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Cucsat.G16772.T9 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AATCTCCATCTGGTTGTTATTTGGTGAGTTGGTAAAATCAATCTCTAGGTTTTCTTTTCATTTCATTTGTTTTTAGTTATTCGGTTATTTTATTCCCGTGGTTGATTCATTGATTCAGCTTCTTCTAGATCTTGTACGACTTTTCTCAATTTGCTACGCGAACCCTAGGATTTTTGTCGATTGGATTTCTTTTGCTTGTTTGCTTATTTGATCGACTAGTTATTTTGTTTTTGTTCTTTTTTTTCTCATTTTGAACTTTTTTGCAGTGAAGGGAGGGAGGTGAATTAATAGTTTTCGGCAGATATGGTTTCCTTCGAAATGAATGACCGCAAGAGTGAGTTACTTTTTCTCTTATGGATATGTTGTTTTTTCCGGCAGATATGAATGACCGCGACGATGTTAATCTAGTATTTTTGCTTCTCGTCGTTGCCTGGATTTTTGGAACTGGAATGTGCTGATTGCATTATGGTCATCGACTCATTCACTTAGTTTAGTGCCTAGTTATGAGCCCTAGGTTTCTTAGAGATTCTGTGCGGTGTATTTTGTTGAGTATTGTACGTCTACTTAGCAATGGTCGTGCATAAAGGAGGGAAGTTATGTGATTTTTTCTAATAATTTTGTTTCTTATATGAATTGCTTTTGTAATGGCATTAATGATGAATTTGCAAATGAGCAGAGATTGGGCTAGGACTTACAGGATTTGGGGTATTTTTCTCATTCCTCGGAATTGTCTTCTTTTTTGACAAGGGATTACTTGCTATGGGAAATGTAAGTGTAGAATTTATATTTTTCTCAACCCAAATAAAAACAATTGCAAATCTTGTTTCATTCTAATGTAACCTCTTAACACCACATCTCTTCTTTGGTTCACCGAATCAGATCCTGTTCTTCTCAGGAGTAACTCTCACCATTGGACTAAAGTCAACCATGCAATTCTTTATGAAACGTCAAAATTTTAAGGTTGGACATCCTAGAGAGACCTTTCCCCGTATGCTTTTTCTTTGGTGTGCATGCTTTTTGTTTGACGGTGTACTTTTCATCATTTATGCAGGGAACAATTTCTTTTGGTTTAGGGTTCTTTTTTGTTATCATAGGATGGCCAATCTTTGGCATGATATTGGAAGCATATGGTTTCGTTGTCCTTTTCAGGTTTGTTGGATATAGATGGCCATTTGCCAGAATTTGGATTTGTATGTACATATCTTTTTACTCTTTGGCCATGCTGAATGTTGATAAATTATGCTGTGCAGTGGCTTCTGGCCAACATTGGCAGTCTTTCTTCAGAAAATTCCTGTTCTTGGATGGTTATTTCAGCAACCATATGTCAGATCGGTTAGTTTGTGCTTTTTAATTAATAAATTGTAATCCGTTGTTTGAATAATTTTTAAATATATGGATATTGTTTCCTTCATGGAGCCTTTTTTCTATAACAAAATTAATCGTTTTATCTGGAGTTCCATTATAACATATTGTAAGAAAAGGGGCTGTAAGAAATTTGCACCAATTGTCGTCTTTTCTTCCATCTTCTTTTTAATTGTTGGGAAGATGTAGTGGAGAAATGATGACCAAAGCAATCTCTTATATACTGTAACGATAACCCCCCCTAATGCAATAGGTATATCAAGGAGGGAGTAAAACAATGATTAGAAGGGGAGGGGAATGTTAACTTAAAAGATTTCTGGTTTCTTGCAACAAGCCGCTTTAGCTAGTATGAGGTAGAGAATGAGTGAGGAAGATGATAGAACCCGGATATATTAATATAAAAGATAACCAAATTACATGATAAACCAAGTGACTCGAGGTTCTTGGACCCTCACTTCTTGAGATCTCACACTCTGAGATCTCTCATGCCCTAGTTCATATACCAAACATTGCTTACCTTCTTCCCTCCCCTCCCCTCCCCTCTATTTATAACCAAATTCCCTAACATCCTCCCTAACTAACTACTAATGGACCTCTAATATTTATCTAGTACCAATCCTAAAAGAAGAGTAGGGGAATATAAGTGGTTAAAAGAGTGGGGGGTAGGGGGAACTTTCAGGTGATATGATGTAAGGTGGGGGTATTAGGTTCAATAAATCTAGTGTAGCAAGAGCATTGTAGTATTTCAGAATACCTAAATTTGTATCTTTGGGTTTTCATTATTGGGACCTTTGGCCTCTAGTTAAAAAAATCTTCACTTGCTCAACATTCGATTTCTCATCCACCAACCATTTTGATCAGATCTCTCATGTTTGTGTTTTCCTCCATTTGAATTTGTTTGTCTCTTTTTGCACATGGCATTGCCATCCAAACCAAAGTATGCCATCTAACCTAACTCGAACACATAGGGTTGGGTTGGATTTGGTTCCTTCTCTAACTGGATTGATCAGGTGGGGAACTAACCTACTCAAAAGCGCAGGTTGGTCTAAAAAAACTTTAACCAAACCGACCCAACTCAACTACATCCCTATCATTTGCAACTGAACGCAACATCTTATGATTCAGCTTTTTTGTTTTTGATGAATTAAACAGCTCTCATCGGGAAAGAATGAAAGAATACAAGGGCATACAAATAAACCAGCCACAAAAACACCCCAACTAATAGAAGGGGACCAACTAAGTAGAATGTCGCCATTAGAGTAATTACAAAAGAGATTCAAAATTGAAGCCCAATGGGAAGCATGAAATCTAGCTAAAGACCAAATCTCACTATGCTCCCTCTTCCCAAAGAAATGATTCAGATTGGGTCAGTTGAATCATTTCTTTATGACCCTAGCCAAGGAAATCTGTAGGATCATAAACTTCTGGTGGATGGTTAATATGACTCAAACTTTTTCTCTCTGAATATTGTCATGCCCTTCACAAACAACTCATGAAGGGCAATGTCTCATGGAATGAGGTGCTGAGATGCTTTCCAGAAGCTGATGACAACCGTGATCAGTGTTTCTGTTTTGGCACATCCGAACATGGTAGAGCCTTTAATCATTGATACAGATGCCCTGGATGTGAGCAGTGAGATAATGTTTATGCATGATCGTAGGTCCGTGGCTTTCTTCAGTCTCCTATCCTTCCTGATATATAGGCACAAGGCAATTGTTGAGTGCAATATAGTAGACATAGTGTTGATTATGACTAAATGGGGACAATATTTGGTGGGGTGGAGATTTGTTTTCAAATGGAGCTCAAAAGTTCCAAAAGAGCATGGATTGGTCGGGTGGTATTAACCTAATGCGAAGAGGATAAGATTGGGGCATTGTGAGAAGTAGATATAAGGATTCTCAATTCAAGATATCTAGTGGGATTGGCTTACTTTCATAACACCTTTATAGTTATGCTTTTATTTATTTACTTATTTTAAATTTTGGGCATGTTTTGTATATCATAGCATTAGTCTCTTTAACCATCCTGGTGCAATTCATAGTTGGCATTCGTATTTAGCTTCATGGACTAGTTATTCTCCATTAAATCAGTTAGCATTGTTTGAGTTTTTATTCAATTTCCGCATACACATTGTAAAATTTTCTGGATGGCAGATTTATATGTTTTTCTTTTTTAATGTTGCAGTTCTTCGACAAATATCGGGGTAGACGTGTACCTGTTTGAGCCAGGGATGTTATAAATTGGTTTGTAGGTGAACTTGTAAGTTGTAAACCACTCTTGCTTGGAAGACCCAGTCTTTGTTCAGATGGGGAGAGTAGAAGAAGCTTCGTTGGCAGTTGATAATGATGAGAATGGGATTGCTTTGTTATCCAAAAAAAAGAAAATAAAGGAAAAAGAAAAGAAAGAAAGAACTAACAAACAAACACAAACTCTTTTTTCTTTTCTTTTCTTTTTGGTTTTTGATAATTTCATTTGTGTAAAAAGTACTCGTGACGTGTAGCTGAAAATTCTATAGTTGTTAATTTTCAAAATTCTTAGATGCCATTCTTTGTATTTTAGTTGGATGAGGAAAGGATATGTGGTGAGACTTCTATAGCTTACTAAGGTGGATTTCTATATAATACTAAAAAAAATATTGATGTATGTATATATAATTATGTGTAACAGTAGAGCCTGTCTTGGTGGTTGAAAGTATTAAAATTACTTTTGTGATTTTCAAAATCAAGTGAAATGATTTTTAGTGATTAAACGCAGTTTATTTATAACCTCTGATGACAACTTCTAAAAATATTGACAAATCCAAAACTCAAATTGTTTACCAAATAGACTCCAAAATGATTTGCATTTTTATATTATTGGTTTAATGTTTAATGTGGATCTCTAAAAAGAAATTTGGTTTGATGGTTCAAGTCTTAATTCCATTCCATATGATGTTCAAAGAGAACAA ATGGTTTCCTTCGAAATGAATGACCGCAAGAAGATTGGGCTAGGACTTACAGGATTTGGGGTATTTTTCTCATTCCTCGGAATTGTCTTCTTTTTTGACAAGGGATTACTTGCTATGGGAAATATCCTGTTCTTCTCAGGAGTAACTCTCACCATTGGACTAAAGTCAACCATGCAATTCTTTATGAAACGTCAAAATTTTAAGGGAACAATTTCTTTTGGTTTAGGGTTCTTTTTTGTTATCATAGGATGGCCAATCTTTGGCATGATATTGGAAGCATATGGTTTCGTTGTCCTTTTCAGTGGCTTCTGGCCAACATTGGCAGTCTTTCTTCAGAAAATTCCTGTTCTTGGATGGTTATTTCAGCAACCATATGTCAGATCGTTCTTCGACAAATATCGGGGTAGACGTGTACCTGTTTGA MVSFEMNDRKKIGLGLTGFGVFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQFFMKRQNFKGTISFGLGFFFVIIGWPIFGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWLFQQPYVRSFFDKYRGRRVPV Homology
BLAST of Cucsat.G16772.T9 vs. ExPASy Swiss-Prot
Match: Q6NMM1 (Vesicle transport protein GOT1 OS=Arabidopsis thaliana OX=3702 GN=GOT1 PE=1 SV=1) HSP 1 Score: 232.6 bits (592), Expect = 2.6e-60 Identity = 109/140 (77.86%), Postives = 125/140 (89.29%), Query Frame = 0
BLAST of Cucsat.G16772.T9 vs. ExPASy Swiss-Prot
Match: Q9CR60 (Vesicle transport protein GOT1B OS=Mus musculus OX=10090 GN=Golt1b PE=1 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 5.2e-32 Identity = 68/127 (53.54%), Postives = 90/127 (70.87%), Query Frame = 0
BLAST of Cucsat.G16772.T9 vs. ExPASy Swiss-Prot
Match: Q2YDE3 (Vesicle transport protein GOT1B OS=Bos taurus OX=9913 GN=GOLT1B PE=2 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 8.9e-32 Identity = 67/127 (52.76%), Postives = 90/127 (70.87%), Query Frame = 0
BLAST of Cucsat.G16772.T9 vs. ExPASy Swiss-Prot
Match: Q9Y3E0 (Vesicle transport protein GOT1B OS=Homo sapiens OX=9606 GN=GOLT1B PE=1 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 8.9e-32 Identity = 67/127 (52.76%), Postives = 90/127 (70.87%), Query Frame = 0
BLAST of Cucsat.G16772.T9 vs. ExPASy Swiss-Prot
Match: Q20263 (Probable Golgi transport protein 1 OS=Caenorhabditis elegans OX=6239 GN=eas-1 PE=3 SV=2) HSP 1 Score: 117.5 bits (293), Expect = 1.2e-25 Identity = 59/132 (44.70%), Postives = 87/132 (65.91%), Query Frame = 0
BLAST of Cucsat.G16772.T9 vs. NCBI nr
Match: XP_004152095.1 (vesicle transport protein GOT1 [Cucumis sativus] >XP_031740250.1 vesicle transport protein GOT1 [Cucumis sativus] >KGN53100.1 hypothetical protein Csa_014796 [Cucumis sativus]) HSP 1 Score: 281 bits (719), Expect = 1.81e-95 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0
BLAST of Cucsat.G16772.T9 vs. NCBI nr
Match: XP_008453962.1 (PREDICTED: vesicle transport protein GOT1B-like [Cucumis melo] >XP_008453963.1 PREDICTED: vesicle transport protein GOT1B-like [Cucumis melo] >XP_016901587.1 PREDICTED: vesicle transport protein GOT1B-like [Cucumis melo]) HSP 1 Score: 281 bits (718), Expect = 2.57e-95 Identity = 139/140 (99.29%), Postives = 140/140 (100.00%), Query Frame = 0
BLAST of Cucsat.G16772.T9 vs. NCBI nr
Match: XP_038879388.1 (vesicle transport protein GOT1-like [Benincasa hispida] >XP_038879468.1 vesicle transport protein GOT1-like [Benincasa hispida] >XP_038879546.1 vesicle transport protein GOT1-like [Benincasa hispida]) HSP 1 Score: 281 bits (718), Expect = 2.57e-95 Identity = 139/140 (99.29%), Postives = 140/140 (100.00%), Query Frame = 0
BLAST of Cucsat.G16772.T9 vs. NCBI nr
Match: XP_022932598.1 (vesicle transport protein GOT1-like [Cucurbita moschata] >XP_022932599.1 vesicle transport protein GOT1-like [Cucurbita moschata] >XP_022972315.1 vesicle transport protein GOT1-like [Cucurbita maxima] >XP_022972317.1 vesicle transport protein GOT1-like [Cucurbita maxima] >XP_023539038.1 vesicle transport protein GOT1-like [Cucurbita pepo subsp. pepo] >XP_023539039.1 vesicle transport protein GOT1-like [Cucurbita pepo subsp. pepo] >KAG6597641.1 Vesicle transport protein GOT1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 278 bits (712), Expect = 2.12e-94 Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 0
BLAST of Cucsat.G16772.T9 vs. NCBI nr
Match: XP_042985952.1 (vesicle transport protein GOT1-like [Carya illinoinensis] >XP_042985961.1 vesicle transport protein GOT1-like [Carya illinoinensis] >KAG2726083.1 hypothetical protein I3760_01G095600 [Carya illinoinensis] >KAG2726084.1 hypothetical protein I3760_01G095600 [Carya illinoinensis] >KAG6667463.1 hypothetical protein CIPAW_01G102800 [Carya illinoinensis] >KAG6667464.1 hypothetical protein CIPAW_01G102800 [Carya illinoinensis] >KAG6730823.1 hypothetical protein I3842_01G098900 [Carya illinoinensis]) HSP 1 Score: 269 bits (688), Expect = 9.69e-91 Identity = 131/140 (93.57%), Postives = 136/140 (97.14%), Query Frame = 0
BLAST of Cucsat.G16772.T9 vs. ExPASy TrEMBL
Match: A0A0A0KU00 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G016390 PE=4 SV=1) HSP 1 Score: 281 bits (719), Expect = 8.76e-96 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0
BLAST of Cucsat.G16772.T9 vs. ExPASy TrEMBL
Match: A0A1S3BYQ5 (vesicle transport protein GOT1B-like OS=Cucumis melo OX=3656 GN=LOC103494525 PE=4 SV=1) HSP 1 Score: 281 bits (718), Expect = 1.25e-95 Identity = 139/140 (99.29%), Postives = 140/140 (100.00%), Query Frame = 0
BLAST of Cucsat.G16772.T9 vs. ExPASy TrEMBL
Match: A0A6J1I889 (vesicle transport protein GOT1-like OS=Cucurbita maxima OX=3661 GN=LOC111470890 PE=4 SV=1) HSP 1 Score: 278 bits (712), Expect = 1.02e-94 Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 0
BLAST of Cucsat.G16772.T9 vs. ExPASy TrEMBL
Match: A0A6J1F266 (vesicle transport protein GOT1-like OS=Cucurbita moschata OX=3662 GN=LOC111439110 PE=4 SV=1) HSP 1 Score: 278 bits (712), Expect = 1.02e-94 Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 0
BLAST of Cucsat.G16772.T9 vs. ExPASy TrEMBL
Match: A0A061FRI8 (Got1/Sft2-like vescicle transport protein family isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_036309 PE=4 SV=1) HSP 1 Score: 269 bits (688), Expect = 4.69e-91 Identity = 128/140 (91.43%), Postives = 138/140 (98.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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