Cucsat.G4962.T2 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATCGCCGTTGTTCTTCCCGGTTCCTTATTCAGCACTTGGAGGAGTGTGAAGCTTTTCTCGCTTGTCTCACACGTCTAATGATCAATGCATTAATAAATTGGAGTTGGCTACCAGCCAACCCTAATTTTCCATAGTGCGACTTCGTCGTGTCAATACGCTACACCCATTCGTCATCACAACTCTTTTGAGGATTGGATTAACAATTCCACCACGGTTGTGATTCTGTCGCAACGTGATCATTATGAATAATTTAATACTCAGTGGGATCAGTTCTTTAACAATGGAGTTCGCTAATGCTCTCATTAATGGCGAAACTAATTACCCTTTTCATTATTGTACTGACATCTCATACCCGTTGCCCGCCACACTTCAATTGGGACTCAATTTAAAGGAGGGACCAAACAGGGATTCAAATTGGTTACCTAATTTGTTCACCAACTCTCTGAGCTTACGATTTCTTAGAGGGTATCGGGTTTTAGTGAAATTTTAGGGTTAGAAGAGAGGATTGAGGAGAAATGAAGGTACCCAGGAGGCCGATTCATGCAATTACGTCATGGGTTCGGAGGCAACCCCCGAAGATGAAAGCGTTTTTAGGAGTAGCGTCTGCGATTATTTCTCTTGTTCTTCTCTATGTGATGGTTCATGATCACAACAAGCTCTTTGTGGCCGCTGAGGCTGTTCATGCCATTGGAATTGCGGTTCTTATTTATAAGCTCATGAAGGAGAGGAGTTGTGCAGGTGTAATCTTGATGTCTTTTAGTTTGAATTTCTCTTTATTTTCTTGGTTTTGAGCTCTTAGTCCGTTTCTTTCTGGTTCTGATTAATCACTGTTACTTGCTTGAGTTTCTTTCGAGCTTGATATTAACTATCTAAAGTTGGAATTGAATTGGTTCTTTCGGATTTTGATGTTTAGTTGGATCAGCTTCTTAGTTTTGTTTAGCTTCTGGTTGTTATTTCCGATTTTGATGTTTGAGTTTGGCCATTGATCTGGATTGAGCTTTACTTCAACAATTTAGAGTAAGCTTAAGTTCTATATCCTTTTATTTTATTTTTCTTCAGGTCTTTCGCTCAAGTCGCAGGAATTAACGGCTTATTTTCTAGCTGCAAGACTCTATTGCAGCTTTGTGATCGAATATGATGTGCACACATTTCTTGATTTGGCTACTTTAGTAGCAACTCTTTGGGTCATTTACATGATTCGTTATAAGCTCAAAGCCAGCTACATGGGAGACAAAGATAACTTCAAAGTTCTATACTTGGTGAGTCTACTTCTTTTACTTGGGTTCTTCATCAAGTTCATCAGGATTGTGTTGTATTTATGCACTGAATTTAACTAATTCCAAAAATGGATTGATTTTCTTTCTTTGCCGAATTTTGGGTTACGTTTTGAAGCAAATCTACAAATCTGATTTCTTTGGGATGAGTGCCTATATGTTTCACAATTCATGTCAGTGTTCATCTTTGAGATCTCTGTTTATTGAAAATCAGTGGGATAATGCTGAATGAAGGCTTCCTTTTTGACAGTTTCTATAAATGTTTCAATATGCCTTTTAGGCTTAAGTCTTGAAGCCCAAATTTATAGCCTCCAAGCTCGAACTTTGAGAATGCATTCCAACATTTTCTGAGAAGAATTGAAACACACACACACACAGGGGCCTACAAAATGGCTTGAGACATATTTCATAAAAGAAAAGGAAAACCAAACTTTCATCAAGAATGCATTGAGACATTTCATCAACAAAGAAAAAAATTCTGCTACTGATGGTTAATTGCAAACGATTCTGAATTGGCTTGGAGAAACTTGAGTGCTTAAAAAATATGTTCAATTCTCGATGATGTTTAACCTATACCTGTTTCATAACTGTATTCATTGTATTATTATTCTTGGATACAGGTGGTACCATGTATTTTACTATCCATTTTGATTCACCCGACACCTCCAAGAGTTTCTTTGTTACAAAGAATTTTCTGGGCTTTTTGTGTTTACCTTGAAGCTGTTTCGGTTCTACCTCAGTTGCGAGTCATGCAGAACATAAAGGTTCCTCTTCCCTTTATTTCTTTTCTACTTCTGTTTATGTTCCCGTTCTTTCAGTTTTTCTCATTGGAAGGTTTGTTTATCATTAAAAAAAAAAAAGTGACAATTGATTTTATTCTTCCGTATGTTCCTTATTAGAAAATTGTCCAACTAATCAACAAATTGTATGAAATTCAAATTAAAAAACACGTTAAATCATGGGATAACAACCACCACCATAAATGGGACTGGGTTCTAATAAGAGCTCACGTAAATAGAAAAAGGATTAGGATGAGTTTGAGTTATGGATTTGATATCGTAATACTTTCTTTGGTGATCAAATGTAGTAGGATCAACTCGTTGTCTAGTTAAAAATAGTCAAAGTGGTGCAAGCTAATTCAAATACTCACATATGTGAAGTCAAGAGAACATCTAAACCATATTATGAAAAGTTTCTAAATTTTGCTAAACTACATAACCAAATTGGTAAAAGAATACGTAAACTCAAGGGAGGAAAACCACCAATGCTCACGTAGTACTCGATATCAGCCATTTAGGGCTAAGTTTGATAAAGTTGAAAGTAAAAGGTTACAATTGTATTATCTCATTAAGTCTAAGGTAAAAAGATGAATTCCTCAAAAAAGAATTCTGCTTGGGGTGGCCGAGTAGAAAGTTCAGAATTATTTATATTTAACTTTTGTTTTTCTTTTTATACTCTCTTAAATTTTGTATTCCTTTCGTTTATTGTCCAGATCGTTGAGCCATTCACTGCACACTATGTATTTGCCTTGGGGGTTGCCAGATTCCTGAGCTGTGCGCATTGGATTCTTCAGGTTTTTCCTTGAATTTCAAACTTCATATGTTGCATTTGTACCTGTAGATTTTAAAAATTGTTCAATTGTTTTGGTAGTGAGCTTTTATTCATTTCTTTCAAAAATCTGATTTTGATCCCAAAAATTTTATGTGCTTTATCTTATCCTAAGTTTTGTTTTTCAAAACATGAGCTAATGTTACACGTTATCCGTAATTTATGTGTTCATAATTATTCTTGTGGGAGGGACTAAATTTGTACTTCGATTCTATATTTCATCAACTTTAGTCTATATATAATTTGAATATATATACGTAGACTTCAGCTATATTTAACGTTTTTTCTCCCTTTATTTTTTGGAATAATAATACACAGATGGTAGCAACTCGTGGGGGGCTGCTGGTAGCGTTGGGAACTGGATTCTGGCCACCAATGGTTCTCCTTGCAGAAATTGTCCAAACTTTTGTTCTTGCAGATTTTTGTTATTACTACGTCAAAAGGTTGGTGCTCTATGGTCCTTTTCAATTTTCATGATAGGGTGAGCAGAGTCGGTTTTTTTACCAAACTGTCAATGGACCAACTATGGTCAATTTGGTCAACGTTCAAATCAACATCGACCATCAAAGACTAAAAGTTGGTCGGTTGGCTTTGTTTTTTTTTTTTTTTTCCTTTGTAAATTTGTTGATTTGGAACCAACACCAACCGACTCCTCTCCTTCTCATAAATAAATTTGAGATTTGAGTTTTATTGATGTAGAACATCCTCTTTGACTTCGTTTTTCTTGCTATCTATAAATTTTTTAGCTCATTCAATACTGTTGTTGTTGCAGTGTTCTTGGCGGTCAGCTTGTCGTACGCCTTCCTGCCGGAGTAGTCTAAGATAGAGATAGCCGACTGGCTGCTTGTTTCCGCAGAGTGAATGCCCGTTATCTGTACATATTTCTTTTTTCTTTTGTAGCGAACGCTGTGACCGAACTGGAAAAAGAAATGCTTCCTAAACTGGTGTATATGCATCCTACATTATAATCACAAAAATAATAAAGGATGCTATTGACATTTCACTTCCTTGAGTCAGGATCATTCATTGAAATTCATCCTAGTTTTGCTTTAATACTTTTGGATGAATG ATGATTCGTTATAAGCTCAAAGCCAGCTACATGGGAGACAAAGATAACTTCAAAGTTCTATACTTGGTGGTACCATGTATTTTACTATCCATTTTGATTCACCCGACACCTCCAAGAGTTTCTTTGTTACAAAGAATTTTCTGGGCTTTTTGTGTTTACCTTGAAGCTGTTTCGGTTCTACCTCAGTTGCGAGTCATGCAGAACATAAAGATCGTTGAGCCATTCACTGCACACTATGTATTTGCCTTGGGGGTTGCCAGATTCCTGAGCTGTGCGCATTGGATTCTTCAGATGGTAGCAACTCGTGGGGGGCTGCTGGTAGCGTTGGGAACTGGATTCTGGCCACCAATGGTTCTCCTTGCAGAAATTGTCCAAACTTTTGTTCTTGCAGATTTTTGTTATTACTACGTCAAAAGTGTTCTTGGCGGTCAGCTTGTCGTACGCCTTCCTGCCGGAGTAGTCTAA MIRYKLKASYMGDKDNFKVLYLVVPCILLSILIHPTPPRVSLLQRIFWAFCVYLEAVSVLPQLRVMQNIKIVEPFTAHYVFALGVARFLSCAHWILQMVATRGGLLVALGTGFWPPMVLLAEIVQTFVLADFCYYYVKSVLGGQLVVRLPAGVV Homology
BLAST of Cucsat.G4962.T2 vs. ExPASy Swiss-Prot
Match: Q6PAB8 (ER lumen protein-retaining receptor 1-A OS=Xenopus laevis OX=8355 GN=kdelr1-a PE=2 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 1.0e-17 Identity = 58/152 (38.16%), Postives = 85/152 (55.92%), Query Frame = 0
BLAST of Cucsat.G4962.T2 vs. ExPASy Swiss-Prot
Match: Q09473 (ER lumen protein-retaining receptor erd-2.2 OS=Caenorhabditis elegans OX=6239 GN=erd-2.2 PE=3 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 1.4e-17 Identity = 55/147 (37.41%), Postives = 84/147 (57.14%), Query Frame = 0
BLAST of Cucsat.G4962.T2 vs. ExPASy Swiss-Prot
Match: Q611C8 (ER lumen protein-retaining receptor OS=Caenorhabditis briggsae OX=6238 GN=erd-2 PE=3 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 3.0e-17 Identity = 48/137 (35.04%), Postives = 78/137 (56.93%), Query Frame = 0
BLAST of Cucsat.G4962.T2 vs. ExPASy Swiss-Prot
Match: P48583 (ER lumen protein-retaining receptor erd-2.1 OS=Caenorhabditis elegans OX=6239 GN=erd-2.1 PE=3 SV=2) HSP 1 Score: 89.4 bits (220), Expect = 4.0e-17 Identity = 48/137 (35.04%), Postives = 79/137 (57.66%), Query Frame = 0
BLAST of Cucsat.G4962.T2 vs. ExPASy Swiss-Prot
Match: Q99JH8 (ER lumen protein-retaining receptor 1 OS=Mus musculus OX=10090 GN=Kdelr1 PE=1 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 5.2e-17 Identity = 58/152 (38.16%), Postives = 84/152 (55.26%), Query Frame = 0
BLAST of Cucsat.G4962.T2 vs. NCBI nr
Match: KAA0065166.1 (putative ER lumen protein-retaining receptor C28H8.4 [Cucumis melo var. makuwa]) HSP 1 Score: 306 bits (784), Expect = 3.81e-103 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of Cucsat.G4962.T2 vs. NCBI nr
Match: XP_004152650.1 (ER lumen protein-retaining receptor erd-2.2 [Cucumis sativus] >KGN62676.1 hypothetical protein Csa_022026 [Cucumis sativus]) HSP 1 Score: 306 bits (784), Expect = 3.81e-103 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of Cucsat.G4962.T2 vs. NCBI nr
Match: XP_008444804.1 (PREDICTED: putative ER lumen protein-retaining receptor C28H8.4 [Cucumis melo]) HSP 1 Score: 303 bits (776), Expect = 6.28e-102 Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 0
BLAST of Cucsat.G4962.T2 vs. NCBI nr
Match: XP_038886586.1 (ER lumen protein-retaining receptor erd-2.2-like [Benincasa hispida]) HSP 1 Score: 296 bits (757), Expect = 4.88e-99 Identity = 147/154 (95.45%), Postives = 151/154 (98.05%), Query Frame = 0
BLAST of Cucsat.G4962.T2 vs. NCBI nr
Match: XP_022961664.1 (putative ER lumen protein-retaining receptor C28H8.4 [Cucurbita moschata] >XP_023547199.1 putative ER lumen protein-retaining receptor C28H8.4 [Cucurbita pepo subsp. pepo] >KAG6598499.1 ER lumen protein-retaining receptor, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029435.1 ER lumen protein-retaining receptor [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 292 bits (747), Expect = 1.62e-97 Identity = 145/154 (94.16%), Postives = 151/154 (98.05%), Query Frame = 0
BLAST of Cucsat.G4962.T2 vs. ExPASy TrEMBL
Match: A0A5A7VFR1 (Putative ER lumen protein-retaining receptor C28H8.4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005020 PE=3 SV=1) HSP 1 Score: 306 bits (784), Expect = 1.84e-103 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of Cucsat.G4962.T2 vs. ExPASy TrEMBL
Match: A0A0A0LRN5 (ER lumen protein retaining receptor family protein OS=Cucumis sativus OX=3659 GN=Csa_2G368280 PE=3 SV=1) HSP 1 Score: 306 bits (784), Expect = 1.84e-103 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of Cucsat.G4962.T2 vs. ExPASy TrEMBL
Match: A0A1S3BAQ8 (putative ER lumen protein-retaining receptor C28H8.4 OS=Cucumis melo OX=3656 GN=LOC103488042 PE=3 SV=1) HSP 1 Score: 303 bits (776), Expect = 3.04e-102 Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 0
BLAST of Cucsat.G4962.T2 vs. ExPASy TrEMBL
Match: A0A6J1KCJ9 (putative ER lumen protein-retaining receptor C28H8.4 OS=Cucurbita maxima OX=3661 GN=LOC111492053 PE=3 SV=1) HSP 1 Score: 292 bits (747), Expect = 7.84e-98 Identity = 145/154 (94.16%), Postives = 151/154 (98.05%), Query Frame = 0
BLAST of Cucsat.G4962.T2 vs. ExPASy TrEMBL
Match: A0A6J1HEP4 (putative ER lumen protein-retaining receptor C28H8.4 OS=Cucurbita moschata OX=3662 GN=LOC111462365 PE=3 SV=1) HSP 1 Score: 292 bits (747), Expect = 7.84e-98 Identity = 145/154 (94.16%), Postives = 151/154 (98.05%), Query Frame = 0
BLAST of Cucsat.G4962.T2 vs. TAIR 10
Match: AT1G75760.1 (ER lumen protein retaining receptor family protein ) HSP 1 Score: 245.0 bits (624), Expect = 4.0e-65 Identity = 117/154 (75.97%), Postives = 138/154 (89.61%), Query Frame = 0
BLAST of Cucsat.G4962.T2 vs. TAIR 10
Match: AT4G38790.1 (ER lumen protein retaining receptor family protein ) HSP 1 Score: 238.0 bits (606), Expect = 4.9e-63 Identity = 115/154 (74.68%), Postives = 134/154 (87.01%), Query Frame = 0
BLAST of Cucsat.G4962.T2 vs. TAIR 10
Match: AT1G19970.1 (ER lumen protein retaining receptor family protein ) HSP 1 Score: 234.2 bits (596), Expect = 7.1e-62 Identity = 112/154 (72.73%), Postives = 135/154 (87.66%), Query Frame = 0
BLAST of Cucsat.G4962.T2 vs. TAIR 10
Match: AT2G21190.1 (ER lumen protein retaining receptor family protein ) HSP 1 Score: 229.2 bits (583), Expect = 2.3e-60 Identity = 109/154 (70.78%), Postives = 130/154 (84.42%), Query Frame = 0
BLAST of Cucsat.G4962.T2 vs. TAIR 10
Match: AT3G25160.1 (ER lumen protein retaining receptor family protein ) HSP 1 Score: 195.7 bits (496), Expect = 2.8e-50 Identity = 98/151 (64.90%), Postives = 121/151 (80.13%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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