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Cucsat.G3725.T12 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CTTCACCCAAAACCGATGAGAAACGTTGGCCGACCGACTACACTTACTTATTTATTTTTAATGCCTATTTATAAACTTTCTCCGCGAAAACACTCAGTCCCTCACGCTGGTCGTTAACTAAGACATAATCCTCTCTCCCTCACGCACTCAGAGACTCAGAAAGAATCTCACCGGAAAGATACGCCTGAAATTTTCTGAATGACTGGTGAACGAAAAATGCCGCCGGCGCCAGAGGCAGAAGTGCAGCTACCAGAGACGACTAAGGTGGCGGCTATCTCGTCCGAGAGCGGCAGGATCGGTAGACCGATGGAACCACCGGACCGAAGCTTCGACCGCCTGAGAGCCGATTTGTGTCAGTTCGCACTGAGGCTGGTTTGCATTGCCACGTCCACGACGACAGTGGCGTTGATGGTTACCGCCAAGGATTCTACCACTGTTACCATTTACGGATTTGAATTTCCCGTTCAATCGAAGTGGTCGTTCTCAGACGCATTCGAGTAAGTTACCGTTTGTAGTGTTTCTAGTTTAAGCCCTGGATGTTTTGGTGACTGAGTCAGTGGTTGTCTTGTAAAAAGAAAAACAGTTCAGGGGAGGAGCTGTGAGATCCATTAGTTCAATGGGTATGGTCTTTGGAGGAATGGTGCTCCCCTGTAACTATAATCACCGTTAAACTTTTAATTTCTTGTTCGTTCTGTTCTTCTTCAACTTTGAAATACCTTTTGGAAATCACAACGGATCCCAATAGGCAGAATTGGAAGACGAAATGATGAGGCTCGTGTTTTCTGTCGGCTTAAGGAGGAAACATCTTAGTGCTATGTTTTTTCATTTCTTAACTTGCTCTCTTGGCCCCCAAACAGAGTATTATTTAGTCCTGATTGTTTCCGATTGTTTTTTTTCAAAGAAAAACCATCACTCGTTAGCCTGCTTTAGAAAAATGCACTTTCTAGCTTACAGTTGATTTAGTCGCTTTTCTTCCGTTGAAATGTTGACAAATCTGCGCTCCTTCGAATATGAACAATGGAATCTGAAAAACCCTCTTCATCCACGTTTCATGGCTTGGTCTGAAATGAACCCGTGAAACCACCCGATTCCTGCTTTCCCCAAAATATTCCCCATTTCACGTTTGTCTTCTTCTGGGTCTGTTGTGACCCTCCATACAAAAGTTTGACCAACTAACTGACTATTGCTTAATGGGTTTGTCTTTCTTTATTATTCTTAGTGCATCCAATCGCGCCACGGTCACCGTAATGGGTTCTTTTTATAAAAGAAAAATTATTAAAGGGTAATAATAAGAATAAAAGAGTTTGTTCCATTTGTTTGTAGTTCATTATTATTAAAATGAACTTGCGCGTTGGGATTCTGGGGGTGTTTTTCAACGAGTTGAAAATGAAAGTAGTTGATTCCCCGTGAGTTTATGATGAGTGTAGGTACCTTGTTGGAGTTTCAGGGGCTGTCGCTGCCTACTCTTTGCTGCAGCTGCTTGTCACTGTTTCTATGCTCGCTAGGAGGTCCCCAGTGCTTAGCTCCAGAAGTCAAGCCTGGCTCATTTTCGCTGTTGATCTGGTAATTATTCTGTTCACTAGCTCATGGAAATGGTAGCATGTCGACTAAAAGAATTTCAGGGAGAAATATTTTGTTTTTTTTTGCCCTGTTTTTTTAATTAATTTATTTAATTTAAGGATAGATGTTGGTTGAAGTATCAATAGGATTAATACCTTAACTCATATGCCTAAGCTTTTGAATTTAGTGGTAAGTTAATATTGTATCAATATAAGTTCTGTGTTCTAACTTCCACTTTCTTCTCAATTTATACTGCACACATCAGCTTAATCAAGTTCTATAGTTCCCACCAATTTTAAGTACTAGCCATCTTTCCGGTTAATTAACAGTGAGAGAACTTTAGATAATTAATACGTTTGAGTTGATAGTTGTTTACTTGTTATTTTAGATAAATAGTTATTGAAAATGATGAGGTGCATATTCGACTGTATTTGTAGCTCACCCAAGTGTGCCAACTACTACTTGATAAACTTTTCTTTTCTATTGTTTTCAATAGTCTTTTTCTTTTTGCAATTGATGAGGATTCCAGCACTAAGTATTGCTCATTCGTTATTTATTATATTTTCTTGCTAGGCTATAAATTGTCACTTTGAAAATATTGGGCTAGAGGAGTTCGCTTGTCCATGACTAATAAAGATCACTTTTATGTCTTATTAACCTGTATATTTGTGCGGCCCTACGACGGAACAATTTCTTAATTTTCACAACTCCCTAGATTTTTTCTGCTCCACTCATAGCTTCAAACTCTCCTTTTTAAAGTCATGATAGTTGTTTAGAAGTTGATATATTGTTATCCGTATTCATGTTTGTGCTTCATAGCTTTAGAGTTGTAATAGCTAATATAAAGCTTTTGAAATCTTAATGAAATAAATTTTTGTTAATGGTAGGGCTCTCAACTTAGAGACGTACTTCTTGTGCTGAGCCATGAATTTGGCGTAATATTTTCTATCTTCTATTAGATCAATTAGTATTTAAACATTGTAGGATTAGATAGATGTGTTGTGACCTGTGAAATTAGTCAAGGAGAGCATGTTATTTCAAATTTCGGTTGTGTTGGTTGCAGGCCTTGGCATATGCATTGATGAGTGCTGGATCAGCTGCAGCTGGGATCTCAAATCTGAATCGTACTGGCATTCAACACACAGCTCTGCCTAACTTCTGTAAGCCATTACAACGCTTCTGTAACCATGTCGCCATCTCTATTGCCTTCACATTCTTTACATGTTGCTTGCTCACCACTTCTGCCATACAATATGTTATTTGGCTCTCCAAAAACTAAACCCCCTCATGAAAAACAAACAACTTGCTATCTCTGTGAAAAATATGACGTTCATTTCTGTTCCTTCAAGTCCCTTGAACGATCCATAAATCAAAAGGAACTTCTATGGTATAATGCATTGGAGTAGAGATGCCCATTTGACTCAGTGGTGGGGAATGCCGGATTAGACTACAAATTGGGGGGTTCTATTCCCACTCGGTGTCCATCCCTGCCTCGAATATATATATATTATTATAAGGTTTTAATTGTATATTTATATAATATTATTACTGTTCTTATTAATAATACTAAGTAGAGAATTGTTGTAATATTTAATCTTAATTTTGGGAAATTAAGAAGAACCATTTTAATAATACTAGATAACATTAACGCACTTATGAAAATAAAATAAGAAACATGTGGTTCTCTTGA ATGACTGGTGAACGAAAAATGCCGCCGGCGCCAGAGGCAGAAGTGCAGCTACCAGAGACGACTAAGGTGGCGGCTATCTCGTCCGAGAGCGGCAGGATCGGTAGACCGATGGAACCACCGGACCGAAGCTTCGACCGCCTGAGAGCCGATTTGTGTCAGTTCGCACTGAGGCTGGTTTGCATTGCCACGTCCACGACGACAGTGGCGTTGATGGTTACCGCCAAGGATTCTACCACTGTTACCATTTACGGATTTGAATTTCCCGTTCAATCGAAGTGGTCGTTCTCAGACGCATTCGAGGGCTGTCGCTGCCTACTCTTTGCTGCAGCTGCTTGTCACTGTTTCTATGCTCGCTAG MTGERKMPPAPEAEVQLPETTKVAAISSESGRIGRPMEPPDRSFDRLRADLCQFALRLVCIATSTTTVALMVTAKDSTTVTIYGFEFPVQSKWSFSDAFEGCRCLLFAAAACHCFYAR Homology
BLAST of Cucsat.G3725.T12 vs. ExPASy Swiss-Prot
Match: A7P756 (CASP-like protein 3A1 OS=Vitis vinifera OX=29760 GN=VIT_09s0002g03780 PE=2 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 1.2e-13 Identity = 43/92 (46.74%), Postives = 60/92 (65.22%), Query Frame = 0
BLAST of Cucsat.G3725.T12 vs. ExPASy Swiss-Prot
Match: B9GXD6 (CASP-like protein 3A1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_553757 PE=3 SV=2) HSP 1 Score: 72.0 bits (175), Expect = 5.0e-12 Identity = 48/108 (44.44%), Postives = 65/108 (60.19%), Query Frame = 0
BLAST of Cucsat.G3725.T12 vs. ExPASy Swiss-Prot
Match: B9RQG7 (CASP-like protein 3A1 OS=Ricinus communis OX=3988 GN=RCOM_1491260 PE=2 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.2e-10 Identity = 43/97 (44.33%), Postives = 57/97 (58.76%), Query Frame = 0
BLAST of Cucsat.G3725.T12 vs. ExPASy Swiss-Prot
Match: B9GGL4 (CASP-like protein 3A2 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_751837 PE=2 SV=2) HSP 1 Score: 64.7 bits (156), Expect = 8.0e-10 Identity = 39/91 (42.86%), Postives = 54/91 (59.34%), Query Frame = 0
BLAST of Cucsat.G3725.T12 vs. ExPASy Swiss-Prot
Match: Q3EB59 (CASP-like protein 3A1 OS=Arabidopsis thaliana OX=3702 GN=At3g16300 PE=3 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 8.3e-07 Identity = 34/98 (34.69%), Postives = 51/98 (52.04%), Query Frame = 0
BLAST of Cucsat.G3725.T12 vs. NCBI nr
Match: XP_011659686.1 (CASP-like protein 3A1 [Cucumis sativus] >KGN45596.1 hypothetical protein Csa_016220 [Cucumis sativus]) HSP 1 Score: 194 bits (494), Expect = 1.70e-60 Identity = 99/100 (99.00%), Postives = 99/100 (99.00%), Query Frame = 0
BLAST of Cucsat.G3725.T12 vs. NCBI nr
Match: KAA0051032.1 (CASP-like protein 3A1 [Cucumis melo var. makuwa] >TYK03827.1 CASP-like protein 3A1 [Cucumis melo var. makuwa]) HSP 1 Score: 174 bits (440), Expect = 2.68e-52 Identity = 88/100 (88.00%), Postives = 93/100 (93.00%), Query Frame = 0
BLAST of Cucsat.G3725.T12 vs. NCBI nr
Match: XP_008462445.1 (PREDICTED: CASP-like protein 3A1 [Cucumis melo]) HSP 1 Score: 172 bits (436), Expect = 1.08e-51 Identity = 87/100 (87.00%), Postives = 93/100 (93.00%), Query Frame = 0
BLAST of Cucsat.G3725.T12 vs. NCBI nr
Match: XP_038899301.1 (CASP-like protein 3A1 [Benincasa hispida]) HSP 1 Score: 147 bits (370), Expect = 1.08e-41 Identity = 75/100 (75.00%), Postives = 83/100 (83.00%), Query Frame = 0
BLAST of Cucsat.G3725.T12 vs. NCBI nr
Match: XP_022151223.1 (CASP-like protein 3A1 [Momordica charantia]) HSP 1 Score: 143 bits (360), Expect = 3.51e-40 Identity = 72/100 (72.00%), Postives = 82/100 (82.00%), Query Frame = 0
BLAST of Cucsat.G3725.T12 vs. ExPASy TrEMBL
Match: A0A0A0KCU6 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_7G453000 PE=3 SV=1) HSP 1 Score: 194 bits (494), Expect = 8.23e-61 Identity = 99/100 (99.00%), Postives = 99/100 (99.00%), Query Frame = 0
BLAST of Cucsat.G3725.T12 vs. ExPASy TrEMBL
Match: A0A5A7U5A3 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00190 PE=3 SV=1) HSP 1 Score: 174 bits (440), Expect = 1.30e-52 Identity = 88/100 (88.00%), Postives = 93/100 (93.00%), Query Frame = 0
BLAST of Cucsat.G3725.T12 vs. ExPASy TrEMBL
Match: A0A1S3CGY3 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103500792 PE=3 SV=1) HSP 1 Score: 172 bits (436), Expect = 5.25e-52 Identity = 87/100 (87.00%), Postives = 93/100 (93.00%), Query Frame = 0
BLAST of Cucsat.G3725.T12 vs. ExPASy TrEMBL
Match: A0A6J1DBL6 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111019195 PE=3 SV=1) HSP 1 Score: 143 bits (360), Expect = 1.70e-40 Identity = 72/100 (72.00%), Postives = 82/100 (82.00%), Query Frame = 0
BLAST of Cucsat.G3725.T12 vs. ExPASy TrEMBL
Match: A0A6J1HHN1 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111464155 PE=3 SV=1) HSP 1 Score: 135 bits (340), Expect = 1.78e-37 Identity = 68/100 (68.00%), Postives = 80/100 (80.00%), Query Frame = 0
BLAST of Cucsat.G3725.T12 vs. TAIR 10
Match: AT3G16300.1 (Uncharacterised protein family (UPF0497) ) HSP 1 Score: 54.7 bits (130), Expect = 5.9e-08 Identity = 34/98 (34.69%), Postives = 51/98 (52.04%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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