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Cucsat.G16801.T9 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ACATTTGGCAATGGACAAACCGCACCACAACAAAATGCAATGCCTTATGTCGATTTTCCATTTTTCATCTGTAAAACTGATCATTTTTATTGAAGGTGCTAGCTTCTCAAAAGCGCTTGGAAAACAAGTATAAATCTGCACAGCAAGCTGCTGATGATTGGTAAATCTTTATAACCATTTTCCATTTTCTTTGTAGAGTGTTCCCAATAGGAGATCTTTCATTGTAATACACCTTTTGGTGGTTGGAAGTCTGTTAATTCTATTTATTTCATTCATCAATAAAATTGTTTCTTTTCCAAATCTTAGTAGATTGATAGGCATACACCTTTTGTTTTAAATTTTTATATAGGTACCGCAAGGCACAATTAGCTCTACAAAAAGGAGATGATGATCTTGCTCGGGAAGCTTTAAAGAGGCGCAAATCATATGCTGTAAGTTAGAACAGAATGAATTCTGTGACAAGTTTGATTTGTATATTTCATGATGAACATTTGTTTTTGAAATTTTGCCAAAGTAAAGTTATTTTCACTTGAAGAGTTCATTCAAAATGATATTTACAGTTAATTTTTTCATCTTCTAGCACATCTTTAACATGCTTGACCTATGTTGTGCTTTGGATTGTAGCACGTAGGTCCTATGAGGGTTTGGCCATACCATGAAAAATAACCTATGCGTATAATTTTCTCGTCTTTTAAACTTACCTCAAAAGGTGGTCACACTATCATAAATTGATAGATTTGATGTCTACACTTTTTTTTATAAGAAATATCTTTCATCGATGTATGAACGTACGTAGGGGGCAGAAGCCCAAGACCGAAGGAGTTACAATAGATTTCTCCAATTGGTTATAAGAGAAGTAAGATCAAATGCATTGAAAAGAGAAGTACATTTACTTCAAGTCATGGCTAGGTAGGTAGCAAGTTCCCATATTGTGTCGTATGACCTTTCTTTTTCTTTGAAAATACTATTGCTTCTTTCTTTCCAAATTGTCCAATTTGATGTCTCTATACTGGAAATGTATTTCTTTTTTCTATTGACCAATCTTTTAGATGTTCGCTCGTTTCCTTCTCAAAAAAAATCTTTTAGGTGTACGAGTTTATGCTTCACACTCCTCACTCCTCACTCCTCACTCCTCACAGCCCTCTGTTAATCTTTCTTGAGGAATGCAGCTGAATGCCAATGGTACTGCAGTAGAGGTATTTAAAATGTGGGTGGGGAGTTCTAGAGGAAGTTGTAATCCAATTCATGAGAATACTTTCTAGTCTCTAGTCACCATGCCCATAGTTATATTATTTATTACTGGCCAAGAACCTCCTGATTTCCTTTCCAATGGGCAGTTCTTCCTCTTTATTTTTTAGTTTCATTTGGCCCCTTGTAACTGCGAGTTCGTGTTAACCTCCCGTCTCCCTGCTATCAGTGGAGTCGTTATTTTCCTTGAGCACAGGGATCGTTTGTGTTTTTGGTTCATTGATCCTTTCTAATGGGTAGTTATTCCTCTTTATTTTTAGTTTCATTTTGCCTCTTGTAACCCTGAGTTCATTTTAACCTCTCTTCTCCCTGCTATTAATGAAGTCATTATTGTCCTTGAGCTTAGGGATTGTCTGTGTTTGGTTCATTGATCCTTTCTGGTGCCTTGCCTTCACTTGTAATTTATTGCACAAAAGCATTTGGTTTCTGCACAATTCTCGAATGCTCCCTTTTCTTCTCTAAGCTCTGGGAGCTAAACATCTTGAAGAATTAGAAACAGATCCATATTACTTTCGTAGTTTATCTTATAGAAAATAGAGATATCTTAACGTTCATTATGTTTCTCATAAAAAAGTAAATAAATAAAATTGTTAAGATATCTCTATGGAAGATTTGAATCCTCTCTTTCTATTTATGTGATGTTATATTCTAAAGTTAAACGAGAATTTATGAATGAATATTGGGTTTTTCATTAAAAAAAATCTATTTTCAATAAGTTATTTTCCAAATTGAAAAATCTTTTTTGATTTTTGTGCGACATGGAACTATTTTCATGTTATTTTCTCTCCTAGAGGTATGTTATTAGAAACTTTTTTGAACTTGAAAGTTAATTATGCATGGAAAGATTAATGATTTATTGTGCTTGATGATCACTTTGTTCTACTGGCAGGATAATGCAAATGCTTTGAAAGCTCAACTTGATCAACAAAAGGGCGTTGTGGAAAATCTTGTTTCTAATACACGGGTATGAAGTTCTATTGTGTTTTAAAATTATATACTATTAAAAAAGAATATAGCCAAGATTCTCCTGTATTTCTCTTGTAGGCAGTGTGAACATATGTCTAAGTCGTCAGTGTGAACCAATGATGAGATCCATTTTTGTTTTAATTGATGTCGTCAATAAATATTGAGAAAATTTAGTGTTCTTCTTTTTGTTGAGATAACGCAGATCCCTAGTACTTTCGTAGTATATCTTTATAGGTTGCAAATATTGTTAGAATTATAAACGGGTAGAAACAAGTTGTCATGTAATACATGTTTGAATATTAGTATGATTCTTTGACTTTAAGCTTCTTAAACAAGGATAATTAGCCCATATCATACTTTTTTACCATGGGAACTTTTCTTTGTAGCTTTTAGAGAGCAAAATACAAGAGGCGAGGTCAAAGAAAGACACACTGAAAGCGCGTGCTCAGTCTGCAAAGTTTGTGCTTTAATTGTAGATTGTTAAAATACTTTTTTCATGCGTCTCTTCACATATGGATGCTCATAGCACCTTTCCTTGGCTTTAGGACCGCAACCAAAGTGAGCGAAATGTTGGGGAATGTTAACACAAGTAGTGCTCTCTCTGCTTTTGAGAAGATGGAAGAGAAAGGTAAGGAAACAAAATTTTGAAGTCAAACTTAGGTTTGGCACACCTGAAGCCAAGTCAATTTTTGTTTAGATTTTACCTTTCTTTTGATCAAATCATTGATTTATTTACATGGAGATGAAGTTTGTTTTGTGGAAGCTAAAAGTTATATTCTTTACTGATATTTGGTTCTTTTCATTTTCTAACTTCTCCATCAAAATATAAGATACAAAATTCTTTTGCAGAATTTTCTATCAAGTCTTATGTTTAGATTTGAATGCGACTTTTCCTGCTTAATTTTGTTGTAGTGTTCTAGCTGTGCTTGTTTTGTTTAAATTTTAAGTTTTGTTGTATTTTGAGCCTCAGTGTCTTTTTATTATTTCAATGAAAATTTTAATCTCCTTTTTTTTCACAATATAAGATATGAAAGTCTATCATCTTTCCTTCACGCCTTGTCTTCTCCATCATCAACATCCCCACTACTTTCACCTTAGCCAGTAGCCACTGCCTTTTCCTCTCTATTCATTCCATGTTAGCCTTCAAATTTCACTTTATGAGTCCCTTTGTTGGAAAAATCGGAAATTCAAAATCCTAGTTGGATTGCAATTTCATTAACCACATGTTATTCTAATTTTTTAAACTTTTTAGAACTGCCCTTATGATAAAATATTTACACCAATAACTCTATCTCCACTTTATTTTGTACATGTGAATCCATGACATCTAACTTCACTACAATGTTCATTGTGATATTAGCTCTTTGTTTGGCTGGGTGGCCAAGTACAAGCAGGTTCCCATCCTTTACTTGATTCCAAGCTCCATTCACACGAACATTTCAGTCTATTTCTTTTACGTATCTGGATCGCTGATGTGGTGGTTATTGCTCACTACTGAGTCAAATCTTTGCTTCAGTTTTCTTATCACTGCTTGTTCTTTCTAACAGAAGATTTTTTAAACTAATATTACTTTATTTAGACAAGTTTTCTTACCAAGATTCTTGTGTATATGTTATGGATTTGCGATGGCACTGCTTTCATATTTTGCTTACGTTCCTCAAAATCTTTGTAGTTTTGGCAATGGAGTCTCAAGCAGAAGCTCTTGGACAGTTAACAACTGATGATCTTGAAGGAAAGGTAACAGTTTTATTTTTCCTCCAAATCTATTTTGTGCTTGATTTTTTTGCTGGTTTATTGAGCTTAAAAACAGAAAATACAGGTGTCATTTCTCTTAAGATTTGGTTCCTTCCCAAACTTTAGTTACTTCTTTAGTTAAGTTCCTCTCTAGAGGTTGGAGGTTCGATCCCCATCTCCCGTTGTACTAAAAAGAATTTACTTCTTTGGTTAAGTATATTGTAAAAAATTACTCCAAAATAACATCTTTGCTCCCGTAAACCAACTAAATGATTTCTCATTTCTCTCTCTTTCTTATTAAAGAAATGATTTGTTTATTTGTTCTTTCTGGTATAGCATATTTTGAATGCTGGTTAATTATGGAAATAGTTTGATCTTCTGAAGTGTGAAAAAAATATCTCTTTCCCTAGAAACATGTTTCTTAAGATTAAAAAAAAGTTCACCTGGTTCTTTGGTAGAATGTAAACTTCAATTATGGAAATTGGTTTCTGGATTTTGCGCTCCAAGGCATTAGAACAATACTATCTGACTTGTGATTGAATGGTGGTTAGGCTTAATGTGCAGTGGTTTGCTAGGTTAGTATTTGGACCTCACATCTAAAGATATATTAGAGTTAATCAAGCTGAACAGCTAGCCCCTCTTCTCTCCAGATTTTAAAGAACCATTACCTTTTAAGTTCACACGTTTGGAATGAAGTGCAAGGTTTATTCTGTGCATTTGTCTGCTGGTTATAGAGATCAACAGTGGTCTCTTGAGTTATTGTTTGAATCCCTTTCTGGTAAGTCTTTGTTTGTTCATTAAATTTCCCCAACACCCTTTTTTTTCTTGTTCTTTCGTCTCTTCCTTCTTTGAAATTTAAAATTGCGAAGAAAGTTTGGTTCTGGTTGGTCACCTTGGGAAGGATCAACACATTTGGAGAGCTTTTTTCTCATCCATAAGAGAATTGATGGAAGATCGGGAGGAAAGTATAAATCGGTTGTTGGTCCTAGTTGGCAGAAATGCTTTTGTAGATGTATCTGAGGACTTCAATCATATCTAGTGGCCATCCCCCTTTTCCACCAGAAGTTGTAGTCGTTCTTGCAGGTTTCAGTCTACCCTATGTGTAGAATTGAGGGGGTCTTTGGGTTAACCTAAGACTACAAATACTATTTTGTAGTCCCCAATTGGCTACATAACACTATTTTAAAACCCCAATTTGCTACATTATTTACTATTTACTACTGTTTTTACTATTTTACATTCATCAATTTTTATATTCTTTGCTGCAGCTTTAACTATTTCCTTCTCAAACTAAAACAGTTTATAGTTCAAACCCATACTATTGTAACCCAAATTAAAATAATCTGCACCCCTATCACAAACTATTATAATCTAACTTTAATAACCTAGGACTATAATAATCAACTTCTTGTCCCAAAGCCCCTTGAGTATACATGAGATGAGACGCTGAACGAAGCTGTTTTAGACCCCTTTTCTAAGGGAAGGAGAAAGTTTTTGTGAGGCCGATTTCCTTGCTATTTTCTTCCTTAGAAAGGAATAGGATAGTGTTCCTTAGAAAGGATCGTTCTGGGGAGGACTGATGTATGCAATTCTATCAATGATCTCTTGCTCAGATTAATTTTATTTTGCAACGTTATTTTCTTGACAAAAAACTGGGATCATTTTTGGAAATGTTTCAATGTACGATTTTGTAGATGTTTTGAGGTATGCTTCCCTGTGTTTGGTTGGGCCTATCTTTTTGGCCTTTCTTTGTGTTTTTTCTTTTATTGGATTTTTCCACTCTTTTCTCTTTTGATAATAACAAATAGCATCTCTTGCTGGAATTCGGTGTGTATTGATAACTGTTGTAATATTGACTGTATCTGTGACAGGTTTCATTTGGCTGCATTTTTATCTTATCTATTTGATGTTAACTGAGATATATCAATTATTATTCTTCCTGCGCTTCCTTTCGTAAGTGAAGATAGGATTTTCTCTAGAATTCACAATTAAAAGTTATACTGTATGGTTTAACATTTTACATCAAGTTCCAAAAAAAGAACATGCTACATCTTTCAAGATTTTGCTTTCTTAACCTATATTTCATCATTTGATGTCTATTTTAAAATAGATCCTATTTTATTTTGGCTCTGACCTATTTTCAATGTTGTAGTTTGCTCTGTTGGAAGGCTCATCCGTTGATGATGAGCTAGCAAACTTGAAGAAAGAGTTATCTGGAAGCTCAAAGGTAAATCATAGGTTAAAATCATGTTTTTTTTGTTTTTTTAATGATCTTATTCTTTGTTATGCACTTTACACTTGACAGTGGGAACTGCTATGAATTTATGATGCTAGGTTTGACATATTCTATTCTTCATGATCTATTTTGTAATATCCAATGGTGGCTTCAGATAGATGAAACTTCCTATTATTAAGTTGCATCATCGGCTAAGTTCACCAAATGAAATGGTAGTGTTGGCTTGTTGGCTCCTTGGCTCCTACACCCATGTAATTGATAGTAATTAATATTTCATACGTAGTCTAGGAGGGAGGTGAACTAAAGAGAGTTCTCGTTCCTTAAACATTGCTTAAAAAGAACCCTTTCCGATGGTTTAAGAGTTACAGAGTTCTGTTTTTCTTTTTCGATAAGAAATGAATACCGAATAGACGTAAAATATCCACTACTATAGCCTCCCAGTTTCATGAGGTCTAGCTCTCGAATCTCCCATTGCTTGATTTATACTCTATTTATAGTCAACATGTGTGAATTTCAGAGCTCCTCGATCTGCACGTTCATACTCTTTTTGCTGTTTCAATCTTTGAGTGATGGATCTTTTGATTCAAATATTTTAACGTTCCCTGCTATTTTTTTAATTTTCCAAACATCTAGAACTTGAGGATGAAAAAGATTCAGTATCCTCTTTGTTGGCATCCTCGGACAACATTCTTCTAGTATTTGAATCTAAAAATGGGATCCTCTCTCTCTCTACAGAAAGGAGAACTTCCACCAGGAAGAACAGTTTCTGGCAGCGCATTTCCAGTTCGTGATGCTGAGATCGAGTCAGAACTCAATGAACTGAGGCAAAGAGCAAGAGAATTGTAGGGGTATGCCTAATCATTAGAATCTTTAATGTCCAAAATTTCAATTTGAGCAACTGACATCATTCCATATTAGAATTACATTGTACAGGAAGAAAAGTATCCAAACAGATCAACAATTGTATAGCTAAACACCAACTTGAAAGAGAGTAATTTTTGGAGTGAGAGTGCAATAACTTGTATTGCAAAATCTGTTTAGGTCATATATATTGATGAATCTGTGAGGATCAAATGTTGTTTGTAAGTTAAAATACACAACTTTTGGAACATAGATCATTTTTTTTGGGCTATCTATTTGCTGTTTTCCCCACCAACTTTCTGTAATTTGCAGAAAAACTGATTGGGATCTTTTGCATCATATATAATTAAAATTTGTGTTTAAGGACTCTTTTCCTCTTCT ATGTTGGGGAATGTTAACACAAGTAGTGCTCTCTCTGCTTTTGAGAAGATGGAAGAGAAAGTTTTGGCAATGGAGTCTCAAGCAGAAGCTCTTGGACAGTTAACAACTGATGATCTTGAAGGAAAGTTTGCTCTGTTGGAAGGCTCATCCGTTGATGATGAGCTAGCAAACTTGAAGAAAGAGTTATCTGGAAGCTCAAAGAAAGGAGAACTTCCACCAGGAAGAACAGTTTCTGGCAGCGCATTTCCAGTTCGTGATGCTGAGATCGAGTCAGAACTCAATGAACTGAGGCAAAGAGCAAGAGAATTGTAG MLGNVNTSSALSAFEKMEEKVLAMESQAEALGQLTTDDLEGKFALLEGSSVDDELANLKKELSGSSKKGELPPGRTVSGSAFPVRDAEIESELNELRQRAREL Homology
BLAST of Cucsat.G16801.T9 vs. ExPASy Swiss-Prot
Match: Q8S0J7 (Probable membrane-associated 30 kDa protein, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0895100 PE=1 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 1.1e-36 Identity = 84/105 (80.00%), Postives = 92/105 (87.62%), Query Frame = 0
BLAST of Cucsat.G16801.T9 vs. ExPASy Swiss-Prot
Match: Q03943 (Membrane-associated 30 kDa protein, chloroplastic OS=Pisum sativum OX=3888 GN=IM30 PE=2 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 9.7e-36 Identity = 83/109 (76.15%), Postives = 94/109 (86.24%), Query Frame = 0
BLAST of Cucsat.G16801.T9 vs. ExPASy Swiss-Prot
Match: O80796 (Membrane-associated protein VIPP1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VIPP1 PE=1 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 6.5e-32 Identity = 75/104 (72.12%), Postives = 92/104 (88.46%), Query Frame = 0
BLAST of Cucsat.G16801.T9 vs. ExPASy Swiss-Prot
Match: Q55707 (Protein sll0617 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=sll0617 PE=1 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.1e-10 Identity = 47/112 (41.96%), Postives = 65/112 (58.04%), Query Frame = 0
BLAST of Cucsat.G16801.T9 vs. NCBI nr
Match: XP_008454073.1 (PREDICTED: membrane-associated 30 kDa protein, chloroplastic [Cucumis melo]) HSP 1 Score: 195 bits (496), Expect = 1.40e-59 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0
BLAST of Cucsat.G16801.T9 vs. NCBI nr
Match: XP_004152136.1 (membrane-associated 30 kDa protein, chloroplastic [Cucumis sativus] >XP_011653030.1 membrane-associated 30 kDa protein, chloroplastic [Cucumis sativus] >KGN53007.1 hypothetical protein Csa_015406 [Cucumis sativus]) HSP 1 Score: 195 bits (496), Expect = 1.40e-59 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0
BLAST of Cucsat.G16801.T9 vs. NCBI nr
Match: XP_038882220.1 (probable membrane-associated 30 kDa protein, chloroplastic [Benincasa hispida] >XP_038882224.1 probable membrane-associated 30 kDa protein, chloroplastic [Benincasa hispida]) HSP 1 Score: 192 bits (488), Expect = 2.25e-58 Identity = 101/103 (98.06%), Postives = 102/103 (99.03%), Query Frame = 0
BLAST of Cucsat.G16801.T9 vs. NCBI nr
Match: XP_022955518.1 (membrane-associated 30 kDa protein, chloroplastic [Cucurbita moschata] >XP_022955519.1 membrane-associated 30 kDa protein, chloroplastic [Cucurbita moschata]) HSP 1 Score: 191 bits (486), Expect = 4.50e-58 Identity = 100/103 (97.09%), Postives = 102/103 (99.03%), Query Frame = 0
BLAST of Cucsat.G16801.T9 vs. NCBI nr
Match: XP_023528686.1 (membrane-associated 30 kDa protein, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 191 bits (486), Expect = 4.50e-58 Identity = 100/103 (97.09%), Postives = 102/103 (99.03%), Query Frame = 0
BLAST of Cucsat.G16801.T9 vs. ExPASy TrEMBL
Match: A0A0A0KXA3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G011060 PE=3 SV=1) HSP 1 Score: 195 bits (496), Expect = 6.77e-60 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0
BLAST of Cucsat.G16801.T9 vs. ExPASy TrEMBL
Match: A0A1S3BX93 (membrane-associated 30 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103494597 PE=3 SV=1) HSP 1 Score: 195 bits (496), Expect = 6.77e-60 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0
BLAST of Cucsat.G16801.T9 vs. ExPASy TrEMBL
Match: A0A6J1GWI0 (membrane-associated 30 kDa protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111457520 PE=3 SV=1) HSP 1 Score: 191 bits (486), Expect = 2.18e-58 Identity = 100/103 (97.09%), Postives = 102/103 (99.03%), Query Frame = 0
BLAST of Cucsat.G16801.T9 vs. ExPASy TrEMBL
Match: A0A6J1INR4 (membrane-associated 30 kDa protein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111479163 PE=3 SV=1) HSP 1 Score: 191 bits (484), Expect = 4.36e-58 Identity = 99/103 (96.12%), Postives = 102/103 (99.03%), Query Frame = 0
BLAST of Cucsat.G16801.T9 vs. ExPASy TrEMBL
Match: A0A6J1CXL6 (membrane-associated 30 kDa protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111015204 PE=3 SV=1) HSP 1 Score: 191 bits (484), Expect = 4.61e-58 Identity = 99/103 (96.12%), Postives = 102/103 (99.03%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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