Cucsat.G5379.T2 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G5379.T2
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	E3 ubiquitin-protein ligase RGLG3-like
Location	ctg1267: 312755 .. 316292 (+)
RNA-Seq Expression	Cucsat.G5379.T2
Synteny	Cucsat.G5379.T2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCAGCCTACATGATCCGAAGTGTTATTATATATATATATAAGAAAATATTACGTTAATTCCATTTGAAAGCCCTAGATTTTTGCCCCTTTCGCGAAAACGTTCAACCTCTCCGGATCGAAAACGTTCTCCCTTCACTTCTGTTGTCGTTCAAGAACCTAGCAACACTTACACCGTCTACCGTCAACTAAGTACCAGATCCTTCACCTTCGATTGTTCGTCGCCTGCTGTCCACTGAGTACCAGAACCTAGCAACACTTCCACCATTCGACCGTTTTGTTGGTGCCTTTATGTTATCGTTGCTCAATGGTATGCTTTTATTTGATCTGGGCTAAAATCTCATGGCAACCACGAGCAAGATGACCCCAACAAGAAGGACAAGAAACAAGACCCCTCATCATCATATTGGCGATCTCTTTGAGGTCGCTGCATCTGTACTAAGAAAAAATGGTGGATCAATGCGCGTTATATTTATTGTTCAACAAGAAAAATTGCGGAGTTTCGAATGAATGGAGACGTGAAAGCCTAAAGAATATCGCCACCACGACTGGAGAATGCAAATCAAGTAATAGCGACAGCGACATTAGGTATTGTATGATTTATGTTCAACTGGCACTCATTTTTTTTTCTATAATATGGCATTTCCGCGCTATAGTTAGGTTGTTCACAAAGGAAGTATCACATGGCGGTAGGTTGTTAAGTGGGCGTTTCTATTTTATACTCTGCTTGCCTGTGTTCATTAATTTTATTTGATTATTTCTTTCAAAACTGGAGCAGATTCCAATTTATGCACTGGAATTATGTTGAAATTATATATATATATATATATATATATATATACACACATTCATCGTTACTTTACTTTAACTAAAATTAAAACAAATATATATGAAAGTTAAATCACAATAATGATAGAAGAGGGTTATTTTTTGTGCACATGTAAAGGTGTGGTTTTATGGAAAGAATTCAAAATTTAGATGAAGTACTGAATTAACACCTAAAAACATAATTCGAGTTGAATAGCTTCTTAGCAGTGCATGTACTAATTAGTTACAGTTACAAGTGTGTATATGGTAAACATTATTACACTCAAATGATCTTAATCTAACAGCCTGTTTAGAATAATACTTTACAAATACTGAAAATTACTAAAAAGAAAAAAGATGAGTTCTTAATTAGTTAGTGTTACAAAAGAAGCATTCTTGAATATTTGAAAAGTCACTCCAAACAAATCCAAGCTTTTAACCAATAGAAGGTGTTTGTATAACTTTGCCAGAAGAATCAACTAATAGCTAAACACAGTTAAATCTAAGATCAGAAGTTATGGCATAATCAGGAGGAACCACTGAAACATAAACCTCTGTCATTTCTTCTTTTATCTTCTTCTCTACCTCTTCTGTTGTCAAACTCACTAATGATGGCTATACCTTATTCTTTGGTGTCTCCGGTTGAAATAATTGCATTAGCTCCTTATAAGATTCTGTGTAATATTTGTGTGTCAATCATTTTTTTAGTACAATAATACATATTCTATAGAAAGTTGCTGCTATAGGGGTTTTAAAAAAATGGATATTAACAGGTATGGGTATTGATCATGGTGCCACATAGTTGGAGAACCACGATCATAATAGTCAGCATTCATTCTACTTTCTTTCTTTTTTTCTTTTGGAATATGCCTTCTAATTTCTGTTTGTACGTTATCCATAAACCACTGAGAGCAAAACTCCATCTCCTGGTTTTCAAAAAGAAAACATGGGTGTTCAATTGTTTTTGGTTCAGTGTGTAACTTCACGACTTCTCTCTATTGATTCAGTTTGTAAACTTCACAAAGCTCATGTCTGAGAGCATAGAAGCGTCAAAGAAGGAAGCAGCATTTGCCTTGGCCACACTCATGGAAATTCCATTTCAATACAGAGCTACCCTCTCCTTGCCAAATTCAAAGTAAGCCAGGATTTTCAACTTCAATTGAACGGTTGAAATGTCGTGTTTTTGTTATTTGGCATTCTGATTAACCAAGTAAATTAGCCTACATTGTGATTGTGTTATGTGTTATTTAAGATTTTAGGCCTAAGGTTCAAATAGTTGTCATAAAAACTCTCTAACCCTATTGATGTTTATGTAATTTGTATTATCTCATATTTTCTCTGTTAATAGCTTAATAAAACTACTATCTTCCTCAGCCCGTGGATATAGCTATGTTGATCTTTATTGTTTGCACTTTCTCGCTTTCTTTATTTGTTGATTTCGTAACAATTTCTGTTTTGGGTTTGGAAAAATAACACACTAACTATTATGCAGGAGAGAATCTGTATATGGAAAAAGTGCAGGGCCACTTCCTCCTCCTCATGAAGTCATCAATTATGACAATGCAGTTGCAAACCAAATTTTGGAGAATGCAAAAGCTGAGAAACATAGTTCCTCATCTGAATCGGTAACTTCGCTTTTATTTTATTTATGGAGTTTTCTAAGAATGAGAGAACCAAACATGTGTGGCTTTACAATTACTCTAGGAAAATTTTGTTGAAATCTGGGGTTTAAGATTGATTAAGGCAACAAGTTGTGAGAGCCTTGTCTACTGAAACAAAAGAAATTTCTCTTTTGTTTCATGACTTCATTAATATAAATTATTAATTAAATGTCTCTTGTTCAAGGTCTGCCCCATATGCCTCACAAACCCAAAGGACATGGCTTTTGCATGTGGTCATACAGTAAGTTCTCCACCTTTGAACTTCTAACAGTGCTAATGTTTGCTAATATTTTCTAATGGAATAAAAAATGTTTGAATGGTTTCATATTCGTATTACTTGGCCAAGACACTCATGAATGTTTGAATGGTTTCATATTCGTATTATTTGGTCATACAGTAGGTTTTGCTGTTAAAGTATCTTTCTAATGTTTATTTTTCCAATATATTCAACTGACCTTAATTATCCACTAATTTGAATTTTTAAGTTTGTTGATTTGATGGTGATTTTTTAGGCTGCTTCAACTATTTCACAAGCATTGCATGCTATTTTATTTTAGTCAGTATACTGAATCCATTTCTTTATGTCGATTTTTCTCTGTTATATGTTTAGAATATGTTGAAAAGAATAAATAGTACCCTAAATTTATCTTTTTGAACTTAACCTTTTAGTTGATATTTTAATGAACATTTATAATTTCACCAAGTGTTGGAGATTTTATTGGTACTTAATTTTATATTTTTATTTTTACAGACTCTGGCCTTATGTGTTTGAAGCTATTTTCTGATCGATCCATTGTAGTGATAAAGCTACGAAGCAAGTGATTGATGTTTGGTTAGTGACAAGATTTATTGTAATTTTGTTATTCATGACAATATAACCTTGTTGTATTTAGTTTCTTTGTAAAAATATATTACCCACGTTCAGTTTCTATTTTGCTTGTATTTGTCCCTTCGGAAAATTTCGATAGATTTTCTACACTTAGTTTCTTTGTAAAAATGTTATCTATGAAATCTAATGTAAAGCGTATTTCATTATGTATATGTAAAGTCTTGGAATTGAATATGTATGGTG

Coding sequence (CDS)

ATGTCTGAGAGCATAGAAGCGTCAAAGAAGGAAGCAGCATTTGCCTTGGCCACACTCATGGAAATTCCATTTCAATACAGAGCTACCCTCTCCTTGCCAAATTCAAAGAGAGAATCTGTATATGGAAAAAGTGCAGGGCCACTTCCTCCTCCTCATGAAGTCATCAATTATGACAATGCAGTTGCAAACCAAATTTTGGAGAATGCAAAAGCTGAGAAACATAGTTCCTCATCTGAATCGGTCTGCCCCATATGCCTCACAAACCCAAAGGACATGGCTTTTGCATGTGGTCATACAACTCTGGCCTTATGTGTTTGA

Protein sequence

MSESIEASKKEAAFALATLMEIPFQYRATLSLPNSKRESVYGKSAGPLPPPHEVINYDNAVANQILENAKAEKHSSSSESVCPICLTNPKDMAFACGHTTLALCV

Homology

[Close]

BLAST of Cucsat.G5379.T2 vs. ExPASy Swiss-Prot
Match: Q8RX26 (E3 ubiquitin-protein ligase RGLG3 OS=Arabidopsis thaliana OX=3702 GN=RGLG3 PE=1 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 3.0e-24
Identity = 66/108 (61.11%), Postives = 77/108 (71.30%), Query Frame = 0


Query: 1   MSESIEASKKEAAFALATLMEIPFQYRATLSLPNSKRESVYGKSAGPLPPPHEVINYDNA 60
           MSE  +A+KKEAAFALA LMEIPFQY+ATLSL N K      +   PLPPP EVI  DNA
Sbjct: 239 MSEHKDAAKKEAAFALAALMEIPFQYKATLSL-NRKPVRSSHQHHKPLPPPPEVIERDNA 298

Query: 61  ---VANQILENA-KAEKHSSSSESVCPICLTNPKDMAFACGHTTLALC 105
              V NQ+ E A K+++ + S+  VCPICLTNPKDMAF+CGHTT   C
Sbjct: 299 VRSVPNQMTETAEKSDRLAPSTVPVCPICLTNPKDMAFSCGHTTCKEC 345

[Close]

BLAST of Cucsat.G5379.T2 vs. ExPASy Swiss-Prot
Match: Q9SAL0 (E3 ubiquitin-protein ligase RGLG4 OS=Arabidopsis thaliana OX=3702 GN=RGLG4 PE=1 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 5.3e-13
Identity = 45/104 (43.27%), Postives = 56/104 (53.85%), Query Frame = 0


Query: 1   MSESIEASKKEAAFALATLMEIPFQYRATLSLPNSKRESVYGKSAGPLPPPHEVINYDNA 60
           M+ +   S KE AFALA LMEIPFQY+A + L    +++   K+  P PPP       NA
Sbjct: 281 MTRNSPESAKETAFALAALMEIPFQYQAAIELRLLGKQTGLAKTIVPRPPPIPYTPPTNA 340

Query: 61  VANQILENAKAEKHSSSSESVCPICLTNPKDMAFACGHTTLALC 105
                   A  E+  S     CPICLTN KD+AF+CGH T   C
Sbjct: 341 ELPSTASPASPEQTQS-----CPICLTNRKDVAFSCGHMTCGDC 379

[Close]

BLAST of Cucsat.G5379.T2 vs. ExPASy Swiss-Prot
Match: Q8LB88 (E3 ubiquitin-protein ligase RGLG5 OS=Arabidopsis thaliana OX=3702 GN=RGLG5 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.3e-11
Identity = 44/122 (36.07%), Postives = 62/122 (50.82%), Query Frame = 0


Query: 1   MSESIEASKKEAAFALATLMEIPFQYRATLSLPNSKRESVYGKSAGPLPPPHEVIN---- 60
           MS++I+ ++KEA FAL+ LMEIP QY+ATL L    + + +      LPPP         
Sbjct: 295 MSKNIDPARKEAEFALSALMEIPSQYKATLELGLLGQRTGHCPDRIALPPPTYATQSMRN 354

Query: 61  --------------YDNAVANQILENAKAEKHSSSSESVCPICLTNPKDMAFACGHTTLA 105
                         YDN V++       +  H+ S +  CP+CL + K+MAF CGH T A
Sbjct: 355 SPRTSRSTSFQNKPYDNGVSS----TPPSTTHNESQQQFCPVCLVSAKNMAFNCGHQTCA 412

[Close]

BLAST of Cucsat.G5379.T2 vs. ExPASy Swiss-Prot
Match: Q9SS90 (E3 ubiquitin-protein ligase RGLG1 OS=Arabidopsis thaliana OX=3702 GN=RGLG1 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 3.8e-11
Identity = 45/115 (39.13%), Postives = 63/115 (54.78%), Query Frame = 0


Query: 1   MSESIEASKKEAAFALATLMEIPFQYRATLSLPNSKRESVYGKSAGPLPPP--------- 60
           MS++ + S+KE  FAL+ LMEIP QY+AT+ L      +       PLPPP         
Sbjct: 358 MSKNKDQSRKETEFALSALMEIPPQYKATIELNLLGVRNGNIPQRIPLPPPVQSGSSFSS 417

Query: 61  HEVINYDNAVANQILENAKAEKHSSSSESV--CPICLTNPKDMAFACGHTTLALC 105
             + N++ +V     E+    K  SS++ +  CPICL+NPK+MAF CGH T   C
Sbjct: 418 SRIPNFEPSVPPYPFES----KQMSSADDIQLCPICLSNPKNMAFGCGHQTCCEC 468

[Close]

BLAST of Cucsat.G5379.T2 vs. ExPASy Swiss-Prot
Match: Q9LY87 (E3 ubiquitin-protein ligase RGLG2 OS=Arabidopsis thaliana OX=3702 GN=RGLG2 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 8.4e-11
Identity = 45/124 (36.29%), Postives = 59/124 (47.58%), Query Frame = 0


Query: 1   MSESIEASKKEAAFALATLMEIPFQYRATLSLPNSKRESVYGKSAGPLPP---------- 60
           M+++   S KE  FAL+ LMEIP QY+AT+ L    R + Y     PLPP          
Sbjct: 324 MAKNKAQSLKETEFALSALMEIPQQYKATIELNLLGRRNGYIPERFPLPPPMRGGSSSYN 383

Query: 61  ---PHEVINYDNAVANQILENAKAEK-------HSSSSESVCPICLTNPKDMAFACGHTT 105
              P  + ++  +V     E              S+S   +CPICL+NPKDMAF CGH T
Sbjct: 384 SPKPSRLPSFKPSVPPHPTEGYHVRSSPVPPPTSSASDNQLCPICLSNPKDMAFGCGHQT 443

[Close]

BLAST of Cucsat.G5379.T2 vs. NCBI nr
Match: XP_031739618.1 (E3 ubiquitin-protein ligase RGLG3-like [Cucumis sativus])

HSP 1 Score: 201 bits (510), Expect = 1.17e-64
Identity = 104/109 (95.41%), Postives = 104/109 (95.41%), Query Frame = 0


Query: 1   MSESIEASKKEAAFALATLMEIPFQYRATLSLPNSK----RESVYGKSAGPLPPPHEVIN 60
           MSESIEASKKEAAFALATLMEIPFQYRATLSLPNSK    RESVYGKSAGPLPPP EVIN
Sbjct: 1   MSESIEASKKEAAFALATLMEIPFQYRATLSLPNSKLLCRRESVYGKSAGPLPPPPEVIN 60

Query: 61  YDNAVANQILENAKAEKHSSSSESVCPICLTNPKDMAFACGHTTLALCV 105
           YDNAVANQILENAKAEKHSSSSESVCPICLTNPKDMAFACGHTTLALCV
Sbjct: 61  YDNAVANQILENAKAEKHSSSSESVCPICLTNPKDMAFACGHTTLALCV 109

[Close]

BLAST of Cucsat.G5379.T2 vs. NCBI nr
Match: XP_031743945.1 (E3 ubiquitin-protein ligase RGLG3 isoform X1 [Cucumis sativus] >XP_031743946.1 E3 ubiquitin-protein ligase RGLG3 isoform X1 [Cucumis sativus] >XP_031743947.1 E3 ubiquitin-protein ligase RGLG3 isoform X1 [Cucumis sativus] >KGN48601.2 hypothetical protein Csa_003697 [Cucumis sativus])

HSP 1 Score: 191 bits (485), Expect = 1.62e-57
Identity = 96/104 (92.31%), Postives = 98/104 (94.23%), Query Frame = 0


Query: 1   MSESIEASKKEAAFALATLMEIPFQYRATLSLPNSKRESVYGKSAGPLPPPHEVINYDNA 60
           MSES EASKKEAAFALA LMEIPFQYRATLSLPNSKRESVYGKSAGPLPPP EVIN+DNA
Sbjct: 239 MSESTEASKKEAAFALAALMEIPFQYRATLSLPNSKRESVYGKSAGPLPPPPEVINHDNA 298

Query: 61  VANQILENAKAEKHSSSSESVCPICLTNPKDMAFACGHTTLALC 104
           VANQILEN+KAEKHSSSSESVCPICLTNPKDMAFACGHTT   C
Sbjct: 299 VANQILENSKAEKHSSSSESVCPICLTNPKDMAFACGHTTCKDC 342

[Close]

BLAST of Cucsat.G5379.T2 vs. NCBI nr
Match: TYK07466.1 (E3 ubiquitin-protein ligase RGLG1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 182 bits (463), Expect = 8.58e-56
Identity = 92/104 (88.46%), Postives = 96/104 (92.31%), Query Frame = 0


Query: 1   MSESIEASKKEAAFALATLMEIPFQYRATLSLPNSKRESVYGKSAGPLPPPHEVINYDNA 60
           MSES +ASKKEAAFALA LMEIPFQYRATLSLPNSKRES+YGKSAGPLPPP EVIN+DNA
Sbjct: 108 MSESADASKKEAAFALAALMEIPFQYRATLSLPNSKRESIYGKSAGPLPPPPEVINHDNA 167

Query: 61  VANQILENAKAEKHSSSSESVCPICLTNPKDMAFACGHTTLALC 104
           VA Q LE+AKAEKHSSSSESVCPICLTNPKDMAFACGHTT   C
Sbjct: 168 VAIQNLEHAKAEKHSSSSESVCPICLTNPKDMAFACGHTTCKDC 211

[Close]

BLAST of Cucsat.G5379.T2 vs. NCBI nr
Match: KAA0025200.1 (E3 ubiquitin-protein ligase RGLG1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 182 bits (463), Expect = 8.84e-56
Identity = 92/104 (88.46%), Postives = 96/104 (92.31%), Query Frame = 0


Query: 1   MSESIEASKKEAAFALATLMEIPFQYRATLSLPNSKRESVYGKSAGPLPPPHEVINYDNA 60
           MSES +ASKKEAAFALA LMEIPFQYRATLSLPNSKRES+YGKSAGPLPPP EVIN+DNA
Sbjct: 109 MSESADASKKEAAFALAALMEIPFQYRATLSLPNSKRESIYGKSAGPLPPPPEVINHDNA 168

Query: 61  VANQILENAKAEKHSSSSESVCPICLTNPKDMAFACGHTTLALC 104
           VA Q LE+AKAEKHSSSSESVCPICLTNPKDMAFACGHTT   C
Sbjct: 169 VAIQNLEHAKAEKHSSSSESVCPICLTNPKDMAFACGHTTCKDC 212

[Close]

BLAST of Cucsat.G5379.T2 vs. NCBI nr
Match: XP_008462648.1 (PREDICTED: E3 ubiquitin-protein ligase RGLG1 isoform X2 [Cucumis melo])

HSP 1 Score: 182 bits (463), Expect = 2.05e-54
Identity = 92/104 (88.46%), Postives = 96/104 (92.31%), Query Frame = 0


Query: 1   MSESIEASKKEAAFALATLMEIPFQYRATLSLPNSKRESVYGKSAGPLPPPHEVINYDNA 60
           MSES +ASKKEAAFALA LMEIPFQYRATLSLPNSKRES+YGKSAGPLPPP EVIN+DNA
Sbjct: 221 MSESADASKKEAAFALAALMEIPFQYRATLSLPNSKRESIYGKSAGPLPPPPEVINHDNA 280

Query: 61  VANQILENAKAEKHSSSSESVCPICLTNPKDMAFACGHTTLALC 104
           VA Q LE+AKAEKHSSSSESVCPICLTNPKDMAFACGHTT   C
Sbjct: 281 VAIQNLEHAKAEKHSSSSESVCPICLTNPKDMAFACGHTTCKDC 324

[Close]

BLAST of Cucsat.G5379.T2 vs. ExPASy TrEMBL
Match: A0A5D3CAU1 (E3 ubiquitin-protein ligase RGLG1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G001970 PE=4 SV=1)

HSP 1 Score: 182 bits (463), Expect = 4.15e-56
Identity = 92/104 (88.46%), Postives = 96/104 (92.31%), Query Frame = 0


Query: 1   MSESIEASKKEAAFALATLMEIPFQYRATLSLPNSKRESVYGKSAGPLPPPHEVINYDNA 60
           MSES +ASKKEAAFALA LMEIPFQYRATLSLPNSKRES+YGKSAGPLPPP EVIN+DNA
Sbjct: 108 MSESADASKKEAAFALAALMEIPFQYRATLSLPNSKRESIYGKSAGPLPPPPEVINHDNA 167

Query: 61  VANQILENAKAEKHSSSSESVCPICLTNPKDMAFACGHTTLALC 104
           VA Q LE+AKAEKHSSSSESVCPICLTNPKDMAFACGHTT   C
Sbjct: 168 VAIQNLEHAKAEKHSSSSESVCPICLTNPKDMAFACGHTTCKDC 211

[Close]

BLAST of Cucsat.G5379.T2 vs. ExPASy TrEMBL
Match: A0A5A7SGD8 (E3 ubiquitin-protein ligase RGLG1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G00460 PE=4 SV=1)

HSP 1 Score: 182 bits (463), Expect = 4.28e-56
Identity = 92/104 (88.46%), Postives = 96/104 (92.31%), Query Frame = 0


Query: 1   MSESIEASKKEAAFALATLMEIPFQYRATLSLPNSKRESVYGKSAGPLPPPHEVINYDNA 60
           MSES +ASKKEAAFALA LMEIPFQYRATLSLPNSKRES+YGKSAGPLPPP EVIN+DNA
Sbjct: 109 MSESADASKKEAAFALAALMEIPFQYRATLSLPNSKRESIYGKSAGPLPPPPEVINHDNA 168

Query: 61  VANQILENAKAEKHSSSSESVCPICLTNPKDMAFACGHTTLALC 104
           VA Q LE+AKAEKHSSSSESVCPICLTNPKDMAFACGHTT   C
Sbjct: 169 VAIQNLEHAKAEKHSSSSESVCPICLTNPKDMAFACGHTTCKDC 212

[Close]

BLAST of Cucsat.G5379.T2 vs. ExPASy TrEMBL
Match: A0A1S3CHE4 (E3 ubiquitin-protein ligase RGLG1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500954 PE=4 SV=1)

HSP 1 Score: 182 bits (463), Expect = 9.95e-55
Identity = 92/104 (88.46%), Postives = 96/104 (92.31%), Query Frame = 0


Query: 1   MSESIEASKKEAAFALATLMEIPFQYRATLSLPNSKRESVYGKSAGPLPPPHEVINYDNA 60
           MSES +ASKKEAAFALA LMEIPFQYRATLSLPNSKRES+YGKSAGPLPPP EVIN+DNA
Sbjct: 221 MSESADASKKEAAFALAALMEIPFQYRATLSLPNSKRESIYGKSAGPLPPPPEVINHDNA 280

Query: 61  VANQILENAKAEKHSSSSESVCPICLTNPKDMAFACGHTTLALC 104
           VA Q LE+AKAEKHSSSSESVCPICLTNPKDMAFACGHTT   C
Sbjct: 281 VAIQNLEHAKAEKHSSSSESVCPICLTNPKDMAFACGHTTCKDC 324

[Close]

BLAST of Cucsat.G5379.T2 vs. ExPASy TrEMBL
Match: A0A1S3CHF5 (E3 ubiquitin-protein ligase RGLG1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500954 PE=4 SV=1)

HSP 1 Score: 182 bits (463), Expect = 1.57e-54
Identity = 92/104 (88.46%), Postives = 96/104 (92.31%), Query Frame = 0


Query: 1   MSESIEASKKEAAFALATLMEIPFQYRATLSLPNSKRESVYGKSAGPLPPPHEVINYDNA 60
           MSES +ASKKEAAFALA LMEIPFQYRATLSLPNSKRES+YGKSAGPLPPP EVIN+DNA
Sbjct: 239 MSESADASKKEAAFALAALMEIPFQYRATLSLPNSKRESIYGKSAGPLPPPPEVINHDNA 298

Query: 61  VANQILENAKAEKHSSSSESVCPICLTNPKDMAFACGHTTLALC 104
           VA Q LE+AKAEKHSSSSESVCPICLTNPKDMAFACGHTT   C
Sbjct: 299 VAIQNLEHAKAEKHSSSSESVCPICLTNPKDMAFACGHTTCKDC 342

[Close]

BLAST of Cucsat.G5379.T2 vs. ExPASy TrEMBL
Match: A0A6J1KVY2 (E3 ubiquitin-protein ligase RGLG3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111496913 PE=4 SV=1)

HSP 1 Score: 163 bits (413), Expect = 1.89e-47
Identity = 85/104 (81.73%), Postives = 88/104 (84.62%), Query Frame = 0


Query: 1   MSESIEASKKEAAFALATLMEIPFQYRATLSLPNSKRESVYGKSAGPLPPPHEVINYDNA 60
           MSES E SKKEAAFALA LMEIPFQYRATLSL  SKRESVY KSAGP+PPP EVIN+DNA
Sbjct: 201 MSESKEESKKEAAFALAALMEIPFQYRATLSLQYSKRESVYSKSAGPVPPPPEVINHDNA 260

Query: 61  VANQILENAKAEKHSSSSESVCPICLTNPKDMAFACGHTTLALC 104
           VANQ L  A AE+ SSSSESVCPIC TNPKDMAFACGHTT   C
Sbjct: 261 VANQNLIKANAERQSSSSESVCPICQTNPKDMAFACGHTTCKDC 304

[Close]

BLAST of Cucsat.G5379.T2 vs. TAIR 10
Match: AT5G63970.1 (Copine (Calcium-dependent phospholipid-binding protein) family )

HSP 1 Score: 112.5 bits (280), Expect = 2.1e-25
Identity = 66/108 (61.11%), Postives = 77/108 (71.30%), Query Frame = 0


Query: 1   MSESIEASKKEAAFALATLMEIPFQYRATLSLPNSKRESVYGKSAGPLPPPHEVINYDNA 60
           MSE  +A+KKEAAFALA LMEIPFQY+ATLSL N K      +   PLPPP EVI  DNA
Sbjct: 239 MSEHKDAAKKEAAFALAALMEIPFQYKATLSL-NRKPVRSSHQHHKPLPPPPEVIERDNA 298

Query: 61  ---VANQILENA-KAEKHSSSSESVCPICLTNPKDMAFACGHTTLALC 105
              V NQ+ E A K+++ + S+  VCPICLTNPKDMAF+CGHTT   C
Sbjct: 299 VRSVPNQMTETAEKSDRLAPSTVPVCPICLTNPKDMAFSCGHTTCKEC 345

[Close]

BLAST of Cucsat.G5379.T2 vs. TAIR 10
Match: AT5G63970.2 (Copine (Calcium-dependent phospholipid-binding protein) family )

HSP 1 Score: 112.5 bits (280), Expect = 2.1e-25
Identity = 66/108 (61.11%), Postives = 77/108 (71.30%), Query Frame = 0


Query: 1   MSESIEASKKEAAFALATLMEIPFQYRATLSLPNSKRESVYGKSAGPLPPPHEVINYDNA 60
           MSE  +A+KKEAAFALA LMEIPFQY+ATLSL N K      +   PLPPP EVI  DNA
Sbjct: 239 MSEHKDAAKKEAAFALAALMEIPFQYKATLSL-NRKPVRSSHQHHKPLPPPPEVIERDNA 298

Query: 61  ---VANQILENA-KAEKHSSSSESVCPICLTNPKDMAFACGHTTLALC 105
              V NQ+ E A K+++ + S+  VCPICLTNPKDMAF+CGHTT   C
Sbjct: 299 VRSVPNQMTETAEKSDRLAPSTVPVCPICLTNPKDMAFSCGHTTCKEC 345

[Close]

BLAST of Cucsat.G5379.T2 vs. TAIR 10
Match: AT1G79380.1 (Ca(2)-dependent phospholipid-binding protein (Copine) family )

HSP 1 Score: 75.1 bits (183), Expect = 3.8e-14
Identity = 45/104 (43.27%), Postives = 56/104 (53.85%), Query Frame = 0


Query: 1   MSESIEASKKEAAFALATLMEIPFQYRATLSLPNSKRESVYGKSAGPLPPPHEVINYDNA 60
           M+ +   S KE AFALA LMEIPFQY+A + L    +++   K+  P PPP       NA
Sbjct: 281 MTRNSPESAKETAFALAALMEIPFQYQAAIELRLLGKQTGLAKTIVPRPPPIPYTPPTNA 340

Query: 61  VANQILENAKAEKHSSSSESVCPICLTNPKDMAFACGHTTLALC 105
                   A  E+  S     CPICLTN KD+AF+CGH T   C
Sbjct: 341 ELPSTASPASPEQTQS-----CPICLTNRKDVAFSCGHMTCGDC 379

[Close]

BLAST of Cucsat.G5379.T2 vs. TAIR 10
Match: AT1G67800.1 (Copine (Calcium-dependent phospholipid-binding protein) family )

HSP 1 Score: 70.5 bits (171), Expect = 9.3e-13
Identity = 44/122 (36.07%), Postives = 62/122 (50.82%), Query Frame = 0


Query: 1   MSESIEASKKEAAFALATLMEIPFQYRATLSLPNSKRESVYGKSAGPLPPPHEVIN---- 60
           MS++I+ ++KEA FAL+ LMEIP QY+ATL L    + + +      LPPP         
Sbjct: 295 MSKNIDPARKEAEFALSALMEIPSQYKATLELGLLGQRTGHCPDRIALPPPTYATQSMRN 354

Query: 61  --------------YDNAVANQILENAKAEKHSSSSESVCPICLTNPKDMAFACGHTTLA 105
                         YDN V++       +  H+ S +  CP+CL + K+MAF CGH T A
Sbjct: 355 SPRTSRSTSFQNKPYDNGVSS----TPPSTTHNESQQQFCPVCLVSAKNMAFNCGHQTCA 412

[Close]

BLAST of Cucsat.G5379.T2 vs. TAIR 10
Match: AT1G67800.2 (Copine (Calcium-dependent phospholipid-binding protein) family )

HSP 1 Score: 70.5 bits (171), Expect = 9.3e-13
Identity = 44/122 (36.07%), Postives = 62/122 (50.82%), Query Frame = 0


Query: 1   MSESIEASKKEAAFALATLMEIPFQYRATLSLPNSKRESVYGKSAGPLPPPHEVIN---- 60
           MS++I+ ++KEA FAL+ LMEIP QY+ATL L    + + +      LPPP         
Sbjct: 315 MSKNIDPARKEAEFALSALMEIPSQYKATLELGLLGQRTGHCPDRIALPPPTYATQSMRN 374

Query: 61  --------------YDNAVANQILENAKAEKHSSSSESVCPICLTNPKDMAFACGHTTLA 105
                         YDN V++       +  H+ S +  CP+CL + K+MAF CGH T A
Sbjct: 375 SPRTSRSTSFQNKPYDNGVSS----TPPSTTHNESQQQFCPVCLVSAKNMAFNCGHQTCA 432

The following BLAST results are available for this feature:

BLAST of Cucsat.G5379.T2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RX26	3.0e-24	61.11	E3 ubiquitin-protein ligase RGLG3 OS=Arabidopsis thaliana OX=3702 GN=RGLG3 PE=1 ...	[more]
Q9SAL0	5.3e-13	43.27	E3 ubiquitin-protein ligase RGLG4 OS=Arabidopsis thaliana OX=3702 GN=RGLG4 PE=1 ...	[more]
Q8LB88	1.3e-11	36.07	E3 ubiquitin-protein ligase RGLG5 OS=Arabidopsis thaliana OX=3702 GN=RGLG5 PE=1 ...	[more]
Q9SS90	3.8e-11	39.13	E3 ubiquitin-protein ligase RGLG1 OS=Arabidopsis thaliana OX=3702 GN=RGLG1 PE=1 ...	[more]
Q9LY87	8.4e-11	36.29	E3 ubiquitin-protein ligase RGLG2 OS=Arabidopsis thaliana OX=3702 GN=RGLG2 PE=1 ...	[more]

BLAST of Cucsat.G5379.T2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031739618.1	1.17e-64	95.41	E3 ubiquitin-protein ligase RGLG3-like [Cucumis sativus]	[more]
XP_031743945.1	1.62e-57	92.31	E3 ubiquitin-protein ligase RGLG3 isoform X1 [Cucumis sativus] >XP_031743946.1 E...	[more]
TYK07466.1	8.58e-56	88.46	E3 ubiquitin-protein ligase RGLG1 isoform X1 [Cucumis melo var. makuwa]	[more]
KAA0025200.1	8.84e-56	88.46	E3 ubiquitin-protein ligase RGLG1 isoform X1 [Cucumis melo var. makuwa]	[more]
XP_008462648.1	2.05e-54	88.46	PREDICTED: E3 ubiquitin-protein ligase RGLG1 isoform X2 [Cucumis melo]	[more]

BLAST of Cucsat.G5379.T2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CAU1	4.15e-56	88.46	E3 ubiquitin-protein ligase RGLG1 isoform X1 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A5A7SGD8	4.28e-56	88.46	E3 ubiquitin-protein ligase RGLG1 isoform X1 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A1S3CHE4	9.95e-55	88.46	E3 ubiquitin-protein ligase RGLG1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10350...	[more]
A0A1S3CHF5	1.57e-54	88.46	E3 ubiquitin-protein ligase RGLG1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10350...	[more]
A0A6J1KVY2	1.89e-47	81.73	E3 ubiquitin-protein ligase RGLG3-like isoform X2 OS=Cucurbita maxima OX=3661 GN...	[more]

BLAST of Cucsat.G5379.T2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G63970.1	2.1e-25	61.11	Copine (Calcium-dependent phospholipid-binding protein) family	[more]
AT5G63970.2	2.1e-25	61.11	Copine (Calcium-dependent phospholipid-binding protein) family	[more]
AT1G79380.1	3.8e-14	43.27	Ca(2)-dependent phospholipid-binding protein (Copine) family	[more]
AT1G67800.1	9.3e-13	36.07	Copine (Calcium-dependent phospholipid-binding protein) family	[more]
AT1G67800.2	9.3e-13	36.07	Copine (Calcium-dependent phospholipid-binding protein) family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR45751	COPINE FAMILY PROTEIN 1	coord: 1..104
None	No IPR available	PANTHER	PTHR45751:SF32	BNAA02G33980D PROTEIN	coord: 1..104

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G5379	Cucsat.G5379	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G5379.T2.E1	Cucsat.G5379.T2.E1	exon
Cucsat.G5379.T2.E2	Cucsat.G5379.T2.E2	exon
Cucsat.G5379.T2.E3	Cucsat.G5379.T2.E3	exon
Cucsat.G5379.T2.E4	Cucsat.G5379.T2.E4	exon
Cucsat.G5379.T2.E5	Cucsat.G5379.T2.E5	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G5379.T2.C1	Cucsat.G5379.T2.C1	CDS
Cucsat.G5379.T2.C2	Cucsat.G5379.T2.C2	CDS
Cucsat.G5379.T2.C3	Cucsat.G5379.T2.C3	CDS
Cucsat.G5379.T2.C4	Cucsat.G5379.T2.C4	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G5379.T2	Cucsat.G5379.T2-protein	polypeptide