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Cucsat.G16792.T6 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTAGCTCTTATTTCTAAATTTCATCGAGAGATCTTTCGCTGAAGAATGGGAATTTTAATTGTGTAGAGGAAGTCAATGGACGGGAGCTTACGTTATGGAATTTCAAGATTTGATTGATTTCTCAACACCTGAAGAAGCAAACCGATCAGATGAAGCTCGATATTCTTTTTTGCAAGGCGGATATGTCGAAGATTGGGATTCCCAAGGTAATAACCTTCATGCTGTACTTCATTTTCGTGCTGCAATTGCCCTTTTTTAATAAAATAGCATCAAACTTGGAAATTGATCATTACTTCCCCCCTCCACCCCCAAAAGTATTTTCATGTCAATTTTTAAACATTGATCTCAAACTTTTATTTAGGTGGTTGAGGTCCAACAGTCTTATTTATACACGAGGAAGGAGTTTTGGAATTTTTTTAATGTATTTTGTAAACGTCAAGTTGGGGTGTTCACGGTTTGGTAGCCAAACCAAACCGAACTGAGAATTTTCATTTTGTCATTTGGTTCTGTTTGGTCTATTTTAATGAACACCCTAATTGTCAAGACTGGAGAAACATTGAGCTTCTAAATTACCAAAACAAAGAAAATTACATTGTGATAAAATAGACTGGAAATCCAGAAGCCATCTTGAAAACTCGTTTAATTATTTTTACTGAAATGGAGAATTACTGGCTACATGGATTTTAGTTACATTGTCCACGACTTCAATGTATTAACTTTACTTAAAGCCTCACATTCATTGTGTCAAATTGCTCTCTCAAGCATTTTATCTGTGTTTCCAAGCAGAAAATACTGAGGAAGAAAATGGAGCACATGCTCTAGTAACCGCAACAGAGAAGGCTCTCCAGTTGCGTGATAATCGAAACTCACTTATTGAAGGAACTGCCAGGTCTGGAGCAGAATTTTTTGCAACTCGTTCCTTTCAAGGCTTAGATATTAACAATGGCAGTTTAGAGCCGGAGCCATATGTGATAGGGAGGAGTGGCAAGGCATCAGGGTATCAAGACGAGAAAAACAGGTAAGAAGAAAAATGCTGAAGATGTAGGCCATGGCAGGTGCTGGGAAAAAGAGGTTAGTGTTCAATTCTTCAAGGAGATATTAAAATTAGGTTTCTGAAGATAGTCTAAGTTTTGAAAAACTGTGGTATATGAATGAAAAACGTTATAAAACTGTTGTGCACGATGAAAGTGCTATTTAGAAGAAAGGATAATTTTATTTATTTCTTAGAACAAGTGATTGATGCAATCATAGTGTATAATAATAAATTTTGATTTAGATTCGACGATTGGTCTTTAGAATTTACTGTGCTAAACTGTTTTTCTTTTGTTTGAA ATGGAATTTCAAGATTTGATTGATTTCTCAACACCTGAAGAAGCAAACCGATCAGATGAAGCTCGATATTCTTTTTTGCAAGGCGGATATGTCGAAGATTGGGATTCCCAAGAAAATACTGAGGAAGAAAATGGAGCACATGCTCTAGTAACCGCAACAGAGAAGGCTCTCCAGTTGCGTGATAATCGAAACTCACTTATTGAAGGAACTGCCAGGTCTGGAGCAGAATTTTTTGCAACTCGTTCCTTTCAAGGCTTAGATATTAACAATGGCAGTTTAGAGCCGGAGCCATATGTGATAGGGAGGAGTGGCAAGGCATCAGGGTATCAAGACGAGAAAAACAGGTAA MEFQDLIDFSTPEEANRSDEARYSFLQGGYVEDWDSQENTEEENGAHALVTATEKALQLRDNRNSLIEGTARSGAEFFATRSFQGLDINNGSLEPEPYVIGRSGKASGYQDEKNR Homology
BLAST of Cucsat.G16792.T6 vs. NCBI nr
Match: XP_004152127.1 (2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 [Cucumis sativus] >KGN53024.1 hypothetical protein Csa_014391 [Cucumis sativus]) HSP 1 Score: 229 bits (584), Expect = 1.05e-70 Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0
BLAST of Cucsat.G16792.T6 vs. NCBI nr
Match: XP_008454039.1 (PREDICTED: diphthamide biosynthesis protein 2 isoform X2 [Cucumis melo]) HSP 1 Score: 216 bits (551), Expect = 2.32e-66 Identity = 108/115 (93.91%), Postives = 112/115 (97.39%), Query Frame = 0
BLAST of Cucsat.G16792.T6 vs. NCBI nr
Match: XP_008454038.1 (PREDICTED: diphthamide biosynthesis protein 2 isoform X1 [Cucumis melo]) HSP 1 Score: 216 bits (551), Expect = 8.81e-66 Identity = 108/115 (93.91%), Postives = 112/115 (97.39%), Query Frame = 0
BLAST of Cucsat.G16792.T6 vs. NCBI nr
Match: TYK17029.1 (diphthamide biosynthesis protein 2 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 216 bits (551), Expect = 2.37e-65 Identity = 108/115 (93.91%), Postives = 112/115 (97.39%), Query Frame = 0
BLAST of Cucsat.G16792.T6 vs. NCBI nr
Match: KAA0044552.1 (diphthamide biosynthesis protein 2 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 216 bits (551), Expect = 2.42e-65 Identity = 108/115 (93.91%), Postives = 112/115 (97.39%), Query Frame = 0
BLAST of Cucsat.G16792.T6 vs. ExPASy TrEMBL
Match: A0A0A0KW05 (2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 OS=Cucumis sativus OX=3659 GN=Csa_4G011710 PE=3 SV=1) HSP 1 Score: 229 bits (584), Expect = 5.08e-71 Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0
BLAST of Cucsat.G16792.T6 vs. ExPASy TrEMBL
Match: A0A1S3BYX1 (diphthamide biosynthesis protein 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494584 PE=4 SV=1) HSP 1 Score: 216 bits (551), Expect = 1.12e-66 Identity = 108/115 (93.91%), Postives = 112/115 (97.39%), Query Frame = 0
BLAST of Cucsat.G16792.T6 vs. ExPASy TrEMBL
Match: A0A1S3BYG9 (2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 OS=Cucumis melo OX=3656 GN=LOC103494584 PE=3 SV=1) HSP 1 Score: 216 bits (551), Expect = 4.27e-66 Identity = 108/115 (93.91%), Postives = 112/115 (97.39%), Query Frame = 0
BLAST of Cucsat.G16792.T6 vs. ExPASy TrEMBL
Match: A0A5D3D327 (2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001750 PE=3 SV=1) HSP 1 Score: 216 bits (551), Expect = 1.15e-65 Identity = 108/115 (93.91%), Postives = 112/115 (97.39%), Query Frame = 0
BLAST of Cucsat.G16792.T6 vs. ExPASy TrEMBL
Match: A0A5A7TMM8 (2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003010 PE=3 SV=1) HSP 1 Score: 216 bits (551), Expect = 1.17e-65 Identity = 108/115 (93.91%), Postives = 112/115 (97.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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