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Cucsat.G3725.T9 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TTCGAGTGTGAGGTTCAAATAATATCACGAATCACGCTGTCAAACCGTATTCCCCACCGGAGGGAGTTGGGGTTTAGGGTTTCAAACTTTCAATTTTCAACCTTCTAAACCTTTTTAGGTCTTTTGTCGTCCACTTTGGGCGTCTCTGTTCCAAAATACTTTGGAGAGGGAAAAATCAAATTCCCAAGTCCCCTCGCCTCTCTAATTCTCTAATCCAATCGATCAGTTCGAAGCAGAGTTCGACCATTTTCTCAAGGTGATTCTCCTAATCTCTCCTCCATTTTCTCATTGCCTTTTCCAAGTTTTCTGCATTTCGTATACTTGAACTCCACTTTTGTGTTATTTGAACAATTGAATTAATATTTCCCAGCGGCTATGGACTTTTCGACCCAGTTGAACTATATAGTGTTTTAGCTGATCTATTGTTTCTTGATTTATTATAAAGTTCTAGATTGCTTCCTCAGAATTCGTATTTATTGGGTTTGTTCTGGAACCTTGATTCTCCCAACCCCCCCTGCATCTGCTAGTTCTTTAATCGAGCTCACACAGACTGTTTGGCGGTTTAATTATTAGAACTTAAACGTTCGTTTTTTCAAATTTGTTTTGTCGAAGGGAAATTTCATTTTCTGTTCCTATGCAGTTGAGATATATCTTTCTTTGAAATCATGAATACCACTGTGCATAGAACTCCCAATTCTGGGAGCCGGTCATTGTTCTACCAAGATTTAGCATCACCTGTTACGACGCGGAAAGGAAAATTTTCAACTCCAGGCCAGGCAGCTGCTGTTTCTGCTTTATGGCGGGAGAATTTTGGAAACTCAGATCTTCCTCCTCCTCCAGTTTTCACTTTGGAAGACCGCTCGGTTTCAGATTTTTCTCCCGAGTCTGGGATTCCTGATTATCCTGTTTCCCCAGAAACTAAATCAGACCCCAGGACCCCTATCCGAAGGCATGACTTCTCTTCGCCGACAAAAAACAAGTCAAATGCCAGCACTTCTTATACACCAATCAGTGGACAACAAAGCCGTCAGGGATCGGCTGGCTTTAGTTGGTGGTCAACATCGAAAGGTGGTGGGAGCGAGCAAGAAGATAAGGGAAAAAGTTCACCAGTCGAAGGTGTTATTCAACCTGGTGCATTAATCACACTTCCAACCCCGAGGGAAGTTGCCAGACCGGAGGTGCAAAGGAATTGCTTGCCTTTAGCAAAACTCAATGAAGAGGAATGGGTTACTGTCTATGGGTGAGTTGTCTATTTCCTTTCTTCCTTCTCACATCATCGTTAGCTGTGGTTTTTATCTTTGAATTTGAATGATTCATTTACCATCTTTGAGTTTTGCCTTATTGATTACATTTTTTTAATCTACATATTAAACAGCTAACCAATTTTCTTTTGAGTCATCTTAAAGTTCCCTAATCACGTTGTGGACGATCAAAGTGGTTTTCGTATGTATGATATGGTTTATGCAGCCTTGCCTTGACATTTCTCTCAGATGAATCTTTCTCTTACATGCACCCACATTTCATTCCTGCACGCAAAAACATGTTCGCATATTGAATGTTGCTTCAAAATCAATTTGATATTAAACATCTTCAATTTGGAAGCGTTTTAAGCCTGTTCTTATAGCTTGCTTTCCTTCTTGTCGAAATGAATGAGCATGCTTCATTTGTTTGACTTGGAAGGAAGTACCCTAGCTGCTTAGGTTTACCTCAGTGGCAATGCTGTGGTAATTTATTGCAGGCTGCATTTATATTAGTTTTGATACGGGATTACTTGAACAAGATTTATTCTATAGATTAACAACGGTGCCCTTGAGTTCTAAAGTGAGGTTGGTTTTGATAGAAGCAATTTAAATTGTTAGTGTTGAGTATTTGATAAGAAGCGATTCTGTTACTGATTTCAAATGTTATTTATTAATTATATTATTTGTTGTTCTCTTTCTTCAGATTTTCCCCTGCTGATACAAATCTAGTTTTGAGGGAGTTTGAAAAATGCGGTGAGATCTTAAAACACCTTCCTGGTCCAAGAGACGCTAATTGGATGCACATTCTTTATCAGGTACCAATGCATCTCTGTTTCCTAGCTTTATTTGACTGGTTTTCTTGGTTTTATGTTCTTTTTGTTTTAGATTCTTCCAGTCAATCTGTTATTGTAAATCGGAATGGCTTTGTTGCTAGTTGTTAAATTTTGAAATCTTGTTAATTATGTATCAATTATTGTGAAAATAACAGCACAACATGTATTCATGGATGCTAGGAAAGGCATTAGGTTTGAAGTTCGTCATTGTTGTTTTTAGTTCAACGATATGGGGGTGGTGATTCAAACATCTACCGTTTGGTTAGGGTTTAATTGATACCTATTGCGTGTTTTGTTTGAATATTAACCTCATCAATCAAATTAATGCTTCATAATCAAGTCAAGACTTGACACTTTGACCAGTCGAAAGATACATATTACGTTGGGTATATGTAACTCATATAATATTCGTTTATGAGCAGGAAGACGCTATATTTCAACCTCTTAGAAATACTATTTACGTTATGAACATGTTTAATTTTGTTTCTGGTGCAGAACCGATCTGATGCTCAAAAGGCTCTCAATAAAAATGGTATTCAAATTAATGGGGTGCTAATTGTTGGTGTGAAACCAGTGGACCCAATGCATCGGCAGGCACTAGATGAAAGATTAAACAATCCAGGATTCATGGTTATCCCACCGGTATCATCTCGAACCTCAGAACTCCTTGCAACGAGAGGACCCATGCGTCCCTACAATCTTCAAAATGGTTACACTAGTGCACGGCACTCAGGAGGTGCCATAGCTTCACCATCGAAATCATTAGTATCTAAGGTCATGGATTTGATGTTTGGAGTCTAAGCTCCTCCTCTGTGGCAAGAAATTCCTTGAAATTTGAGAGCTTACACATTGATTTGACGTGATGTTATGGACTCTTATAACTGTGTGCAATGTTCACACTTCACCGTCCATCTTGATCTTTTGATTGTTTTTCCTGATTCTTACTCAAAATGAGACAGAAGGACATGAACATGATGCTAGAACATTTTTTGTTCCCTTGAAAACCAAACAAATATGAGAACCAGGTATATAAGTATATTTCCACTTCCCACCCTTTGAACTCTCCTCTTGCTGAACTTTTACAATAGGTTGAAATAACTCATTTCAAGCATGTGGGGTAACTTTGAGTTATTATAAATTATTAATGCATGCTACAACTCAACATTGTTACATGAGCAAATTTATTTGAGAAAATACATATAATATTATAAAGAAAATTACTTGGATGTATACTATTATTTATGTGTAACTCATTCAAAAATCAAATTATCAATTGTCAAGTGACAAGTTTGAGATGATAGAAATATTGGAGTATTGGAGTATTGGAGATCATAGAAATATTGGAGTATTCAAGGAAACATGATTTCTAAATATATAAAAAGGAATTGCAGAAAGAAATAGATGAAGGAGAAGAAGATCAAAAAGTGTTATAGTGAAGTAGAGAGAATCAAGTGCTCAAATAGAGAAGATAGAGGAATCGAGTAGAGAGAGTATTGAGTCGGTTGTTTATTATCATTTTAGTAAATTTACTTGAAAACGATGTAAGCATATTGCTAAAAGACTTGAGTTTTCTTAAGAACTATGTAAGCATATTGCTAAAAGACTTGAGTTTTCAAAAGGTAAGCTCATTTAGACTCTCAAAATTGACCGTCTGTTCCAAGAAAAACCTTTTTGCAATCGGTCTTTACTCTTTTCTTGCTTCTCAGTTGAATTATTTGTTTATTTCATAATATTTCTCTGTATTCTTCTTTCTTTTTCAAACCGACCGCCTGCGCTCTACTTCACCCAAAACCGATGAGAAACGTTGGCCGACCGACTACACTTACTTATTTATTTTTAATGCCTATTTATAAACTTTCTCCGCGAAAACACTCAGTCCCTCACGCTGGTCGTTAACTAAGACATAATCCTCTCTCCCTCACGCACTCAGAGACTCAGAAAGAATCTCACCGGAAAGATACGCCTGAAATTTTCTGAATGACTGGTGAACGAAAAATGCCGCCGGCGCCAGAGGCAGAAGTGCAGCTACCAGAGACGACTAAGGTGGCGGCTATCTCGTCCGAGAGCGGCAGGATCGGTAGACCGATGGAACCACCGGACCGAAGCTTCGACCGCCTGAGAGCCGATTTGTGTCAGTTCGCACTGAGGCTGGTTTGCATTGCCACGTCCACGACGACAGTGGCGTTGATGGTTACCGCCAAGGATTCTACCACTGTTACCATTTACGGATTTGAATTTCCCGTTCAATCGAAGTGGTCGTTCTCAGACGCATTCGAGTAAGTTACCGTTTGTAGTGTTTCTAGTTTAAGCCCTGGATGTTTTGGTGACTGAGTCAGTGGTTGTCTTGTAAAAAGAAAAACAGTTCAGGGGAGGAGCTGTGAGATCCATTAGTTCAATGGGTATGGTCTTTGGAGGAATGGTGCTCCCCTGTAACTATAATCACCGTTAAACTTTTAATTTCTTGTTCGTTCTGTTCTTCTTCAACTTTGAAATACCTTTTGGAAATCACAACGGATCCCAATAGGCAGAATTGGAAGACGAAATGATGAGGCTCGTGTTTTCTGTCGGCTTAAGGAGGAAACATCTTAGTGCTATGTTTTTTCATTTCTTAACTTGCTCTCTTGGCCCCCAAACAGAGTATTATTTAGTCCTGATTGTTTCCGATTGTTTTTTTTCAAAGAAAAACCATCACTCGTTAGCCTGCTTTAGAAAAATGCACTTTCTAGCTTACAGTTGATTTAGTCGCTTTTCTTCCGTTGAAATGTTGACAAATCTGCGCTCCTTCGAATATGAACAATGGAATCTGAAAAACCCTCTTCATCCACGTTTCATGGCTTGGTCTGAAATGAACCCGTGAAACCACCCGATTCCTGCTTTCCCCAAAATATTCCCCATTTCACGTTTGTCTTCTTCTGGGTCTGTTGTGACCCTCCATACAAAAGTTTGACCAACTAACTGACTATTGCTTAATGGGTTTGTCTTTCTTTATTATTCTTAGTGCATCCAATCGCGCCACGGTCACCGTAATGGGTTCTTTTTATAAAAGAAAAATTATTAAAGGGTAATAATAAGAATAAAAGAGTTTGTTCCATTTGTTTGTAGTTCATTATTATTAAAATGAACTTGCGCGTTGGGATTCTGGGGGTGTTTTTCAACGAGTTGAAAATGAAAGTAGTTGATTCCCCGTGAGTTTATGATGAGTGTAGGTACCTTGTTGGAGTTTCAGGGGCTGTCGCTGCCTACTCTTTGCTGCAGCTGCTTGTCACTGTTTCTATGCTCGCTAGGAGGTCCCCAGTGCTTAGCTCCAGAAGTCAAGCCTGGCTCATTTTCGCTGTTGATCTGGTAATTATTCTGTTCACTAGCTCATGGAAATGGTAGCATGTCGACTAAAAGAATTTCAGGGAGAAATATTTTGTTTTTTTTTGCCCTGTTTTTTTAATTAATTTATTTAATTTAAGGATAGATGTTGGTTGAAGTATCAATAGGATTAATACCTTAACTCATATGCCTAAGCTTTTGAATTTAGTGGTAAGTTAATATTGTATCAATATAAGTTCTGTGTTCTAACTTCCACTTTCTTCTCAATTTATACTGCACACATCAGCTTAATCAAGTTCTATAGTTCCCACCAATTTTAAGTACTAGCCATCTTTCCGGTTAATTAACAGTGAGAGAACTTTAGATAATTAATACGTTTGAGTTGATAGTTGTTTACTTGTTATTTTAGATAAATAGTTATTGAAAATGATGAGGTGCATATTCGACTGTATTTGTAGCTCACCCAAGTGTGCCAACTACTACTTGATAAACTTTTCTTTTCTATTGTTTTCAATAGTCTTTTTCTTTTTGCAATTGATGAGGATTCCAGCACTAAGTATTGCTCATTCGTTATTTATTATATTTTCTTGCTAGGCTATAAATTGTCACTTTGAAAATATTGGGCTAGAGGAGTTCGCTTGTCCATGACTAATAAAGATCACTTTTATGTCTTATTAACCTGTATATTTGTGCGGCCCTACGACGGAACAATTTCTTAATTTTCACAACTCCCTAGATTTTTTCTGCTCCACTCATAGCTTCAAACTCTCCTTTTTAAAGTCATGATAGTTGTTTAGAAGTTGATATATTGTTATCCGTATTCATGTTTGTGCTTCATAGCTTTAGAGTTGTAATAGCTAATATAAAGCTTTTGAAATCTTAATGAAATAAATTTTTGTTAATGGTAGGGCTCTCAACTTAGAGACGTACTTCTTGTGCTGAGCCATGAATTTGGCGTAATATTTTCTATCTTCTATTAGATCAATTAGTATTTAAACATTGTAGGATTAGATAGATGTGTTGTGACCTGTGAAATTAGTCAAGGAGAGCATGTTATTTCAAATTTCGGTTGTGTTGGTTGCAGGCCTTGGCATATGCATTGATGAGTGCTGGATCAGCTGCAGCTGGGATCTCAAATCTGAATCGTACTGGCATTCAACACACAGCTCTGCCTAACTTCTGTAAGCCATTACAACGCTTCTGTAACCATGTCGCCATCTCTATTGCCTTCACATTCTTTACATGTTGCTTGCTCACCACTTCTGCCATACAATATGTTATTTGGCTCTCCAAAAACTAAACCCCCTCATGAAAAACAAACAACTTGCTATCTCTGTGAAAAATATGACGTTCATTTCTGTTCCTTCAAGTCCCTTGAACGATCCATAAATCAAAAGGAACTTCTATGGTATAATGCATTGGAGTAGAGATGCCCATTTGACTCAGTGGTGGGGAATGCCGGATTAGACTACAAATTGGGGGGTTCTATTCCCACTCGGTGTCCATCCCTGCCTCGAATATATATATATTATTATAAGGTTTTAATTGTATATTTATATAATATTATTACTGTTCTTATTAATAATACTAAGTAGAGAATTGTTGTAATATTTAATCTTAATTTTGGGAAATTAAGAAGAACCATTTTAATAATACTAGATAACATTAACGCACTTATG ATGAATACCACTGTGCATAGAACTCCCAATTCTGGGAGCCGGTCATTGTTCTACCAAGATTTAGCATCACCTGTTACGACGCGGAAAGGAAAATTTTCAACTCCAGGCCAGGCAGCTGCTGTTTCTGCTTTATGGCGGGAGAATTTTGGAAACTCAGATCTTCCTCCTCCTCCAGTTTTCACTTTGGAAGACCGCTCGGTTTCAGATTTTTCTCCCGAGTCTGGGATTCCTGATTATCCTGTTTCCCCAGAAACTAAATCAGACCCCAGGACCCCTATCCGAAGGCATGACTTCTCTTCGCCGACAAAAAACAAGTCAAATGCCAGCACTTCTTATACACCAATCAGTGGACAACAAAGCCGTCAGGGATCGGCTGGCTTTAGTTGGTGGTCAACATCGAAAGGTGGTGGGAGCGAGCAAGAAGATAAGGGAAAAAGTTCACCAGTCGAAGGTGTTATTCAACCTGGTGCATTAATCACACTTCCAACCCCGAGGGAAGTTGCCAGACCGGAGGTGCAAAGGAATTGCTTGCCTTTAGCAAAACTCAATGAAGAGGAATGGGTTACTGTCTATGGATTTTCCCCTGCTGATACAAATCTAGTTTTGAGGGAGTTTGAAAAATGCGGTGAGATCTTAAAACACCTTCCTGGTCCAAGAGACGCTAATTGGATGCACATTCTTTATCAGAACCGATCTGATGCTCAAAAGGCTCTCAATAAAAATGGTATTCAAATTAATGGGGTGCTAATTGTTGGTGTGAAACCAGTGGACCCAATGCATCGGCAGGCACTAGATGAAAGATTAAACAATCCAGGATTCATGGTTATCCCACCGGTATCATCTCGAACCTCAGAACTCCTTGCAACGAGAGGACCCATGCGTCCCTACAATCTTCAAAATGGTTACACTAGTGCACGGCACTCAGGAGGTGCCATAGCTTCACCATCGAAATCATTAGTATCTAAGGTCATGGATTTGATGTTTGGAGTCTAA MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPISGQQSRQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPLAKLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGIQINGVLIVGVKPVDPMHRQALDERLNNPGFMVIPPVSSRTSELLATRGPMRPYNLQNGYTSARHSGGAIASPSKSLVSKVMDLMFGV Homology
BLAST of Cucsat.G3725.T9 vs. ExPASy Swiss-Prot
Match: O04326 (Nuclear pore complex protein NUP35 OS=Arabidopsis thaliana OX=3702 GN=NUP35 PE=1 SV=1) HSP 1 Score: 434.5 bits (1116), Expect = 1.1e-120 Identity = 226/334 (67.66%), Postives = 262/334 (78.44%), Query Frame = 0
BLAST of Cucsat.G3725.T9 vs. ExPASy Swiss-Prot
Match: Q6P6X9 (Nucleoporin NUP35 OS=Danio rerio OX=7955 GN=nup35 PE=1 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 1.9e-16 Identity = 56/177 (31.64%), Postives = 91/177 (51.41%), Query Frame = 0
BLAST of Cucsat.G3725.T9 vs. ExPASy Swiss-Prot
Match: Q8NFH5 (Nucleoporin NUP35 OS=Homo sapiens OX=9606 GN=NUP35 PE=1 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 1.6e-15 Identity = 99/341 (29.03%), Postives = 145/341 (42.52%), Query Frame = 0
BLAST of Cucsat.G3725.T9 vs. ExPASy Swiss-Prot
Match: Q68FY1 (Nucleoporin NUP35 OS=Rattus norvegicus OX=10116 GN=Nup35 PE=1 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 2.0e-13 Identity = 96/355 (27.04%), Postives = 143/355 (40.28%), Query Frame = 0
BLAST of Cucsat.G3725.T9 vs. ExPASy Swiss-Prot
Match: Q66IJ0 (Nucleoporin NUP35 OS=Xenopus tropicalis OX=8364 GN=nup35 PE=2 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 3.3e-13 Identity = 91/341 (26.69%), Postives = 147/341 (43.11%), Query Frame = 0
BLAST of Cucsat.G3725.T9 vs. NCBI nr
Match: XP_004141656.1 (nuclear pore complex protein NUP35 [Cucumis sativus] >KGN45595.1 hypothetical protein Csa_015598 [Cucumis sativus]) HSP 1 Score: 662 bits (1708), Expect = 6.39e-240 Identity = 329/330 (99.70%), Postives = 330/330 (100.00%), Query Frame = 0
BLAST of Cucsat.G3725.T9 vs. NCBI nr
Match: KAA0051033.1 (nuclear pore complex protein NUP35 [Cucumis melo var. makuwa] >TYK03828.1 nuclear pore complex protein NUP35 [Cucumis melo var. makuwa]) HSP 1 Score: 651 bits (1679), Expect = 1.69e-235 Identity = 323/330 (97.88%), Postives = 328/330 (99.39%), Query Frame = 0
BLAST of Cucsat.G3725.T9 vs. NCBI nr
Match: XP_008462444.1 (PREDICTED: nuclear pore complex protein NUP35 [Cucumis melo]) HSP 1 Score: 648 bits (1672), Expect = 1.97e-234 Identity = 322/330 (97.58%), Postives = 327/330 (99.09%), Query Frame = 0
BLAST of Cucsat.G3725.T9 vs. NCBI nr
Match: XP_038900103.1 (nuclear pore complex protein NUP35 [Benincasa hispida]) HSP 1 Score: 617 bits (1592), Expect = 3.07e-222 Identity = 308/330 (93.33%), Postives = 316/330 (95.76%), Query Frame = 0
BLAST of Cucsat.G3725.T9 vs. NCBI nr
Match: XP_022151212.1 (nuclear pore complex protein NUP35 [Momordica charantia]) HSP 1 Score: 603 bits (1555), Expect = 1.24e-216 Identity = 297/330 (90.00%), Postives = 312/330 (94.55%), Query Frame = 0
BLAST of Cucsat.G3725.T9 vs. ExPASy TrEMBL
Match: A0A0A0K7B2 (Nuclear pore complex protein NUP35 OS=Cucumis sativus OX=3659 GN=Csa_7G452990 PE=3 SV=1) HSP 1 Score: 662 bits (1708), Expect = 3.09e-240 Identity = 329/330 (99.70%), Postives = 330/330 (100.00%), Query Frame = 0
BLAST of Cucsat.G3725.T9 vs. ExPASy TrEMBL
Match: A0A5A7U592 (Nuclear pore complex protein NUP35 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00200 PE=3 SV=1) HSP 1 Score: 651 bits (1679), Expect = 8.16e-236 Identity = 323/330 (97.88%), Postives = 328/330 (99.39%), Query Frame = 0
BLAST of Cucsat.G3725.T9 vs. ExPASy TrEMBL
Match: A0A1S3CH09 (Nuclear pore complex protein NUP35 OS=Cucumis melo OX=3656 GN=LOC103500791 PE=3 SV=1) HSP 1 Score: 648 bits (1672), Expect = 9.52e-235 Identity = 322/330 (97.58%), Postives = 327/330 (99.09%), Query Frame = 0
BLAST of Cucsat.G3725.T9 vs. ExPASy TrEMBL
Match: A0A6J1DCV4 (Nuclear pore complex protein NUP35 OS=Momordica charantia OX=3673 GN=LOC111019186 PE=3 SV=1) HSP 1 Score: 603 bits (1555), Expect = 6.01e-217 Identity = 297/330 (90.00%), Postives = 312/330 (94.55%), Query Frame = 0
BLAST of Cucsat.G3725.T9 vs. ExPASy TrEMBL
Match: A0A6J1JYW9 (Nuclear pore complex protein NUP35 OS=Cucurbita maxima OX=3661 GN=LOC111488673 PE=3 SV=1) HSP 1 Score: 576 bits (1485), Expect = 3.11e-206 Identity = 288/331 (87.01%), Postives = 304/331 (91.84%), Query Frame = 0
BLAST of Cucsat.G3725.T9 vs. TAIR 10
Match: AT3G16310.1 (mitotic phosphoprotein N' end (MPPN) family protein ) HSP 1 Score: 434.5 bits (1116), Expect = 7.7e-122 Identity = 226/334 (67.66%), Postives = 262/334 (78.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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