Cucsat.G3605.T1 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G3605.T1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Receptor-like serine/threonine-protein kinase
Location	ctg1047: 137413 .. 138903 (-)
RNA-Seq Expression	Cucsat.G3605.T1
Synteny	Cucsat.G3605.T1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAAACAAGAAGATGGGAACGGCGGGTGTGAGATATGGAAGTCAGGAGCCAAGATTATTGTGATGGATGAAGGTGAAAGAGAGGGTTGGTTTCTAAACGGAGAAGAGTCGTCGGACCCTCCGGCGCCAAGTCCACACCCCTATCCATATAACTATAGAAACGGTAATTAAGTTAACTAGTTTACATCAAACTTCTGATTTAACACCTAATTTCATTACAATTTCCATACTAAAATTTCATTTTTACTCATAAATTAATTAATAGATTTCTTATCAACATTGATGCATATTTACGAGTAAAAAATTTTCAAAAACTTAGTCTAAGATTAATAATTAAGAAAGTATTTGAACGAAAGAGTGAGGTATTATGAGAAATGGTAAAAAAAAAAAAATTTGATAAAATATTTACAAGATATAGCAAAAAATTTTAGATTCTATCAATAATAGACACCGATATGTTTCTATCGATGACATTCATAGAATTTTATCAATTTCTATCATTGATATAAAAAATTAAAATTTTTACTATAGTTCGTAAATATTTTAGTTTATTTTGCTATTTTTTAAAATGTCTCAAGTTTCTCCATGTATAGACGACTTAATTGGTTTAGAAGTAAATAGTAAACACACGTATCTAATTCAAATTTTAAATAGCATTTACGGTAGCAAAAGAGGTGACAAAATATTTTTCCTTTGGACGCATATGGAACGACTTTATAAATCTTTATAAACATTTTTCTTTTTACATCTAATTTTAAACACTTAGATAGTGAATTCGAACATGTAGTAGAAAATATTAGCATTTCTAGCCATATTAGATTAAATAGAAATGGCATTTTATTTATTTATGAGTATTTATAAAAGATATACCAAATATGTTTGTGATATTTAATATCAATGTATGAACCTTTTAATTTATGTATATATCAACAACACTATGCTATGTTTGCTATTACTTTTGTGGCTTAATTATTATTATTATTTTGCTATTTCTTATGTACTAAGAAAAAATATATTCATGCTTTGGTTTTGGGGGTTTTCCTTTCTTATGAAAAATATCAAAACCATATTTGAAAAAATAATTACAATCATTATAAGAATGAAGATCAATCAATAATCTTCGAGAAAGAAAAAAGAAACAAACTTTCTTAATATATATTATAGTCAGTAGAAACTGCTGCTATATCTATCTAGCTAACTTAAGATTTTGAATTTGCTTAGGAAAAATGGAGGTTTGGGTGCAAGTGACTATCGGTCTAGCCGTTTCTACAATTTTTCTTCTACTATGTTTTATAATATACGCAAATTGGAGAACACAAATAGTCGAAGGTAAATCTATTTCAGTCATTTTATTTTAAATTTTCATTGGATATATATTATAATTACTATGAATAATTTGACAATATATTATTGTATTTGTGTCTAAATCCCACAGTTATAGGAAAATTCAAGAAATGTTTTCTACGTAGGATGTGGGTCATAACCGAAGATT

Coding sequence (CDS)

AAACAAGAAGATGGGAACGGCGGGTGTGAGATATGGAAGTCAGGAGCCAAGATTATTGTGATGGATGAAGGTGAAAGAGAGGGTTGGTTTCTAAACGGAGAAGAGTCGTCGGACCCTCCGGCGCCAAGTCCACACCCCTATCCATATAACTATAGAAACGGAAAAATGGAGGTTTGGGTGCAAGTGACTATCGGTCTAGCCGTTTCTACAATTTTTCTTCTACTATGTTTTATAATATACGCAAATTGGAGAACACAAATAGTCGAAGTTATAGGAAAATTCAAGAAATGTTTTCTACGTAGGATGTGGGTCATAACCGAAGAT

Protein sequence

KQEDGNGGCEIWKSGAKIIVMDEGEREGWFLNGEESSDPPAPSPHPYPYNYRNGKMEVWVQVTIGLAVSTIFLLLCFIIYANWRTQIVEVIGKFKKCFLRRMWVITED

Homology

[Close]

BLAST of Cucsat.G3605.T1 vs. NCBI nr
Match: KAE8646466.1 (hypothetical protein Csa_016807 [Cucumis sativus])

HSP 1 Score: 228 bits (581), Expect = 1.03e-67
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 1   KQEDGNGGCEIWKSGAKIIVMDEGEREGWFLNGEESSDPPAPSPHPYPYNYRNGKMEVWV 60
           KQEDGNGGCEIWKSGAKIIVMDEGEREGWFLNGEESSDPPAPSPHPYP NYRNGKMEVWV
Sbjct: 378 KQEDGNGGCEIWKSGAKIIVMDEGEREGWFLNGEESSDPPAPSPHPYPCNYRNGKMEVWV 437

Query: 61  QVTIGLAVSTIFLLLCFIIYANWRTQIVEVIGKFKKCFLRRMWVITED 108
           QVTIGLAVSTIFLLLCFIIYANWRTQIVEVIGKFKKCFLRRMWVITED
Sbjct: 438 QVTIGLAVSTIFLLLCFIIYANWRTQIVEVIGKFKKCFLRRMWVITED 485

[Close]

BLAST of Cucsat.G3605.T1 vs. NCBI nr
Match: XP_016902850.1 (PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g67520 isoform X4 [Cucumis melo])

HSP 1 Score: 207 bits (528), Expect = 9.57e-61
Identity = 95/108 (87.96%), Postives = 103/108 (95.37%), Query Frame = 0


Query: 1   KQEDGNGGCEIWKSGAKIIVMDEGEREGWFLNGEESSDPPAPSPHPYPYNYRNGKMEVWV 60
           K EDGNGGCEIWKSGAKI++MDEG+R+GWFL+GEES DPPAPSPHPYPYNY NGKMEVWV
Sbjct: 358 KLEDGNGGCEIWKSGAKIVLMDEGQRQGWFLDGEES-DPPAPSPHPYPYNYGNGKMEVWV 417

Query: 61  QVTIGLAVSTIFLLLCFIIYANWRTQIVEVIGKFKKCFLRRMWVITED 108
            VTIGLA+STIFLLLCFIIYANWRTQI+EV+GKFKKCFLRRMW ITED
Sbjct: 418 PVTIGLALSTIFLLLCFIIYANWRTQIIEVLGKFKKCFLRRMWFITED 464

[Close]

BLAST of Cucsat.G3605.T1 vs. NCBI nr
Match: XP_016902849.1 (PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g67520 isoform X3 [Cucumis melo])

HSP 1 Score: 207 bits (528), Expect = 2.96e-60
Identity = 95/108 (87.96%), Postives = 103/108 (95.37%), Query Frame = 0


Query: 1   KQEDGNGGCEIWKSGAKIIVMDEGEREGWFLNGEESSDPPAPSPHPYPYNYRNGKMEVWV 60
           K EDGNGGCEIWKSGAKI++MDEG+R+GWFL+GEES DPPAPSPHPYPYNY NGKMEVWV
Sbjct: 358 KLEDGNGGCEIWKSGAKIVLMDEGQRQGWFLDGEES-DPPAPSPHPYPYNYGNGKMEVWV 417

Query: 61  QVTIGLAVSTIFLLLCFIIYANWRTQIVEVIGKFKKCFLRRMWVITED 108
            VTIGLA+STIFLLLCFIIYANWRTQI+EV+GKFKKCFLRRMW ITED
Sbjct: 418 PVTIGLALSTIFLLLCFIIYANWRTQIIEVLGKFKKCFLRRMWFITED 464

[Close]

BLAST of Cucsat.G3605.T1 vs. NCBI nr
Match: XP_016902848.1 (PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g67520 isoform X2 [Cucumis melo])

HSP 1 Score: 207 bits (528), Expect = 2.99e-60
Identity = 95/108 (87.96%), Postives = 103/108 (95.37%), Query Frame = 0


Query: 1   KQEDGNGGCEIWKSGAKIIVMDEGEREGWFLNGEESSDPPAPSPHPYPYNYRNGKMEVWV 60
           K EDGNGGCEIWKSGAKI++MDEG+R+GWFL+GEES DPPAPSPHPYPYNY NGKMEVWV
Sbjct: 358 KLEDGNGGCEIWKSGAKIVLMDEGQRQGWFLDGEES-DPPAPSPHPYPYNYGNGKMEVWV 417

Query: 61  QVTIGLAVSTIFLLLCFIIYANWRTQIVEVIGKFKKCFLRRMWVITED 108
            VTIGLA+STIFLLLCFIIYANWRTQI+EV+GKFKKCFLRRMW ITED
Sbjct: 418 PVTIGLALSTIFLLLCFIIYANWRTQIIEVLGKFKKCFLRRMWFITED 464

[Close]

BLAST of Cucsat.G3605.T1 vs. NCBI nr
Match: XP_016902847.1 (PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g67520 isoform X1 [Cucumis melo])

HSP 1 Score: 207 bits (528), Expect = 3.18e-60
Identity = 95/108 (87.96%), Postives = 103/108 (95.37%), Query Frame = 0


Query: 1   KQEDGNGGCEIWKSGAKIIVMDEGEREGWFLNGEESSDPPAPSPHPYPYNYRNGKMEVWV 60
           K EDGNGGCEIWKSGAKI++MDEG+R+GWFL+GEES DPPAPSPHPYPYNY NGKMEVWV
Sbjct: 358 KLEDGNGGCEIWKSGAKIVLMDEGQRQGWFLDGEES-DPPAPSPHPYPYNYGNGKMEVWV 417

Query: 61  QVTIGLAVSTIFLLLCFIIYANWRTQIVEVIGKFKKCFLRRMWVITED 108
            VTIGLA+STIFLLLCFIIYANWRTQI+EV+GKFKKCFLRRMW ITED
Sbjct: 418 PVTIGLALSTIFLLLCFIIYANWRTQIIEVLGKFKKCFLRRMWFITED 464

[Close]

BLAST of Cucsat.G3605.T1 vs. ExPASy TrEMBL
Match: A0A1S4E4E8 (Receptor-like serine/threonine-protein kinase OS=Cucumis melo OX=3656 GN=LOC103500798 PE=3 SV=1)

HSP 1 Score: 207 bits (528), Expect = 4.63e-61
Identity = 95/108 (87.96%), Postives = 103/108 (95.37%), Query Frame = 0


Query: 1   KQEDGNGGCEIWKSGAKIIVMDEGEREGWFLNGEESSDPPAPSPHPYPYNYRNGKMEVWV 60
           K EDGNGGCEIWKSGAKI++MDEG+R+GWFL+GEES DPPAPSPHPYPYNY NGKMEVWV
Sbjct: 358 KLEDGNGGCEIWKSGAKIVLMDEGQRQGWFLDGEES-DPPAPSPHPYPYNYGNGKMEVWV 417

Query: 61  QVTIGLAVSTIFLLLCFIIYANWRTQIVEVIGKFKKCFLRRMWVITED 108
            VTIGLA+STIFLLLCFIIYANWRTQI+EV+GKFKKCFLRRMW ITED
Sbjct: 418 PVTIGLALSTIFLLLCFIIYANWRTQIIEVLGKFKKCFLRRMWFITED 464

[Close]

BLAST of Cucsat.G3605.T1 vs. ExPASy TrEMBL
Match: A0A1S4E3P5 (Receptor-like serine/threonine-protein kinase OS=Cucumis melo OX=3656 GN=LOC103500798 PE=3 SV=1)

HSP 1 Score: 207 bits (528), Expect = 1.43e-60
Identity = 95/108 (87.96%), Postives = 103/108 (95.37%), Query Frame = 0


Query: 1   KQEDGNGGCEIWKSGAKIIVMDEGEREGWFLNGEESSDPPAPSPHPYPYNYRNGKMEVWV 60
           K EDGNGGCEIWKSGAKI++MDEG+R+GWFL+GEES DPPAPSPHPYPYNY NGKMEVWV
Sbjct: 358 KLEDGNGGCEIWKSGAKIVLMDEGQRQGWFLDGEES-DPPAPSPHPYPYNYGNGKMEVWV 417

Query: 61  QVTIGLAVSTIFLLLCFIIYANWRTQIVEVIGKFKKCFLRRMWVITED 108
            VTIGLA+STIFLLLCFIIYANWRTQI+EV+GKFKKCFLRRMW ITED
Sbjct: 418 PVTIGLALSTIFLLLCFIIYANWRTQIIEVLGKFKKCFLRRMWFITED 464

[Close]

BLAST of Cucsat.G3605.T1 vs. ExPASy TrEMBL
Match: A0A1S4E3P4 (Receptor-like serine/threonine-protein kinase OS=Cucumis melo OX=3656 GN=LOC103500798 PE=3 SV=1)

HSP 1 Score: 207 bits (528), Expect = 1.45e-60
Identity = 95/108 (87.96%), Postives = 103/108 (95.37%), Query Frame = 0


Query: 1   KQEDGNGGCEIWKSGAKIIVMDEGEREGWFLNGEESSDPPAPSPHPYPYNYRNGKMEVWV 60
           K EDGNGGCEIWKSGAKI++MDEG+R+GWFL+GEES DPPAPSPHPYPYNY NGKMEVWV
Sbjct: 358 KLEDGNGGCEIWKSGAKIVLMDEGQRQGWFLDGEES-DPPAPSPHPYPYNYGNGKMEVWV 417

Query: 61  QVTIGLAVSTIFLLLCFIIYANWRTQIVEVIGKFKKCFLRRMWVITED 108
            VTIGLA+STIFLLLCFIIYANWRTQI+EV+GKFKKCFLRRMW ITED
Sbjct: 418 PVTIGLALSTIFLLLCFIIYANWRTQIIEVLGKFKKCFLRRMWFITED 464

[Close]

BLAST of Cucsat.G3605.T1 vs. ExPASy TrEMBL
Match: A0A1S4E3P7 (Receptor-like serine/threonine-protein kinase OS=Cucumis melo OX=3656 GN=LOC103500798 PE=3 SV=1)

HSP 1 Score: 207 bits (528), Expect = 1.54e-60
Identity = 95/108 (87.96%), Postives = 103/108 (95.37%), Query Frame = 0


Query: 1   KQEDGNGGCEIWKSGAKIIVMDEGEREGWFLNGEESSDPPAPSPHPYPYNYRNGKMEVWV 60
           K EDGNGGCEIWKSGAKI++MDEG+R+GWFL+GEES DPPAPSPHPYPYNY NGKMEVWV
Sbjct: 358 KLEDGNGGCEIWKSGAKIVLMDEGQRQGWFLDGEES-DPPAPSPHPYPYNYGNGKMEVWV 417

Query: 61  QVTIGLAVSTIFLLLCFIIYANWRTQIVEVIGKFKKCFLRRMWVITED 108
            VTIGLA+STIFLLLCFIIYANWRTQI+EV+GKFKKCFLRRMW ITED
Sbjct: 418 PVTIGLALSTIFLLLCFIIYANWRTQIIEVLGKFKKCFLRRMWFITED 464

[Close]

BLAST of Cucsat.G3605.T1 vs. ExPASy TrEMBL
Match: A0A0A0K7B0 (Apple domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G446800 PE=4 SV=1)

HSP 1 Score: 119 bits (299), Expect = 1.88e-31
Identity = 53/54 (98.15%), Postives = 53/54 (98.15%), Query Frame = 0


Query: 1   KQEDGNGGCEIWKSGAKIIVMDEGEREGWFLNGEESSDPPAPSPHPYPYNYRNG 54
           KQEDGNGGCEIWKSGAKIIVMDEGEREGWFLNGEESSDPPAPSPHPYP NYRNG
Sbjct: 163 KQEDGNGGCEIWKSGAKIIVMDEGEREGWFLNGEESSDPPAPSPHPYPCNYRNG 216

The following BLAST results are available for this feature:

BLAST of Cucsat.G3605.T1 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G3605.T1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8646466.1	1.03e-67	99.07	hypothetical protein Csa_016807 [Cucumis sativus]	[more]
XP_016902850.1	9.57e-61	87.96	PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g675...	[more]
XP_016902849.1	2.96e-60	87.96	PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g675...	[more]
XP_016902848.1	2.99e-60	87.96	PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g675...	[more]
XP_016902847.1	3.18e-60	87.96	PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g675...	[more]

BLAST of Cucsat.G3605.T1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E4E8	4.63e-61	87.96	Receptor-like serine/threonine-protein kinase OS=Cucumis melo OX=3656 GN=LOC1035...	[more]
A0A1S4E3P5	1.43e-60	87.96	Receptor-like serine/threonine-protein kinase OS=Cucumis melo OX=3656 GN=LOC1035...	[more]
A0A1S4E3P4	1.45e-60	87.96	Receptor-like serine/threonine-protein kinase OS=Cucumis melo OX=3656 GN=LOC1035...	[more]
A0A1S4E3P7	1.54e-60	87.96	Receptor-like serine/threonine-protein kinase OS=Cucumis melo OX=3656 GN=LOC1035...	[more]
A0A0A0K7B0	1.88e-31	98.15	Apple domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G446800 PE=4 ...	[more]

BLAST of Cucsat.G3605.T1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G3605	Cucsat.G3605	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G3605.T1.E1	Cucsat.G3605.T1.E1	exon
Cucsat.G3605.T1.E2	Cucsat.G3605.T1.E2	exon
Cucsat.G3605.T1.E3	Cucsat.G3605.T1.E3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G3605.T1.C3	Cucsat.G3605.T1.C3	CDS
Cucsat.G3605.T1.C2	Cucsat.G3605.T1.C2	CDS
Cucsat.G3605.T1.C1	Cucsat.G3605.T1.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G3605.T1	Cucsat.G3605.T1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0030246	carbohydrate binding
molecular_function	GO:0106310	protein serine kinase activity
molecular_function	GO:0004674	protein serine/threonine kinase activity
molecular_function	GO:0004712	protein serine/threonine/tyrosine kinase activity