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Cucsat.G16792.T5 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATCCAGATGAATATTATTCTACTCTATTGTTTTGTGGATTTCAAACCCTTTTTTAATTTGGTGATGCTTTATGCAGCTGGTTACCTCCATATTATTCATCAGATGAAAGAACTGATCACTGGAGCAGGGAAGAAGGCTTATACGCTTGTTATGGGAAAACCCAATCCTGCAAAGCTTGCCAACTTCCCTGAGGTATTTATCCGACTCATGACTTAATTTGGGTGTTTTTTCTTTTTACCATATCTTTACTGGTAGGTTAATTCCTTTGCATTTATTCCAGTGTGGTGTATTCATATATGTTTCTTGCGCCCAAACTGCACTTATGGATAGCAAAGAGTATCTTGCTCCCGTTATTACTCCATTTGAAGCCACACTAGCTTTCAGCAGGTACCTTTAATGTCTGTCTCGTTAAATCATGCCATTTGAGCTGTCTTAGCTCTATAAAAAACTCAGGACCAAAATAGATTTAACATCTTCATGAAGTCAAGGTAGAACCATACTTCTAGTTATGATTTTGTGGTTTTTTTTTTTTCCAATTATTGTAGTAGTTAAATTCACCTGTTCAAGCATTGTCCAGTGGATCAAGCATGCGCAGAAATTATTTTCCAATAAACAGATGAATCTATGCAAACATTTTAAAGTTGAATGGAGGAAGGATGTCTATGATTATTTGGATATAATAGTGGATTATCTTAGCTCTTATTTCTAAATTTCATCGAGAGATCTTTCGCTGAAGAATGGGAATTTTAATTGTGTAGAGGAAGTCAATGGACGGGAGCTTACGTTATGGAATTTCAAGATTTGATTGATTTCTCAACACCTGAAGAAGCAAACCGATCAGATGAAGCTCGATATTCTTTTTTGCAAGGCGGATATGTCGAAGATTGGGATTCCCAAGGTAATAACCTTCATGCTGTACTTCATTTTCGTGCTGCAATTGCCCTTTTTTAATAAAATAGCATCAAACTTGGAAATTGATCATTACTTCCCCCCTCCACCCCCAAAAGTATTTTCATGTCAATTTTTAAACATTGATCTCAAACTTTTATTTAGGTGGTTGAGGTCCAACAGTCTTATTTATACACGAGGAAGGAGTTTTGGAATTTTTTTAATGTATTTTGTAAACGTCAAGTTGGGGTGTTCACGGTTTGGTAGCCAAACCAAACCGAACTGAGAATTTTCATTTTGTCATTTGGTTCTGTTTGGTCTATTTTAATGAACACCCTAATTGTCAAGACTGGAGAAACATTGAGCTTCTAAATTACCAAAACAAAGAAAATTACATTGTGATAAAATAGACTGGAAATCCAGAAGCCATCTTGAAAACTCGTTTAATTATTTTTACTGAAATGGAGAATTACTGGCTACATGGATTTTAGTTACATTGTCCACGACTTCAATGTATTAACTTTACTTAAAGCCTCACATTCATTGTGTCAAATTGCTCTCTCAAGCATTTTATCTGTGTTTCCAAGCAGAAAATACTGAGGAAGAAAATGGAGCACATGCTCTAGTAACCGCAACAGAGAAGGCTCTCCAGTTGCGTGATAATCGAAACTCACTTATTGAAGGAACTGCCAGGTCTGGAGCAGAATTTTTTGCAACTCGTTCCTTTCAAGGCTTAGATATTAACAATGGCAGTTTAGAGCCGGAGCCATATGTGATAGGGAGGAGTGGCAAGGCATCAGGGTATCAAGACGAGAAAAACAGGTAAGAAGAAAAATGCTGAAGATGTAGGCCATGGCAGGTGCTGGGAAAAAGAGGTTAGTGTTCAATTCTTCAAGGAGATATTAAAATTAGGTTTCTGAAGATAGTCTAAGTTTTGAAAAACTGTGGTATATGAATGAAAAACGTTATAAAACTGTTGTGCACGATGAAAGTGCTATTTAGAAGAAAGGATAATTTTATTTATTTCTTAGAACAAGTGATTGATGCAATCATAGTGTATAATAATAAATTTTGATTTAGATTCGACGATTGGTCTTTAGAATTTACTGTGCTAAACTGTTT ATCCAGATGAATATTATTCTACTCTATTGTTTTGTGGATTTCAAACCCTTTTTTAATTTGGTGATGCTTTATGCAGCTGGTTACCTCCATATTATTCATCAGATGAAAGAACTGATCACTGGAGCAGGGAAGAAGGCTTATACGCTTGTTATGGGAAAACCCAATCCTGCAAAGCTTGCCAACTTCCCTGAGTGTGGTGTATTCATATATGTTTCTTGCGCCCAAACTGCACTTATGGATAGCAAAGAGTATCTTGCTCCCGTTATTACTCCATTTGAAGCCACACTAGCTTTCAGCAGAGGAAGTCAATGGACGGGAGCTTACGTTATGGAATTTCAAGATTTGATTGATTTCTCAACACCTGAAGAAGCAAACCGATCAGATGAAGCTCGATATTCTTTTTTGCAAGGCGGATATGTCGAAGATTGGGATTCCCAAGAAAATACTGAGGAAGAAAATGGAGCACATGCTCTAGTAACCGCAACAGAGAAGGCTCTCCAGTTGCGTGATAATCGAAACTCACTTATTGAAGGAACTGCCAGGTCTGGAGCAGAATTTTTTGCAACTCGTTCCTTTCAAGGCTTAGATATTAACAATGGCAGTTTAGAGCCGGAGCCATATGTGATAGGGAGGAGTGGCAAGGCATCAGGGTATCAAGACGAGAAAAACAGGTAA IQMNIILLYCFVDFKPFFNLVMLYAAGYLHIIHQMKELITGAGKKAYTLVMGKPNPAKLANFPECGVFIYVSCAQTALMDSKEYLAPVITPFEATLAFSRGSQWTGAYVMEFQDLIDFSTPEEANRSDEARYSFLQGGYVEDWDSQENTEEENGAHALVTATEKALQLRDNRNSLIEGTARSGAEFFATRSFQGLDINNGSLEPEPYVIGRSGKASGYQDEKNR Homology
BLAST of Cucsat.G16792.T5 vs. ExPASy Swiss-Prot
Match: A7SKJ3 (2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 OS=Nematostella vectensis OX=45351 GN=dph2 PE=3 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 8.0e-27 Identity = 78/202 (38.61%), Postives = 108/202 (53.47%), Query Frame = 0
BLAST of Cucsat.G16792.T5 vs. ExPASy Swiss-Prot
Match: Q5ZKI2 (2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 OS=Gallus gallus OX=9031 GN=DPH2 PE=2 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 7.5e-25 Identity = 72/205 (35.12%), Postives = 106/205 (51.71%), Query Frame = 0
BLAST of Cucsat.G16792.T5 vs. ExPASy Swiss-Prot
Match: Q10206 (2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dph2 PE=3 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 9.8e-25 Identity = 63/211 (29.86%), Postives = 109/211 (51.66%), Query Frame = 0
BLAST of Cucsat.G16792.T5 vs. ExPASy Swiss-Prot
Match: A4QN59 (2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 OS=Danio rerio OX=7955 GN=dph2 PE=2 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 1.3e-24 Identity = 71/208 (34.13%), Postives = 107/208 (51.44%), Query Frame = 0
BLAST of Cucsat.G16792.T5 vs. ExPASy Swiss-Prot
Match: Q6DE00 (2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 OS=Xenopus laevis OX=8355 GN=dph2 PE=2 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 1.7e-21 Identity = 70/208 (33.65%), Postives = 109/208 (52.40%), Query Frame = 0
BLAST of Cucsat.G16792.T5 vs. NCBI nr
Match: XP_004152127.1 (2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 [Cucumis sativus] >KGN53024.1 hypothetical protein Csa_014391 [Cucumis sativus]) HSP 1 Score: 402 bits (1032), Expect = 2.51e-136 Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0
BLAST of Cucsat.G16792.T5 vs. NCBI nr
Match: XP_008454039.1 (PREDICTED: diphthamide biosynthesis protein 2 isoform X2 [Cucumis melo]) HSP 1 Score: 387 bits (995), Expect = 1.68e-131 Identity = 191/199 (95.98%), Postives = 195/199 (97.99%), Query Frame = 0
BLAST of Cucsat.G16792.T5 vs. NCBI nr
Match: XP_008454038.1 (PREDICTED: diphthamide biosynthesis protein 2 isoform X1 [Cucumis melo]) HSP 1 Score: 387 bits (995), Expect = 1.01e-130 Identity = 191/199 (95.98%), Postives = 195/199 (97.99%), Query Frame = 0
BLAST of Cucsat.G16792.T5 vs. NCBI nr
Match: TYK17029.1 (diphthamide biosynthesis protein 2 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 387 bits (995), Expect = 4.12e-130 Identity = 191/199 (95.98%), Postives = 195/199 (97.99%), Query Frame = 0
BLAST of Cucsat.G16792.T5 vs. NCBI nr
Match: KAA0044552.1 (diphthamide biosynthesis protein 2 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 387 bits (995), Expect = 4.24e-130 Identity = 191/199 (95.98%), Postives = 195/199 (97.99%), Query Frame = 0
BLAST of Cucsat.G16792.T5 vs. ExPASy TrEMBL
Match: A0A0A0KW05 (2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 OS=Cucumis sativus OX=3659 GN=Csa_4G011710 PE=3 SV=1) HSP 1 Score: 402 bits (1032), Expect = 1.22e-136 Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0
BLAST of Cucsat.G16792.T5 vs. ExPASy TrEMBL
Match: A0A1S3BYX1 (diphthamide biosynthesis protein 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494584 PE=4 SV=1) HSP 1 Score: 387 bits (995), Expect = 8.12e-132 Identity = 191/199 (95.98%), Postives = 195/199 (97.99%), Query Frame = 0
BLAST of Cucsat.G16792.T5 vs. ExPASy TrEMBL
Match: A0A1S3BYG9 (2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 OS=Cucumis melo OX=3656 GN=LOC103494584 PE=3 SV=1) HSP 1 Score: 387 bits (995), Expect = 4.91e-131 Identity = 191/199 (95.98%), Postives = 195/199 (97.99%), Query Frame = 0
BLAST of Cucsat.G16792.T5 vs. ExPASy TrEMBL
Match: A0A5D3D327 (2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001750 PE=3 SV=1) HSP 1 Score: 387 bits (995), Expect = 1.99e-130 Identity = 191/199 (95.98%), Postives = 195/199 (97.99%), Query Frame = 0
BLAST of Cucsat.G16792.T5 vs. ExPASy TrEMBL
Match: A0A5A7TMM8 (2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003010 PE=3 SV=1) HSP 1 Score: 387 bits (995), Expect = 2.06e-130 Identity = 191/199 (95.98%), Postives = 195/199 (97.99%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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