Cucsat.G19512.T1 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AGATTAGGGCGAAAGTAAAAGTTTTTAATTTTGAGTTGTTGCACTTACAAACAAAAACACAAAGCCCTAATCGGACCAAACCCTAGGGTTTACCCTAACTGGACTAAACCCAACTTTTCTTCCAAATCTCCCAAAAACCCATTTCCCTTTCTTCTTCTCTCTCTCACTGTCAGGCCCATCTCTCTCCTCGACCTTCCTTCTTCCTCTTCTTCTCCTTCTCCTTCTGCTCCTTCTCTCTCTATCTGCATTTCTGTTCTCCCTATTCTCTATTTCTCTTCACTTTTGAGCTCCTTTTTCCGGCAATGGAGTTGGACTGTGTAAGCTTCGTGGAGAGGACCATGTGGGTGCGCTCTGTTTTGGAAGCTATGGCGGTGGACACTGTTTTCACCACTGCAAACTCCCTTGCTTGCCTTCTGGCGGCGGTAAACCCTCATTTTCATCTTACTCTTTGATGGGGTTTCACTTTTTTCCCGGATTTTACTGATACTAGTCATCGTTCCTACTTCTTGAAGCTTAATTTTTTTTTTTTTTTTGTTATTTGTGTTTTCTTGGACTTCTTTTTTCTTATTGTTCTCCGTAGTTGTTTGTTGCCTAAGAACAAGACAACGTTATTTCTTCTCAATTTTTTTTTTTTTTTTACTTTCTTTTCTCTTCTTGTGTTCTTTAGTTGTTTATGTAGCTTTTGAAGGTTTGCCTTTTGTTATTTGTGGGTTTACCCTTGCTCGTTTGTTTACTTTTCTGGTTAAGTACTTCCTTGAGAAACAACGTGGTTTTTTTTTTTTTTAATCTGAAACTGTTGTGGAATGAGCTGTATTTGAAGTGCGAGTGTTTGGTGTAGTGATAAATGTGGATGGAAGGATAATTTTCGTCCTGTCTTGTTGACTTATACCTCCCATTGTGACCACGAACTAGGTGTCTTTGTCAGGATTTTTCCATTCTGTATTTAGATTATACTTGATATTCAATGTGCAAATCCTTTTGCTTTTCTGTCCTGCATTTGTTGAATTGTGTAAATCCTGCTTCTTTAGGGATAGTTTGTTGTTTGACATGAGAATTTGAGTTTTTTGGAAGTTATATTTATCTGATTCTTATTGATGGGGAGTTGGCACGGAATGACTTTGCTATTGTGTCCTCTGGGCTTGCTTGAATAATGTATAATATTATTCATTTCATGCGGTTTCTTTTGATTAAGTTTTAACTATCCTTTGCACTTAGTGGTTGTTGGGAGTTCATTATCACTTAGTTACAATTTCTTATCTAATCAACTCATGTTTTCTAGTTTCTTTTTGGGCATTTTCCTTTCTGGCATTTGGAATTGTTTTCACTTTGTTAGAACTTATTGTCGAATCAATTCACACTTTCCAGTTTCATGTGGGTGTTTTCCTTTTTTGCACTTCGAATCAGGGATAGTTAAAATGAATGCTGTTATTTCGGTACTCATATGTTCTTCCTGTTCTAACACCCATCAAATTGATACGTTATAGAAAGGGAGCTTGAAAACGACATAGTTTCCATATATGTTTTTTCCCCTAAATTTCAAGCCATACACTTTTTTATTTTGTCCCAAAATTTTGGAAAGTCGTTATGCCAAAGCATGGTCTGATGAGACATATCTGGAAGTTTTCTTCATTTACTGTTTTAGTCATTTAGACAATCTGTAGCTGGATGCCATGTTTTCTTTTTAATCTGATGCTTGCTTTTGAAATTTGTCATTTAGTGTGCAGTTTCCTAACCTTGTTTTGGACAATTCTGACAATAAGTAACAGTTTTAGATTAATTGAATGCACTTAACATGATCTTGAGACTTCAATTCATCTTCCACCATGATTATGTTTTCTTCAGGCAGGAGCTATGTTAAATATTGCTAATGGTACACCAGGACTGGCAGCAATTGAGGAAAGGTAATACAATTTCAAGTCATTTATATATTTTTACTTTGATACTTTTAGGTTGGTTCTGAAATACTTGCCTCTTCTCCTTTCCAAGGTTTCCTTTCTCTGAACTTCACAAAAAGGAAAGCCCTGATCAGGAAAACAAAGATGGCAGTGAAACGGAGGATGATGAAGATGACGACGACGACGATGATGCGAATGATCAGGATGACGACGACGATGATGAAGATTTCTCTGGAGGTGAAGAAGGTGATGACGGTGATCCAGAGGATGATCCTGAAGCAAATGGTGATGGAAGAGCTGGAGGTGATGAGGAAGATGACGATGACGATGATGACAATGGAGATGACGATGATGAAGATGAGGATGAGGACGAAGATGAGGACGAAGAAGACGAAGAGGAGGAAACACCCCAGCCACCAGCCAAGAAGAGGAAGTGAGAATATCGATTGGCACTTCACATTGTTGAGTTTCGAGTAGCGAGGGAAGTTTAGCTAGTGTTAGCCTTTGCTTTAGGGGTAGGAACATTGTGGGCCTTGTTGGTAATGAACTTCTCATCTTATGTTTGTGATGTTGTGGATCCATATTATATATAACAATTTCTTCTGCTGAATTAGTTAGTAGTGCTATGTTGTCAGAAGCAGAGATTTTCTTGGCTTCAAGCAAAATTCCATTGAGGAAAGAATAGCAAAATTGTGATTTGAGGCCATGGGGTTAAACAAGTTGGTTAGTTAAAATCAATGTTGTTAAACTTATGTTTATTTTTCCAAAACTAGAAAATTGATATCCTTAAATATTTAACTGATCTCGTTCAATGCGTCTAATTACGTAGGTTCAATTTGTTTGTTAGCTTTAACAG ATGGAGTTGGACTGTGTAAGCTTCGTGGAGAGGACCATGTGGGTGCGCTCTGTTTTGGAAGCTATGGCGGTGGACACTGTTTTCACCACTGCAAACTCCCTTGCTTGCCTTCTGGCGGCGGCAGGAGCTATGTTAAATATTGCTAATGGTACACCAGGACTGGCAGCAATTGAGGAAAGGTTTCCTTTCTCTGAACTTCACAAAAAGGAAAGCCCTGATCAGGAAAACAAAGATGGCAGTGAAACGGAGGATGATGAAGATGACGACGACGACGATGATGCGAATGATCAGGATGACGACGACGATGATGAAGATTTCTCTGGAGGTGAAGAAGGTGATGACGGTGATCCAGAGGATGATCCTGAAGCAAATGGTGATGGAAGAGCTGGAGGTGATGAGGAAGATGACGATGACGATGATGACAATGGAGATGACGATGATGAAGATGAGGATGAGGACGAAGATGAGGACGAAGAAGACGAAGAGGAGGAAACACCCCAGCCACCAGCCAAGAAGAGGAAGTGA MELDCVSFVERTMWVRSVLEAMAVDTVFTTANSLACLLAAAGAMLNIANGTPGLAAIEERFPFSELHKKESPDQENKDGSETEDDEDDDDDDDANDQDDDDDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEEDDDDDDDNGDDDDEDEDEDEDEDEEDEEEETPQPPAKKRK Homology
BLAST of Cucsat.G19512.T1 vs. NCBI nr
Match: XP_004139284.1 (prostatic spermine-binding protein [Cucumis sativus] >KAE8651539.1 hypothetical protein Csa_019354 [Cucumis sativus]) HSP 1 Score: 268 bits (684), Expect = 4.95e-89 Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0
BLAST of Cucsat.G19512.T1 vs. NCBI nr
Match: XP_008457268.1 (PREDICTED: phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Cucumis melo]) HSP 1 Score: 258 bits (659), Expect = 3.18e-85 Identity = 168/174 (96.55%), Postives = 171/174 (98.28%), Query Frame = 0
BLAST of Cucsat.G19512.T1 vs. NCBI nr
Match: XP_038891026.1 (prostatic spermine-binding protein-like [Benincasa hispida]) HSP 1 Score: 239 bits (609), Expect = 1.31e-77 Identity = 158/174 (90.80%), Postives = 165/174 (94.83%), Query Frame = 0
BLAST of Cucsat.G19512.T1 vs. NCBI nr
Match: XP_023545361.1 (nucleolin-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 232 bits (591), Expect = 7.17e-75 Identity = 154/174 (88.51%), Postives = 165/174 (94.83%), Query Frame = 0
BLAST of Cucsat.G19512.T1 vs. NCBI nr
Match: XP_022999304.1 (prostatic spermine-binding protein-like [Cucurbita maxima]) HSP 1 Score: 227 bits (579), Expect = 4.80e-73 Identity = 151/174 (86.78%), Postives = 165/174 (94.83%), Query Frame = 0
BLAST of Cucsat.G19512.T1 vs. ExPASy TrEMBL
Match: A0A1S3C539 (phosphopantothenoylcysteine decarboxylase subunit VHS3-like OS=Cucumis melo OX=3656 GN=LOC103496993 PE=4 SV=1) HSP 1 Score: 258 bits (659), Expect = 1.54e-85 Identity = 168/174 (96.55%), Postives = 171/174 (98.28%), Query Frame = 0
BLAST of Cucsat.G19512.T1 vs. ExPASy TrEMBL
Match: A0A6J1KGN6 (prostatic spermine-binding protein-like OS=Cucurbita maxima OX=3661 GN=LOC111493719 PE=4 SV=1) HSP 1 Score: 227 bits (579), Expect = 2.33e-73 Identity = 151/174 (86.78%), Postives = 165/174 (94.83%), Query Frame = 0
BLAST of Cucsat.G19512.T1 vs. ExPASy TrEMBL
Match: A0A6J1G306 (mitotic apparatus protein p62-like OS=Cucurbita moschata OX=3662 GN=LOC111450321 PE=4 SV=1) HSP 1 Score: 225 bits (573), Expect = 1.84e-72 Identity = 152/174 (87.36%), Postives = 164/174 (94.25%), Query Frame = 0
BLAST of Cucsat.G19512.T1 vs. ExPASy TrEMBL
Match: A0A6J1FIZ1 (prostatic spermine-binding protein-like OS=Cucurbita moschata OX=3662 GN=LOC111444342 PE=4 SV=1) HSP 1 Score: 214 bits (545), Expect = 3.69e-68 Identity = 146/176 (82.95%), Postives = 163/176 (92.61%), Query Frame = 0
BLAST of Cucsat.G19512.T1 vs. ExPASy TrEMBL
Match: A0A6J1HQJ4 (prostatic spermine-binding protein-like OS=Cucurbita maxima OX=3661 GN=LOC111465698 PE=4 SV=1) HSP 1 Score: 209 bits (531), Expect = 4.97e-66 Identity = 146/178 (82.02%), Postives = 161/178 (90.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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