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Cucsat.G3725.T5 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATCAAGTGCTCAAATAGAGAAGATAGAGGAATCGAGTAGAGAGAGTATTGAGTCGGTTGTTTATTATCATTTTAGTAAATTTACTTGAAAACGATGTAAGCATATTGCTAAAAGACTTGAGTTTTCTTAAGAACTATGTAAGCATATTGCTAAAAGACTTGAGTTTTCAAAAGGTAAGCTCATTTAGACTCTCAAAATTGACCGTCTGTTCCAAGAAAAACCTTTTTGCAATCGGTCTTTACTCTTTTCTTGCTTCTCAGTTGAATTATTTGTTTATTTCATAATATTTCTCTGTATTCTTCTTTCTTTTTCAAACCGACCGCCTGCGCTCTACTTCACCCAAAACCGATGAGAAACGTTGGCCGACCGACTACACTTACTTATTTATTTTTAATGCCTATTTATAAACTTTCTCCGCGAAAACACTCAGTCCCTCACGCTGGTCGTTAACTAAGACATAATCCTCTCTCCCTCACGCACTCAGAGACTCAGAAAGAATCTCACCGGAAAGATACGCCTGAAATTTTCTGAATGACTGGTGAACGAAAAATGCCGCCGGCGCCAGAGGCAGAAGTGCAGCTACCAGAGACGACTAAGGTGGCGGCTATCTCGTCCGAGAGCGGCAGGATCGGTAGACCGATGGAACCACCGGACCGAAGCTTCGACCGCCTGAGAGCCGATTTGTGTCAGTTCGCACTGAGGCTGGTTTGCATTGCCACGTCCACGACGACAGTGGCGTTGATGGTTACCGCCAAGGATTCTACCACTGTTACCATTTACGGATTTGAATTTCCCGTTCAATCGAAGTGGTCGTTCTCAGACGCATTCGAGTAAGTTACCGTTTGTAGTGTTTCTAGTTTAAGCCCTGGATGTTTTGGTGACTGAGTCAGTGGTTGTCTTGTAAAAAGAAAAACAGTTCAGGGGAGGAGCTGTGAGATCCATTAGTTCAATGGGTATGGTCTTTGGAGGAATGGTGCTCCCCTGTAACTATAATCACCGTTAAACTTTTAATTTCTTGTTCGTTCTGTTCTTCTTCAACTTTGAAATACCTTTTGGAAATCACAACGGATCCCAATAGGCAGAATTGGAAGACGAAATGATGAGGCTCGTGTTTTCTGTCGGCTTAAGGAGGAAACATCTTAGTGCTATGTTTTTTCATTTCTTAACTTGCTCTCTTGGCCCCCAAACAGAGTATTATTTAGTCCTGATTGTTTCCGATTGTTTTTTTTCAAAGAAAAACCATCACTCGTTAGCCTGCTTTAGAAAAATGCACTTTCTAGCTTACAGTTGATTTAGTCGCTTTTCTTCCGTTGAAATGTTGACAAATCTGCGCTCCTTCGAATATGAACAATGGAATCTGAAAAACCCTCTTCATCCACGTTTCATGGCTTGGTCTGAAATGAACCCGTGAAACCACCCGATTCCTGCTTTCCCCAAAATATTCCCCATTTCACGTTTGTCTTCTTCTGGGTCTGTTGTGACCCTCCATACAAAAGTTTGACCAACTAACTGACTATTGCTTAATGGGTTTGTCTTTCTTTATTATTCTTAGTGCATCCAATCGCGCCACGGTCACCGTAATGGGTTCTTTTTATAAAAGAAAAATTATTAAAGGGTAATAATAAGAATAAAAGAGTTTGTTCCATTTGTTTGTAGTTCATTATTATTAAAATGAACTTGCGCGTTGGGATTCTGGGGGTGTTTTTCAACGAGTTGAAAATGAAAGTAGTTGATTCCCCGTGAGTTTATGATGAGTGTAGGTACCTTGTTGGAGTTTCAGGGGCTGTCGCTGCCTACTCTTTGCTGCAGCTGCTTGTCACTGTTTCTATGCTCGCTAGGAGGTCCCCAGTGCTTAGCTCCAGAAGTCAAGCCTGGCTCATTTTCGCTGTTGATCTGGTAATTATTCTGTTCACTAGCTCATGGAAATGGTAGCATGTCGACTAAAAGAATTTCAGGGAGAAATATTTTGTTTTTTTTTGCCCTGTTTTTTTAATTAATTTATTTAATTTAAGGATAGATGTTGGTTGAAGTATCAATAGGATTAATACCTTAACTCATATGCCTAAGCTTTTGAATTTAGTGGTAAGTTAATATTGTATCAATATAAGTTCTGTGTTCTAACTTCCACTTTCTTCTCAATTTATACTGCACACATCAGCTTAATCAAGTTCTATAGTTCCCACCAATTTTAAGTACTAGCCATCTTTCCGGTTAATTAACAGTGAGAGAACTTTAGATAATTAATACGTTTGAGTTGATAGTTGTTTACTTGTTATTTTAGATAAATAGTTATTGAAAATGATGAGGTGCATATTCGACTGTATTTGTAGCTCACCCAAGTGTGCCAACTACTACTTGATAAACTTTTCTTTTCTATTGTTTTCAATAGTCTTTTTCTTTTTGCAATTGATGAGGATTCCAGCACTAAGTATTGCTCATTCGTTATTTATTATATTTTCTTGCTAGGCTATAAATTGTCACTTTGAAAATATTGGGCTAGAGGAGTTCGCTTGTCCATGACTAATAAAGATCACTTTTATGTCTTATTAACCTGTATATTTGTGCGGCCCTACGACGGAACAATTTCTTAATTTTCACAACTCCCTAGATTTTTTCTGCTCCACTCATAGCTTCAAACTCTCCTTTTTAAAGTCATGATAGTTGTTTAGAAGTTGATATATTGTTATCCGTATTCATGTTTGTGCTTCATAGCTTTAGAGTTGTAATAGCTAATATAAAGCTTTTGAAATCTTAATGAAATAAATTTTTGTTAATGGTAGGGCTCTCAACTTAGAGACGTACTTCTTGTGCTGAGCCATGAATTTGGCGTAATATTTTCTATCTTCTATTAGATCAATTAGTATTTAAACATTGTAGGATTAGATAGATGTGTTGTGACCTGTGAAATTAGTCAAGGAGAGCATGTTATTTCAAATTTCGGTTGTGTTGGTTGCAGGCCTTGGCATATGCATTGATGAGTGCTGGATCAGCTGCAGCTGGGATCTCAAATCTGAATCGTACTGGCATTCAACACACAGCTCTGCCTAACTTCTGTAAGCCATTACAACGCTTCTGTAACCATGTCGCCATCTCTATTGCCTTCACATTCTTTACATGTTGCTTGCTCACCACTTCTGCCATACAATATGTTATTTGGCTCTCCAAAAACTAAACCCCCTCATGAAAAACAAACAACTTGCTATCTCTGTGAAAAATATGACGTTCATTTCTGTTCCTTCAAGTCCCTTGAACGATCCATAAATCAAAAGGAACTTCTATGGTATAATGCATTGGAGTAGAGATGCCCATTTGACTCAGTGGTGGGGAATGCCGGATTAGACTACAAATTGGGGGGTTCTATTCCCACTCGGTGTCCATCCCTGCCTCGAATATATATATATTATTATAAGGTTTTAATTGTATATTTATATAATATTATTACTGTTCTTATTAATAATACTAAGTAGAGAATTGTTGTAATATTTAATCTTAATTTTGGGAAATTAAGAAGAACCATTTTAATAATACTAGATAACATTAACGCACTTATGAAAATAAAATAAGAAACATGTGGTTCTCTTGA ATGACTGGTGAACGAAAAATGCCGCCGGCGCCAGAGGCAGAAGTGCAGCTACCAGAGACGACTAAGGTGGCGGCTATCTCGTCCGAGAGCGGCAGGATCGGTAGACCGATGGAACCACCGGACCGAAGCTTCGACCGCCTGAGAGCCGATTTGTGTCAGTTCGCACTGAGGCTGGTTTGCATTGCCACGTCCACGACGACAGTGGCGTTGATGGTTACCGCCAAGGATTCTACCACTGTTACCATTTACGGATTTGAATTTCCCGTTCAATCGAAGTGGTCGTTCTCAGACGCATTCGAGTACCTTGTTGGAGTTTCAGGGGCTGTCGCTGCCTACTCTTTGCTGCAGCTGCTTGTCACTGTTTCTATGCTCGCTAGGAGGTCCCCAGTGCTTAGCTCCAGAAGTCAAGCCTGGCTCATTTTCGCTGTTGATCTGGCCTTGGCATATGCATTGATGAGTGCTGGATCAGCTGCAGCTGGGATCTCAAATCTGAATCGTACTGGCATTCAACACACAGCTCTGCCTAACTTCTGTAAGCCATTACAACGCTTCTGTAACCATGTCGCCATCTCTATTGCCTTCACATTCTTTACATGTTGCTTGCTCACCACTTCTGCCATACAATATGTTATTTGGCTCTCCAAAAACTAA MTGERKMPPAPEAEVQLPETTKVAAISSESGRIGRPMEPPDRSFDRLRADLCQFALRLVCIATSTTTVALMVTAKDSTTVTIYGFEFPVQSKWSFSDAFEYLVGVSGAVAAYSLLQLLVTVSMLARRSPVLSSRSQAWLIFAVDLALAYALMSAGSAAAGISNLNRTGIQHTALPNFCKPLQRFCNHVAISIAFTFFTCCLLTTSAIQYVIWLSKN Homology
BLAST of Cucsat.G3725.T5 vs. ExPASy Swiss-Prot
Match: A7P756 (CASP-like protein 3A1 OS=Vitis vinifera OX=29760 GN=VIT_09s0002g03780 PE=2 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 3.1e-60 Identity = 125/207 (60.39%), Postives = 160/207 (77.29%), Query Frame = 0
BLAST of Cucsat.G3725.T5 vs. ExPASy Swiss-Prot
Match: B9GXD6 (CASP-like protein 3A1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_553757 PE=3 SV=2) HSP 1 Score: 229.6 bits (584), Expect = 3.5e-59 Identity = 130/224 (58.04%), Postives = 165/224 (73.66%), Query Frame = 0
BLAST of Cucsat.G3725.T5 vs. ExPASy Swiss-Prot
Match: B9RQG7 (CASP-like protein 3A1 OS=Ricinus communis OX=3988 GN=RCOM_1491260 PE=2 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 8.5e-58 Identity = 125/213 (58.69%), Postives = 155/213 (72.77%), Query Frame = 0
BLAST of Cucsat.G3725.T5 vs. ExPASy Swiss-Prot
Match: B9GGL4 (CASP-like protein 3A2 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_751837 PE=2 SV=2) HSP 1 Score: 219.9 bits (559), Expect = 2.7e-56 Identity = 118/207 (57.00%), Postives = 153/207 (73.91%), Query Frame = 0
BLAST of Cucsat.G3725.T5 vs. ExPASy Swiss-Prot
Match: A9NN43 (CASP-like protein 3A1 OS=Picea sitchensis OX=3332 PE=2 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 5.5e-41 Identity = 86/171 (50.29%), Postives = 120/171 (70.18%), Query Frame = 0
BLAST of Cucsat.G3725.T5 vs. NCBI nr
Match: XP_011659686.1 (CASP-like protein 3A1 [Cucumis sativus] >KGN45596.1 hypothetical protein Csa_016220 [Cucumis sativus]) HSP 1 Score: 407 bits (1047), Expect = 5.58e-143 Identity = 215/216 (99.54%), Postives = 215/216 (99.54%), Query Frame = 0
BLAST of Cucsat.G3725.T5 vs. NCBI nr
Match: KAA0051032.1 (CASP-like protein 3A1 [Cucumis melo var. makuwa] >TYK03827.1 CASP-like protein 3A1 [Cucumis melo var. makuwa]) HSP 1 Score: 379 bits (974), Expect = 7.48e-132 Identity = 199/216 (92.13%), Postives = 207/216 (95.83%), Query Frame = 0
BLAST of Cucsat.G3725.T5 vs. NCBI nr
Match: XP_008462445.1 (PREDICTED: CASP-like protein 3A1 [Cucumis melo]) HSP 1 Score: 378 bits (970), Expect = 3.04e-131 Identity = 198/216 (91.67%), Postives = 207/216 (95.83%), Query Frame = 0
BLAST of Cucsat.G3725.T5 vs. NCBI nr
Match: KAG7025825.1 (CASP-like protein 3A1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 339 bits (869), Expect = 7.44e-116 Identity = 177/216 (81.94%), Postives = 192/216 (88.89%), Query Frame = 0
BLAST of Cucsat.G3725.T5 vs. NCBI nr
Match: XP_038899301.1 (CASP-like protein 3A1 [Benincasa hispida]) HSP 1 Score: 338 bits (867), Expect = 1.50e-115 Identity = 179/215 (83.26%), Postives = 191/215 (88.84%), Query Frame = 0
BLAST of Cucsat.G3725.T5 vs. ExPASy TrEMBL
Match: A0A0A0KCU6 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_7G453000 PE=3 SV=1) HSP 1 Score: 407 bits (1047), Expect = 2.70e-143 Identity = 215/216 (99.54%), Postives = 215/216 (99.54%), Query Frame = 0
BLAST of Cucsat.G3725.T5 vs. ExPASy TrEMBL
Match: A0A5A7U5A3 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00190 PE=3 SV=1) HSP 1 Score: 379 bits (974), Expect = 3.62e-132 Identity = 199/216 (92.13%), Postives = 207/216 (95.83%), Query Frame = 0
BLAST of Cucsat.G3725.T5 vs. ExPASy TrEMBL
Match: A0A1S3CGY3 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103500792 PE=3 SV=1) HSP 1 Score: 378 bits (970), Expect = 1.47e-131 Identity = 198/216 (91.67%), Postives = 207/216 (95.83%), Query Frame = 0
BLAST of Cucsat.G3725.T5 vs. ExPASy TrEMBL
Match: A0A6J1HHN1 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111464155 PE=3 SV=1) HSP 1 Score: 335 bits (859), Expect = 1.20e-114 Identity = 176/216 (81.48%), Postives = 190/216 (87.96%), Query Frame = 0
BLAST of Cucsat.G3725.T5 vs. ExPASy TrEMBL
Match: A0A6J1KMH1 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111494645 PE=3 SV=1) HSP 1 Score: 334 bits (857), Expect = 2.42e-114 Identity = 175/216 (81.02%), Postives = 189/216 (87.50%), Query Frame = 0
BLAST of Cucsat.G3725.T5 vs. TAIR 10
Match: AT3G16300.1 (Uncharacterised protein family (UPF0497) ) HSP 1 Score: 161.4 bits (407), Expect = 8.2e-40 Identity = 92/216 (42.59%), Postives = 132/216 (61.11%), Query Frame = 0
BLAST of Cucsat.G3725.T5 vs. TAIR 10
Match: AT1G79780.1 (Uncharacterised protein family (UPF0497) ) HSP 1 Score: 146.0 bits (367), Expect = 3.6e-35 Identity = 78/165 (47.27%), Postives = 105/165 (63.64%), Query Frame = 0
BLAST of Cucsat.G3725.T5 vs. TAIR 10
Match: AT3G06390.1 (Uncharacterised protein family (UPF0497) ) HSP 1 Score: 48.9 bits (115), Expect = 5.9e-06 Identity = 46/192 (23.96%), Postives = 87/192 (45.31%), Query Frame = 0
BLAST of Cucsat.G3725.T5 vs. TAIR 10
Match: AT3G55390.1 (Uncharacterised protein family (UPF0497) ) HSP 1 Score: 47.0 bits (110), Expect = 2.3e-05 Identity = 36/105 (34.29%), Postives = 51/105 (48.57%), Query Frame = 0
BLAST of Cucsat.G3725.T5 vs. TAIR 10
Match: AT4G15610.1 (Uncharacterised protein family (UPF0497) ) HSP 1 Score: 45.4 bits (106), Expect = 6.6e-05 Identity = 43/166 (25.90%), Postives = 73/166 (43.98%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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