
Cucsat.G16789.T26 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GGGGAAGGGTTGCCAGCTCCTTGGGCTGCTGTAACAACTGATGATTGCATTCAGGTTTATCATGTTTAACTTTATATATTAATGGTTCTCTCTTTTACCATTTTTCTTTAACAATAGTAGAGTTCATTCATATGATTAGCAATGTAGAGCTAGTATTTAGTTTAAACTTCGACATTAATGACTTTCAAGTCCTCAAGCTTTTAGAGAATTTTTGTGTGGATAACAGATTAAATGATTAGCTTTATCCTAGACTAACTGCTACTATATGCTGATTGAAAATTATCAAAATGTTTCTCCGGAGTTTACCTTGCAACTTGGAAGATGAAAGAGAGGCAAATTTTTTAATAATTACGTTGATAAAATTATTGGTTAAGAAGTTCTTATGTTCATGGTCAGAAGGTTAAGTCACTTTGTTGTTTTCGGTTTTGTGAAAGTGATTTGCTCCCTGTCCTTCTAAATAAGTATGTTAATTATCAAAACTATATTTAACAATTTCTGAATTTTCAATTTTCAAGGGCAGTCTCAAAAGGAGCTTTACAAGAAGCACCATAACACAGCAGATGGGCGCATCAGAATATGGTTTGGTATCAGACAAATTATGAATGCAACAGACCGTCTATTGATTGAAACAAGGGATAATGCATTAGAACTTGAAACCGGGATCCACATGGTGCTTCTATCTTCTTTACTTATGCTTTTGCAGTCTCAAAATTGTTCAAATTTTATTGAATTTTATGTCCTATCAGTGGGGATAAAGTGGTCAATCAGTTGTTGATTTTGACTTTATTTGTTATGTGCATTTTAGCATGTTGCAGAAATAGCCTATGAGAACCAGAAAGTGATAAATGAACGAAAAGTTGATCATGGAACAGTTACGTACTTGGAGAAAATACAGTTTCTGGGAAACAATTTACTTTCTGCACATACTGTTTGGGTCAATGACAATGAGGTGAGAAGTCATTCTCGTTTCTACGAGCTCTGTGTTAGACATTCTACATGGTTTCTTATTTCTGTACATATTTTCATCTTCTGCAAAAATATTTATAAAGTCAGCTTTTCATAAGCTGAATGGAAGAAGAAAGGTTGCCCAAAGCTCCATACATTTTATTATCTCTTGGAAGTTTTTGGTTTATATATTGCTTACTAGATCTTTCAATTATTAACATCTGTTTAGTGCTGCGTTGTTCAAAACTATAATTCTCAGAAGCCAAACAAGGATTTAGTAATTGTTTGGTGGAACCAAACCAGCCATACTCAACAGCTAAGCTGTTGATTGTTCTTTTTTTCTTTTTTTGAAAAAAAAATGCTTTTGTTTTTTCATTAAGAAACATGAAAAGACATTCAAGGGGATAAAAAGATTAGTCCCTCAAAAGGAATTCAAGTACTAGCTACGTAGGAACATACTCCAACCCAAAACTTGTAGATTCTTTGGTTACTTGTGCTATAAAGTTTGTTGTTGCAAGGTTTCCATTGGATAGTTGACCAAACCGATCAAGTGCATGCCCAACATGGTTGGCAGTGACAAAGCCATAGTGTGGTTGAATCTTAGGTTAGCATGAACATTGGTGTGATATATGTATGCTAAATACCCTCCAATGTTTAAGCTAGTACAAGTTTCGGGTTTAACCTAATTTTGATATAGTAGAGAGCATGTCCTGATTGCAGCTAGTCATAGTTTGTATTGTAAGTAGGGCCAAACATGCATACCAATCACAACTTTTGATAGATGCAACTTAATGGTGTTTAGCCTGCCAAGTTGTTCATCAAGCACAGCCTAAGTTGAGGCTTGGTAGGGCATCATAGTAAACTTTGCAGGCTTTTGAATGGATTTGATGCTCCCTTAGCTACAACGAGGAAGGATGTAATGAGATGCACTAATTACGTCAAATATGACTAATGACACAAAATGATTGTAGAATATGGATATCTAACGTGATCTAGGATATCTAATGTGATCTTGAGTCACATGCTATATTAGAACTCTTGCGCCAGTTTAGTTTCAGGTCTCACCTCAGCCATGGTTACCAGCTGAGACTAACCTGGCCAGGAAGCTTTGGTCTCCCATTTTTAGCCTTGACTTAGGCCAAGTTGCCTTCTGGTCTACCTAGGCTATGTTACTCCCTAGTCTCACTTTGGGGCTGTGGCTTTTAGTCACTGTCGGTTGGACTAGGTTCCCCCTTGCTCAGCGGCTTTCTTATCTCATCTAGGTCAGGCTATGGCTAGAGCTTCTCAAATATGTCTTTATGGGAATTGTGTAGGTAGGGTTTCTTTTATTGCGTAAAAGCTGCAGAGAGCTTTAGGAGAGGAAGATCCCAGCCTCCTTGTAAAGGTGCTGGGTAAGCATTGTTATTTCCTTTTATATTTTGTTGTTGAACTCTTGTATTTGACTGAAAGTAATATAAATAACAGAGTGCTACCTCTGTTTTAGCCTTTTTTGTTAGGATTGATTGTGATATTTGAGTTAGAATCCTAACATGGTGCTTTGGTGTTACTTGGACAACCAAAGGGGCCATCCTTGGGAAGGTCCATTGTCAATCTGAAGCTGAACATTTTGATGGATTCTATTAAAAAACCTATGCTAGTTAGGCAATTGCTTGAAATGTGTACAAATTTTTAACGCAAATATTTTATTCTTAAATATCAAATGCCATCAAGTATTCGATTAAATTGAACTAATTTAGCATTTGGAGTAGATTTGAACTTTTGGGCATTGTTTGTTGCCATCTGTTTCATTCAAGAATATGCTTTTGGATTAATAAATACTTTTATGTCCATGTTTTCGTTACATTCTTTTATGAATCAAGATTAACTGATATCTTGTTAGATTAGTTTTCTTTCAAGGAATGGGGTCAAAGTATCCCACTGTCCAGCTTCTGCAATGAGAATGCTTGGTTTTGCACCTATCAGAGAGATGCTTGATGCTGGTATTTGTGTTTCCATTGGAACAGATGGAGCACCGTCAAATAATCGAATGAGCATAGGTTTGTTTCAGTCCGGAAATTCTAATGAATTGAACATTATTTCATGTGTTAGTTTATAGAAATTATTTAACGGGATAAAAGAAGGTTGATGGTTTTATACTTTTTGAGTATGAGAGAGTAAAAGCCTGCATTCTTTTAACTATACATCTAGTGGTTAGAATAGTAGCACTGCCAGCAGGCGGCCACAGAATTTTTTTTTGTCAAATCATGCATTTTACTAAGAACTGACAAACTCTCTTCTAAACACCTCACTTTTAAGGATTATTTTGGCACACCCTCGCATGTTAATCCAGTGGAACTTCTTATATTGGCTGTCATATGGACTTTAGTGAGTACATATTTTGGGTCTATTGGCATTAGTGTCTTACCCCAGAGATGAATGTAACCTAGAAAAAATTTGATTGGCTATTGGCTTTTGGAGTCTCCCCTTTCTCATTAATCAATGAAATCTTTCTTGTGTGTGTGTGTGTAAAGAAAAAAAAAATGTAACATTGAAAAATGCAGACAAAATGTTTGATCAGAACACAGTAACCTTGACCTCAACTTTATGGACTCTTCTTGAAAAAAAATTCCGCATTGCACCATGCATATTAGTACACGGGAATTGACAATTTAAATGTCTAAATATTTTGTAGTTGATGAGATGTACCTTGCATCGCTGATTAATAAAGGCCGGGAAGTTTATGCAAATGGAACAACCAATCCCTCTGTTCTTCCTGCTGAAGTAGTCCTACAAATGGTGACAATAAATGGCGCAAAATCAGTACTTTGGGATAATGAAATAGGATCACTTGAAGTTGGGAAGAAGGTAATTTTTTCTTTAGGCATGTTTCTTTCAATTTTCATTTCAATTTTTACTTCTTTTGTTCTGTGTTATTTAGGTAGAAACTAATGTGGATATTGCTCAATCGTGATGGTTTAGAGCTTAACATACGACTTACTGGGTCTTTGGTCATTATATAGGCCCATTGGCAGATAGTTGTAATAAATTATTTGTGACAAAAAGTTCCGTTTTAATCATTGATGATCTAAGAAGAATTATTTTCACTAGTACTAGGTCTGTGATTTTTAAATGAAACTGCAGGAGCCACAAGAGGTATTCTGATAACGAACAGTTACAATGTTTAAATATTATTTGTGAATGTTCAGGTGAGTACCCACTTTTCTGCCAATTACTTCTTCAATATTTTGATGTGAAAATACTCACAAGACTCAAGGTCAAGACATGGCAACACGCCATTTTTTAAAAAAGTGGCACGACACATTGGGGAGGGTGTGGACACAAGTTGTTGTCCAAGACCTTGTACTAACCCATTTTGAATTTAAATAACCAATGTAATTCCAAGCGTATCAAAGTTATGTATAAAGAAAAAAGGGATTTTTTTGGAGTTAAATTAGATAAATAAAACCACTGGCATTTCTACTGGTTTAGCCATTAATGCAACCTGTTTTTTTCAAACGTTTGAGGATGATTTGTCGCTCTAACTTGATTGTAGGCGGATATGGTTGTGATCAACCCTTCCTCTTGGTCCATGGTTCCTTCCCACGACAGGTATTTATTTCCTTCTCAGAAAAACAATTGGATGTTTCATCTTCTAAATCTTAAAAGCTTTGTACGATAAGTTTTGAGCACGAGATCTATAAAAGGAACTGATGGCATTGCTTAATTGATATTGCAGCATTTCCTGCATCGTCTACAGTATGAGAACTGAAAATGTCATCTCTGTAATGTGTAATGGGCAGTGGATAATGAAAGATAAGAAGATCATTAATGTGAATGAGGTATTTCACTTCAATTTTTGTTCTTAGACAATATGACCATTGCTTTACTTCAAATCACAATAGCTTTTAATCGATCTACTAATCAATCCAAGTCATTGATTCATGCATTTCTTATTCTCGAGGTTGGATGTTCAAATTCTCTACTCACACTTGTTTTTGTAAATTGAAACCAAACAATGAAAGTAGAATACTTGTTTTAAACCCAATGATGCAAGTAGAAATAGCTTTAGATTTAATTTGATATACAAAAAAATTACTTGGTAGTCTCAAGATTGAACATGTCTAACGAACTCAAATTTTGAATGAACTCAGGAAGATGTAATTGTGATGGCAAAACAAGCTTCCAGGGAACTGCTTGAGAGAGCAGGAATAAGAATTCCGAACAGAATGAATTTCATCTAATTGGCCAAGCAGGTTATCTAATCTTCAGTTTGTTTTAAATTTTCATTCAATTGCTTAGCTTGGTTTGTTTTGTTCATATATTTTAATGAAATGGTGTTTTAAACCTAACTCGTTATGTTTACCCATATGGTACTTTTTTTCTAGTTAGTTTCACTTTAGAGCTTGTAAAGGTTCTAGTGGCCACACTTCTTTGAACATTTTTTTTTTAATGAAGTTTCTTTTTAGTTACAAAATTCTTTCTTCTCTCAATCAAATTTTGTATGGAATTGTTTAAAATATTTTGCTAAAAGTGCATATATGATTTACT ATGAGAATGCTTGGTTTTGCACCTATCAGAGAGATGCTTGATGCTGGTATTTGTGTTTCCATTGGAACAGATGGAGCACCGTCAAATAATCGAATGAGCATAGTTGATGAGATGTACCTTGCATCGCTGATTAATAAAGGCCGGGAAGTTTATGCAAATGGAACAACCAATCCCTCTGTTCTTCCTGCTGAAGTAGTCCTACAAATGGTGACAATAAATGGCGCAAAATCAGTACTTTGGGATAATGAAATAGGATCACTTGAAGTTGGGAAGAAGGCGGATATGGTTGTGATCAACCCTTCCTCTTGGTCCATGGTTCCTTCCCACGACAGCATTTCCTGCATCGTCTACAGTATGAGAACTGAAAATGTCATCTCTGTAATGTGTAATGGGCAGTGGATAATGAAAGATAAGAAGATCATTAATGTGAATGAGGAAGATGTAATTGTGATGGCAAAACAAGCTTCCAGGGAACTGCTTGAGAGAGCAGGAATAAGAATTCCGAACAGAATGAATTTCATCTAA MRMLGFAPIREMLDAGICVSIGTDGAPSNNRMSIVDEMYLASLINKGREVYANGTTNPSVLPAEVVLQMVTINGAKSVLWDNEIGSLEVGKKADMVVINPSSWSMVPSHDSISCIVYSMRTENVISVMCNGQWIMKDKKIINVNEEDVIVMAKQASRELLERAGIRIPNRMNFI Homology
BLAST of Cucsat.G16789.T26 vs. ExPASy Swiss-Prot
Match: B0K8R8 (5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) OX=340099 GN=mtaD PE=3 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 7.4e-28 Identity = 65/158 (41.14%), Postives = 104/158 (65.82%), Query Frame = 0
BLAST of Cucsat.G16789.T26 vs. ExPASy Swiss-Prot
Match: B0K2W0 (5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Thermoanaerobacter sp. (strain X514) OX=399726 GN=mtaD PE=3 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 7.4e-28 Identity = 65/158 (41.14%), Postives = 104/158 (65.82%), Query Frame = 0
BLAST of Cucsat.G16789.T26 vs. ExPASy Swiss-Prot
Match: Q0AYV2 (5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) OX=335541 GN=mtaD PE=3 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 9.0e-26 Identity = 61/156 (39.10%), Postives = 102/156 (65.38%), Query Frame = 0
BLAST of Cucsat.G16789.T26 vs. ExPASy Swiss-Prot
Match: A5UMN6 (5'-deoxyadenosine deaminase OS=Methanobrevibacter smithii (strain ATCC 35061 / DSM 861 / OCM 144 / PS) OX=420247 GN=dadD PE=3 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 3.4e-25 Identity = 62/158 (39.24%), Postives = 101/158 (63.92%), Query Frame = 0
BLAST of Cucsat.G16789.T26 vs. ExPASy Swiss-Prot
Match: Q92342 (Uncharacterized protein C1F8.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC1F8.04c PE=3 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 4.5e-25 Identity = 65/167 (38.92%), Postives = 105/167 (62.87%), Query Frame = 0
BLAST of Cucsat.G16789.T26 vs. NCBI nr
Match: XP_004152121.1 (uncharacterized protein LOC101216449 isoform X2 [Cucumis sativus] >KGN53034.1 hypothetical protein Csa_015175 [Cucumis sativus]) HSP 1 Score: 346 bits (887), Expect = 1.82e-115 Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0
BLAST of Cucsat.G16789.T26 vs. NCBI nr
Match: XP_031740508.1 (uncharacterized protein LOC101216449 isoform X1 [Cucumis sativus]) HSP 1 Score: 346 bits (887), Expect = 5.90e-115 Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0
BLAST of Cucsat.G16789.T26 vs. NCBI nr
Match: XP_008454030.1 (PREDICTED: 5-methylthioadenosine/S-adenosylhomocysteine deaminase-like [Cucumis melo] >TYK17022.1 5-methylthioadenosine/S-adenosylhomocysteine deaminase-like [Cucumis melo var. makuwa]) HSP 1 Score: 340 bits (872), Expect = 3.38e-113 Identity = 170/174 (97.70%), Postives = 172/174 (98.85%), Query Frame = 0
BLAST of Cucsat.G16789.T26 vs. NCBI nr
Match: KAA0044562.1 (5-methylthioadenosine/S-adenosylhomocysteine deaminase-like [Cucumis melo var. makuwa]) HSP 1 Score: 340 bits (872), Expect = 3.38e-113 Identity = 170/174 (97.70%), Postives = 172/174 (98.85%), Query Frame = 0
BLAST of Cucsat.G16789.T26 vs. NCBI nr
Match: XP_038896079.1 (5-methylthioadenosine/S-adenosylhomocysteine deaminase-like isoform X1 [Benincasa hispida]) HSP 1 Score: 338 bits (867), Expect = 1.93e-112 Identity = 168/174 (96.55%), Postives = 173/174 (99.43%), Query Frame = 0
BLAST of Cucsat.G16789.T26 vs. ExPASy TrEMBL
Match: A0A0A0KW12 (Amidohydro-rel domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G011800 PE=4 SV=1) HSP 1 Score: 346 bits (887), Expect = 8.81e-116 Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0
BLAST of Cucsat.G16789.T26 vs. ExPASy TrEMBL
Match: A0A5D3CZP4 (5-methylthioadenosine/S-adenosylhomocysteine deaminase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001680 PE=4 SV=1) HSP 1 Score: 340 bits (872), Expect = 1.64e-113 Identity = 170/174 (97.70%), Postives = 172/174 (98.85%), Query Frame = 0
BLAST of Cucsat.G16789.T26 vs. ExPASy TrEMBL
Match: A0A5A7TMN5 (5-methylthioadenosine/S-adenosylhomocysteine deaminase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003110 PE=4 SV=1) HSP 1 Score: 340 bits (872), Expect = 1.64e-113 Identity = 170/174 (97.70%), Postives = 172/174 (98.85%), Query Frame = 0
BLAST of Cucsat.G16789.T26 vs. ExPASy TrEMBL
Match: A0A1S3BX59 (5-methylthioadenosine/S-adenosylhomocysteine deaminase-like OS=Cucumis melo OX=3656 GN=LOC103494577 PE=4 SV=1) HSP 1 Score: 340 bits (872), Expect = 1.64e-113 Identity = 170/174 (97.70%), Postives = 172/174 (98.85%), Query Frame = 0
BLAST of Cucsat.G16789.T26 vs. ExPASy TrEMBL
Match: A0A6J1CV72 (uncharacterized protein LOC111014672 OS=Momordica charantia OX=3673 GN=LOC111014672 PE=4 SV=1) HSP 1 Score: 332 bits (850), Expect = 2.35e-110 Identity = 162/174 (93.10%), Postives = 173/174 (99.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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