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Cucsat.G16772.T5 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CCCCATCTCTGCACGCGAACCACGCCGCCCATCTCTTCCCTCAATCTGCTTCAAGGTTTGTTCCTTATTTTATTTTTCTTTTGAGATTCTGTTGCGTTTGGGTTGCTGAGATCACAATTGAATGTTCGTATTTGTATTATTAATTAATCTCCATCTGGTTGTTATTTGGTGAGTTGGTAAAATCAATCTCTAGGTTTTCTTTTCATTTCATTTGTTTTTAGTTATTCGGTTATTTTATTCCCGTGGTTGATTCATTGATTCAGCTTCTTCTAGATCTTGTACGACTTTTCTCAATTTGCTACGCGAACCCTAGGATTTTTGTCGATTGGATTTCTTTTGCTTGTTTGCTTATTTGATCGACTAGTTATTTTGTTTTTGTTCTTTTTTTTCTCATTTTGAACTTTTTTGCAGTGAAGGGAGGGAGGTGAATTAATAGTTTTCGGCAGATATGGTTTCCTTCGAAATGAATGACCGCAAGAGTGAGTTACTTTTTCTCTTATGGATATGTTGTTTTTTCCGGCAGATATGAATGACCGCGACGATGTTAATCTAGTATTTTTGCTTCTCGTCGTTGCCTGGATTTTTGGAACTGGAATGTGCTGATTGCATTATGGTCATCGACTCATTCACTTAGTTTAGTGCCTAGTTATGAGCCCTAGGTTTCTTAGAGATTCTGTGCGGTGTATTTTGTTGAGTATTGTACGTCTACTTAGCAATGGTCGTGCATAAAGGAGGGAAGTTATGTGATTTTTTCTAATAATTTTGTTTCTTATATGAATTGCTTTTGTAATGGCATTAATGATGAATTTGCAAATGAGCAGAGATTGGGCTAGGACTTACAGGATTTGGGGTATTTTTCTCATTCCTCGGAATTGTCTTCTTTTTTGACAAGGGATTACTTGCTATGGGAAATGTAAGTGTAGAATTTATATTTTTCTCAACCCAAATAAAAACAATTGCAAATCTTGTTTCATTCTAATGTAACCTCTTAACACCACATCTCTTCTTTGGTTCACCGAATCAGATCCTGTTCTTCTCAGGAGTAACTCTCACCATTGGACTAAAGTCAACCATGCAATTCTTTATGAAACGTCAAAATTTTAAGGTTGGACATCCTAGAGAGACCTTTCCCCGTATGCTTTTTCTTTGGTGTGCATGCTTTTTGTTTGACGGTGTACTTTTCATCATTTATGCAGGGAACAATTTCTTTTGGTTTAGGGTTCTTTTTTGTTATCATAGGATGGCCAATCTTTGGCATGATATTGGAAGCATATGGTTTCGTTGTCCTTTTCAGGTTTGTTGGATATAGATGGCCATTTGCCAGAATTTGGATTTGTATGTACATATCTTTTTACTCTTTGGCCATGCTGAATGTTGATAAATTATGCTGTGCAGTGGCTTCTGGCCAACATTGGCAGTCTTTCTTCAGAAAATTCCTGTTCTTGGATGGTTATTTCAGCAACCATATGTCAGATCGGTTAGTTTGTGCTTTTTAATTAATAAATTGTAATCCGTTGTTTGAATAATTTTTAAATATATGGATATTGTTTCCTTCATGGAGCCTTTTTTCTATAACAAAATTAATCGTTTTATCTGGAGTTCCATTATAACATATTGTAAGAAAAGGGGCTGTAAGAAATTTGCACCAATTGTCGTCTTTTCTTCCATCTTCTTTTTAATTGTTGGGAAGATGTAGTGGAGAAATGATGACCAAAGCAATCTCTTATATACTGTAACGATAACCCCCCCTAATGCAATAGGTATATCAAGGAGGGAGTAAAACAATGATTAGAAGGGGAGGGGAATGTTAACTTAAAAGATTTCTGGTTTCTTGCAACAAGCCGCTTTAGCTAGTATGAGGTAGAGAATGAGTGAGGAAGATGATAGAACCCGGATATATTAATATAAAAGATAACCAAATTACATGATAAACCAAGTGACTCGAGGTTCTTGGACCCTCACTTCTTGAGATCTCACACTCTGAGATCTCTCATGCCCTAGTTCATATACCAAACATTGCTTACCTTCTTCCCTCCCCTCCCCTCCCCTCTATTTATAACCAAATTCCCTAACATCCTCCCTAACTAACTACTAATGGACCTCTAATATTTATCTAGTACCAATCCTAAAAGAAGAGTAGGGGAATATAAGTGGTTAAAAGAGTGGGGGGTAGGGGGAACTTTCAGGTGATATGATGTAAGGTGGGGGTATTAGGTTCAATAAATCTAGTGTAGCAAGAGCATTGTAGTATTTCAGAATACCTAAATTTGTATCTTTGGGTTTTCATTATTGGGACCTTTGGCCTCTAGTTAAAAAAATCTTCACTTGCTCAACATTCGATTTCTCATCCACCAACCATTTTGATCAGATCTCTCATGTTTGTGTTTTCCTCCATTTGAATTTGTTTGTCTCTTTTTGCACATGGCATTGCCATCCAAACCAAAGTATGCCATCTAACCTAACTCGAACACATAGGGTTGGGTTGGATTTGGTTCCTTCTCTAACTGGATTGATCAGGTGGGGAACTAACCTACTCAAAAGCGCAGGTTGGTCTAAAAAAACTTTAACCAAACCGACCCAACTCAACTACATCCCTATCATTTGCAACTGAACGCAACATCTTATGATTCAGCTTTTTTGTTTTTGATGAATTAAACAGCTCTCATCGGGAAAGAATGAAAGAATACAAGGGCATACAAATAAACCAGCCACAAAAACACCCCAACTAATAGAAGGGGACCAACTAAGTAGAATGTCGCCATTAGAGTAATTACAAAAGAGATTCAAAATTGAAGCCCAATGGGAAGCATGAAATCTAGCTAAAGACCAAATCTCACTATGCTCCCTCTTCCCAAAGAAATGATTCAGATTGGGTCAGTTGAATCATTTCTTTATGACCCTAGCCAAGGAAATCTGTAGGATCATAAACTTCTGGTGGATGGTTAATATGACTCAAACTTTTTCTCTCTGAATATTGTCATGCCCTTCACAAACAACTCATGAAGGGCAATGTCTCATGGAATGAGGTGCTGAGATGCTTTCCAGAAGCTGATGACAACCGTGATCAGTGTTTCTGTTTTGGCACATCCGAACATGGTAGAGCCTTTAATCATTGATACAGATGCCCTGGATGTGAGCAGTGAGATAATGTTTATGCATGATCGTAGGTCCGTGGCTTTCTTCAGTCTCCTATCCTTCCTGATATATAGGCACAAGGCAATTGTTGAGTGCAATATAGTAGACATAGTGTTGATTATGACTAAATGGGGACAATATTTGGTGGGGTGGAGATTTGTTTTCAAATGGAGCTCAAAAGTTCCAAAAGAGCATGGATTGGTCGGGTGGTATTAACCTAATGCGAAGAGGATAAGATTGGGGCATTGTGAGAAGTAGATATAAGGATTCTCAATTCAAGATATCTAGTGGGATTGGCTTACTTTCATAACACCTTTATAGTTATGCTTTTATTTATTTACTTATTTTAAATTTTGGGCATGTTTTGTATATCATAGCATTAGTCTCTTTAACCATCCTGGTGCAATTCATAGTTGGCATTCGTATTTAGCTTCATGGACTAGTTATTCTCCATTAAATCAGTTAGCATTGTTTGAGTTTTTATTCAATTTCCGCATACACATTGTAAAATTTTCTGGATGGCAGATTTATATGTTTTTCTTTTTTAATGTTGCAGTTCTTCGACAAATATCGGGGTAGACGTGTACCTGTTTGAGCCAGGGATGTTATAAATTGGTTTGTAGGTGAACTTGTAAGTTGTAAACCACTCTTGCTTGGAAGACCCAGTCTTTGTTCAGATGGGGAGAGTAGAAGAAGCTTCGTTGGCAGTTGATAATGATGAGAATGGGATTGCTTTGTTATCCAAAAAAAAGAAAATAAAGGAAAAAGAAAAGAAAGAAAGAACTAACAAACAAACACAAACTCTTTTTTCTTTTCTTTTCTTTTTGGTTTTTGATAATTTCATTTGTGTAAAAAGTACTCGTGACGTGTAGCTGAAAATTCTATAGTTGTTAATTTTCAAAATTCTTAGATGCCATTCTTTGTATTTTAGTTGGATGAGGAAAGGATATGTGGTGAGACTTCTATAGCTTACTAAGGTGGATTTCTATATAATACTAAAAAAAATATTGATGTATGTATATATAATTATGTGTAACAGTAGAGCCTGTCTTGGTGGTTGAAAGTATTAAAATTACTTTTGTGATTTTCAAAATCAAGTGAAATGATTTTTAGTGATTAAACGCAGTTTATTTATAACCTCTGATGACAACTTCTAAAAATATTGACAAATCCAAAACTCAAATTGTTTACCAAATAGACTCCAAAATGATTTGCATTTTTATATTATTGGTTTAATGTT ATGGGAAATATCCTGTTCTTCTCAGGAGTAACTCTCACCATTGGACTAAAGTCAACCATGCAATTCTTTATGAAACGTCAAAATTTTAAGGGAACAATTTCTTTTGGTTTAGGGTTCTTTTTTGTTATCATAGGATGGCCAATCTTTGGCATGATATTGGAAGCATATGGTTTCGTTGTCCTTTTCAGTGGCTTCTGGCCAACATTGGCAGTCTTTCTTCAGAAAATTCCTGTTCTTGGATGGTTATTTCAGCAACCATATGTCAGATCGTTCTTCGACAAATATCGGGGTAGACGTGTACCTGTTTGA MGNILFFSGVTLTIGLKSTMQFFMKRQNFKGTISFGLGFFFVIIGWPIFGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWLFQQPYVRSFFDKYRGRRVPV Homology
BLAST of Cucsat.G16772.T5 vs. ExPASy Swiss-Prot
Match: Q6NMM1 (Vesicle transport protein GOT1 OS=Arabidopsis thaliana OX=3702 GN=GOT1 PE=1 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 2.4e-42 Identity = 79/102 (77.45%), Postives = 91/102 (89.22%), Query Frame = 0
BLAST of Cucsat.G16772.T5 vs. ExPASy Swiss-Prot
Match: Q9CR60 (Vesicle transport protein GOT1B OS=Mus musculus OX=10090 GN=Golt1b PE=1 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 8.2e-19 Identity = 46/94 (48.94%), Postives = 63/94 (67.02%), Query Frame = 0
BLAST of Cucsat.G16772.T5 vs. ExPASy Swiss-Prot
Match: Q2YDE3 (Vesicle transport protein GOT1B OS=Bos taurus OX=9913 GN=GOLT1B PE=2 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 1.4e-18 Identity = 45/94 (47.87%), Postives = 63/94 (67.02%), Query Frame = 0
BLAST of Cucsat.G16772.T5 vs. ExPASy Swiss-Prot
Match: Q9Y3E0 (Vesicle transport protein GOT1B OS=Homo sapiens OX=9606 GN=GOLT1B PE=1 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 1.4e-18 Identity = 45/94 (47.87%), Postives = 63/94 (67.02%), Query Frame = 0
BLAST of Cucsat.G16772.T5 vs. ExPASy Swiss-Prot
Match: Q9DCQ3 (Vesicle transport protein GOT1A OS=Mus musculus OX=10090 GN=Golt1a PE=2 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 2.7e-14 Identity = 42/96 (43.75%), Postives = 59/96 (61.46%), Query Frame = 0
BLAST of Cucsat.G16772.T5 vs. NCBI nr
Match: XP_004152095.1 (vesicle transport protein GOT1 [Cucumis sativus] >XP_031740250.1 vesicle transport protein GOT1 [Cucumis sativus] >KGN53100.1 hypothetical protein Csa_014796 [Cucumis sativus]) HSP 1 Score: 206 bits (525), Expect = 1.45e-66 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0
BLAST of Cucsat.G16772.T5 vs. NCBI nr
Match: XP_038879388.1 (vesicle transport protein GOT1-like [Benincasa hispida] >XP_038879468.1 vesicle transport protein GOT1-like [Benincasa hispida] >XP_038879546.1 vesicle transport protein GOT1-like [Benincasa hispida]) HSP 1 Score: 206 bits (525), Expect = 1.45e-66 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0
BLAST of Cucsat.G16772.T5 vs. NCBI nr
Match: XP_008453962.1 (PREDICTED: vesicle transport protein GOT1B-like [Cucumis melo] >XP_008453963.1 PREDICTED: vesicle transport protein GOT1B-like [Cucumis melo] >XP_016901587.1 PREDICTED: vesicle transport protein GOT1B-like [Cucumis melo]) HSP 1 Score: 206 bits (524), Expect = 2.06e-66 Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 0
BLAST of Cucsat.G16772.T5 vs. NCBI nr
Match: XP_022932598.1 (vesicle transport protein GOT1-like [Cucurbita moschata] >XP_022932599.1 vesicle transport protein GOT1-like [Cucurbita moschata] >XP_022972315.1 vesicle transport protein GOT1-like [Cucurbita maxima] >XP_022972317.1 vesicle transport protein GOT1-like [Cucurbita maxima] >XP_023539038.1 vesicle transport protein GOT1-like [Cucurbita pepo subsp. pepo] >XP_023539039.1 vesicle transport protein GOT1-like [Cucurbita pepo subsp. pepo] >KAG6597641.1 Vesicle transport protein GOT1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 204 bits (519), Expect = 1.19e-65 Identity = 101/102 (99.02%), Postives = 101/102 (99.02%), Query Frame = 0
BLAST of Cucsat.G16772.T5 vs. NCBI nr
Match: KAG6582059.1 (Vesicle transport protein GOT1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 196 bits (499), Expect = 1.14e-62 Identity = 95/102 (93.14%), Postives = 99/102 (97.06%), Query Frame = 0
BLAST of Cucsat.G16772.T5 vs. ExPASy TrEMBL
Match: A0A0A0KU00 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G016390 PE=4 SV=1) HSP 1 Score: 206 bits (525), Expect = 7.03e-67 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0
BLAST of Cucsat.G16772.T5 vs. ExPASy TrEMBL
Match: A0A1S3BYQ5 (vesicle transport protein GOT1B-like OS=Cucumis melo OX=3656 GN=LOC103494525 PE=4 SV=1) HSP 1 Score: 206 bits (524), Expect = 9.99e-67 Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 0
BLAST of Cucsat.G16772.T5 vs. ExPASy TrEMBL
Match: A0A6J1I889 (vesicle transport protein GOT1-like OS=Cucurbita maxima OX=3661 GN=LOC111470890 PE=4 SV=1) HSP 1 Score: 204 bits (519), Expect = 5.78e-66 Identity = 101/102 (99.02%), Postives = 101/102 (99.02%), Query Frame = 0
BLAST of Cucsat.G16772.T5 vs. ExPASy TrEMBL
Match: A0A6J1F266 (vesicle transport protein GOT1-like OS=Cucurbita moschata OX=3662 GN=LOC111439110 PE=4 SV=1) HSP 1 Score: 204 bits (519), Expect = 5.78e-66 Identity = 101/102 (99.02%), Postives = 101/102 (99.02%), Query Frame = 0
BLAST of Cucsat.G16772.T5 vs. ExPASy TrEMBL
Match: A0A6J1IUV8 (vesicle transport protein GOT1-like OS=Cucurbita maxima OX=3661 GN=LOC111479511 PE=4 SV=1) HSP 1 Score: 196 bits (499), Expect = 6.47e-63 Identity = 95/102 (93.14%), Postives = 99/102 (97.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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