Cucsat.G18413.T7 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G18413.T7
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Actin depolymerizing factor-like protein
Location	ctg3379: 711540 .. 713810 (+)
RNA-Seq Expression	Cucsat.G18413.T7
Synteny	Cucsat.G18413.T7

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTTCTCCAGTTTCAGCCATGGTGAGACTCCTTTTTTCTCTGATTTCTCTGATTTTCACTTCATTTTGTACTCTTTTTTTGCTTTATTTTCATCGCTCTTGCTTCTAGATGTCATTTTACCACCTACCTGTTCTGGATCTGATTTATGATCTTGCTTTGATCTAGATCGTTTTGGTTTTTTTTTCTCCGATTTGCTCAGGATCAGATGTCGTTGATTTTAATTTCGATTTTTTTTTATTGATTTCAGTCTTATCGGAACTAGTTTCTGTTGATTACTGATTACCGCTGTTTATTAATTATTAGGAATTAATCGTTTGCGTTCTAGTTGGGTTGGGAGCTGGGATTTGGTGTTCTTCTGCTTGGTTCTGTGGATTTAGATGTTTTTTTTGTGATTTAGATGTTTGCGTATGTTATCAGCTATCAGGATGTTAATCTTGTGAAATGAACTGAGTGCATGTATGATTGTTGATTGCTGATAATCGGTTACTTGGTGGCGGCAGGGTCTGTGGACCGAATAAGTCCTCAACTGCCATGGTGAAATAGAGGGAAGGATTTGGAATGAAATGGATTTTTGATATTTTATCATGATGCCTACTTTGAATTTTCAATATTCTATCAAGTTTTGATAAGTTGGAAGAATTGTTTTCTTGAGAATCTAAATGTAATGCTAGTACAAAATAGGCAACTGCTCGTTTATGCCTAAAACAATGGATGTGATCTCAATGATTGTGAGAATAGACTCTAAAAAAAAACCTTGTGGAGATCATACTGATAACCAATCAGGTTCTATAAATGTCTAACTTAAAGAGGAATTGTACTAAATGTGATTTGACAGTGTGAATTCTTTAGGCATTTGATTTTGCTTACTGTTTACAGCTTTGACTTCTTTGCCCTTGAATTATATTTTCATTTTCTTCCAATTGTTTTTCTGCAGGCTAACGCGGCATCTGGTATGGCTGTTCATGATGACTGTAAGCTTAAATTCTTGGAGCTGAAGACCAAGAGAACTTACAGATACATTGTATATAAGATTGAAGAGAAGCAAAAGCAAGTCACTGTGGAAAAGCTTGGCGAGCCAGGTCAAAGCTATGAAGACTTCACGGCCTGTCTTCCTGCTGATGAATGCCGATATGCCGTTTATGATTTTGAGTTTCTGACAGAAGGGAATGTTCCCAAGAGCAGAATTTTCTTCATTGCTTGGTAATGTTATGATGGAAAATGAAACAAATTCTGTGTAACTATCTGTTTCTCACTCACTTACCATCTTTAGCTTCCATTGCTCATAATCACTATTTTCTTTTCATGTTGTAAAGGTCTCCTGACACATCAAAGGTAAGAAGCAAGATGATTTATGCAAGTTCAAAGGACAAGTTTAGAAGAGAATTGGATGGCATTCAAATTGAGCTCCAAGCTACTGACCCTTCTGAAATGGATCTCGATGTTTTTAAAAGCCGTGCCAAATGAGGCTTCCTCATTTTCAAACTTCTTGTGGTGTCTGTTTTACATTGTGAAATGATGTTATTAATTGCTGGGTTTATGGATGTGCTTTGATTACACATTGGGTTGTTTTTAAGTTTTGTCTTATAGAATTATGTCCATCTGGAACAATCTTCGGTCATTTCCCCCCTCCTTATATTGTATGATTTATCGTGTGGAATTAATGCAATATCTCCCTATGTAACGCTACATGATTTTGGTCAGGAACATTATCCTTTTATCATGCGCAATACGTCTAAGATGATGTTTGACCTTTTTGTTTTAGATTCAAGGATGCTTCTGAGTAGAATGGTTGCAATGGCTATTTTACTCTTTCTACAGAACACGGCAGCATGGGCTTTTCTAACCAGGTTGACTCGATTCTCATTTGGTAGCTCCTGTCTTCTTTAATCTTGATCTCTGTTATCAGTTACTTGAATGCTTTAGATGGGTTGTCTTGAGAAATTAGTCGAGATGTGGCTAAGTTGGCTAGAACACTCATGAGATATAAAAATAAACATTTGGGCGATTAACTATGTCCTATTCTTTTGGTACTAGAATCTGCTTGGTAGATTGTCTTTTGACTGCCCAAGTGTAATTATTTCAAGACAATGTTCTAATTATTTCAAGAAGATAGACTCTTTCAGCCTTCTTTACTTAAATCCAGATAGGCTGAGTTTATAAATATTATGTTAGGAGTTTTCAGGGCTGACCTTGAACCTAGTATTTCCTTTACAACAGGTTTAAGAAGAAAACAAGGATAGAAAATTAACACATCAAATATCTGTGTTCTA

Coding sequence (CDS)

ATGCCTAAAACAATGGATGTGATCTCAATGATTGCTAACGCGGCATCTGGTATGGCTGTTCATGATGACTGTAAGCTTAAATTCTTGGAGCTGAAGACCAAGAGAACTTACAGATACATTGTATATAAGATTGAAGAGAAGCAAAAGCAAGTCACTGTGGAAAAGCTTGGCGAGCCAGGTCAAAGCTATGAAGACTTCACGGCCTGTCTTCCTGCTGATGAATGCCGATATGCCGTTTATGATTTTGAGTTTCTGACAGAAGGGAATGTTCCCAAGAGCAGAATTTTCTTCATTGCTTGGTCTCCTGACACATCAAAGGTAAGAAGCAAGATGATTTATGCAAGTTCAAAGGACAAGTTTAGAAGAGAATTGGATGGCATTCAAATTGAGCTCCAAGCTACTGACCCTTCTGAAATGGATCTCGATGTTTTTAAAAGCCGTGCCAAATGA

Protein sequence

MPKTMDVISMIANAASGMAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVEKLGEPGQSYEDFTACLPADECRYAVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIELQATDPSEMDLDVFKSRAK

Homology

[Close]

BLAST of Cucsat.G18413.T7 vs. ExPASy Swiss-Prot
Match: Q9FVI1 (Actin-depolymerizing factor 2 OS=Petunia hybrida OX=4102 GN=ADF2 PE=2 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 2.3e-62
Identity = 115/138 (83.33%), Postives = 130/138 (94.20%), Query Frame = 0


Query: 11  IANAASGMAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVEKLGEPGQSYEDFTACL 70
           +ANAASGMAVHDDCKLKFLELK KRTYR+I+YKIEEKQK+V VEKLGEP +SYEDFTA L
Sbjct: 1   MANAASGMAVHDDCKLKFLELKAKRTYRFIIYKIEEKQKEVVVEKLGEPTESYEDFTAGL 60

Query: 71  PADECRYAVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIE 130
           PADECRYAVYDF+F+T+ N  KSRIFFIAWSPDT++VRSKMIYASSKD+F+RELDGIQ+E
Sbjct: 61  PADECRYAVYDFDFMTKENHQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVE 120

Query: 131 LQATDPSEMDLDVFKSRA 149
           LQATDP+EM LDVF+SRA
Sbjct: 121 LQATDPTEMGLDVFRSRA 138

[Close]

BLAST of Cucsat.G18413.T7 vs. ExPASy Swiss-Prot
Match: Q9ZSK4 (Actin-depolymerizing factor 3 OS=Arabidopsis thaliana OX=3702 GN=ADF3 PE=1 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 4.3e-61
Identity = 109/138 (78.99%), Postives = 130/138 (94.20%), Query Frame = 0


Query: 11  IANAASGMAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVEKLGEPGQSYEDFTACL 70
           +ANAASGMAVHDDCKLKF+ELKTKRT+R+I+YKIEE QKQV VEK+GEPGQ++ED  A L
Sbjct: 1   MANAASGMAVHDDCKLKFMELKTKRTHRFIIYKIEELQKQVIVEKIGEPGQTHEDLAASL 60

Query: 71  PADECRYAVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIE 130
           PADECRYA++DF+F++   VP+SRIFF+AWSPDT++VRSKMIYASSKD+F+RELDGIQ+E
Sbjct: 61  PADECRYAIFDFDFVSSEGVPRSRIFFVAWSPDTARVRSKMIYASSKDRFKRELDGIQVE 120

Query: 131 LQATDPSEMDLDVFKSRA 149
           LQATDP+EMDLDVFKSRA
Sbjct: 121 LQATDPTEMDLDVFKSRA 138

[Close]

BLAST of Cucsat.G18413.T7 vs. ExPASy Swiss-Prot
Match: Q39250 (Actin-depolymerizing factor 1 OS=Arabidopsis thaliana OX=3702 GN=ADF1 PE=1 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.3e-60
Identity = 110/138 (79.71%), Postives = 128/138 (92.75%), Query Frame = 0


Query: 11  IANAASGMAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVEKLGEPGQSYEDFTACL 70
           +ANAASGMAVHDDCKL+FLELK KRT+R+IVYKIEEKQKQV VEK+G+P Q+YE+F ACL
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACL 60

Query: 71  PADECRYAVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIE 130
           PADECRYA+YDF+F+T  N  KS+IFFIAW PD +KVRSKMIYASSKD+F+RELDGIQ+E
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 131 LQATDPSEMDLDVFKSRA 149
           LQATDP+EMDLDVF+SRA
Sbjct: 121 LQATDPTEMDLDVFRSRA 138

[Close]

BLAST of Cucsat.G18413.T7 vs. ExPASy Swiss-Prot
Match: Q9ZSK3 (Actin-depolymerizing factor 4 OS=Arabidopsis thaliana OX=3702 GN=ADF4 PE=1 SV=2)

HSP 1 Score: 227.3 bits (578), Expect = 1.2e-58
Identity = 109/137 (79.56%), Postives = 124/137 (90.51%), Query Frame = 0


Query: 11  IANAASGMAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVEKLGEPGQSYEDFTACL 70
           +ANAASGMAVHDDCKL+FLELK KRT+R+IVYKIEEKQKQV VEK+GEP  +YEDF A L
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 60

Query: 71  PADECRYAVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIE 130
           PADECRYA+YDF+F+T  N  KS+IFFIAW PD +KVRSKMIYASSKD+F+RELDGIQ+E
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 131 LQATDPSEMDLDVFKSR 148
           LQATDP+EMDLDV KSR
Sbjct: 121 LQATDPTEMDLDVLKSR 137

[Close]

BLAST of Cucsat.G18413.T7 vs. ExPASy Swiss-Prot
Match: Q9FVI2 (Actin-depolymerizing factor 1 OS=Petunia hybrida OX=4102 GN=ADF1 PE=2 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 5.9e-58
Identity = 108/138 (78.26%), Postives = 124/138 (89.86%), Query Frame = 0


Query: 11  IANAASGMAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVEKLGEPGQSYEDFTACL 70
           +ANAASGMAVHDDCKL+FLELK KRT+R+IVYKIEEKQKQV VEK+GEP +SYEDF A L
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKIGEPTESYEDFAASL 60

Query: 71  PADECRYAVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIE 130
           P +ECRYAVYDF+F+T  N  KSRIFFIAW PDT++VRSKMIYASSKD+F+RELDGIQ+E
Sbjct: 61  PENECRYAVYDFDFVTAENCQKSRIFFIAWCPDTARVRSKMIYASSKDRFKRELDGIQVE 120

Query: 131 LQATDPSEMDLDVFKSRA 149
           LQA DP+EM LDV +SRA
Sbjct: 121 LQACDPTEMGLDVIQSRA 138

[Close]

BLAST of Cucsat.G18413.T7 vs. NCBI nr
Match: XP_004149045.1 (actin-depolymerizing factor 2 [Cucumis sativus])

HSP 1 Score: 276 bits (707), Expect = 1.71e-93
Identity = 138/139 (99.28%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 11  IANAASGMAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVEKLGEPGQSYEDFTACL 70
           +ANAASGMAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVEKLGEPGQSYEDFTACL
Sbjct: 1   MANAASGMAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVEKLGEPGQSYEDFTACL 60

Query: 71  PADECRYAVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIE 130
           PADECRYAVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIE
Sbjct: 61  PADECRYAVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIE 120

Query: 131 LQATDPSEMDLDVFKSRAK 149
           LQATDPSEMDLDVFKSRAK
Sbjct: 121 LQATDPSEMDLDVFKSRAK 139

[Close]

BLAST of Cucsat.G18413.T7 vs. NCBI nr
Match: XP_008457551.1 (PREDICTED: actin-depolymerizing factor 2 [Cucumis melo] >ADN34239.1 actin depolymerizing factor-like protein [Cucumis melo subsp. melo] >KAA0033926.1 actin-depolymerizing factor 2 [Cucumis melo var. makuwa] >TYK02902.1 actin-depolymerizing factor 2 [Cucumis melo var. makuwa])

HSP 1 Score: 274 bits (700), Expect = 2.00e-92
Identity = 136/139 (97.84%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 11  IANAASGMAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVEKLGEPGQSYEDFTACL 70
           +ANAASGMAVHDDCKLKFLELKTKRTYR+IVYKIEEKQKQVTVEK+GEPGQSYEDFTACL
Sbjct: 1   MANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVTVEKVGEPGQSYEDFTACL 60

Query: 71  PADECRYAVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIE 130
           PADECRYAVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIE
Sbjct: 61  PADECRYAVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIE 120

Query: 131 LQATDPSEMDLDVFKSRAK 149
           LQATDPSEMDLDVFKSRAK
Sbjct: 121 LQATDPSEMDLDVFKSRAK 139

[Close]

BLAST of Cucsat.G18413.T7 vs. NCBI nr
Match: XP_038894943.1 (actin-depolymerizing factor 2-like [Benincasa hispida])

HSP 1 Score: 267 bits (683), Expect = 7.83e-90
Identity = 132/139 (94.96%), Postives = 137/139 (98.56%), Query Frame = 0


Query: 11  IANAASGMAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVEKLGEPGQSYEDFTACL 70
           +ANAASGMAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTV+K+GEPGQ YEDFTACL
Sbjct: 1   MANAASGMAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVDKVGEPGQGYEDFTACL 60

Query: 71  PADECRYAVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIE 130
           PADECRYAVYDFEF+T+ NVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIE
Sbjct: 61  PADECRYAVYDFEFMTKENVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIE 120

Query: 131 LQATDPSEMDLDVFKSRAK 149
           LQATDPSEMDLDVFKSRAK
Sbjct: 121 LQATDPSEMDLDVFKSRAK 139

[Close]

BLAST of Cucsat.G18413.T7 vs. NCBI nr
Match: KAE8653227.1 (hypothetical protein Csa_019611 [Cucumis sativus])

HSP 1 Score: 265 bits (677), Expect = 5.08e-89
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 18  MAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVEKLGEPGQSYEDFTACLPADECRY 77
           MAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVEKLGEPGQSYEDFTACLPADECRY
Sbjct: 1   MAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVEKLGEPGQSYEDFTACLPADECRY 60

Query: 78  AVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIELQATDPS 137
           AVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIELQATDPS
Sbjct: 61  AVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIELQATDPS 120

Query: 138 EMDLDVFKSRAK 149
           EMDLDVFKSRAK
Sbjct: 121 EMDLDVFKSRAK 132

[Close]

BLAST of Cucsat.G18413.T7 vs. NCBI nr
Match: XP_022964654.1 (actin-depolymerizing factor 2-like [Cucurbita moschata] >XP_022970372.1 actin-depolymerizing factor 2-like [Cucurbita maxima] >XP_023519424.1 actin-depolymerizing factor 2-like [Cucurbita pepo subsp. pepo] >KAG6583469.1 Actin-depolymerizing factor 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019224.1 Actin-depolymerizing factor 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 261 bits (666), Expect = 3.06e-87
Identity = 130/139 (93.53%), Postives = 135/139 (97.12%), Query Frame = 0


Query: 11  IANAASGMAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVEKLGEPGQSYEDFTACL 70
           +ANAASGMAVHDDCKLKFLELKTKRTYR+IVYKIEEKQKQV VEK+GEPGQSYEDFTACL
Sbjct: 1   MANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACL 60

Query: 71  PADECRYAVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIE 130
           PADECRYAVYDF+FLT+ NV KSRIFFIAWSPD SKVRSKMIYASSKDKFRRELDGIQIE
Sbjct: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIE 120

Query: 131 LQATDPSEMDLDVFKSRAK 149
           LQATDPSEMDLDVFKSRAK
Sbjct: 121 LQATDPSEMDLDVFKSRAK 139

[Close]

BLAST of Cucsat.G18413.T7 vs. ExPASy TrEMBL
Match: A0A0A0LV73 (ADF-H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G480180 PE=3 SV=1)

HSP 1 Score: 276 bits (707), Expect = 8.29e-94
Identity = 138/139 (99.28%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 11  IANAASGMAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVEKLGEPGQSYEDFTACL 70
           +ANAASGMAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVEKLGEPGQSYEDFTACL
Sbjct: 1   MANAASGMAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVEKLGEPGQSYEDFTACL 60

Query: 71  PADECRYAVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIE 130
           PADECRYAVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIE
Sbjct: 61  PADECRYAVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIE 120

Query: 131 LQATDPSEMDLDVFKSRAK 149
           LQATDPSEMDLDVFKSRAK
Sbjct: 121 LQATDPSEMDLDVFKSRAK 139

[Close]

BLAST of Cucsat.G18413.T7 vs. ExPASy TrEMBL
Match: A0A5D3BVR3 (Actin-depolymerizing factor 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold968G00480 PE=3 SV=1)

HSP 1 Score: 274 bits (700), Expect = 9.68e-93
Identity = 136/139 (97.84%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 11  IANAASGMAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVEKLGEPGQSYEDFTACL 70
           +ANAASGMAVHDDCKLKFLELKTKRTYR+IVYKIEEKQKQVTVEK+GEPGQSYEDFTACL
Sbjct: 1   MANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVTVEKVGEPGQSYEDFTACL 60

Query: 71  PADECRYAVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIE 130
           PADECRYAVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIE
Sbjct: 61  PADECRYAVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIE 120

Query: 131 LQATDPSEMDLDVFKSRAK 149
           LQATDPSEMDLDVFKSRAK
Sbjct: 121 LQATDPSEMDLDVFKSRAK 139

[Close]

BLAST of Cucsat.G18413.T7 vs. ExPASy TrEMBL
Match: E5GCP0 (Actin depolymerizing factor-like protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 274 bits (700), Expect = 9.68e-93
Identity = 136/139 (97.84%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 11  IANAASGMAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVEKLGEPGQSYEDFTACL 70
           +ANAASGMAVHDDCKLKFLELKTKRTYR+IVYKIEEKQKQVTVEK+GEPGQSYEDFTACL
Sbjct: 1   MANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVTVEKVGEPGQSYEDFTACL 60

Query: 71  PADECRYAVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIE 130
           PADECRYAVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIE
Sbjct: 61  PADECRYAVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIE 120

Query: 131 LQATDPSEMDLDVFKSRAK 149
           LQATDPSEMDLDVFKSRAK
Sbjct: 121 LQATDPSEMDLDVFKSRAK 139

[Close]

BLAST of Cucsat.G18413.T7 vs. ExPASy TrEMBL
Match: A0A1S3C732 (actin-depolymerizing factor 2 OS=Cucumis melo OX=3656 GN=LOC103497215 PE=3 SV=1)

HSP 1 Score: 274 bits (700), Expect = 9.68e-93
Identity = 136/139 (97.84%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 11  IANAASGMAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVEKLGEPGQSYEDFTACL 70
           +ANAASGMAVHDDCKLKFLELKTKRTYR+IVYKIEEKQKQVTVEK+GEPGQSYEDFTACL
Sbjct: 1   MANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVTVEKVGEPGQSYEDFTACL 60

Query: 71  PADECRYAVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIE 130
           PADECRYAVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIE
Sbjct: 61  PADECRYAVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIE 120

Query: 131 LQATDPSEMDLDVFKSRAK 149
           LQATDPSEMDLDVFKSRAK
Sbjct: 121 LQATDPSEMDLDVFKSRAK 139

[Close]

BLAST of Cucsat.G18413.T7 vs. ExPASy TrEMBL
Match: A0A6J1HYW9 (actin-depolymerizing factor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111469374 PE=3 SV=1)

HSP 1 Score: 261 bits (666), Expect = 1.48e-87
Identity = 130/139 (93.53%), Postives = 135/139 (97.12%), Query Frame = 0


Query: 11  IANAASGMAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVEKLGEPGQSYEDFTACL 70
           +ANAASGMAVHDDCKLKFLELKTKRTYR+IVYKIEEKQKQV VEK+GEPGQSYEDFTACL
Sbjct: 1   MANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACL 60

Query: 71  PADECRYAVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIE 130
           PADECRYAVYDF+FLT+ NV KSRIFFIAWSPD SKVRSKMIYASSKDKFRRELDGIQIE
Sbjct: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIE 120

Query: 131 LQATDPSEMDLDVFKSRAK 149
           LQATDPSEMDLDVFKSRAK
Sbjct: 121 LQATDPSEMDLDVFKSRAK 139

The following BLAST results are available for this feature:

BLAST of Cucsat.G18413.T7 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FVI1	2.3e-62	83.33	Actin-depolymerizing factor 2 OS=Petunia hybrida OX=4102 GN=ADF2 PE=2 SV=1	[more]
Q9ZSK4	4.3e-61	78.99	Actin-depolymerizing factor 3 OS=Arabidopsis thaliana OX=3702 GN=ADF3 PE=1 SV=1	[more]
Q39250	1.3e-60	79.71	Actin-depolymerizing factor 1 OS=Arabidopsis thaliana OX=3702 GN=ADF1 PE=1 SV=1	[more]
Q9ZSK3	1.2e-58	79.56	Actin-depolymerizing factor 4 OS=Arabidopsis thaliana OX=3702 GN=ADF4 PE=1 SV=2	[more]
Q9FVI2	5.9e-58	78.26	Actin-depolymerizing factor 1 OS=Petunia hybrida OX=4102 GN=ADF1 PE=2 SV=1	[more]

BLAST of Cucsat.G18413.T7 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149045.1	1.71e-93	99.28	actin-depolymerizing factor 2 [Cucumis sativus]	[more]
XP_008457551.1	2.00e-92	97.84	PREDICTED: actin-depolymerizing factor 2 [Cucumis melo] >ADN34239.1 actin depoly...	[more]
XP_038894943.1	7.83e-90	94.96	actin-depolymerizing factor 2-like [Benincasa hispida]	[more]
KAE8653227.1	5.08e-89	100.00	hypothetical protein Csa_019611 [Cucumis sativus]	[more]
XP_022964654.1	3.06e-87	93.53	actin-depolymerizing factor 2-like [Cucurbita moschata] >XP_022970372.1 actin-de...	[more]

BLAST of Cucsat.G18413.T7 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LV73	8.29e-94	99.28	ADF-H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G480180 PE=3 ...	[more]
A0A5D3BVR3	9.68e-93	97.84	Actin-depolymerizing factor 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
E5GCP0	9.68e-93	97.84	Actin depolymerizing factor-like protein OS=Cucumis melo subsp. melo OX=412675 P...	[more]
A0A1S3C732	9.68e-93	97.84	actin-depolymerizing factor 2 OS=Cucumis melo OX=3656 GN=LOC103497215 PE=3 SV=1	[more]
A0A6J1HYW9	1.48e-87	93.53	actin-depolymerizing factor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111469374 P...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002108	Actin-depolymerising factor homology domain	SMART	SM00102	adf_2	coord: 22..149 e-value: 4.4E-58 score: 208.9
IPR002108	Actin-depolymerising factor homology domain	PFAM	PF00241	Cofilin_ADF	coord: 24..146 e-value: 2.5E-37 score: 127.4
IPR002108	Actin-depolymerising factor homology domain	PROSITE	PS51263	ADF_H	coord: 15..149 score: 37.74263
IPR029006	ADF-H/Gelsolin-like domain superfamily	GENE3D	3.40.20.10	Severin	coord: 7..149 e-value: 5.2E-52 score: 177.8
None	No IPR available	PANTHER	PTHR11913:SF74	ACTIN-DEPOLYMERIZING FACTOR 2-LIKE	coord: 10..148
None	No IPR available	SUPERFAMILY	55753	Actin depolymerizing proteins	coord: 12..147
IPR017904	ADF/Cofilin	PANTHER	PTHR11913	COFILIN-RELATED	coord: 10..148
IPR017904	ADF/Cofilin	CDD	cd11286	ADF_cofilin_like	coord: 16..148 e-value: 2.72121E-65 score: 193.157

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G18413	Cucsat.G18413	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G18413.T7.E1	Cucsat.G18413.T7.E1	exon
Cucsat.G18413.T7.E2	Cucsat.G18413.T7.E2	exon
Cucsat.G18413.T7.E3	Cucsat.G18413.T7.E3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G18413.T7.C1	Cucsat.G18413.T7.C1	CDS
Cucsat.G18413.T7.C2	Cucsat.G18413.T7.C2	CDS
Cucsat.G18413.T7.C3	Cucsat.G18413.T7.C3	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G18413.T7	Cucsat.G18413.T7-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030042	actin filament depolymerization
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003779	actin binding
molecular_function	GO:0051015	actin filament binding