAGCTCTGCTAACTGAATTCCTTATGGTGTGTGGGTCTTGTTTTTGCATCAATAGATTTATAGGCCATAACATTAGGTATTGCTTTGTATTCAATCTTCTCTCTTCTTTTATAATTGGAAGAAATGTACATTATATTTTCAACTATAGTTTCTTTGCACGAAAGTTGGGCTATGTACCTATCTATGGAAGCAATTGACAAGACTGTCTCGCAAAGATGCCTCCTACTTCTTTCGAGGAGAAATGTTGGCAATGAAACCAAAGTTTTTTCTTTCTAAAATTAAATCAGAAATCTTTTGCTTTTGTCCTTTGATAGAGATGGTATGATTATAATTGTAATTACTATATATTA ATGCTTGAATCTGTAGAGGTTAAAAGAAGCATGCCTCCTAATGCTTGGATGTGGTCATTGATCCAAAATTGTAAAACCGAGGAGGATATTCAGCTTCTATTTGGCATTTTGAAAAGGCTGCGGATATTTAGGCTATCAAATCTTCGTATTCACGATAATTTTAATTCTCATCTTTGCCGAGAGGTCACCAAAGCATGTGTACGGGCAGGTGCCCTTCAATTTGGAAAGAAGACCTTGTGGATCCATAACTTAAATGGATTGACGCCCAGTGTTGCATCTGCTCACCATCTACTGGCATATGCCGAAGAGCACAATGATCTTAAACTCATGGGTGAAGTTGTGGCACTTATAAGAAGGAATAAATTGCCACTACAACCTGGTACAGCAGATATTGTTTTCAGGATATGTTATAATGCTGACAATTGGGCGTTGCTTTCCAAATACTTCAAAAAATTCTCCAAGGCTGGAGTAAATTTTCGCCGAACATCATTTGACACGTTGATGAGATTTGCTTCCAAAATAGGAGATGTTGATTGTCTATGGAAATTTGATAGGCTGAGAGCTGAAACAACAAAGCGACATACTCTTGGAACTGCATTTTCACGAGCTAAGGGTCTTCTATTAGAACGTAAGCCTGAGGAAGCTGCTGCTATCATTCATGAAATTTATCAGGTTTTTTCGAATTCCAAGTCGGACTTTATGACCGAGATCCAAAAGATGGTCAATGAATGGCCGTCACAAGTTAGCGAGCACCAAAAAGAAGAACATAGAAAGGAATTTGACGCAGATCTTAATTCTTATATTTCTACAATGCTAAGTAATCTACAAAATGTTGGAGCAGAGGTGAACGTAAACATCTAA MLESVEVKRSMPPNAWMWSLIQNCKTEEDIQLLFGILKRLRIFRLSNLRIHDNFNSHLCREVTKACVRAGALQFGKKTLWIHNLNGLTPSVASAHHLLAYAEEHNDLKLMGEVVALIRRNKLPLQPGTADIVFRICYNADNWALLSKYFKKFSKAGVNFRRTSFDTLMRFASKIGDVDCLWKFDRLRAETTKRHTLGTAFSRAKGLLLERKPEEAAAIIHEIYQVFSNSKSDFMTEIQKMVNEWPSQVSEHQKEEHRKEFDADLNSYISTMLSNLQNVGAEVNVNI Homology
BLAST of Cucsat.G541.T8 vs. NCBI nr
Match: XP_031739007.1 (uncharacterized protein LOC101219378 isoform X2 [Cucumis sativus]) HSP 1 Score: 573 bits (1478), Expect = 1.02e-205 Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 0
BLAST of Cucsat.G541.T8 vs. NCBI nr
Match: XP_004134191.1 (uncharacterized protein LOC101219378 isoform X1 [Cucumis sativus] >XP_011651034.1 uncharacterized protein LOC101219378 isoform X1 [Cucumis sativus] >KGN57075.1 hypothetical protein Csa_010398 [Cucumis sativus]) HSP 1 Score: 573 bits (1478), Expect = 7.98e-205 Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 0
BLAST of Cucsat.G541.T8 vs. NCBI nr
Match: XP_016899077.1 (PREDICTED: uncharacterized protein LOC103483802 isoform X3 [Cucumis melo]) HSP 1 Score: 524 bits (1349), Expect = 8.61e-186 Identity = 257/286 (89.86%), Postives = 271/286 (94.76%), Query Frame = 0
BLAST of Cucsat.G541.T8 vs. NCBI nr
Match: KAG7018634.1 (hypothetical protein SDJN02_20504 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 525 bits (1352), Expect = 1.23e-185 Identity = 255/286 (89.16%), Postives = 274/286 (95.80%), Query Frame = 0
BLAST of Cucsat.G541.T8 vs. NCBI nr
Match: KAG6582236.1 (hypothetical protein SDJN03_22238, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 525 bits (1352), Expect = 1.23e-185 Identity = 255/286 (89.16%), Postives = 274/286 (95.80%), Query Frame = 0
BLAST of Cucsat.G541.T8 vs. ExPASy TrEMBL
Match: A0A0A0L557 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G151530 PE=4 SV=1) HSP 1 Score: 573 bits (1478), Expect = 3.86e-205 Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 0
BLAST of Cucsat.G541.T8 vs. ExPASy TrEMBL
Match: A0A1S4DSV5 (uncharacterized protein LOC103483802 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103483802 PE=4 SV=1) HSP 1 Score: 524 bits (1349), Expect = 4.17e-186 Identity = 257/286 (89.86%), Postives = 271/286 (94.76%), Query Frame = 0
BLAST of Cucsat.G541.T8 vs. ExPASy TrEMBL
Match: A0A1S3AWY3 (uncharacterized protein LOC103483802 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483802 PE=4 SV=1) HSP 1 Score: 524 bits (1349), Expect = 1.71e-185 Identity = 257/286 (89.86%), Postives = 271/286 (94.76%), Query Frame = 0
BLAST of Cucsat.G541.T8 vs. ExPASy TrEMBL
Match: A0A1S3AXY5 (uncharacterized protein LOC103483802 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483802 PE=4 SV=1) HSP 1 Score: 524 bits (1349), Expect = 1.77e-185 Identity = 257/286 (89.86%), Postives = 271/286 (94.76%), Query Frame = 0
BLAST of Cucsat.G541.T8 vs. ExPASy TrEMBL
Match: A0A6J1GW56 (uncharacterized protein LOC111458035 OS=Cucurbita moschata OX=3662 GN=LOC111458035 PE=4 SV=1) HSP 1 Score: 523 bits (1347), Expect = 3.44e-185 Identity = 254/286 (88.81%), Postives = 273/286 (95.45%), Query Frame = 0
BLAST of Cucsat.G541.T8 vs. TAIR 10
Match: AT4G15640.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G21465.1); Has 38 Blast hits to 38 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 350.9 bits (899), Expect = 9.7e-97 Identity = 170/287 (59.23%), Postives = 216/287 (75.26%), Query Frame = 0
BLAST of Cucsat.G541.T8 vs. TAIR 10
Match: AT3G21465.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G15640.1); Has 38 Blast hits to 38 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 345.9 bits (886), Expect = 3.1e-95 Identity = 168/287 (58.54%), Postives = 210/287 (73.17%), Query Frame = 0
BLAST of Cucsat.G541.T8 vs. TAIR 10
Match: AT3G21465.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G15640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 287.7 bits (735), Expect = 1.0e-77 Identity = 132/204 (64.71%), Postives = 161/204 (78.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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