
Cucsat.G16789.T33 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TACACGGGAATTGACAATTTAAATGTCTAAATATTTTGTAGTTGATGAGATGTACCTTGCATCGCTGATTAATAAAGGCCGGGAAGTTTATGCAAATGGAACAACCAATCCCTCTGTTCTTCCTGCTGAAGTAGTCCTACAAATGGTGACAATAAATGGCGCAAAATCAGTACTTTGGGATAATGAAATAGGATCACTTGAAGTTGGGAAGAAGGTAATTTTTTCTTTAGGCATGTTTCTTTCAATTTTCATTTCAATTTTTACTTCTTTTGTTCTGTGTTATTTAGGTAGAAACTAATGTGGATATTGCTCAATCGTGATGGTTTAGAGCTTAACATACGACTTACTGGGTCTTTGGTCATTATATAGGCCCATTGGCAGATAGTTGTAATAAATTATTTGTGACAAAAAGTTCCGTTTTAATCATTGATGATCTAAGAAGAATTATTTTCACTAGTACTAGGTCTGTGATTTTTAAATGAAACTGCAGGAGCCACAAGAGGTATTCTGATAACGAACAGTTACAATGTTTAAATATTATTTGTGAATGTTCAGGTGAGTACCCACTTTTCTGCCAATTACTTCTTCAATATTTTGATGTGAAAATACTCACAAGACTCAAGGTCAAGACATGGCAACACGCCATTTTTTAAAAAAGTGGCACGACACATTGGGGAGGGTGTGGACACAAGTTGTTGTCCAAGACCTTGTACTAACCCATTTTGAATTTAAATAACCAATGTAATTCCAAGCGTATCAAAGTTATGTATAAAGAAAAAAGGGATTTTTTTGGAGTTAAATTAGATAAATAAAACCACTGGCATTTCTACTGGTTTAGCCATTAATGCAACCTGTTTTTTTCAAACGTTTGAGGATGATTTGTCGCTCTAACTTGATTGTAGGCGGATATGGTTGTGATCAACCCTTCCTCTTGGTCCATGGTTCCTTCCCACGACAGGTATTTATTTCCTTCTCAGAAAAACAATTGGATGTTTCATCTTCTAAATCTTAAAAGCTTTGTACGATAAGTTTTGAGCACGAGATCTATAAAAGGAACTGATGGCATTGCTTAATTGATATTGCAGCATTTCCTGCATCGTCTACAGTATGAGAACTGAAAATGTCATCTCTGTAATGTGTAATGGGCAGTGGATAATGAAAGATAAGAAGATCATTAATGTGAATGAGGTATTTCACTTCAATTTTTGTTCTTAGACAATATGACCATTGCTTTACTTCAAATCACAATAGCTTTTAATCGATCTACTAATCAATCCAAGTCATTGATTCATGCATTTCTTATTCTCGAGGTTGGATGTTCAAATTCTCTACTCACACTTGTTTTTGTAAATTGAAACCAAACAATGAAAGTAGAATACTTGTTTTAAACCCAATGATGCAAGTAGAAATAGCTTTAGATTTAATTTGATATACAAAAAAATTACTTGGTAGTCTCAAGATTGAACATGTCTAACGAACTCAAATTTTGAATGAACTCAGGAAGATGTAATTGTGATGGCAAAACAAGCTTCCAGGGAACTGCTTGAGAGAGCAGGAATAAGAATTCCGAACAGAATGAATTTCATCTAATTGGCCAAGCAGGTTATCTAATCTTCAGTTTGTTTTAAATTTTCATTCAATTGCTTAGCTTGGTTTGTTTTGTTCATATATTTTAATGAAATGGTGTTTTAAACCTAACTCGTTATGTTTACCCATATGGTACTTTTTTTCTAGTTAGTTTCACTTTAGAGCTTGTAAAGGTTCTAGTGGCCACACTTCTTTGAACATTTTTTTTTTAATGAAGTTTCTTTTTAGTTACAAAATTCTTTCTTCTCTCAATCAAATTTTGTATGGAATTGTTTAAAATATTTTGCTAAAAGTGCATATATGATTTACT ATGTCTAAATATTTTGTAGTTGATGAGATGTACCTTGCATCGCTGATTAATAAAGGCCGGGAAGTTTATGCAAATGGAACAACCAATCCCTCTGTTCTTCCTGCTGAAGTAGTCCTACAAATGGTGACAATAAATGGCGCAAAATCAGTACTTTGGGATAATGAAATAGGATCACTTGAAGTTGGGAAGAAGGCGGATATGGTTGTGATCAACCCTTCCTCTTGGTCCATGGTTCCTTCCCACGACAGCATTTCCTGCATCGTCTACAGTATGAGAACTGAAAATGTCATCTCTGTAATGTGTAATGGGCAGTGGATAATGAAAGATAAGAAGATCATTAATGTGAATGAGGAAGATGTAATTGTGATGGCAAAACAAGCTTCCAGGGAACTGCTTGAGAGAGCAGGAATAAGAATTCCGAACAGAATGAATTTCATCTAA MSKYFVVDEMYLASLINKGREVYANGTTNPSVLPAEVVLQMVTINGAKSVLWDNEIGSLEVGKKADMVVINPSSWSMVPSHDSISCIVYSMRTENVISVMCNGQWIMKDKKIINVNEEDVIVMAKQASRELLERAGIRIPNRMNFI Homology
BLAST of Cucsat.G16789.T33 vs. ExPASy Swiss-Prot
Match: B0K8R8 (5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) OX=340099 GN=mtaD PE=3 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 1.3e-17 Identity = 49/127 (38.58%), Postives = 81/127 (63.78%), Query Frame = 0
BLAST of Cucsat.G16789.T33 vs. ExPASy Swiss-Prot
Match: B0K2W0 (5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Thermoanaerobacter sp. (strain X514) OX=399726 GN=mtaD PE=3 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 1.3e-17 Identity = 49/127 (38.58%), Postives = 81/127 (63.78%), Query Frame = 0
BLAST of Cucsat.G16789.T33 vs. ExPASy Swiss-Prot
Match: Q0AYV2 (5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) OX=335541 GN=mtaD PE=3 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 6.0e-15 Identity = 45/127 (35.43%), Postives = 80/127 (62.99%), Query Frame = 0
BLAST of Cucsat.G16789.T33 vs. ExPASy Swiss-Prot
Match: Q92342 (Uncharacterized protein C1F8.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC1F8.04c PE=3 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 7.9e-15 Identity = 49/138 (35.51%), Postives = 86/138 (62.32%), Query Frame = 0
BLAST of Cucsat.G16789.T33 vs. ExPASy Swiss-Prot
Match: B1I2P4 (5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Desulforudis audaxviator (strain MP104C) OX=477974 GN=mtaD PE=3 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 1.3e-14 Identity = 46/128 (35.94%), Postives = 84/128 (65.62%), Query Frame = 0
BLAST of Cucsat.G16789.T33 vs. NCBI nr
Match: XP_004152121.1 (uncharacterized protein LOC101216449 isoform X2 [Cucumis sativus] >KGN53034.1 hypothetical protein Csa_015175 [Cucumis sativus]) HSP 1 Score: 279 bits (714), Expect = 7.67e-90 Identity = 140/141 (99.29%), Postives = 141/141 (100.00%), Query Frame = 0
BLAST of Cucsat.G16789.T33 vs. NCBI nr
Match: XP_031740508.1 (uncharacterized protein LOC101216449 isoform X1 [Cucumis sativus]) HSP 1 Score: 279 bits (714), Expect = 2.21e-89 Identity = 140/141 (99.29%), Postives = 141/141 (100.00%), Query Frame = 0
BLAST of Cucsat.G16789.T33 vs. NCBI nr
Match: XP_008454030.1 (PREDICTED: 5-methylthioadenosine/S-adenosylhomocysteine deaminase-like [Cucumis melo] >TYK17022.1 5-methylthioadenosine/S-adenosylhomocysteine deaminase-like [Cucumis melo var. makuwa]) HSP 1 Score: 273 bits (699), Expect = 1.39e-87 Identity = 136/141 (96.45%), Postives = 139/141 (98.58%), Query Frame = 0
BLAST of Cucsat.G16789.T33 vs. NCBI nr
Match: KAA0044562.1 (5-methylthioadenosine/S-adenosylhomocysteine deaminase-like [Cucumis melo var. makuwa]) HSP 1 Score: 273 bits (699), Expect = 1.39e-87 Identity = 136/141 (96.45%), Postives = 139/141 (98.58%), Query Frame = 0
BLAST of Cucsat.G16789.T33 vs. NCBI nr
Match: XP_038896079.1 (5-methylthioadenosine/S-adenosylhomocysteine deaminase-like isoform X1 [Benincasa hispida]) HSP 1 Score: 271 bits (694), Expect = 7.86e-87 Identity = 134/141 (95.04%), Postives = 140/141 (99.29%), Query Frame = 0
BLAST of Cucsat.G16789.T33 vs. ExPASy TrEMBL
Match: A0A0A0KW12 (Amidohydro-rel domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G011800 PE=4 SV=1) HSP 1 Score: 279 bits (714), Expect = 3.71e-90 Identity = 140/141 (99.29%), Postives = 141/141 (100.00%), Query Frame = 0
BLAST of Cucsat.G16789.T33 vs. ExPASy TrEMBL
Match: A0A5D3CZP4 (5-methylthioadenosine/S-adenosylhomocysteine deaminase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001680 PE=4 SV=1) HSP 1 Score: 273 bits (699), Expect = 6.73e-88 Identity = 136/141 (96.45%), Postives = 139/141 (98.58%), Query Frame = 0
BLAST of Cucsat.G16789.T33 vs. ExPASy TrEMBL
Match: A0A5A7TMN5 (5-methylthioadenosine/S-adenosylhomocysteine deaminase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003110 PE=4 SV=1) HSP 1 Score: 273 bits (699), Expect = 6.73e-88 Identity = 136/141 (96.45%), Postives = 139/141 (98.58%), Query Frame = 0
BLAST of Cucsat.G16789.T33 vs. ExPASy TrEMBL
Match: A0A1S3BX59 (5-methylthioadenosine/S-adenosylhomocysteine deaminase-like OS=Cucumis melo OX=3656 GN=LOC103494577 PE=4 SV=1) HSP 1 Score: 273 bits (699), Expect = 6.73e-88 Identity = 136/141 (96.45%), Postives = 139/141 (98.58%), Query Frame = 0
BLAST of Cucsat.G16789.T33 vs. ExPASy TrEMBL
Match: A0A6J1CV72 (uncharacterized protein LOC111014672 OS=Momordica charantia OX=3673 GN=LOC111014672 PE=4 SV=1) HSP 1 Score: 265 bits (677), Expect = 9.65e-85 Identity = 128/141 (90.78%), Postives = 140/141 (99.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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