Cucsat.G4275.T2 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G4275.T2
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	COBW domain-containing protein 1
Location	ctg1170: 663464 .. 667994 (-)
RNA-Seq Expression	Cucsat.G4275.T2
Synteny	Cucsat.G4275.T2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAACTAAATGGCTCATTTTCGTAGCTTTCAAGTCTCACGTGCTCCACCCTCTCCTATTTCTTTCCGTTTAGCATCTCAGTTCCGCCGCTGCCGTTCTTCGGTTCGTGCTCGTACAGCATCCTATCTAACGGCTCTGCACTGATTGGTATTCTCCCAATCTCCATCTATCTCTGTCTCCTCACTCGAATAACGAAAGAATGGAAGATTTGTATGTATTATCATGAATTTTCCAGCATCTCCCTTCTCAGTCGAAGTAATTCAATTATCTTTTAATCACAAGCACGTCCGGCGGCTATCTTTTAATTGACCGAACAACCTCAACAATATTTCTATTTTGTATATTTGTTTAACCAATGATGGTCTGAATTTACTGAATATAAAAGCCTTCCTAGTTCCTTATGCTTCATACTTGATACTCCACCCTCCATTTATTCTTCTTCTATTGCTATTATTATATTTCTATAGTTGATTGTGTCAAATTAGAGTCTGTGACTGTTTTGAATGATAGCTGGACGTGTTTCGATTGATTTTTTGTATTGAAAATGTTTATGTTTTGGTTTTGTTACTTCTGACTAATTGGAGAAGTTTTATAGCTCCATTGGTTTGGGCATGCTGTCTTTTTTCGTGTGTGTGTGTGTAAATTTCATACATCAATGAAATTTGTTTCTTATAAAAAAGATGAAAGGTTTGGATGATTTGATTTGATGATTTCTTCTGCTGAGATTGCAATTTGAAACTGTGTGTTTTGTTTGAAATGTTTATGAATGATTCGGATGCCAAATCGATGGTGTAGTTGTCTTTCCGCTTGCTAATTAAAACAAAGTAATAAAGTGTAAGTGAACTTTCTTTTGGGCCTGAATATCGAACTCGATTGGGAAAACACCAGGACGGGCCAAAGAAACAGTTGGTTGGGATGAAATGTTAATTACTAATTCTGAGGAAGTTAATGAGGTTGGACCTTAATTATTGAAAGCCAAGGATTTTTTTTATTAAATACAACTTGCTTTTCATTTTATGGATGGAGTTCAACTCTTTGTTTTTGGTGCTGTTTTTAGGTCAGTTTTTGTTTAATCTCCCAGAAATTTTTTATGAGTGAGTGTCTAGATAGCTTATGCCTACCTTGATTAATTTCAGTCAGAAAGCAGATGTATTGAAGGTCAATTATCAAATTGAAACTACCAAACCCAAATCCACGGCTACGATTTGAAAAATGGAAGATGAAGATCCACCACTCGCTGTTGAGATTGGCGAAACAATTACAGCTGTCCAACAACATGAAGATGATGGTGTTTCTGTTGGCGTTACAGTTATCACTGGATATCTTGGAGCTGGAAAATCCACCGTAACTTACACTCTGAAACTTTTCTCCTTACCCCCTCACTCGATTTCTTTTTGCAACCATCAAATTTGAGCTATAGAATGATATTTCTTGTTTGGTGGAATTCAGTTGGTTAATTACGTATTGAACTCGCAACATGGCAAGAGAATTGCTGTTATACTGAACGAATTTGGGGAGGAAATTGGAATTGAGAGGGCAATGATAAATGAAGGTGACGGTGGGGCGTTGGTTGAGGAATGGGTCGAATTAGCAAATGGATGTATTTGTTGCACTGTTAAGCATAGCCTGGTTCAAGCCTTGGAGCAACTTGTGCAGAGAAAAGAAAGGTATTCTCTTGCTGTTATATTAGATTTCAATGGAGCTTCTGGAAAAATACGTTGATGATTTAGTCCATCTTACATGTCTCTAGGCTCGATCATATTTTGTTGGAAACTACGGGATTAGCCAATCCTGCTCCACTTGCTTCTGTACTTTGGCTGGACGATCAATTGGAATCATCGATCAAGCTTGATTCAATTATTACAGTCAGTTCTTAGTTCTTGTTCCTTCACGGTTTGAGTTAGTTTCCCCAAGTTTACTTTGAAATACGTATTATAGTTTGGAAATGTTTGTGAATTACATGCTATAGTTCTTAAGTTTAAGAATGTGTCATATTTGATGTTTGATTGAAATTAAGATAGCCAATGAAGCTTAAGTTTCCCCTTGTTCTAAGGTTAAATTTATGTGTTGGCTTTCGTTTCTATGTTGTTATTTAATTCGATTTTGTCTGTCCATGTGTGAATGCATGGTGTAGTAAATACTTGAATGCTTCAAACTTTGTTTTAAATTCTTTTTCTAGTGATCTAAAGGTTTCACCCAATAATAACTCCTTATGTTCATTTGGATGAATACATGCAAGTAGGTCGTGGATGCTAAAAATCTTCATTTTCAATTGAATGAGCACCGTAGTTCATCATCCTTTCCGGAAGCATTTCATCAAATTGTGTTTGCGGTAATATTCTTATTCTTAGTTCTTTTATGGTCTCTGCAAGTTTGCAATCTACTATTAATTATGTCAAGCAACTGCTGGGATCTTCATTATTTTTCATTTTTCATTCCATTATTACTTAGTATTTTTGTTTGTTTTATTTCTGTCTCTCTTGCTATATGGTTTGTTTTATTTCTCTCTTTTGCTATATGGTTTGTTTTATTTCTCTCTTTTGCTATATGGTTTTCTCAATAATTGTCCAATGTGCACGCCTAAGAAGTTGTGAATCTGTTATCCATCATAGGATACTATTATTCTTAACAAGGTCGACCTGGTCTCTTCAGATCGTGGTGATGGTGCATTGGAGGACCTGGAGTATGAAATACGTAACATTAATTCTCTTGCCAAAATCATTCACTCTGTTCGGTGTCAAGTAGACCTGTCTCTCATACTAGACTGCAATTCCTATAATGCTGCTGTTAGTCATGAACTTAACTTTAACCCCCCAGCTCATTTTCTATTTTTGTATCTGTCCTCTTTATCTAATACTATTCAGTTTTTCCTCATTTAGAATACAGCTCATTTAGAAGCATTATTGAAAGAAAGTTGTTCTTTATCTACTCAAGATCTTCATGATACTGGTGTTCGAACCTTGTGCATTAGTGAACACGACAAAGTTGACCTTGATAAGGTAGTTTCATGTATTTCCGTTAAAGATTGTGTGGTTCCATTCAACTAGTTTCTAGTGATAGATCATCTATGCTGAATTGTTATGACATCCTGTCGTGAACCTGTAGGATAGGATCCTTCTTATTTTAAATTGCTTAGGCATTTAAGAATTTCACGACCTGGAGTGTAGCTACATCCATGCTGATTTATGTTTTAGCCAAAGATCCATTGAAGTAATAATATTCTGAACTACTAATATATCTTTCCATTGGCTTGCTGATCTATTTAACGAAGTATTTAACTTCCGAAGTGATTATATAAATCACTCATCTTCACTATGAGCATGATGATTGAAGTAGGCACAATTCGTACAAGCAATATAAGTTACTGCCTTGGAAATTCATGATATTTCTCGTTAATCTGCATTTCATATCCGATCTTCGTGATGGTGCTATTCTCATGCCTACCTTATTTTGCAATAGGTTCATTCTTGGCTTGAGGAGATACTTTGGGAGAAAAAAGGTGGCATGGATGTGTATCGTTGCAAAGGAGTTTTAAGCATAAAAAATTCTGATCAGCTACATACTTTGCAGGTAGATTATGTGCTTAATCCTATAGTTTTTGCTGTTGGAAAATCACTCCAAACAGGCTTCTTTTTTAACCATCGTCCTAATTTCCCATCCTTTGTTAATCCGATTTCCATGCATTCCTTTTGGGTTTTGAACCCAAATGAAAAGGTTGAGTTATTGCGATGATACTTCCTAACAAGAACACTCAAGAACAACACAGAAAACTCAAGAAGACTCAAATATAAAAACATATGGAAATATACTGTAATATATATTATAAGAGAAGTAGCAAGATAACCTTGCCTTCCAAGTGGGCTAGTCCAAAGGAAATCTCACAAAATTCCTCACTCTTTGCTCCTTATCTCATTCCCTTTATTTATAAGCCCTAACAATACCAACATTCTACTACTAATCCTACTATATCTCTAACTAGGGAGCTCTTTTTCATGTTAATGACTGATTTTGATTGGTGGCTGACAGGCAGTTCGGGAATTATACGAGATCGTTCCTACACGGCAATGGAACAATGGAGAAAGTCAGACGAACAAGATAGTGTTCATAGGTAAAAGACATACAAAAATATCCACGCCCATGAACTCTTACAATGTGTTTATTGTTGAAACTTACACATTGTCCATAATATGCAGGTCGTAATCTGAACGAGGATGTTCTCAGCAAAACCTTTAGAGAATGTGCTTCTATCTCCTAAATTTTGTTGCTTTACTATTTGTTCGACTACATAGGCAAACAAGGAAGAGCATATGCGTAGGTGAAATGGTTTTGTATGATTTCGAAGTCCTTTTTTTGTATGTTAACTTGGATAAGTGTTTCCTAAATTAACTGTCTTTCGGTCTTGTTAGAGGTGTTCTAGAAAGGTTTTTGATGGAAAGATTTGTGAACGAAGGTACCATTGGATGTTTATTTTTCTAAATGAAAGTTCTTTTGAAAGTTAACATTGCAATAAAAATATCAAAAATTAAATTAGT

Coding sequence (CDS)

ATGGAAGATGAAGATCCACCACTCGCTGTTGAGATTGGCGAAACAATTACAGCTGTCCAACAACATGAAGATGATGGTGTTTCTGTTGGCGTTACAGTTATCACTGGATATCTTGGAGCTGGAAAATCCACCTTGGTTAATTACGTATTGAACTCGCAACATGGCAAGAGAATTGCTGTTATACTGAACGAATTTGGGGAGGAAATTGGAATTGAGAGGGCAATGATAAATGAAGGTGACGGTGGGGCGTTGGTTGAGGAATGGGTCGAATTAGCAAATGGATGTATTTGTTGCACTGTTAAGCATAGCCTGGTTCAAGCCTTGGAGCAACTTGTGCAGAGAAAAGAAAGGCTCGATCATATTTTGTTGGAAACTACGGGATTAGCCAATCCTGCTCCACTTGCTTCTGTACTTTGGCTGGACGATCAATTGGAATCATCGATCAAGCTTGATTCAATTATTACAGTCAGTTCTTAG

Protein sequence

MEDEDPPLAVEIGETITAVQQHEDDGVSVGVTVITGYLGAGKSTLVNYVLNSQHGKRIAVILNEFGEEIGIERAMINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHILLETTGLANPAPLASVLWLDDQLESSIKLDSIITVSS

Homology

[Close]

BLAST of Cucsat.G4275.T2 vs. ExPASy Swiss-Prot
Match: Q9BRT8 (COBW domain-containing protein 1 OS=Homo sapiens OX=9606 GN=CBWD1 PE=1 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 4.9e-39
Identity = 81/154 (52.60%), Postives = 111/154 (72.08%), Query Frame = 0


Query: 3   DEDPPLAVEIGETITAVQQHEDDGVSVGVTVITGYLGAGKSTLVNYVLNSQHGKRIAVIL 62
           +ED P  V I  T +  ++    G  + VT+ITGYLGAGK+TL+NY+L  QH KR+AVIL
Sbjct: 16  EEDCPELVPIETTQSEEEEKSGLGAKIPVTIITGYLGAGKTTLLNYILTEQHSKRVAVIL 75

Query: 63  NEFGEEIGIERAMINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHIL 122
           NEFGE   +E+++     GG L EEW+EL NGC+CC+VK S ++A+E L+Q+K + D+IL
Sbjct: 76  NEFGEGSALEKSLA-VSQGGELYEEWLELRNGCLCCSVKDSGLRAIENLMQKKGKFDYIL 135

Query: 123 LETTGLANPAPLASVLWLDDQLESSIKLDSIITV 157
           LETTGLA+P  +AS+ W+D +L S I LD IIT+
Sbjct: 136 LETTGLADPGAVASMFWVDAELGSDIYLDGIITI 168

[Close]

BLAST of Cucsat.G4275.T2 vs. ExPASy Swiss-Prot
Match: Q8IUF1 (COBW domain-containing protein 2 OS=Homo sapiens OX=9606 GN=CBWD2 PE=2 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 2.5e-38
Identity = 79/154 (51.30%), Postives = 111/154 (72.08%), Query Frame = 0


Query: 3   DEDPPLAVEIGETITAVQQHEDDGVSVGVTVITGYLGAGKSTLVNYVLNSQHGKRIAVIL 62
           +ED P  V +  T +  ++    G  + VT+ITGYLGAGK+TL+NY+L  QH KR+AVIL
Sbjct: 16  EEDCPELVPMETTQSEEEEKSGLGAKIPVTIITGYLGAGKTTLLNYILTEQHSKRVAVIL 75

Query: 63  NEFGEEIGIERAMINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHIL 122
           NEFGE   +E+++     GG L EEW+EL NGC+CC+VK + ++A+E L+Q+K + D+IL
Sbjct: 76  NEFGEGSALEKSLA-VSQGGELYEEWLELRNGCLCCSVKDNGLRAIENLMQKKGKFDYIL 135

Query: 123 LETTGLANPAPLASVLWLDDQLESSIKLDSIITV 157
           LETTGLA+P  +AS+ W+D +L S I LD IIT+
Sbjct: 136 LETTGLADPGAVASMFWVDAELGSDIYLDGIITI 168

[Close]

BLAST of Cucsat.G4275.T2 vs. ExPASy Swiss-Prot
Match: Q8VEH6 (COBW domain-containing protein 1 OS=Mus musculus OX=10090 GN=Cbwd1 PE=1 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.6e-37
Identity = 81/153 (52.94%), Postives = 111/153 (72.55%), Query Frame = 0


Query: 4   EDPPLAVEIGETITAVQQHEDDGVSVGVTVITGYLGAGKSTLVNYVLNSQHGKRIAVILN 63
           ED P  V I ET    +++ D    + VT++TGYLGAGK+TL+NY+L  QH ++IAVILN
Sbjct: 16  EDCPELVPI-ETKNQEEENLDFITKIPVTIVTGYLGAGKTTLLNYILTEQHNRKIAVILN 75

Query: 64  EFGEEIGIERAMINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHILL 123
           EFGE   +E+++     GG L EEW+EL NGC+CC+VK S ++A+E L+Q+K + D+ILL
Sbjct: 76  EFGEGSAVEKSLA-VSQGGELYEEWLELRNGCLCCSVKDSGLRAIENLMQKKGKFDYILL 135

Query: 124 ETTGLANPAPLASVLWLDDQLESSIKLDSIITV 157
           ETTGLA+P  +AS+ W+D +L S I LD IITV
Sbjct: 136 ETTGLADPGAVASMFWVDAELGSDIYLDGIITV 166

[Close]

BLAST of Cucsat.G4275.T2 vs. ExPASy Swiss-Prot
Match: Q5JTY5 (COBW domain-containing protein 3 OS=Homo sapiens OX=9606 GN=CBWD3 PE=1 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.1e-37
Identity = 79/154 (51.30%), Postives = 109/154 (70.78%), Query Frame = 0


Query: 3   DEDPPLAVEIGETITAVQQHEDDGVSVGVTVITGYLGAGKSTLVNYVLNSQHGKRIAVIL 62
           +ED P  V I  T +  ++    G  + VT+ITGYLGAGK+TL+NY+L  QH KR+AVIL
Sbjct: 16  EEDCPELVPIETTQSEEEEKSGLGAKIPVTIITGYLGAGKTTLLNYILTEQHSKRVAVIL 75

Query: 63  NEFGEEIGIERAMINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHIL 122
           NE GE   +E+++     GG L EEW+EL NGC+CC+VK + ++A+E L+Q+K + D IL
Sbjct: 76  NESGEGSALEKSLA-VSQGGELYEEWLELRNGCLCCSVKDNGLRAIENLMQKKGKFDDIL 135

Query: 123 LETTGLANPAPLASVLWLDDQLESSIKLDSIITV 157
           LETTGLA+P  +AS+ W+D +L S I LD IIT+
Sbjct: 136 LETTGLADPGAVASMFWVDAELGSDIYLDGIITI 168

[Close]

BLAST of Cucsat.G4275.T2 vs. ExPASy Swiss-Prot
Match: Q4V339 (COBW domain-containing protein 6 OS=Homo sapiens OX=9606 GN=CBWD6 PE=3 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.1e-37
Identity = 79/154 (51.30%), Postives = 109/154 (70.78%), Query Frame = 0


Query: 3   DEDPPLAVEIGETITAVQQHEDDGVSVGVTVITGYLGAGKSTLVNYVLNSQHGKRIAVIL 62
           +ED P  V I  T +  ++    G  + VT+ITGYLGAGK+TL+NY+L  QH KR+AVIL
Sbjct: 16  EEDCPELVPIETTQSEEEEKSGLGAKIPVTIITGYLGAGKTTLLNYILTEQHSKRVAVIL 75

Query: 63  NEFGEEIGIERAMINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHIL 122
           NE GE   +E+++     GG L EEW+EL NGC+CC+VK + ++A+E L+Q+K + D IL
Sbjct: 76  NESGEGSALEKSLA-VSQGGELYEEWLELRNGCLCCSVKDNGLRAIENLMQKKGKFDDIL 135

Query: 123 LETTGLANPAPLASVLWLDDQLESSIKLDSIITV 157
           LETTGLA+P  +AS+ W+D +L S I LD IIT+
Sbjct: 136 LETTGLADPGAVASMFWVDAELGSDIYLDGIITI 168

[Close]

BLAST of Cucsat.G4275.T2 vs. NCBI nr
Match: XP_031742495.1 (COBW domain-containing protein 1-like [Cucumis sativus] >XP_031742496.1 COBW domain-containing protein 1-like [Cucumis sativus] >KGN47644.1 hypothetical protein Csa_018976 [Cucumis sativus])

HSP 1 Score: 303 bits (777), Expect = 1.14e-100
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MEDEDPPLAVEIGETITAVQQHEDDGVSVGVTVITGYLGAGKSTLVNYVLNSQHGKRIAV 60
           MEDEDPPLAVEIGETITAVQQHEDDGVSVGVTVITGYLGAGKSTLVNYVLNSQHGKRIAV
Sbjct: 1   MEDEDPPLAVEIGETITAVQQHEDDGVSVGVTVITGYLGAGKSTLVNYVLNSQHGKRIAV 60

Query: 61  ILNEFGEEIGIERAMINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDH 120
           ILNEFGEEIGIERAMINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDH
Sbjct: 61  ILNEFGEEIGIERAMINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDH 120

Query: 121 ILLETTGLANPAPLASVLWLDDQLESSIKLDSIITV 156
           ILLETTGLANPAPLASVLWLDDQLESSIKLDSIITV
Sbjct: 121 ILLETTGLANPAPLASVLWLDDQLESSIKLDSIITV 156

[Close]

BLAST of Cucsat.G4275.T2 vs. NCBI nr
Match: XP_031742511.1 (COBW domain-containing protein 1 [Cucumis sativus])

HSP 1 Score: 302 bits (773), Expect = 4.60e-100
Identity = 154/156 (98.72%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MEDEDPPLAVEIGETITAVQQHEDDGVSVGVTVITGYLGAGKSTLVNYVLNSQHGKRIAV 60
           MEDEDPPLAVEIGETITAVQQHEDDGVSVGVTVITGYLGAGKST++NYVLNSQHGKRIAV
Sbjct: 1   MEDEDPPLAVEIGETITAVQQHEDDGVSVGVTVITGYLGAGKSTVINYVLNSQHGKRIAV 60

Query: 61  ILNEFGEEIGIERAMINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDH 120
           ILNEFGEEIGIERAMINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDH
Sbjct: 61  ILNEFGEEIGIERAMINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDH 120

Query: 121 ILLETTGLANPAPLASVLWLDDQLESSIKLDSIITV 156
           ILLETTGLANPAPLASVLWLDDQLESSIKLDSIITV
Sbjct: 121 ILLETTGLANPAPLASVLWLDDQLESSIKLDSIITV 156

[Close]

BLAST of Cucsat.G4275.T2 vs. NCBI nr
Match: KAG7029568.1 (COBW domain-containing protein 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 293 bits (751), Expect = 7.49e-98
Identity = 150/157 (95.54%), Postives = 155/157 (98.73%), Query Frame = 0


Query: 1   MEDE-DPPLAVEIGETITAVQQHEDDGVSVGVTVITGYLGAGKSTLVNYVLNSQHGKRIA 60
           MEDE DPPLAVEIGETITA ++HEDDGVSVGVTVITGYLGAGKSTLVNY+LNSQHGKRIA
Sbjct: 1   MEDEEDPPLAVEIGETITAAERHEDDGVSVGVTVITGYLGAGKSTLVNYILNSQHGKRIA 60

Query: 61  VILNEFGEEIGIERAMINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLD 120
           VILNEFGEEIG+ERAMINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLD
Sbjct: 61  VILNEFGEEIGVERAMINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLD 120

Query: 121 HILLETTGLANPAPLASVLWLDDQLESSIKLDSIITV 156
           HILLETTGLANPAPLASVLWLDDQLESS+KLDSIITV
Sbjct: 121 HILLETTGLANPAPLASVLWLDDQLESSVKLDSIITV 157

[Close]

BLAST of Cucsat.G4275.T2 vs. NCBI nr
Match: XP_023546079.1 (COBW domain-containing protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 293 bits (751), Expect = 9.97e-97
Identity = 150/157 (95.54%), Postives = 155/157 (98.73%), Query Frame = 0


Query: 1   MEDE-DPPLAVEIGETITAVQQHEDDGVSVGVTVITGYLGAGKSTLVNYVLNSQHGKRIA 60
           MEDE DPPLAVEIGETITA ++HEDDGVSVGVTVITGYLGAGKSTLVNY+LNSQHGKRIA
Sbjct: 1   MEDEEDPPLAVEIGETITAAERHEDDGVSVGVTVITGYLGAGKSTLVNYILNSQHGKRIA 60

Query: 61  VILNEFGEEIGIERAMINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLD 120
           VILNEFGEEIG+ERAMINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLD
Sbjct: 61  VILNEFGEEIGVERAMINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLD 120

Query: 121 HILLETTGLANPAPLASVLWLDDQLESSIKLDSIITV 156
           HILLETTGLANPAPLASVLWLDDQLESS+KLDSIITV
Sbjct: 121 HILLETTGLANPAPLASVLWLDDQLESSVKLDSIITV 157

[Close]

BLAST of Cucsat.G4275.T2 vs. NCBI nr
Match: XP_022962150.1 (COBW domain-containing protein 1 [Cucurbita moschata])

HSP 1 Score: 293 bits (751), Expect = 9.97e-97
Identity = 150/157 (95.54%), Postives = 155/157 (98.73%), Query Frame = 0


Query: 1   MEDE-DPPLAVEIGETITAVQQHEDDGVSVGVTVITGYLGAGKSTLVNYVLNSQHGKRIA 60
           MEDE DPPLAVEIGETITA ++HEDDGVSVGVTVITGYLGAGKSTLVNY+LNSQHGKRIA
Sbjct: 1   MEDEEDPPLAVEIGETITAAERHEDDGVSVGVTVITGYLGAGKSTLVNYILNSQHGKRIA 60

Query: 61  VILNEFGEEIGIERAMINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLD 120
           VILNEFGEEIG+ERAMINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLD
Sbjct: 61  VILNEFGEEIGVERAMINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLD 120

Query: 121 HILLETTGLANPAPLASVLWLDDQLESSIKLDSIITV 156
           HILLETTGLANPAPLASVLWLDDQLESS+KLDSIITV
Sbjct: 121 HILLETTGLANPAPLASVLWLDDQLESSVKLDSIITV 157

[Close]

BLAST of Cucsat.G4275.T2 vs. ExPASy TrEMBL
Match: A0A0A0KFM6 (CobW C-terminal domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G366420 PE=3 SV=1)

HSP 1 Score: 303 bits (777), Expect = 5.51e-101
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MEDEDPPLAVEIGETITAVQQHEDDGVSVGVTVITGYLGAGKSTLVNYVLNSQHGKRIAV 60
           MEDEDPPLAVEIGETITAVQQHEDDGVSVGVTVITGYLGAGKSTLVNYVLNSQHGKRIAV
Sbjct: 1   MEDEDPPLAVEIGETITAVQQHEDDGVSVGVTVITGYLGAGKSTLVNYVLNSQHGKRIAV 60

Query: 61  ILNEFGEEIGIERAMINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDH 120
           ILNEFGEEIGIERAMINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDH
Sbjct: 61  ILNEFGEEIGIERAMINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDH 120

Query: 121 ILLETTGLANPAPLASVLWLDDQLESSIKLDSIITV 156
           ILLETTGLANPAPLASVLWLDDQLESSIKLDSIITV
Sbjct: 121 ILLETTGLANPAPLASVLWLDDQLESSIKLDSIITV 156

[Close]

BLAST of Cucsat.G4275.T2 vs. ExPASy TrEMBL
Match: A0A6J1K8W5 (COBW domain-containing protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111492164 PE=3 SV=1)

HSP 1 Score: 293 bits (751), Expect = 4.83e-97
Identity = 150/157 (95.54%), Postives = 155/157 (98.73%), Query Frame = 0


Query: 1   MEDE-DPPLAVEIGETITAVQQHEDDGVSVGVTVITGYLGAGKSTLVNYVLNSQHGKRIA 60
           MEDE DPPLAVEIGETITA ++HEDDGVSVGVTVITGYLGAGKSTLVNY+LNSQHGKRIA
Sbjct: 1   MEDEEDPPLAVEIGETITAAERHEDDGVSVGVTVITGYLGAGKSTLVNYILNSQHGKRIA 60

Query: 61  VILNEFGEEIGIERAMINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLD 120
           VILNEFGEEIG+ERAMINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLD
Sbjct: 61  VILNEFGEEIGVERAMINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLD 120

Query: 121 HILLETTGLANPAPLASVLWLDDQLESSIKLDSIITV 156
           HILLETTGLANPAPLASVLWLDDQLESS+KLDSIITV
Sbjct: 121 HILLETTGLANPAPLASVLWLDDQLESSVKLDSIITV 157

[Close]

BLAST of Cucsat.G4275.T2 vs. ExPASy TrEMBL
Match: A0A6J1HE98 (COBW domain-containing protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111462688 PE=3 SV=1)

HSP 1 Score: 293 bits (751), Expect = 4.83e-97
Identity = 150/157 (95.54%), Postives = 155/157 (98.73%), Query Frame = 0


Query: 1   MEDE-DPPLAVEIGETITAVQQHEDDGVSVGVTVITGYLGAGKSTLVNYVLNSQHGKRIA 60
           MEDE DPPLAVEIGETITA ++HEDDGVSVGVTVITGYLGAGKSTLVNY+LNSQHGKRIA
Sbjct: 1   MEDEEDPPLAVEIGETITAAERHEDDGVSVGVTVITGYLGAGKSTLVNYILNSQHGKRIA 60

Query: 61  VILNEFGEEIGIERAMINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLD 120
           VILNEFGEEIG+ERAMINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLD
Sbjct: 61  VILNEFGEEIGVERAMINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLD 120

Query: 121 HILLETTGLANPAPLASVLWLDDQLESSIKLDSIITV 156
           HILLETTGLANPAPLASVLWLDDQLESS+KLDSIITV
Sbjct: 121 HILLETTGLANPAPLASVLWLDDQLESSVKLDSIITV 157

[Close]

BLAST of Cucsat.G4275.T2 vs. ExPASy TrEMBL
Match: A0A1S4DVA6 (COBW domain-containing protein 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488574 PE=3 SV=1)

HSP 1 Score: 293 bits (751), Expect = 4.98e-97
Identity = 151/157 (96.18%), Postives = 154/157 (98.09%), Query Frame = 0


Query: 1   MEDE-DPPLAVEIGETITAVQQHEDDGVSVGVTVITGYLGAGKSTLVNYVLNSQHGKRIA 60
           MEDE DPPLAVEIGET+TA QQHED GVSVGVTVITGYLGAGKSTLVNY+LNSQHGKRIA
Sbjct: 1   MEDEEDPPLAVEIGETVTATQQHEDGGVSVGVTVITGYLGAGKSTLVNYILNSQHGKRIA 60

Query: 61  VILNEFGEEIGIERAMINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLD 120
           VILNEFGEEIG+ERAMINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLD
Sbjct: 61  VILNEFGEEIGVERAMINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLD 120

Query: 121 HILLETTGLANPAPLASVLWLDDQLESSIKLDSIITV 156
           HILLETTGLANPAPLASVLWLDDQLESSIKLDSIITV
Sbjct: 121 HILLETTGLANPAPLASVLWLDDQLESSIKLDSIITV 157

[Close]

BLAST of Cucsat.G4275.T2 vs. ExPASy TrEMBL
Match: A0A5A7VCN1 (COBW domain-containing protein 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00610 PE=3 SV=1)

HSP 1 Score: 293 bits (751), Expect = 5.14e-97
Identity = 151/157 (96.18%), Postives = 154/157 (98.09%), Query Frame = 0


Query: 1   MEDE-DPPLAVEIGETITAVQQHEDDGVSVGVTVITGYLGAGKSTLVNYVLNSQHGKRIA 60
           MEDE DPPLAVEIGET+TA QQHED GVSVGVTVITGYLGAGKSTLVNY+LNSQHGKRIA
Sbjct: 1   MEDEEDPPLAVEIGETVTATQQHEDGGVSVGVTVITGYLGAGKSTLVNYILNSQHGKRIA 60

Query: 61  VILNEFGEEIGIERAMINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLD 120
           VILNEFGEEIG+ERAMINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLD
Sbjct: 61  VILNEFGEEIGVERAMINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLD 120

Query: 121 HILLETTGLANPAPLASVLWLDDQLESSIKLDSIITV 156
           HILLETTGLANPAPLASVLWLDDQLESSIKLDSIITV
Sbjct: 121 HILLETTGLANPAPLASVLWLDDQLESSIKLDSIITV 157

[Close]

BLAST of Cucsat.G4275.T2 vs. TAIR 10
Match: AT1G26520.1 (Cobalamin biosynthesis CobW-like protein )

HSP 1 Score: 252.7 bits (644), Expect = 2.0e-67
Identity = 124/156 (79.49%), Postives = 142/156 (91.03%), Query Frame = 0


Query: 2   EDEDPPLAVEIGETITAVQQH-EDDGVSVGVTVITGYLGAGKSTLVNYVLNSQHGKRIAV 61
           +DE+PP+AV+I   ++  + H   D VSVGV+VITGYLGAGKSTLVNY+LN +HGKRIAV
Sbjct: 14  DDEEPPMAVQIHPDVSVGKVHSSSDTVSVGVSVITGYLGAGKSTLVNYILNGKHGKRIAV 73

Query: 62  ILNEFGEEIGIERAMINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDH 121
           ILNEFGEEIG+ERAMINEG+ GA+VEEWVELANGC+CCTVKHSLVQALEQLVQRK+RLDH
Sbjct: 74  ILNEFGEEIGVERAMINEGEEGAIVEEWVELANGCVCCTVKHSLVQALEQLVQRKDRLDH 133

Query: 122 ILLETTGLANPAPLASVLWLDDQLESSIKLDSIITV 157
           ILLETTGLANPAPLAS+LWLDDQLES +KLD I+TV
Sbjct: 134 ILLETTGLANPAPLASILWLDDQLESEVKLDCIVTV 169

[Close]

BLAST of Cucsat.G4275.T2 vs. TAIR 10
Match: AT1G15730.1 (Cobalamin biosynthesis CobW-like protein )

HSP 1 Score: 128.3 bits (321), Expect = 5.6e-30
Identity = 68/153 (44.44%), Postives = 102/153 (66.67%), Query Frame = 0


Query: 5   DPPLAVEIGETITAVQQHEDDGVSVGVTVITGYLGAGKSTLVNYVLNSQHGKRIAVILNE 64
           D  LAV   E I  V         +  T+ITG+LG+GK+TL+N++L   HGKRIAVI NE
Sbjct: 68  DSSLAVVDDEDIFDVASEILPDNRIPATIITGFLGSGKTTLLNHILTGDHGKRIAVIENE 127

Query: 65  FGEEIGIERAMINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQ-RKERLDHILL 124
           FG E+ I+ +++     GA  E+ + L NGC+CCTV+  LV+ + ++VQ +K R DHI++
Sbjct: 128 FG-EVDIDGSLVAAQTAGA--EDIMMLNNGCLCCTVRGDLVRMISEMVQTKKGRFDHIVI 187

Query: 125 ETTGLANPAPLASVLWLDDQLESSIKLDSIITV 157
           ETTGLANPAP+    + +D++ + +KLD ++T+
Sbjct: 188 ETTGLANPAPIIQTFYAEDEIFNDVKLDGVVTL 217

[Close]

BLAST of Cucsat.G4275.T2 vs. TAIR 10
Match: AT1G80480.1 (plastid transcriptionally active 17 )

HSP 1 Score: 123.2 bits (308), Expect = 1.8e-28
Identity = 60/129 (46.51%), Postives = 94/129 (72.87%), Query Frame = 0


Query: 29  VGVTVITGYLGAGKSTLVNYVLNSQHGKRIAVILNEFGEEIGIERAMINEGDGGALVEEW 88
           +  T+ITG+LG+GK+TL+N++L   HGKRIAVI NEFG E+ I+ +++     GA  E+ 
Sbjct: 89  IPATIITGFLGSGKTTLLNHILTRDHGKRIAVIENEFG-EVDIDGSLVASKSIGA--EDI 148

Query: 89  VELANGCICCTVKHSLVQALEQLVQ-RKERLDHILLETTGLANPAPLASVLWLDDQLESS 148
           V L NGC+CCTV+  LV+ + +LV  +K + DHI++ETTGLANPAP+    + ++++ + 
Sbjct: 149 VMLNNGCLCCTVRGDLVRMIGELVNTKKGKFDHIVIETTGLANPAPIIQTFYAEEEIFND 208

Query: 149 IKLDSIITV 157
           +KLD ++T+
Sbjct: 209 VKLDGVVTL 214

The following BLAST results are available for this feature:

BLAST of Cucsat.G4275.T2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9BRT8	4.9e-39	52.60	COBW domain-containing protein 1 OS=Homo sapiens OX=9606 GN=CBWD1 PE=1 SV=1	[more]
Q8IUF1	2.5e-38	51.30	COBW domain-containing protein 2 OS=Homo sapiens OX=9606 GN=CBWD2 PE=2 SV=1	[more]
Q8VEH6	1.6e-37	52.94	COBW domain-containing protein 1 OS=Mus musculus OX=10090 GN=Cbwd1 PE=1 SV=1	[more]
Q5JTY5	2.1e-37	51.30	COBW domain-containing protein 3 OS=Homo sapiens OX=9606 GN=CBWD3 PE=1 SV=1	[more]
Q4V339	2.1e-37	51.30	COBW domain-containing protein 6 OS=Homo sapiens OX=9606 GN=CBWD6 PE=3 SV=1	[more]

BLAST of Cucsat.G4275.T2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031742495.1	1.14e-100	100.00	COBW domain-containing protein 1-like [Cucumis sativus] >XP_031742496.1 COBW dom...	[more]
XP_031742511.1	4.60e-100	98.72	COBW domain-containing protein 1 [Cucumis sativus]	[more]
KAG7029568.1	7.49e-98	95.54	COBW domain-containing protein 1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023546079.1	9.97e-97	95.54	COBW domain-containing protein 1 [Cucurbita pepo subsp. pepo]	[more]
XP_022962150.1	9.97e-97	95.54	COBW domain-containing protein 1 [Cucurbita moschata]	[more]

BLAST of Cucsat.G4275.T2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFM6	5.51e-101	100.00	CobW C-terminal domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G36...	[more]
A0A6J1K8W5	4.83e-97	95.54	COBW domain-containing protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111492164 PE=...	[more]
A0A6J1HE98	4.83e-97	95.54	COBW domain-containing protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111462688 P...	[more]
A0A1S4DVA6	4.98e-97	96.18	COBW domain-containing protein 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488...	[more]
A0A5A7VCN1	5.14e-97	96.18	COBW domain-containing protein 1 isoform X1 OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of Cucsat.G4275.T2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26520.1	2.0e-67	79.49	Cobalamin biosynthesis CobW-like protein	[more]
AT1G15730.1	5.6e-30	44.44	Cobalamin biosynthesis CobW-like protein	[more]
AT1G80480.1	1.8e-28	46.51	plastid transcriptionally active 17	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003495	CobW/HypB/UreG, nucleotide-binding domain	PFAM	PF02492	cobW	coord: 31..156 e-value: 5.2E-40 score: 136.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 28..158 e-value: 4.1E-47 score: 162.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 30..156
None	No IPR available	PANTHER	PTHR13748	COBW-RELATED	coord: 20..156
None	No IPR available	PANTHER	PTHR13748:SF31	COBW DOMAIN-CONTAINING PROTEIN 1-RELATED	coord: 20..156
None	No IPR available	CDD	cd03112	CobW-like	coord: 31..156 e-value: 4.04164E-64 score: 193.121

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G4275	Cucsat.G4275	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G4275.T2.E1	Cucsat.G4275.T2.E1	exon
Cucsat.G4275.T2.E2	Cucsat.G4275.T2.E2	exon
Cucsat.G4275.T2.E3	Cucsat.G4275.T2.E3	exon
Cucsat.G4275.T2.E4	Cucsat.G4275.T2.E4	exon
Cucsat.G4275.T2.E5	Cucsat.G4275.T2.E5	exon
Cucsat.G4275.T2.E6	Cucsat.G4275.T2.E6	exon
Cucsat.G4275.T2.E7	Cucsat.G4275.T2.E7	exon
Cucsat.G4275.T2.E8	Cucsat.G4275.T2.E8	exon
Cucsat.G4275.T2.E9	Cucsat.G4275.T2.E9	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G4275.T2.C3	Cucsat.G4275.T2.C3	CDS
Cucsat.G4275.T2.C2	Cucsat.G4275.T2.C2	CDS
Cucsat.G4275.T2.C1	Cucsat.G4275.T2.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G4275.T2	Cucsat.G4275.T2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm