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Cucsat.G16794.T7 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AATAATAAAAATGGTACAGTGCTAAGATTTCATATGTTAACGATAACCTAATAAAAGAAATTTGTTTGGGGTTTTACCGGTCTTTCTTCTTCACCTTCTCCGGCATCGGAAGGAGCGTACTCTATCTGAAGTCGGCCCTAATTTCATCATCACACTCAACCTCCATTCAATCTTCCTTCTTCTGTTACTTGTACCAATTTCATTGATCTTCAATCAATTCGTCTCCGACTCCCATGGCCACCTCTCAACATCCACCACCTTTACAGATTCTTGGTAAGTTTTCTTCTAGCTCATTCATTTTTCTTTCTCTTTCAATTTTCTCATCCTTAAACTTCCTCCCAGTTCGAGGATCAGATGGTTTTTCAATTTGGAATGGACCCCCATTCATCGACAACCAACCCACCATCAACAAACTCGACAAGGTTGCTTGCACCAGTACGAAATTCAGTGAAGATGGATCCAAATTGCTGGTTACGAAGTCTGAAACTTTGACCATTTACGAATGCCGTGGTTTTGGAGAGATCAAGTCTTTTGAAGTACCCAATTTGCTTGCGGCTGCTTTGTCACCATGTGGGACTTATCTCCAGACATTTCAGAAATCTTCAACTCCTCAAGAAAAGAATGTTGTTCTCTGGAAGGTTGACACTGGTGGTCTTGTGTACTCTCAATTTCAGAAGAATATGACCAAAGTGTCATGGTGAGCGGTGTCTTGTATTTATGACGATTTATAGGCTTGGTCTTTTTCGTTTGTAGCTTATTATGTACTAGAGAAATTGGTTTTATATAACGTTTAGATTCCTTAGTGGGTCATTGAACCTTTGTGTTTTTTAAGATATTTATAAACTTCAAACACACTTCATCCTCCAGGCCTGCAATTCGATTCAGCTCTGATGAAACTGTTGCCTGTCGGATGGCTACTAATGAGATACAGTTTTTTGATGCTAAAGATTTCTCTAAGGGAGTTATTCATCGGCTTAGAGTTCCAGGAGTCACTGCAATTGAACTCTCAAGGACACCTGGAACCCACATTGCAGCCTTTGTTCCCGAGTCCAAGGTTGGTCTGTTAGACGAGGTTTGCTCATGGAGATTCATAAACTCCACCATTTTAGTGGTTTGTTGTTTTGTATTTATGCAGGGGGTTCCTGCCAGTGTCCAAATCTTTGCTTGTGGAGATTCACAAACTCAACCGATTGCTCGACGAAGTTTTTTCCGTTGTTCAACGGTACAACTAAACTGGAACAATGGTTCTACTGGGCTTCTAATTGTTGTGCAAGCAGATGTAGATAAAACCAACCAGAGTTATTATGGTGAAACAAAGTTAAACTACTTGACAACCGATGGTGTTCATGAAGGACTTGTACCACTTCGTAAGCACTAAATTCCTTTTCTTCAAATATTTGTTGCAGTACGTTCCAACACCCTAGCCAGCTATTATTGACATTAAAGTTTCCAGAGAGAAAGAACTGATTGTTAAGGACCTTGGCAGGTAAAGAAGGGCCCGTCCATGATGTGCAGTGGTCACAGAGTGGTTCAGAGTTTGCAGTAGTATATGGGTGTATCCTTATTATTGTACCATATTGCGGAAGGTTTATCTTATCTTTCACAATTAGATTGCACATTCAAATTTAACAATCTGTATTAATAAAGAGGATAAGCATATAGTACATGATGATGGTGTACATTATAGACTAGGAGATCATTTGCCAATAGCTCCCGGCATACTATGGCCAGACTTCTTCGATTGTAGCTCCATGCTTACTATGATTAAACATTTTCACGTGCTTTACATTGTTTTTTAAGTGGAATGGCTAAATATAATGTGAAACTAATCCAACCAAATGCTAGATTAATGAATTTGGTTGTTTTCATATTCCGTTACTATATAATATATACGTTACATGAATGTACTGGATGTGTACTCTGCTTGATGGTTCCTTCAACACTATAAATCTATGCATAACTCCTTTTAAATCCAATTATGGGTTTGTAAAGATCTTCAACATTTTTCCAAGAGCAAAAGAATATGTACAAAGAAAAGTTAATGTTCGGTAGAACATCTTGTTGACTGTTGTACCTTGGGATAATTCAATAATTAATAATTTTTAGAGGCATATACTCTCTCTTGAGCTCGGATGTTTAAATCTCCACCTCAATAATGCTGTACTCCAGCAATTATGATAAATGACATCTAAATGTCCTTATTCTTGTACTTTGCTTCTGCTAGCTGTGTTTTCTCTTTGCCTTGCACTTGTTCCTTGACAAAAAAAAAGTTATGCCTGCAAGAGCAACGGTGTTTGACAAGAAGTGCAAGCCTCTTCTTGAGCTTGGAGAAGGTCCCTACAACACTGTACGATGGAACCCGAAGGGGAAATGTATGTTTTCTGCTTTCATCTTTGGGATATCTACCTATGCTTTCTCTTCTCCATTTTCTTTAGCTTTTTCCCCATCTTGTTTTTCTTTTCTCTTCTTTTCTTTTCTTTTCTTCTCCTCTTTTCTTTCTTTCAAGGGAGGAACTACTATGGTGTCATTAGTGTTATTTTGTGACCTTAATTCTCTGGCCTGCAGTTCTATGTTTGGCTGGCTTCGGTAATCTGCCTGGTGACATGGTATTCTCTCTGTTTCATATATTTATTATGTGTCGTGTTCTCTGTTTTGCATAAAATATGGGCAGAAGTTTCTTGTTATTGTTTATGGCATGTTTCTCTTCAGAGTACTAACTTGATAAATTTCAAGAACTTTCCAAATTCGTTAAACATTGTACATCTGTATAAGCAATGGTCCAACCCCTATTATATTGATTATCACCGGTCAAGACTTGCGCTCATTATAGTATTATGCTCTTGCCTTTTCTTGTCTTCCCATGATTGAAGGAATGATATTCATATTTTATTTTCACATTTACAATTTCTTCTGCTTGCAATCATCTTTAACAGGCATTTTGGGACTACAAGGAGAAAAAACAACTTGGAAGAACAAAAGCTGAATGCTCCGTTACTAGCGAATGGTCCCCAGATGGGCAGTTTTTCATGACTGCCACAACGGCTCCAAGACTTCAAGTTGACAATGGGTAAACACTTTTGTACTATGTACAAAGATGGTGCTTGTAACCTAAATAATGTGAAAAGAGACTAAAAACTAATGTTGCTCAAGGCTTAAGGCCTAAGGGGGTATCAAGTTGTGTTATGTACTTTAAGCACGTTCATTTTTTCTGATGCATTCAAATTTCCACCTGTATAATATTCTTGGTTTCCCAATCGGCGGACAGGAGGATTTTGGTCAGCTATAAATAAGTTGATATCATTGTTTTCCTTGTATAGGATAAAAATTTTCCATTACAATGGAGCTTTATACTTCAAGAAAATGTTTGACAAGTTGTTCCAGGTAAGAGCTGTTCACCTTTCATTTTAAAAGATGTTTAACATGACTACTTCTCGCTCTTTTCCTCATGCAAACATTTTGTGCAGGCCGATTGGAAGCCAGAGTCTTCAGATAAGTTTGGTGAAATCGATCTACTAGTTAAGTCTGTAGAATCGCTAAATGTTGATCAAAAGAAAACACAAGGTTCCATCACATAACTGTTATCTTATGTCTATATGCTTCTGTATTTATCCAGTTTAATTGAGCAATTAGATTGTCCTAAATCCAGGTCAAGGGTCAAAAGTCTCACAAACATCGCAGAAAACCGCACCTTCGAACCCACCTGTTCAGAAGCCTGCGGCTTATAGGCCTCCACATGCGAAAAATGCTGCTGCTATTCAGGCAGAGGTATTGATTTTCAAGTTCCTCTCCCTTTCCATCTAAGTGAGGCCATTATGGTTTTTATATTTGAAGATTTCCAATTCAAGTTCTTATAAGCTAAGCTTTTTTGTAATGCAGTTGCTTGGAGAAGGCCCTAAAGAGTAAGTCCATTAATTATAGGCGTGTCATTTATCATACTCTTAACAGGCTAAATTCTGGGATTAACCGAATATATGAGTTAAATGCAGAACACTGAGTAAGAACGCCATGCGGAACAAGAAGAAAAGGGAGAAACAAAAGGAGAAGAAGGCAGGGGAAGCTGCTTCATCAGCCAATGATGTGTGAGGTATGCAGTATACAACATAGAATTCAGATGTTTCCATGTTCGCTTCTAGCATTTGCTCCAGGAGCTTTTGAATTTGAAGCTGAGAGCTTTCTCAACAACGGATTCAAGTGAAATATTAACTGCCAAGGGAGACAATAGGTAGGTTCAATCCTTCAAGAATTTTGAGAAAAATGTTAAATGTAACACAAGGCTTAAGAGTCTCTTGAGTACCAAGTTATTATTGGTCTTATCTTTATGGTTTTATAAACCTTAAAAAGGTGAACCATCCTTAGCTGCAGTTATCATGTTCTTGGATTATTTTCATTATGATTCGAAGTTTCAACGCCAAACTGACCAAAATCAGATCAAGCCAATATGATTGGAACCAAGAAAATTAAACAAATTGAACCAGCTATCATTTGCTGTATGCTTCAGAAATTGAGCTGAATACATGTAGTATATATAAACCAATTGAATCAAGTTTCTTTGATTTTTTTTCTTTTCCTATTTCGGCATGCTTGCTCAAAATACTTGTGGTTGTGAAA ATGGCCACCTCTCAACATCCACCACCTTTACAGATTCTTGTTCGAGGATCAGATGGTTTTTCAATTTGGAATGGACCCCCATTCATCGACAACCAACCCACCATCAACAAACTCGACAAGGTTGCTTGCACCAGTACGAAATTCAGTGAAGATGGATCCAAATTGCTGGTTACGAAGTCTGAAACTTTGACCATTTACGAATGCCGTGGTTTTGGAGAGATCAAGTCTTTTGAAGTACCCAATTTGCTTGCGGCTGCTTTGTCACCATGTGGGACTTATCTCCAGACATTTCAGAAATCTTCAACTCCTCAAGAAAAGAATGTTGTTCTCTGGAAGGTTGACACTGGTGGTCTTGTGTACTCTCAATTTCAGAAGAATATGACCAAAGTGTCATGGCCTGCAATTCGATTCAGCTCTGATGAAACTGTTGCCTGTCGGATGGCTACTAATGAGATACAGTTTTTTGATGCTAAAGATTTCTCTAAGGGAGTTATTCATCGGCTTAGAGTTCCAGGAGTCACTGCAATTGAACTCTCAAGGACACCTGGAACCCACATTGCAGCCTTTGTTCCCGAGTCCAAGGGGGTTCCTGCCAGTGTCCAAATCTTTGCTTGTGGAGATTCACAAACTCAACCGATTGCTCGACGAAGTTTTTTCCGTTGTTCAACGGTACAACTAAACTGGAACAATGGTTCTACTGGGCTTCTAATTGTTGTGCAAGCAGATGTAGATAAAACCAACCAGAGTTATTATGGTGAAACAAAGTTAAACTACTTGACAACCGATGGTGTTCATGAAGGACTTGTACCACTTCGTAAGCACTAA MATSQHPPPLQILVRGSDGFSIWNGPPFIDNQPTINKLDKVACTSTKFSEDGSKLLVTKSETLTIYECRGFGEIKSFEVPNLLAAALSPCGTYLQTFQKSSTPQEKNVVLWKVDTGGLVYSQFQKNMTKVSWPAIRFSSDETVACRMATNEIQFFDAKDFSKGVIHRLRVPGVTAIELSRTPGTHIAAFVPESKGVPASVQIFACGDSQTQPIARRSFFRCSTVQLNWNNGSTGLLIVVQADVDKTNQSYYGETKLNYLTTDGVHEGLVPLRKH Homology
BLAST of Cucsat.G16794.T7 vs. ExPASy Swiss-Prot
Match: O74965 (Eukaryotic translation initiation factor 2A OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC4B4.04 PE=1 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 3.7e-34 Identity = 82/266 (30.83%), Postives = 138/266 (51.88%), Query Frame = 0
BLAST of Cucsat.G16794.T7 vs. ExPASy Swiss-Prot
Match: Q5ZKC1 (Eukaryotic translation initiation factor 2A OS=Gallus gallus OX=9031 GN=EIF2A PE=2 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 3.2e-33 Identity = 89/278 (32.01%), Postives = 139/278 (50.00%), Query Frame = 0
BLAST of Cucsat.G16794.T7 vs. ExPASy Swiss-Prot
Match: Q4QRJ7 (Eukaryotic translation initiation factor 2A OS=Danio rerio OX=7955 GN=eif2a PE=2 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 2.7e-32 Identity = 85/267 (31.84%), Postives = 138/267 (51.69%), Query Frame = 0
BLAST of Cucsat.G16794.T7 vs. ExPASy Swiss-Prot
Match: Q8BJW6 (Eukaryotic translation initiation factor 2A OS=Mus musculus OX=10090 GN=Eif2a PE=1 SV=2) HSP 1 Score: 137.5 bits (345), Expect = 2.3e-31 Identity = 83/262 (31.68%), Postives = 131/262 (50.00%), Query Frame = 0
BLAST of Cucsat.G16794.T7 vs. ExPASy Swiss-Prot
Match: Q7ZY11 (Eukaryotic translation initiation factor 2A OS=Xenopus laevis OX=8355 GN=eif2a PE=2 SV=2) HSP 1 Score: 135.2 bits (339), Expect = 1.1e-30 Identity = 84/269 (31.23%), Postives = 137/269 (50.93%), Query Frame = 0
BLAST of Cucsat.G16794.T7 vs. NCBI nr
Match: XP_011653038.1 (eukaryotic translation initiation factor 2A [Cucumis sativus]) HSP 1 Score: 554 bits (1428), Expect = 2.72e-195 Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 0
BLAST of Cucsat.G16794.T7 vs. NCBI nr
Match: XP_008454042.1 (PREDICTED: eukaryotic translation initiation factor 2A [Cucumis melo] >KAA0044550.1 eukaryotic translation initiation factor 2A [Cucumis melo var. makuwa] >TYK17031.1 eukaryotic translation initiation factor 2A [Cucumis melo var. makuwa]) HSP 1 Score: 540 bits (1392), Expect = 8.08e-190 Identity = 264/273 (96.70%), Postives = 268/273 (98.17%), Query Frame = 0
BLAST of Cucsat.G16794.T7 vs. NCBI nr
Match: XP_022158386.1 (eukaryotic translation initiation factor 2A [Momordica charantia]) HSP 1 Score: 517 bits (1331), Expect = 1.35e-180 Identity = 251/273 (91.94%), Postives = 264/273 (96.70%), Query Frame = 0
BLAST of Cucsat.G16794.T7 vs. NCBI nr
Match: XP_038877052.1 (eukaryotic translation initiation factor 2A [Benincasa hispida]) HSP 1 Score: 515 bits (1326), Expect = 8.63e-180 Identity = 255/273 (93.41%), Postives = 263/273 (96.34%), Query Frame = 0
BLAST of Cucsat.G16794.T7 vs. NCBI nr
Match: KAE8649094.1 (hypothetical protein Csa_015000 [Cucumis sativus]) HSP 1 Score: 516 bits (1329), Expect = 1.69e-179 Identity = 271/324 (83.64%), Postives = 272/324 (83.95%), Query Frame = 0
BLAST of Cucsat.G16794.T7 vs. ExPASy TrEMBL
Match: A0A0A0KXB3 (Eukaryotic translation initiation factor 2A OS=Cucumis sativus OX=3659 GN=Csa_4G011690 PE=3 SV=1) HSP 1 Score: 554 bits (1428), Expect = 1.32e-195 Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 0
BLAST of Cucsat.G16794.T7 vs. ExPASy TrEMBL
Match: A0A5A7TMY6 (Eukaryotic translation initiation factor 2A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001770 PE=3 SV=1) HSP 1 Score: 540 bits (1392), Expect = 3.91e-190 Identity = 264/273 (96.70%), Postives = 268/273 (98.17%), Query Frame = 0
BLAST of Cucsat.G16794.T7 vs. ExPASy TrEMBL
Match: A0A1S3BXP8 (Eukaryotic translation initiation factor 2A OS=Cucumis melo OX=3656 GN=LOC103494586 PE=3 SV=1) HSP 1 Score: 540 bits (1392), Expect = 3.91e-190 Identity = 264/273 (96.70%), Postives = 268/273 (98.17%), Query Frame = 0
BLAST of Cucsat.G16794.T7 vs. ExPASy TrEMBL
Match: A0A6J1E0R9 (Eukaryotic translation initiation factor 2A OS=Momordica charantia OX=3673 GN=LOC111024883 PE=3 SV=1) HSP 1 Score: 517 bits (1331), Expect = 6.56e-181 Identity = 251/273 (91.94%), Postives = 264/273 (96.70%), Query Frame = 0
BLAST of Cucsat.G16794.T7 vs. ExPASy TrEMBL
Match: A0A6J1GXP1 (Eukaryotic translation initiation factor 2A OS=Cucurbita moschata OX=3662 GN=LOC111457778 PE=3 SV=1) HSP 1 Score: 506 bits (1304), Expect = 8.87e-177 Identity = 251/273 (91.94%), Postives = 261/273 (95.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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