Cucsat.G4962.T5 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AGGAGTGTGAAGCTTTTCTCGCTTGTCTCACACGTCTAATGATCAATGCATTAATAAATTGGAGTTGGCTACCAGCCAACCCTAATTTTCCATAGTGCGACTTCGTCGTGTCAATACGCTACACCCATTCGTCATCACAACTCTTTTGAGGATTGGATTAACAATTCCACCACGGTTGTGATTCTGTCGCAACGTGATCATTATGAATAATTTAATACTCAGTGGGATCAGTTCTTTAACAATGGAGTTCGCTAATGCTCTCATTAATGGCGAAACTAATTACCCTTTTCATTATTGTACTGACATCTCATACCCGTTGCCCGCCACACTTCAATTGGGACTCAATTTAAAGGAGGGACCAAACAGGGATTCAAATTGGTTACCTAATTTGTTCACCAACTCTCTGAGCTTACGATTTCTTAGAGGGTATCGGGTTTTAGTGAAATTTTAGGGTTAGAAGAGAGGATTGAGGAGAAATGAAGGTACCCAGGAGGCCGATTCATGCAATTACGTCATGGGTTCGGAGGCAACCCCCGAAGATGAAAGCGTTTTTAGGAGTAGCGTCTGCGATTATTTCTCTTGTTCTTCTCTATGTGATGGTTCATGATCACAACAAGCTCTTTGTGGCCGCTGAGGCTGTTCATGCCATTGGAATTGCGGTTCTTATTTATAAGCTCATGAAGGAGAGGAGTTGTGCAGGTGTAATCTTGATGTCTTTTAGTTTGAATTTCTCTTTATTTTCTTGGTTTTGAGCTCTTAGTCCGTTTCTTTCTGGTTCTGATTAATCACTGTTACTTGCTTGAGTTTCTTTCGAGCTTGATATTAACTATCTAAAGTTGGAATTGAATTGGTTCTTTCGGATTTTGATGTTTAGTTGGATCAGCTTCTTAGTTTTGTTTAGCTTCTGGTTGTTATTTCCGATTTTGATGTTTGAGTTTGGCCATTGATCTGGATTGAGCTTTACTTCAACAATTTAGAGTAAGCTTAAGTTCTATATCCTTTTATTTTATTTTTCTTCAGGTCTTTCGCTCAAGTCGCAGGAATTAACGGCTTATTTTCTAGCTGCAAGACTCTATTGCAGCTTTGTGATCGAATATGATGTGCACACATTTCTTGATTTGGCTACTTTAGTAGCAACTCTTTGGGTCATTTACATGATTCGTTATAAGCTCAAAGCCAGCTACATGGGAGACAAAGATAACTTCAAAGTTCTATACTTGGTGAGTCTACTTCTTTTACTTGGGTTCTTCATCAAGTTCATCAGGATTGTGTTGTATTTATGCACTGAATTTAACTAATTCCAAAAATGGATTGATTTTCTTTCTTTGCCGAATTTTGGGTTACGTTTTGAAGCAAATCTACAAATCTGATTTCTTTGGGATGAGTGCCTATATGTTTCACAATTCATGTCAGTGTTCATCTTTGAGATCTCTGTTTATTGAAAATCAGTGGGATAATGCTGAATGAAGGCTTCCTTTTTGACAGTTTCTATAAATGTTTCAATATGCCTTTTAGGCTTAAGTCTTGAAGCCCAAATTTATAGCCTCCAAGCTCGAACTTTGAGAATGCATTCCAACATTTTCTGAGAAGAATTGAAACACACACACACACAGGGGCCTACAAAATGGCTTGAGACATATTTCATAAAAGAAAAGGAAAACCAAACTTTCATCAAGAATGCATTGAGACATTTCATCAACAAAGAAAAAAATTCTGCTACTGATGGTTAATTGCAAACGATTCTGAATTGGCTTGGAGAAACTTGAGTGCTTAAAAAATATGTTCAATTCTCGATGATGTTTAACCTATACCTGTTTCATAACTGTATTCATTGTATTATTATTCTTGGATACAGGTGGTACCATGTATTTTACTATCCATTTTGATTCACCCGACACCTCCAAGAGTTTCTTTGTTACAAAGAATTTTCTGGGCTTTTTGTGTTTACCTTGAAGCTGTTTCGGTTCTACCTCAGTTGCGAGTCATGCAGAACATAAAGGTTCCTCTTCCCTTTATTTCTTTTCTACTTCTGTTTATGTTCCCGTTCTTTCAGTTTTTCTCATTGGAAGGTTTGTTTATCATTAAAAAAAAAAAAGTGACAATTGATTTTATTCTTCCGTATGTTCCTTATTAGAAAATTGTCCAACTAATCAACAAATTGTATGAAATTCAAATTAAAAAACACGTTAAATCATGGGATAACAACCACCACCATAAATGGGACTGGGTTCTAATAAGAGCTCACGTAAATAGAAAAAGGATTAGGATGAGTTTGAGTTATGGATTTGATATCGTAATACTTTCTTTGGTGATCAAATGTAGTAGGATCAACTCGTTGTCTAGTTAAAAATAGTCAAAGTGGTGCAAGCTAATTCAAATACTCACATATGTGAAGTCAAGAGAACATCTAAACCATATTATGAAAAGTTTCTAAATTTTGCTAAACTACATAACCAAATTGGTAAAAGAATACGTAAACTCAAGGGAGGAAAACCACCAATGCTCACGTAGTACTCGATATCAGCCATTTAGGGCTAAGTTTGATAAAGTTGAAAGTAAAAGGTTACAATTGTATTATCTCATTAAGTCTAAGGTAAAAAGATGAATTCCTCAAAAAAGAATTCTGCTTGGGGTGGCCGAGTAGAAAGTTCAGAATTATTTATATTTAACTTTTGTTTTTCTTTTTATACTCTCTTAAATTTTGTATTCCTTTCGTTTATTGTCCAGATCGTTGAGCCATTCACTGCACACTATGTATTTGCCTTGGGGGTTGCCAGATTCCTGAGCTGTGCGCATTGGATTCTTCAGGTTTTTCCTTGAATTTCAAACTTCATATGTTGCATTTGTACCTGTAGATTTTAAAAATTGTTCAATTGTTTTGGTAGTGAGCTTTTATTCATTTCTTTCAAAAATCTGATTTTGATCCCAAAAATTTTATGTGCTTTATCTTATCCT ATGAAGGTACCCAGGAGGCCGATTCATGCAATTACGTCATGGGTTCGGAGGCAACCCCCGAAGATGAAAGCGTTTTTAGGAGTAGCGTCTGCGATTATTTCTCTTGTTCTTCTCTATGTGATGGTTCATGATCACAACAAGCTCTTTGTGGCCGCTGAGGCTGTTCATGCCATTGGAATTGCGGTTCTTATTTATAAGCTCATGAAGGAGAGGAGTTGTGCAGGTCTTTCGCTCAAGTCGCAGGAATTAACGGCTTATTTTCTAGCTGCAAGACTCTATTGCAGCTTTGTGATCGAATATGATGTGCACACATTTCTTGATTTGGCTACTTTAGTAGCAACTCTTTGGGTCATTTACATGATTCGTTATAAGCTCAAAGCCAGCTACATGGGAGACAAAGATAACTTCAAAGTTCTATACTTGGTGGTACCATGTATTTTACTATCCATTTTGATTCACCCGACACCTCCAAGAGTTTCTTTGTTACAAAGAATTTTCTGGGCTTTTTGTGTTTACCTTGAAGCTGTTTCGGTTCTACCTCAGTTGCGAGTCATGCAGAACATAAAGATCGTTGAGCCATTCACTGCACACTATGTATTTGCCTTGGGGGTTGCCAGATTCCTGAGCTGTGCGCATTGGATTCTTCAGGTTTTTCCTTGA MKVPRRPIHAITSWVRRQPPKMKAFLGVASAIISLVLLYVMVHDHNKLFVAAEAVHAIGIAVLIYKLMKERSCAGLSLKSQELTAYFLAARLYCSFVIEYDVHTFLDLATLVATLWVIYMIRYKLKASYMGDKDNFKVLYLVVPCILLSILIHPTPPRVSLLQRIFWAFCVYLEAVSVLPQLRVMQNIKIVEPFTAHYVFALGVARFLSCAHWILQVFP Homology
BLAST of Cucsat.G4962.T5 vs. ExPASy Swiss-Prot
Match: Q09473 (ER lumen protein-retaining receptor erd-2.2 OS=Caenorhabditis elegans OX=6239 GN=erd-2.2 PE=3 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 1.5e-22 Identity = 63/172 (36.63%), Postives = 104/172 (60.47%), Query Frame = 0
BLAST of Cucsat.G4962.T5 vs. ExPASy Swiss-Prot
Match: P48583 (ER lumen protein-retaining receptor erd-2.1 OS=Caenorhabditis elegans OX=6239 GN=erd-2.1 PE=3 SV=2) HSP 1 Score: 107.5 bits (267), Expect = 2.0e-22 Identity = 62/170 (36.47%), Postives = 101/170 (59.41%), Query Frame = 0
BLAST of Cucsat.G4962.T5 vs. ExPASy Swiss-Prot
Match: Q611C8 (ER lumen protein-retaining receptor OS=Caenorhabditis briggsae OX=6238 GN=erd-2 PE=3 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 7.6e-22 Identity = 57/170 (33.53%), Postives = 98/170 (57.65%), Query Frame = 0
BLAST of Cucsat.G4962.T5 vs. ExPASy Swiss-Prot
Match: Q6PAB8 (ER lumen protein-retaining receptor 1-A OS=Xenopus laevis OX=8355 GN=kdelr1-a PE=2 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 2.9e-21 Identity = 65/164 (39.63%), Postives = 97/164 (59.15%), Query Frame = 0
BLAST of Cucsat.G4962.T5 vs. ExPASy Swiss-Prot
Match: Q68ES4 (ER lumen protein-retaining receptor 1-B OS=Xenopus laevis OX=8355 GN=kdelr1-b PE=2 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 6.4e-21 Identity = 65/164 (39.63%), Postives = 95/164 (57.93%), Query Frame = 0
BLAST of Cucsat.G4962.T5 vs. NCBI nr
Match: XP_004152650.1 (ER lumen protein-retaining receptor erd-2.2 [Cucumis sativus] >KGN62676.1 hypothetical protein Csa_022026 [Cucumis sativus]) HSP 1 Score: 418 bits (1075), Expect = 2.63e-146 Identity = 216/217 (99.54%), Postives = 217/217 (100.00%), Query Frame = 0
BLAST of Cucsat.G4962.T5 vs. NCBI nr
Match: KAA0065166.1 (putative ER lumen protein-retaining receptor C28H8.4 [Cucumis melo var. makuwa]) HSP 1 Score: 417 bits (1071), Expect = 1.07e-145 Identity = 214/217 (98.62%), Postives = 217/217 (100.00%), Query Frame = 0
BLAST of Cucsat.G4962.T5 vs. NCBI nr
Match: XP_008444804.1 (PREDICTED: putative ER lumen protein-retaining receptor C28H8.4 [Cucumis melo]) HSP 1 Score: 414 bits (1063), Expect = 1.77e-144 Identity = 213/217 (98.16%), Postives = 216/217 (99.54%), Query Frame = 0
BLAST of Cucsat.G4962.T5 vs. NCBI nr
Match: XP_038886586.1 (ER lumen protein-retaining receptor erd-2.2-like [Benincasa hispida]) HSP 1 Score: 406 bits (1044), Expect = 1.39e-141 Identity = 207/217 (95.39%), Postives = 214/217 (98.62%), Query Frame = 0
BLAST of Cucsat.G4962.T5 vs. NCBI nr
Match: XP_022961664.1 (putative ER lumen protein-retaining receptor C28H8.4 [Cucurbita moschata] >XP_023547199.1 putative ER lumen protein-retaining receptor C28H8.4 [Cucurbita pepo subsp. pepo] >KAG6598499.1 ER lumen protein-retaining receptor, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029435.1 ER lumen protein-retaining receptor [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 395 bits (1016), Expect = 2.55e-137 Identity = 203/217 (93.55%), Postives = 210/217 (96.77%), Query Frame = 0
BLAST of Cucsat.G4962.T5 vs. ExPASy TrEMBL
Match: A0A0A0LRN5 (ER lumen protein retaining receptor family protein OS=Cucumis sativus OX=3659 GN=Csa_2G368280 PE=3 SV=1) HSP 1 Score: 418 bits (1075), Expect = 1.27e-146 Identity = 216/217 (99.54%), Postives = 217/217 (100.00%), Query Frame = 0
BLAST of Cucsat.G4962.T5 vs. ExPASy TrEMBL
Match: A0A5A7VFR1 (Putative ER lumen protein-retaining receptor C28H8.4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005020 PE=3 SV=1) HSP 1 Score: 417 bits (1071), Expect = 5.17e-146 Identity = 214/217 (98.62%), Postives = 217/217 (100.00%), Query Frame = 0
BLAST of Cucsat.G4962.T5 vs. ExPASy TrEMBL
Match: A0A1S3BAQ8 (putative ER lumen protein-retaining receptor C28H8.4 OS=Cucumis melo OX=3656 GN=LOC103488042 PE=3 SV=1) HSP 1 Score: 414 bits (1063), Expect = 8.56e-145 Identity = 213/217 (98.16%), Postives = 216/217 (99.54%), Query Frame = 0
BLAST of Cucsat.G4962.T5 vs. ExPASy TrEMBL
Match: A0A6J1HEP4 (putative ER lumen protein-retaining receptor C28H8.4 OS=Cucurbita moschata OX=3662 GN=LOC111462365 PE=3 SV=1) HSP 1 Score: 395 bits (1016), Expect = 1.24e-137 Identity = 203/217 (93.55%), Postives = 210/217 (96.77%), Query Frame = 0
BLAST of Cucsat.G4962.T5 vs. ExPASy TrEMBL
Match: A0A6J1KCJ9 (putative ER lumen protein-retaining receptor C28H8.4 OS=Cucurbita maxima OX=3661 GN=LOC111492053 PE=3 SV=1) HSP 1 Score: 392 bits (1006), Expect = 4.12e-136 Identity = 202/217 (93.09%), Postives = 209/217 (96.31%), Query Frame = 0
BLAST of Cucsat.G4962.T5 vs. TAIR 10
Match: AT1G75760.1 (ER lumen protein retaining receptor family protein ) HSP 1 Score: 333.6 bits (854), Expect = 1.2e-91 Identity = 164/217 (75.58%), Postives = 192/217 (88.48%), Query Frame = 0
BLAST of Cucsat.G4962.T5 vs. TAIR 10
Match: AT1G19970.1 (ER lumen protein retaining receptor family protein ) HSP 1 Score: 319.3 bits (817), Expect = 2.4e-87 Identity = 155/217 (71.43%), Postives = 188/217 (86.64%), Query Frame = 0
BLAST of Cucsat.G4962.T5 vs. TAIR 10
Match: AT2G21190.1 (ER lumen protein retaining receptor family protein ) HSP 1 Score: 317.4 bits (812), Expect = 9.1e-87 Identity = 154/213 (72.30%), Postives = 185/213 (86.85%), Query Frame = 0
BLAST of Cucsat.G4962.T5 vs. TAIR 10
Match: AT4G38790.1 (ER lumen protein retaining receptor family protein ) HSP 1 Score: 315.8 bits (808), Expect = 2.6e-86 Identity = 155/213 (72.77%), Postives = 182/213 (85.45%), Query Frame = 0
BLAST of Cucsat.G4962.T5 vs. TAIR 10
Match: AT3G25160.1 (ER lumen protein retaining receptor family protein ) HSP 1 Score: 247.3 bits (630), Expect = 1.2e-65 Identity = 122/210 (58.10%), Postives = 162/210 (77.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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