Cucsat.G4745.T20 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATAAACAAAACAAAACAACCCCCAAATATATATTAAAAACACACACTCCATTATTCCAACATCTTAGATAAGACCCATCTTTTCCAAACGCCCTCTCCTTCCCCCTTCCTCTCTTCTTCTTCTATATACTTTTATTTCTGTTTATAAAACACTTTCTCCACCCTAAAACCTCCATTAAAACCTCATCTTCTTCACTTTCTTCTTCTTTTTCTTCTTCTTCTTTCTCGAAGTTCATTCCTCTTTCACAGCCCCACAGAAATGTTTGCTGCAGAAAATGGTCTTAAGGGAGACCCCAGGCTTCAAGGCATCTCTCAAGCCATTAGAGTTGTTCCTCACTTCCCTAAGCCCGGTTTGTTTTTAACTAAATCATGATTCTGTTTCTGTACACATTTTGAATTGAATTTCAAGTTTATCTTCTTTTCGTTTTTTGTTGACAGGGATAATGTTTCAAGATATTACTACGTTGTTGCTTGATCACAAGGCGTTTAAGGATACTGTCGACATTTTTGTAGATCGTTACAGGGGAATGAACATCTCTGTTGTTGCTGGTTTTCTTCTCCTCTTCTCTCTCTTTTCTTTCTCTTTAACACGATGGAATCAAACTGAAAAGTTTTGTTCCTCTTTACCGGCATTGCCTGATGATTTTTTCTTATTTCTTCAGTGATCAAAAGTTGTACTGATTTTTTCTTTTCCTCTTGCAACTTTCTTGGGGTTTCTCAACTCCTCTGTTTTTTTTTTTTTTTTTTTGTCAGCTTAAATGGAAGGAAAGAACTATAGGGGTTTGTCGAGGACTGATTTCTTCTTCTTTTTTTCTTTTACTGATTTAGTGTTTCTCTCTCTTCTTTCACACGGTTCATTGAAGGAAAGTAAAACTTTCTTCTTGTACTTTGCTGTCCACATCTCTTACCCTTTTAAAAAAACACAAATGCTTTACCTAAGAAATTATGATTATCTTTTAAACTTTTTTATTTTGGCCCTCTCCATTACCATTTCTATCAAACACGTTTTTGATATTTTCCCCATTAAGCAAGTCTGTGATCTGATTTTGCTAACGCTTTGACATGCAGGTGTAGAAGCCAGAGGATTCATGTTTGGTCCTTCAATTGCTTTATCCATTGGAGCAAAGTTCGTTCCTTTACGAAAACCCAGAAAGCTTCCTGGTAATAGTTTTTATTTTTCAAGCATTTGGGATGTGGGGATGGTTAATTGATTCAATTTTTTTCTTTTGACTGTTTACAGGTGAAGTAATTTCAGAAGCTTATGATTTGGAGTATGGAACTGATTGCTTAGAAATGCAAATAGATGCTGTGAAAACTGGTGAACGTGCATTGGTTATTGATGATTTGGTGGCCACTGGTGGAACCTTATCGGCAGCAATCAGGCTTCTGGGTATGTTCAGGTTCTTCGGTACTCTGTTTTTTTAGTTTTGAAATTGTTTCACAAGAACATTACCTTATAAAAATTGAGGTTCGATGAATTAATTTTGGGACATTTCTTATCACTAAACCTTAAAAGAGAAAATCCGTGGGAAAATTTTGCTTGTTTTATGTCCATGGTCTTTTCTGGACTACAAAACAAAAGTATGGGATTCATCATTGTTTTTTAGATTTCTTGATTAAAATCAATTATTATGCATAATTATGTTTCCCTCGTTATCTTGAAAATAAAGAATTAAAATCAAATGGGACCATCATATCTTAATAAATTAGTTTAGTTTCAAATTAATTTGGTTTTGTTTTTAATTATCCTTTTCTGTTGTTAGAACGGATGGGTGCTGAAGTGGTTGAATGTGCTTGTGTTGTCGGATTGCGCGAAGTTAAGGTAGTAATCGTCAGAGAATATTTCGTCTCTTTTAGTTTAATTCTATCCTTTATTAATTATGTAATTAAATTAACTAAACTTTGCTTTGTTTGAAATTCCCTGTAATTAAGGGACAGCGTAGGCTGGATGGAAAGCCACTTTATATCCTTGTTGAGCCACGTCAATTGGATGATTGTTTCTAAGGTACATTTTCGAAGCTTTATTTTTCTATAATTTGATGGTAAACTCGTTGAGGTCTAATATCAATTTAATCAAACAAGACATCAATGATTCAATTGTGGATGCAACATATGGTTGCTTAACTCTCATTGCTCTAGATTATTATAACCACATTTTTACAGCAGTAGCAGACTTTGATGTAAAGTAAACCCATTTTTGCCATTATGGATGTAGGTGGGTGATATCTCTTAGGTTGTGCTTAGGCTGATAGTGAGAAGATGATGCTTGAGCAAACAGGTTGAGACTGAGACAGAGAGAGAGAGAGAGATTTGATTACTGCATCCAAAGTTTGAGCAGCGATGAATGAAAATGTTGGGTCCATTGTACTATTTTTTAATGGTAAATTATCTGTCCTTTCCCCAGGCTGTTATTTTAACAAAATCTTGAATGAACAAACTATTCTCAGATTCTGATATTCATAAAAGAAAAAAAAATCCATGATGTCTCATTTGTTGTACATGAATAGGATCCAATTTGTGTCTTCTTTCTTTTCCAGTGTTTTCTCTTAGTTTTTCGTTCTGTTCCGGCTTTGTACCTTTTACCACTACTGCTCCTCTTTCCTTATCAGTCTTACTTTGCTAAAAGAATTTCTTAGAATGTAACCAGTTTGAAAATAGTAGGAAACAGGGTTTGGTTGATTAAAGTGGAAGGAGAAGGTAATAAAAATTACAAACCGTGGGTTTGAGATTACGATCCTGAACAAACTCATGGTTTAAGAACTTAACATGGCATTCAAGATAAACCACTAATGTGCAGGGTTTCGTTGTAAAGACAAATTTATCATTATTGTTTAACTTTAATCGCATATAACAGTAACAATCATAGTGGGGGAACAAGCCTAAGATAATGAACCAATAATTTTGTTTGAAAATGGCTCTGCCAACATGAAGCTTTATGCATGATGATTTTTTTTTTCCACTGTACAGCTTCTTTTGGCTGTGGAATTGTCATCATTTACCTATGAGAGATGGTAAAGAGTGGGGTTGTTTGTGTGT ATGTTTGCTGCAGAAAATGGTCTTAAGGGAGACCCCAGGCTTCAAGGCATCTCTCAAGCCATTAGAGTTGTTCCTCACTTCCCTAAGCCCGGGATAATGTTTCAAGATATTACTACGTTGTTGCTTGATCACAAGGCGTTTAAGGATACTGTCGACATTTTTGTAGATCGTTACAGGGGAATGAACATCTCTGTTGTTGCTGGTGTAGAAGCCAGAGGATTCATGTTTGGTCCTTCAATTGCTTTATCCATTGGAGCAAAGTTCGTTCCTTTACGAAAACCCAGAAAGCTTCCTGGTGAAGTAATTTCAGAAGCTTATGATTTGGAGTATGGAACTGATTGCTTAGAAATGCAAATAGATGCTGTGAAAACTGGTGAACGTGCATTGGTTATTGATGATTTGGTGGCCACTGGTGGAACCTTATCGGCAGCAATCAGGCTTCTGGGTATGTTCAGGTTCTTCGGTACTCTGTTTTTTTAG MFAAENGLKGDPRLQGISQAIRVVPHFPKPGIMFQDITTLLLDHKAFKDTVDIFVDRYRGMNISVVAGVEARGFMFGPSIALSIGAKFVPLRKPRKLPGEVISEAYDLEYGTDCLEMQIDAVKTGERALVIDDLVATGGTLSAAIRLLGMFRFFGTLFF Homology
BLAST of Cucsat.G4745.T20 vs. ExPASy Swiss-Prot
Match: Q42563 (Adenine phosphoribosyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=APT2 PE=1 SV=1) HSP 1 Score: 239.2 bits (609), Expect = 3.2e-62 Identity = 118/148 (79.73%), Postives = 131/148 (88.51%), Query Frame = 0
BLAST of Cucsat.G4745.T20 vs. ExPASy Swiss-Prot
Match: Q9LFP0 (Adenine phosphoribosyltransferase 5 OS=Arabidopsis thaliana OX=3702 GN=APT5 PE=1 SV=1) HSP 1 Score: 239.2 bits (609), Expect = 3.2e-62 Identity = 118/148 (79.73%), Postives = 133/148 (89.86%), Query Frame = 0
BLAST of Cucsat.G4745.T20 vs. ExPASy Swiss-Prot
Match: Q9SU38 (Adenine phosphoribosyltransferase 4 OS=Arabidopsis thaliana OX=3702 GN=APT4 PE=1 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 6.5e-55 Identity = 105/145 (72.41%), Postives = 126/145 (86.90%), Query Frame = 0
BLAST of Cucsat.G4745.T20 vs. ExPASy Swiss-Prot
Match: P31166 (Adenine phosphoribosyltransferase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APT1 PE=1 SV=2) HSP 1 Score: 213.8 bits (543), Expect = 1.4e-54 Identity = 102/138 (73.91%), Postives = 122/138 (88.41%), Query Frame = 0
BLAST of Cucsat.G4745.T20 vs. ExPASy Swiss-Prot
Match: Q9SUW2 (Adenine phosphoribosyltransferase 3 OS=Arabidopsis thaliana OX=3702 GN=APT3 PE=1 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 1.9e-54 Identity = 104/138 (75.36%), Postives = 118/138 (85.51%), Query Frame = 0
BLAST of Cucsat.G4745.T20 vs. NCBI nr
Match: KAA0064915.1 (adenine phosphoribosyltransferase 5-like [Cucumis melo var. makuwa]) HSP 1 Score: 293 bits (749), Expect = 4.59e-99 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of Cucsat.G4745.T20 vs. NCBI nr
Match: XP_008445234.1 (PREDICTED: adenine phosphoribosyltransferase 5-like [Cucumis melo]) HSP 1 Score: 293 bits (749), Expect = 6.05e-99 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of Cucsat.G4745.T20 vs. NCBI nr
Match: XP_004138720.1 (adenine phosphoribosyltransferase 5 [Cucumis sativus] >KGN62962.1 hypothetical protein Csa_022002 [Cucumis sativus]) HSP 1 Score: 293 bits (749), Expect = 6.05e-99 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of Cucsat.G4745.T20 vs. NCBI nr
Match: XP_038886535.1 (adenine phosphoribosyltransferase 5-like [Benincasa hispida]) HSP 1 Score: 291 bits (746), Expect = 1.73e-98 Identity = 147/148 (99.32%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of Cucsat.G4745.T20 vs. NCBI nr
Match: XP_022131747.1 (adenine phosphoribosyltransferase 5-like isoform X1 [Momordica charantia] >XP_022131748.1 adenine phosphoribosyltransferase 5-like isoform X1 [Momordica charantia]) HSP 1 Score: 287 bits (735), Expect = 8.51e-97 Identity = 145/148 (97.97%), Postives = 146/148 (98.65%), Query Frame = 0
BLAST of Cucsat.G4745.T20 vs. ExPASy TrEMBL
Match: A0A5A7VG99 (Adenine phosphoribosyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002330 PE=3 SV=1) HSP 1 Score: 293 bits (749), Expect = 2.22e-99 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of Cucsat.G4745.T20 vs. ExPASy TrEMBL
Match: A0A0A0LQA3 (Adenine phosphoribosyltransferase OS=Cucumis sativus OX=3659 GN=Csa_2G381870 PE=3 SV=1) HSP 1 Score: 293 bits (749), Expect = 2.93e-99 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of Cucsat.G4745.T20 vs. ExPASy TrEMBL
Match: A0A1S3BBQ4 (Adenine phosphoribosyltransferase OS=Cucumis melo OX=3656 GN=LOC103488321 PE=3 SV=1) HSP 1 Score: 293 bits (749), Expect = 2.93e-99 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of Cucsat.G4745.T20 vs. ExPASy TrEMBL
Match: A0A6J1BRW4 (Adenine phosphoribosyltransferase OS=Momordica charantia OX=3673 GN=LOC111004836 PE=3 SV=1) HSP 1 Score: 287 bits (735), Expect = 4.12e-97 Identity = 145/148 (97.97%), Postives = 146/148 (98.65%), Query Frame = 0
BLAST of Cucsat.G4745.T20 vs. ExPASy TrEMBL
Match: A0A6J1GIU4 (Adenine phosphoribosyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111454266 PE=3 SV=1) HSP 1 Score: 287 bits (734), Expect = 5.66e-97 Identity = 144/148 (97.30%), Postives = 146/148 (98.65%), Query Frame = 0
BLAST of Cucsat.G4745.T20 vs. TAIR 10
Match: AT1G80050.1 (adenine phosphoribosyl transferase 2 ) HSP 1 Score: 239.2 bits (609), Expect = 2.3e-63 Identity = 118/148 (79.73%), Postives = 131/148 (88.51%), Query Frame = 0
BLAST of Cucsat.G4745.T20 vs. TAIR 10
Match: AT5G11160.1 (adenine phosphoribosyltransferase 5 ) HSP 1 Score: 239.2 bits (609), Expect = 2.3e-63 Identity = 118/148 (79.73%), Postives = 133/148 (89.86%), Query Frame = 0
BLAST of Cucsat.G4745.T20 vs. TAIR 10
Match: AT4G12440.1 (adenine phosphoribosyl transferase 4 ) HSP 1 Score: 216.5 bits (550), Expect = 1.6e-56 Identity = 108/155 (69.68%), Postives = 130/155 (83.87%), Query Frame = 0
BLAST of Cucsat.G4745.T20 vs. TAIR 10
Match: AT4G12440.2 (adenine phosphoribosyl transferase 4 ) HSP 1 Score: 214.9 bits (546), Expect = 4.6e-56 Identity = 105/145 (72.41%), Postives = 126/145 (86.90%), Query Frame = 0
BLAST of Cucsat.G4745.T20 vs. TAIR 10
Match: AT1G27450.1 (adenine phosphoribosyl transferase 1 ) HSP 1 Score: 213.8 bits (543), Expect = 1.0e-55 Identity = 102/138 (73.91%), Postives = 122/138 (88.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
|