Cucsat.G19477.T11 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTTTCTCTCTCCTCAATTTCTTCTTCTTCTTCTCTCTCTCTCTTAAAATCTTTAGGCAAAAGCAGAAAGGAGTTTTGGTTAAGCTCTTAGCTGTACAATACGAAGAAGCCCGTAGTTACCGATACTTAAGAAAAAGGATCTGGAAGTTCTCTCCCTCTTTCTCTCTCTCTTTCTCTCTCTCTTCGTGTTCGTTCTTTTCTTGGTTTCTTAGTTGCTGGTGGATCGATTGAGCTTTATCATCAGTTTGAAAGGCTGCTGAACAAGAAGAAGTAATCGTGTTTTTATGCTGATTTTTGTCCGTTTCGGTTTTGGTTTCAATCGTCTACTTGTCTAGGGTTCTACGGACGTTATTGATTCTGATTCTACTCCAGTTGTTCAACTTAGGTGAGGTTTTACCTTTTCAGATCCGTTGTTTTGATTCTTGGACTTCTTTAGTTGTTAAATTCATGTTTTGTTTGATTGCTGGAAAAAGAAATGTGTAATTGAAATCGATGATTGTTGACTTCTCCAATTCTGTATTTGAATTTTCTTTAGTTTACTTTTCAACTTACTTTTGTTGCAATCGATTCATTTCTTGAAATGAACACTGGATAAAACGTTGTATTCGTGTTTTATTTACTTGTTTTATGGAAGTTATAGGATATGTAGTGATTTTGGCGGGGAATTTCATTTGAGTTCGTCTGTTTGGTGTTTATTGCCGTTTGTTTTGCATAACATTGATCTTCATTGCAGTAGGTTGGGAGATATGGCGAATCGAGTGAAGGAGGACGAGAAGAACGAACGGATTATTCGCGGTCTTCTGAAATTGCAGGAGAATCGCCGGTGCATCAACTGCAACAGCCTGGTACACTATCATTACCTTTCTCATTGTCATGTTTCGCTTTGTTATATTTACTCGAACTAGTATTGGTTTAAATATTCGTTTTGTTTAAAAGAAATTCCAGTCGTTCCTTTTGACTCCTTCTTGATTTGGTTTCTTCAAATCGTAGCTCCATGAAAAGAAGTTAGGATGATCATTGCCATACTTTTGGTCATTGTTTTCACGTTAGATTTAATCAATTTCGTTGAAACACATGCAGGGACCACAGTACGTGTGCACAAATTTCTGGACGTTTGTTTGCACAACCTGTAGTGGAATACAGTAAGTGTGCATCGTTCTTGTATTTGATTCTTGTATCTCCTATTTCTCCAAAGACACGAAAACCGATGGTCATATATTTGCATTAGTCTTATGGAGTAATACTTTGGCGTATTTTGTTCACTTAATTGACAATAACTTATTTTTATTTTACTAATCAAATAGCCGCGAGTTCACGCACCGGGTAAAATCAATATCCATGGCCAAATTTACTTCTCAAGAAGTCAGCGCTCTTCAAGAAGGAGGAAATCAGGTATATGCTGGACATGGACGCTTACTTTTGTTTCTCAGAGATAAACCTTTACACTGTTAAGAATCATGATTTTCTTATATTTTACTTTTCTTTCATCTCTTTTCATGTATGAAGCGTGCAAAGGAAATTTACTTTAAAGAGTTGGATCCACAGCGTCATTCTTTTCCTGACAGCAGGTCATTTTATTTTACTTTTCTACTGTTAATGCGATGCTGTTATGTAGTTGAAATGGATGTTGTTCTGAGACAGTTTTCTTTACAGTAACGTTATGAGACTCAGAGACTTTATCAAGCATGTTTATGTGGACAGAAGATATAGTGGTGATAAAAATTTTGACAGGCCACCTAGGGTAAAATCGGTGAGATGCTCCAAATCCTTATTTGCTAATCTCTCTACAATGTATCTGAAGTTGAAGGGAGTGACCTATATTACATGATTTGTATTCTTAAATTGTGTTTTTGTCATTTTATCACAATTCTATTCAACTGAATCTTGATAGAATTCTTCTGCCATCCTATATAGGGTGAAAAAGAGGACACTTATGAAACCAGGAGAGCAGATACATATCAAGGAGGTTCTAGAAGCCCACCATATGAAGACCGTCGTTACAATGAAAGGTCCAGTCCTGGGGGAAGGAACTTCGATGAGAGAAGAAGTCCAGGATCTGATCACGAAAATCGACAGTTTGGTGATTTTAGGAAGAGTCCTGCTCGTTCTGAGGTTGTGAATGATTGGCGTAGAGAAGATAGATTTGGGAATGGAAAAAGAGTAGAAGATGGAAGATTATCTGATGGAGATTCAAAAATTGGAGGCAGGTCACCTGATCGACCAAATGATCTGGATGTATCCAGTCCCCCCATGGTACGACCTGTTAGGGATATTTTGGGAGAGAATGTATCTCCACTTCGTGTTATTGAACCACCAAAAAGTAGTGGTACGACCAAGGTTGCTGATAGCTCTGTGCATAAACAGGTGAGGTTTTTTTCTTTTTTATATTGAAATTATATTAGATATATGTTTCACATTGATATCCTTATTCAGTTACCCACCCGCTTCCTTTTTCCTATACTTTTATTTGCATGATATTTTCCGTCAAGAATTCTCGTCAATAACATTTCATCCTTCTGAGAACTGGTATCTGTCCATTTCTTTGAGCCTTTTCATTTAAAATTGATCACGTTTGGTCTGTTCTTGTTATCTCAGCAAGAGTCTCCTCTATATGACGGTGGTAAAGTATTGGACTTGGTCGTTGCATACATTAACAGGTTATGATATGATAAAATGTGGGGTATGTAAGTTTACCATGATACAAGAGTGGTCTAGAGAATTATGCTTGGTATTCAATGCCCATGGAAATAGTTTTAGTTAGCTCCTCGTGAAAAATGGATTTGTATATAGCCTCACGTAGAAGGTTTTCATTATAAAAACCTCTTATGTAGGAACAATTGATCATCATTACCAATAGCAGCATTTTGATCTGTGTCTTGTTCTGTACCTTTGTTGTTAACCAGCCGGCTTTATACATTACTTATCATTAGCTCAGTCTTGCTACTAGCGGAACTTTCAGTGTCAACTCATCAACATTAACTGTCACTCCTTTGAGTGTTGTTAATTATTGTTTTTTCCATTGAGATTACTATTGCCTTTTTCCATTGTTTCTGGATTACATCGTATTTAAACTGACACCATGTATTATTTAAATTTCAGAGAACTGCCTCTTCAAGTAGCTTAGGGTCCATCAGTGAGAATGTCGTGGAAACTAAATTGGAACCTTCTGGAAGTTTAATTGATTTTGATGCAGAACCTGAACCCATTGCTTCTGCAGTTCCGCAGCCACCACAAAGTTCTGCTCCACAACCGGTAACACACCCAGTGAATACTACAGGCGACAACAATTGGGCCTCGTTTGATGTTACGCCCCATGCGCCTCCCGCTCCTGCTAATGTTGGCACCTTAGAGTCTGTACTTTCCCAATTGTCAGTTTCAGGGTCTGTTCCTGGTGTTTCAGGATCACATGGTGCTGCTGGTGCAGTACCTAATGCACCGGTAGGCAGCATGACAATGTTACCAACTGGTTTTGATCCTTCTTTTGGATCAGGAGGGAACGCCCATATGTCTCCTCCCTTTTCTGGTGGGGCACCTTCAGCTGGACCGGGGGCTGGTTTGTCGACATTTCCTCCATCAGGTGCTTCAGCATCTGGCTCTTGATTTATAGTTGTCTAATTACTCCATATTGCTAAAAGTGCTTCTCATAATTTATGGTTCAGGGCAATGGTCCAACGTGCAGTCGCAGACACATTCTTTATTTCCTGGTGGTAATCCTCAGCCTGCGGGCCAACAATTTCCACCATCAATGGACAGAACCATCAATCATGTGGTTCGTTCGCTGTAGACTCACTTGCCTTTTTATTTTCAATGGTTTATTGTTTAAAACTAACTTTGTTCATCTTATTCTTCCTTGTGATTTTTGGTAGCCATGGAATGCTTCACATAACTCCCAAGGACCTCTAAGTAATCCAGCAGCTCATGCACCTCAAGATTTTTCAACTCCTTCACAGGCATTACCTTCTGGTGTACCACAAACTTCTGCACCTGAAGTAAAGCCTAGCGGGCGAAAAGAGTTACCAGCCGTAATTATTTTTCTCCCCTTTCTTTGGTTTCCCATTACGTAATTATCTTTGGGTTGCGTGGATCACCCTGCATTATTACAATTGACTATTTTCTAATCATCTGCAGGATCTTTTTACTTTTAATTACTCATCCTATCCTGCACCAGTTCCAGGGTGGCATACTGTTCCGCAACGCCCCGTGGTATATGCAATGCCGTATAATCCTGCAATGGTATTTTCTCTTCTTGAAACTATTAAGTGTGGGTTTTTAGTATTTTCACAATGATTTCCATGGACACTTAATATGTCTCTAAACTTTTGTTTACTTTTTACAGCCTGTGCCAAGTTTTCCACAATCTTCTACATCTACAAATCCATTTGATCTCAGTAGTGAACAACCTCAGGTATGTTGATACTAACTTTTACATTTGGCCTTTTGTATTACATAAAGTTGGTTATGTAATCTTGCCTCAACTGGTTTAGAATATTGATCCGCTCCTTGTGCACTATCTCACAATTTTAAATTATTGTAATTTAAATCCGTGCCTACTGTTTTGTTAAACTTCCACTCTTGCTTCTGTAAACTTTTTTTTCAATTATTTAGGGTTTTGTTCGTTGGTCTTTTTTTTATAAAAAAAATTAAGATTATAAATGCTACTTCCACCCCTAAGTATACTTATGTTTTCAAAAAACTTTTATGCAGTTTCCTTCCATGGGTCCATTGCAAAATACATTACCAAGTGGGCAACCTGCACCAAATTTAATACACAATCCTGGCTACGGTAATCCCACATCGACATGGATGCCACACCAGCCACCTTCTAATTTATCGCAGTTACCACCCCAGGGGCCATATCAACCTACAATGCCTTCAAGTAAAACGATCCCATCCTTTTAACATATATAAAAAATCTCACCATTTGGCACACTTGTTGACTTATACGATTCTGCTGTATGATATCTCAGGGCCACCTTACATGGGACAGCAAATAGCCAGCAACGTACAACCTTACAGGTAATTTGTGTATATTTTCCCCATAATTTATGCATTCATTGGAAGGAAACTTAATATTATCTTTGGGAGTCTAAAAATGTTAAATCATTTTGTTTTTGTTTTCTTTTTCTTTTTCTTTTTCTTTCTTTATTATCTACAATTTGAAACATGATTTTATTCTTCAAATTCAGAAATTCAAAGTGTGTTTTTGAAGCCAATAAACTCGATTATTGTTTTCAAATACAGAAAATAAACAATAAAGTAGTTATTAAATGGAACCTATATTATCCCATGGAGTCCGAACAATTTTGACATCAACTATGCGTTTTCACTCTATGTGGCATTGAAATTCATCTCAGGCATCCTGGACTTGGCAACTATGGTAACGAGGGAGCTACTGGTGTGTACACAGATATGAGCCAGCAGACAGCTGGTCGATTCTCGGCACCCTCTACTCCAAACCCCTTCTCGTCCACCGGAGGTAACCCATTTGGCTAGTGAGATAATGGAATAGCCCTGGCATTATTGTCTTGTCTTATTGCTCACCATCCCAAGTCCCAAGTCCCTCGGTGAAAAATTTTTGGTATCCATTGCAATTCTCTTCATTATATTATGTTTATCAGTGAGATAAAGAAGAGTCAAAATTATCCTATTGGCACTGTACATTTTGTTTGATGTCCGAGGGACGAAAATTCTTAAGAGAAAGAGTGAGAGTAAAAAGAATATTAGGTTAAAGTGGAGGCGTAGATTATTTGTCCTTCCTGAACTGCACCTTTTATCAATCAACTTTTTGTTATCTCTAGGAGGCTACGGTTGGTGAATTTTAGGTGTTAGTAAAGAGTTTCCATTGGGATTTTATATGATTTTCCCCTTCAAGTTGTATAATTTTTCTTTTTGTTTGTTTGTTTGTATTTTAATTTGTTTTTTCTTTCTTTTTTTGGTGTTAATTATATGATTTGTTCATTATTGTGAGTTGTGATTATATATTGTTTGGAGAAAGTTGTAGCAAACAGATCAAATTGCTGCAGGCTTTGCAGCTACGGTTTGTTTCGAAGATGTTGAAAAATCATGTATGATCTCTCTTACCTCAACTGTTGTTTTTAAATCATTTTAGGCATATTTGATTCATTCTTGTGTTCTTTTACATTAGCAAAACATTTTACTA ATGGCGAATCGAGTGAAGGAGGACGAGAAGAACGAACGGATTATTCGCGGTCTTCTGAAATTGCAGGAGAATCGCCGGTGCATCAACTGCAACAGCCTGGGACCACAGTACGTGTGCACAAATTTCTGGACGTTTGTTTGCACAACCTGTAGTGGAATACACCGCGAGTTCACGCACCGGGTAAAATCAATATCCATGGCCAAATTTACTTCTCAAGAAGTCAGCGCTCTTCAAGAAGGAGGAAATCAGCGTGCAAAGGAAATTTACTTTAAAGAGTTGGATCCACAGCGTCATTCTTTTCCTGACAGCAGTAACGTTATGAGACTCAGAGACTTTATCAAGCATGTTTATGTGGACAGAAGATATAGTGGTGATAAAAATTTTGACAGGCCACCTAGGGTAAAATCGGGTGAAAAAGAGGACACTTATGAAACCAGGAGAGCAGATACATATCAAGGAGGTTCTAGAAGCCCACCATATGAAGACCGTCGTTACAATGAAAGGTCCAGTCCTGGGGGAAGGAACTTCGATGAGAGAAGAAGTCCAGGATCTGATCACGAAAATCGACAGTTTGGTGATTTTAGGAAGAGTCCTGCTCGTTCTGAGGTTGTGAATGATTGGCGTAGAGAAGATAGATTTGGGAATGGAAAAAGAGTAGAAGATGGAAGATTATCTGATGGAGATTCAAAAATTGGAGGCAGGTCACCTGATCGACCAAATGATCTGGATGTATCCAGTCCCCCCATGGTACGACCTGTTAGGGATATTTTGGGAGAGAATGTATCTCCACTTCGTGTTATTGAACCACCAAAAAGTAGTGGTACGACCAAGGTTGCTGATAGCTCTGTGCATAAACAGAGAACTGCCTCTTCAAGTAGCTTAGGGTCCATCAGTGAGAATGTCGTGGAAACTAAATTGGAACCTTCTGGAAGTTTAATTGATTTTGATGCAGAACCTGAACCCATTGCTTCTGCAGTTCCGCAGCCACCACAAAGTTCTGCTCCACAACCGGTAACACACCCAGTGAATACTACAGGCGACAACAATTGGGCCTCGTTTGATGTTACGCCCCATGCGCCTCCCGCTCCTGCTAATGTTGGCACCTTAGAGTCTGTACTTTCCCAATTGTCAGTTTCAGGGTCTGTTCCTGGTGTTTCAGGATCACATGGTGCTGCTGGTGCAGTACCTAATGCACCGGTAGGCAGCATGACAATGTTACCAACTGGTTTTGATCCTTCTTTTGGATCAGGAGGGAACGCCCATATGTCTCCTCCCTTTTCTGGTGGGGCACCTTCAGCTGGACCGGGGGCTGGTTTGTCGACATTTCCTCCATCAGGTGCTTCAGCATCTGGCTCTTGA MANRVKEDEKNERIIRGLLKLQENRRCINCNSLGPQYVCTNFWTFVCTTCSGIHREFTHRVKSISMAKFTSQEVSALQEGGNQRAKEIYFKELDPQRHSFPDSSNVMRLRDFIKHVYVDRRYSGDKNFDRPPRVKSGEKEDTYETRRADTYQGGSRSPPYEDRRYNERSSPGGRNFDERRSPGSDHENRQFGDFRKSPARSEVVNDWRREDRFGNGKRVEDGRLSDGDSKIGGRSPDRPNDLDVSSPPMVRPVRDILGENVSPLRVIEPPKSSGTTKVADSSVHKQRTASSSSLGSISENVVETKLEPSGSLIDFDAEPEPIASAVPQPPQSSAPQPVTHPVNTTGDNNWASFDVTPHAPPAPANVGTLESVLSQLSVSGSVPGVSGSHGAAGAVPNAPVGSMTMLPTGFDPSFGSGGNAHMSPPFSGGAPSAGPGAGLSTFPPSGASASGS Homology
BLAST of Cucsat.G19477.T11 vs. ExPASy Swiss-Prot
Match: Q8RXE7 (Probable ADP-ribosylation factor GTPase-activating protein AGD14 OS=Arabidopsis thaliana OX=3702 GN=AGD14 PE=1 SV=2) HSP 1 Score: 199.1 bits (505), Expect = 1.0e-49 Identity = 147/363 (40.50%), Postives = 198/363 (54.55%), Query Frame = 0
BLAST of Cucsat.G19477.T11 vs. ExPASy Swiss-Prot
Match: Q2TA45 (Arf-GAP domain and FG repeat-containing protein 1 OS=Bos taurus OX=9913 GN=AGFG1 PE=2 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 1.8e-17 Identity = 45/119 (37.82%), Postives = 73/119 (61.34%), Query Frame = 0
BLAST of Cucsat.G19477.T11 vs. ExPASy Swiss-Prot
Match: P52594 (Arf-GAP domain and FG repeat-containing protein 1 OS=Homo sapiens OX=9606 GN=AGFG1 PE=1 SV=2) HSP 1 Score: 92.0 bits (227), Expect = 1.8e-17 Identity = 45/119 (37.82%), Postives = 73/119 (61.34%), Query Frame = 0
BLAST of Cucsat.G19477.T11 vs. ExPASy Swiss-Prot
Match: Q8K2K6 (Arf-GAP domain and FG repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Agfg1 PE=1 SV=2) HSP 1 Score: 92.0 bits (227), Expect = 1.8e-17 Identity = 45/119 (37.82%), Postives = 73/119 (61.34%), Query Frame = 0
BLAST of Cucsat.G19477.T11 vs. ExPASy Swiss-Prot
Match: Q4KLH5 (Arf-GAP domain and FG repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Agfg1 PE=1 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 1.8e-17 Identity = 45/119 (37.82%), Postives = 73/119 (61.34%), Query Frame = 0
BLAST of Cucsat.G19477.T11 vs. NCBI nr
Match: XP_011648661.1 (probable ADP-ribosylation factor GTPase-activating protein AGD14 [Cucumis sativus] >XP_011648662.1 probable ADP-ribosylation factor GTPase-activating protein AGD14 [Cucumis sativus] >KGN60631.1 hypothetical protein Csa_019224 [Cucumis sativus]) HSP 1 Score: 867 bits (2239), Expect = 1.52e-312 Identity = 446/446 (100.00%), Postives = 446/446 (100.00%), Query Frame = 0
BLAST of Cucsat.G19477.T11 vs. NCBI nr
Match: XP_008458192.1 (PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 [Cucumis melo] >XP_008458200.1 PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 [Cucumis melo]) HSP 1 Score: 847 bits (2188), Expect = 9.03e-305 Identity = 437/447 (97.76%), Postives = 441/447 (98.66%), Query Frame = 0
BLAST of Cucsat.G19477.T11 vs. NCBI nr
Match: TYK10706.1 (putative ADP-ribosylation factor GTPase-activating protein AGD14 [Cucumis melo var. makuwa]) HSP 1 Score: 846 bits (2185), Expect = 2.58e-304 Identity = 437/447 (97.76%), Postives = 441/447 (98.66%), Query Frame = 0
BLAST of Cucsat.G19477.T11 vs. NCBI nr
Match: KAA0061567.1 (putative ADP-ribosylation factor GTPase-activating protein AGD14 [Cucumis melo var. makuwa]) HSP 1 Score: 845 bits (2182), Expect = 7.38e-304 Identity = 436/447 (97.54%), Postives = 440/447 (98.43%), Query Frame = 0
BLAST of Cucsat.G19477.T11 vs. NCBI nr
Match: XP_038890018.1 (probable ADP-ribosylation factor GTPase-activating protein AGD14 isoform X2 [Benincasa hispida]) HSP 1 Score: 818 bits (2113), Expect = 2.21e-293 Identity = 420/446 (94.17%), Postives = 429/446 (96.19%), Query Frame = 0
BLAST of Cucsat.G19477.T11 vs. ExPASy TrEMBL
Match: A0A0A0LKU9 (Arf-GAP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G005280 PE=4 SV=1) HSP 1 Score: 867 bits (2239), Expect = 7.38e-313 Identity = 446/446 (100.00%), Postives = 446/446 (100.00%), Query Frame = 0
BLAST of Cucsat.G19477.T11 vs. ExPASy TrEMBL
Match: A0A1S3C7A1 (probable ADP-ribosylation factor GTPase-activating protein AGD14 OS=Cucumis melo OX=3656 GN=LOC103497698 PE=4 SV=1) HSP 1 Score: 847 bits (2188), Expect = 4.37e-305 Identity = 437/447 (97.76%), Postives = 441/447 (98.66%), Query Frame = 0
BLAST of Cucsat.G19477.T11 vs. ExPASy TrEMBL
Match: A0A5D3CJW4 (Putative ADP-ribosylation factor GTPase-activating protein AGD14 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00150 PE=4 SV=1) HSP 1 Score: 846 bits (2185), Expect = 1.25e-304 Identity = 437/447 (97.76%), Postives = 441/447 (98.66%), Query Frame = 0
BLAST of Cucsat.G19477.T11 vs. ExPASy TrEMBL
Match: A0A5A7V3W2 (Putative ADP-ribosylation factor GTPase-activating protein AGD14 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G001290 PE=4 SV=1) HSP 1 Score: 845 bits (2182), Expect = 3.57e-304 Identity = 436/447 (97.54%), Postives = 440/447 (98.43%), Query Frame = 0
BLAST of Cucsat.G19477.T11 vs. ExPASy TrEMBL
Match: A0A6J1KD34 (probable ADP-ribosylation factor GTPase-activating protein AGD14 OS=Cucurbita maxima OX=3661 GN=LOC111493811 PE=4 SV=1) HSP 1 Score: 777 bits (2007), Expect = 1.08e-277 Identity = 402/446 (90.13%), Postives = 414/446 (92.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
|