Cucsat.G19562.T7 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TGGGAGAGGATGAAGAAAGAGAAAAGGAAAATGGATTAAAAGTCTGATTTTGATATCTCTCTCTCTCTCTCTCTCTATCTGTTCTGTCATCCCTTCTCTTTCCTCTGCTGCTTTTTGAAGGTTTGAGAGGAGAAGTCGCTTTAATACGCCATTTCACCATTTCTGCCTCTTCCTAAAACCTCCATGGCCGAAACTCTCGCACCCCATTTCCTCAAACTTCCTTCTCCTCAACATAGAGAACAACCCATTATTCAATCAAATCTTTTTCTATTCATATTTCTCCATTTTTAGCCCTTCTCTTCTCTTCTCTTAACCCACCATGAAAACCCATTCCCAAACATTCGTTCCTTTTCCCATTTCAAATCTCTTTTATTGCTTTCTTACTCCTCACACAAAATACCCTTCTCTAATGCCACCGTATTGGAAGGGTATCCGCTAGCTGGACTTTCCTTTTTTGCATTTTCGACCTTTTCTCTCTGTTTCCCTCTGTTTTTTTTCCCTCTGTTTTTGAGTTTTCGCCATGGAGAATGATACTGCTCGCAAAGCTTCTATTCCATGGTATGTCTTTTTCATTTTCAGCTTTTCTTTTGCTTTGTTGAAGATTTTGGGGGGTTTTGGTATTTTAAATTTTGCATGTTCTATTCGGTGGTGGAGCTTAGAAGGTGGATTTTGGTTTCTGGGTGGGTGTTGTTTGGCCATTTCTAGTGGCAAATTACATTCCCTTTTGGATTCACGTGCTGTGGAAATGGTGATTCTGTGAATATCTTGTTTCTTTTTGTCCTCTTTGTTGTTGGCCTCTTTTGGCTTGCTTGAGACTTTTGGCCCCTTTGTTGGGAAGATGGGGATTTCCCAAATTCCCCCATGTTTTTGTTTCTTCAACTTTTTCCTTTTTGGTAAAGTGGGACAAGAGAGTTGGCTTTTTCTGAAGTGAGAAATGTTGTAATCTGTTTTTGTCTTTTGATTTGTTTGATCACTTGAGATTTGAGAATGATTGTGTTGAGGTGTATTAACTTTATACTTTTATATGTGAAAAGTGAAGAATAGTTAATTAAATTGAAAACAATTATAACCAGGAAACATTTAAGATTTGTTGTGGGGGAATGGGGATGGCCTTCCAATTTTAAAGTACAAAAGCAATACTAAACTGAGTCATTGCATTTGTTGTGGTCACAAGCATAATCACCCTTTTTTGGGATGTTTGGAGGGGAAGTTTTGAAGGTTCTGGTTTTGAGCCCTCATTGAAAATTCTTGATGACTCTTATACTTGATGTCGGGGTAGTTAAAGTTGGTATAAGTAAAACAATTACTTGTGGTGTCTCCATTCGGATTTTGGAAACTCATTGCAACATTTACACTATTTGTTGGGATTTTGACTATTCTGAATTCTTTGTTGCTTCATAGGGAGAATGATAGGGGTATCGGTGAAGTAGCCAAAAGACCTCCACTTTACATGGCTACTTTTTGGGAAACATAAAATGCGGAGCAATATGATTTCATCTGCTTCGGCTCGAGGTGGTATCTGTTTGTTTTTTGTTTTTGTTTTTGTGTGCTCATATAGTGCATCATTTAGGCTGATGAATTATGGCATTTGTGTGCTGTGTTTTGTAGAGTTGAGATGTTTTGACCTGGAAAGTGAGCAACGTGATGGATTGTCCCCAAGAGGAGTTTTGGAAGCAAGCTTGCAGAGTTCAGAATTCGATGCGGATTCTTTGAATGATAGTACCCCAGAACCAGAAAATCAACCTTCACAATCAGGGGCTCTTTTTCACTGGAAAAATTTCTTCAAACTATGGAAGAAAAGATCGTTCAGGCGCCTGGCCTCGTTTCCTCCTCTCGGAGTGCTGAAGATTTCAAGAAGAGGGAACAGAAGCGGGAGAGAGAATCCGGGACTAAGTGACTTGTACAAGTTCAAGTCCTCATTGGGAAACTTTACTTTCTCCGAGCTCCAAACTGCGACCAACAAATTTAGCCATGGTTGGTTGCTATTTGTGTTTTATGTACTTTTTAGTCTAACTTTGGTGTCAATTTTGTTTATTGTGTTTTTTTTTCTTTTGCGTAGAAAATTTGATCGGAAAAGGTGGTTATGCTGAGGTATACAAGGGCCGTTTACATGATGGGCAATTGATAGCAGTGAAGAGGCTAACTAAAGGAGCCCCAGATGACAGAACTGCTTGTTTCTTGTCCGAGATTGGCATCATTGCTCATATCGATCATCCTAACACAGCCAAACTGATCGGTTGCGGCATTGATGGAGGCATGCACCTTGTTTTCAAGTTATCTCCAAATGGAAGTTTAGGATCTTTTCTCCATGGTGATTCCTTTAACCTCGTTGAACTAACTGCTCTTTGGTTTTCAGAATTCTTATTCACCCTTCTCTTCACCATTTTTCAGGTCCAAATGCAAACAAACTTGATTGGAGTAAAAGATACAAGATTGCTCTTGGTACAGCTGATGGTCTGCTGTATCTCCACGATCATTGTCAGAGGCGTATTATTCATCGAGATATCAAGGCCGATAACATTCTGCTTACAGAAGATTTTGTACCTCAGGTAACTTGCATGTTCTAAATATCAAATTCATTATTGAAGCTTTTACTTGCTCACACATGTTGCTAGAAACACCTTTTCGATTTTTGCCCTCTTTGTTTTAATACTACTACTACTGGGGGAGCTATGTCAACGACACAAACAAAATTATAGGGGAAAAAATATTTTGGCCCCTCGTGTCTTCGTCGAATGGAAAATGTCAATGAAAAAATTATTTTTCATGCTTCTATTAAAGTTGAAATGACAGGGAAGACCAGTAAAGTCTACTTTATTCCTCTAGCCTTTTATCTTATTTCATGATTGAGATCATTCTATACTCAAATGAATGCAGATTTGTGACTTTGGCCTTGCAAAGTGGTTACCCAAACAGTGGACTCACTACAGCGTGTCAAAATTTGAAGGCACCTTCGGGTCAGTATTATGCCTACATTCTTCTCCTTGACGTAACCATTTTTTTTTCTCTTGTTAAATTTCTCATCTCTTCAATGCAGATACTTTGCTCCTGAATATTTCATGCATGGGATAGTTGATGAGAAAACTGATGTTTATTCTTTTGGAGTTCTACTGTTGGAGCTCGTAACCGGTCGTCGAGCTTTGGATGAGCTGTGTCAAAGCCTTGTACTATGGGTAATAATAACAACATTAGAACAAACTAATTTCATTAGTACCCATTAGTTCATTATATTCCTTTAAGCATTGTTAAATTGTCTTTATTATAGGCAAAGCCTCTCTTAGATAACAACAATCACGAGGAGGTCATTGATCCTGCACTCAAGGAAAGTTACGATCTCGAAGAGGTTGAGCGCATGATTTTAACTGCATCTTTATGCATCGAGCAGTCTCCTATTCTCCGACCTCGAATGAGTCAGGCAAGTGGGAAACTACACCACGGTATCCCCTCATCTCTTCAACAAACATGTAATCAAACACATTTTGGTTTATTGCAGGTTGTTGTGCTGCTAAGAGGCGACAAATACTTAGCGGAGTGTGAAAAAAGTACAAGGGTGCCACTGCAACGAACGTACTCGGAAGAGCTCTTAGATGCACAAGAATACAACAAGACGAGATACTTAAGCGATCTGAAAAAACACAGGCAGCTTGCATTTGGATCTTGAAAGTGATATTGTAACCATGCACCTCAAGGAGGAAGAAGCTATTGCAGTGTTGTAAGGGGCTTGTTTCTGGAGGTTCAATGAAATGGGGAAAAAAAAGAAAAGAAAAAGGAAGTATTTGTGGATGTAAAGTTTAGAATTAAAAAGCAAAGTGTTAATAGTTAAGTAAAATGAATATTTAACTTTGTAATCTAGTGGATCAACAGCCAAACAGTTCCTTAATTAACTCTTTGTATTTGTACTGCCATTGTTTCAACACAAATACGAAGCTGTTTGAAATGAAAGGAGAAGTTTATCTAAAAGTTTCTTTTGTTATTTCTAAATTCTTGGTATAGTAATGGCAAGGATTTGTAATGACTTGTTGTCTCTTAAAACTAAAAAAATAATATAGTCGTGTTTAT ATGCGGAGCAATATGATTTCATCTGCTTCGGCTCGAGAGTTGAGATGTTTTGACCTGGAAAGTGAGCAACGTGATGGATTGTCCCCAAGAGGAGTTTTGGAAGCAAGCTTGCAGAGTTCAGAATTCGATGCGGATTCTTTGAATGATAGTACCCCAGAACCAGAAAATCAACCTTCACAATCAGGGGCTCTTTTTCACTGGAAAAATTTCTTCAAACTATGGAAGAAAAGATCGTTCAGGCGCCTGGCCTCGTTTCCTCCTCTCGGAGTGCTGAAGATTTCAAGAAGAGGGAACAGAAGCGGGAGAGAGAATCCGGGACTAAGTGACTTGTACAAGTTCAAGTCCTCATTGGGAAACTTTACTTTCTCCGAGCTCCAAACTGCGACCAACAAATTTAGCCATGAAAATTTGATCGGAAAAGGTGGTTATGCTGAGGTATACAAGGGCCGTTTACATGATGGGCAATTGATAGCAGTGAAGAGGCTAACTAAAGGAGCCCCAGATGACAGAACTGCTTGTTTCTTGTCCGAGATTGGCATCATTGCTCATATCGATCATCCTAACACAGCCAAACTGATCGGTTGCGGCATTGATGGAGGCATGCACCTTGTTTTCAAGTTATCTCCAAATGGAAGTTTAGGATCTTTTCTCCATGGTCCAAATGCAAACAAACTTGATTGGAGTAAAAGATACAAGATTGCTCTTGGTACAGCTGATGGTCTGCTGTATCTCCACGATCATTGTCAGAGGCGTATTATTCATCGAGATATCAAGGCCGATAACATTCTGCTTACAGAAGATTTTGTACCTCAGGTAACTTGCATGTTCTAA MRSNMISSASARELRCFDLESEQRDGLSPRGVLEASLQSSEFDADSLNDSTPEPENQPSQSGALFHWKNFFKLWKKRSFRRLASFPPLGVLKISRRGNRSGRENPGLSDLYKFKSSLGNFTFSELQTATNKFSHENLIGKGGYAEVYKGRLHDGQLIAVKRLTKGAPDDRTACFLSEIGIIAHIDHPNTAKLIGCGIDGGMHLVFKLSPNGSLGSFLHGPNANKLDWSKRYKIALGTADGLLYLHDHCQRRIIHRDIKADNILLTEDFVPQVTCMF Homology
BLAST of Cucsat.G19562.T7 vs. ExPASy Swiss-Prot
Match: Q8RXC8 (Receptor-like cytosolic serine/threonine-protein kinase RBK2 OS=Arabidopsis thaliana OX=3702 GN=RBK2 PE=1 SV=1) HSP 1 Score: 314.3 bits (804), Expect = 1.4e-84 Identity = 160/283 (56.54%), Postives = 203/283 (71.73%), Query Frame = 0
BLAST of Cucsat.G19562.T7 vs. ExPASy Swiss-Prot
Match: Q8H1D6 (Receptor-like cytosolic serine/threonine-protein kinase RBK1 OS=Arabidopsis thaliana OX=3702 GN=RBK1 PE=1 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 1.4e-49 Identity = 120/283 (42.40%), Postives = 165/283 (58.30%), Query Frame = 0
BLAST of Cucsat.G19562.T7 vs. ExPASy Swiss-Prot
Match: Q5XF57 (Probable receptor-like serine/threonine-protein kinase At5g57670 OS=Arabidopsis thaliana OX=3702 GN=At5g57670 PE=2 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 6.8e-44 Identity = 84/155 (54.19%), Postives = 111/155 (71.61%), Query Frame = 0
BLAST of Cucsat.G19562.T7 vs. ExPASy Swiss-Prot
Match: C0LGH2 (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana OX=3702 GN=At1g56130 PE=2 SV=2) HSP 1 Score: 146.0 bits (367), Expect = 6.4e-34 Identity = 73/155 (47.10%), Postives = 100/155 (64.52%), Query Frame = 0
BLAST of Cucsat.G19562.T7 vs. ExPASy Swiss-Prot
Match: C0LGH3 (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2) HSP 1 Score: 146.0 bits (367), Expect = 6.4e-34 Identity = 73/155 (47.10%), Postives = 101/155 (65.16%), Query Frame = 0
BLAST of Cucsat.G19562.T7 vs. NCBI nr
Match: XP_004139200.2 (receptor-like cytosolic serine/threonine-protein kinase RBK2 isoform X2 [Cucumis sativus] >KGN60861.1 hypothetical protein Csa_023478 [Cucumis sativus]) HSP 1 Score: 552 bits (1422), Expect = 7.37e-195 Identity = 271/272 (99.63%), Postives = 272/272 (100.00%), Query Frame = 0
BLAST of Cucsat.G19562.T7 vs. NCBI nr
Match: XP_031736335.1 (receptor-like cytosolic serine/threonine-protein kinase RBK2 isoform X1 [Cucumis sativus]) HSP 1 Score: 552 bits (1422), Expect = 1.83e-194 Identity = 271/272 (99.63%), Postives = 272/272 (100.00%), Query Frame = 0
BLAST of Cucsat.G19562.T7 vs. NCBI nr
Match: XP_008455275.1 (PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK2 [Cucumis melo]) HSP 1 Score: 536 bits (1382), Expect = 8.32e-189 Identity = 263/272 (96.69%), Postives = 268/272 (98.53%), Query Frame = 0
BLAST of Cucsat.G19562.T7 vs. NCBI nr
Match: KAA0063671.1 (receptor-like cytosolic serine/threonine-protein kinase RBK2 [Cucumis melo var. makuwa] >TYK18355.1 receptor-like cytosolic serine/threonine-protein kinase RBK2 [Cucumis melo var. makuwa]) HSP 1 Score: 535 bits (1378), Expect = 8.62e-188 Identity = 262/272 (96.32%), Postives = 267/272 (98.16%), Query Frame = 0
BLAST of Cucsat.G19562.T7 vs. NCBI nr
Match: XP_038889629.1 (receptor-like cytosolic serine/threonine-protein kinase RBK2 isoform X3 [Benincasa hispida]) HSP 1 Score: 508 bits (1309), Expect = 7.64e-178 Identity = 251/272 (92.28%), Postives = 259/272 (95.22%), Query Frame = 0
BLAST of Cucsat.G19562.T7 vs. ExPASy TrEMBL
Match: A0A0A0LLJ6 (Protein kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G015850 PE=3 SV=1) HSP 1 Score: 552 bits (1422), Expect = 3.57e-195 Identity = 271/272 (99.63%), Postives = 272/272 (100.00%), Query Frame = 0
BLAST of Cucsat.G19562.T7 vs. ExPASy TrEMBL
Match: A0A1S3C0P1 (receptor-like cytosolic serine/threonine-protein kinase RBK2 OS=Cucumis melo OX=3656 GN=LOC103495474 PE=3 SV=1) HSP 1 Score: 536 bits (1382), Expect = 4.03e-189 Identity = 263/272 (96.69%), Postives = 268/272 (98.53%), Query Frame = 0
BLAST of Cucsat.G19562.T7 vs. ExPASy TrEMBL
Match: A0A5A7VD56 (Receptor-like cytosolic serine/threonine-protein kinase RBK2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00720 PE=4 SV=1) HSP 1 Score: 535 bits (1378), Expect = 4.17e-188 Identity = 262/272 (96.32%), Postives = 267/272 (98.16%), Query Frame = 0
BLAST of Cucsat.G19562.T7 vs. ExPASy TrEMBL
Match: A0A6J1DAE1 (receptor-like cytosolic serine/threonine-protein kinase RBK2 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111018855 PE=3 SV=1) HSP 1 Score: 480 bits (1235), Expect = 5.30e-167 Identity = 238/272 (87.50%), Postives = 246/272 (90.44%), Query Frame = 0
BLAST of Cucsat.G19562.T7 vs. ExPASy TrEMBL
Match: A0A6J1DBQ6 (receptor-like cytosolic serine/threonine-protein kinase RBK2 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018855 PE=3 SV=1) HSP 1 Score: 480 bits (1235), Expect = 9.78e-167 Identity = 238/272 (87.50%), Postives = 246/272 (90.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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