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Cucsat.G16772.T16 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATTGGTTAACAACCATCATTATTCATTCATTGTTCTTCCACTCTAAGTTACATTATATATATGTGTGTGAGTGTGTTATTTTTTAACGTATATAAGAGAGTACCGTTCCGAATTTTGGCAGTGGCACGTGCCTGCATTCCTCTCCTCCACATCACGCGAACCGCCGCCCACCAGCCGGTCACCTGCAATCCCAACGCCGCCCCATCTCTGCACGCGAACCACGCCGCCCATCTCTTCCCTCAATCTGCTTCAAGGTTTGTTCCTTATTTTATTTTTCTTTTGAGATTCTGTTGCGTTTGGGTTGCTGAGATCACAATTGAATGTTCGTATTTGTATTATTAATTAATCTCCATCTGGTTGTTATTTGGTGAGTTGGTAAAATCAATCTCTAGGTTTTCTTTTCATTTCATTTGTTTTTAGTTATTCGGTTATTTTATTCCCGTGGTTGATTCATTGATTCAGCTTCTTCTAGATCTTGTACGACTTTTCTCAATTTGCTACGCGAACCCTAGGATTTTTGTCGATTGGATTTCTTTTGCTTGTTTGCTTATTTGATCGACTAGTTATTTTGTTTTTGTTCTTTTTTTTCTCATTTTGAACTTTTTTGCAGTGAAGGGAGGGAGGTGAATTAATAGTTTTCGGCAGATATGGTTTCCTTCGAAATGAATGACCGCAAGAGTGAGTTACTTTTTCTCTTATGGATATGTTGTTTTTTCCGGCAGATATGAATGACCGCGACGATGTTAATCTAGTATTTTTGCTTCTCGTCGTTGCCTGGATTTTTGGAACTGGAATGTGCTGATTGCATTATGGTCATCGACTCATTCACTTAGTTTAGTGCCTAGTTATGAGCCCTAGGTTTCTTAGAGATTCTGTGCGGTGTATTTTGTTGAGTATTGTACGTCTACTTAGCAATGGTCGTGCATAAAGGAGGGAAGTTATGTGATTTTTTCTAATAATTTTGTTTCTTATATGAATTGCTTTTGTAATGGCATTAATGATGAATTTGCAAATGAGCAGAGATTGGGCTAGGACTTACAGGATTTGGGGTATTTTTCTCATTCCTCGGAATTGTCTTCTTTTTTGACAAGGGATTACTTGCTATGGGAAATGTAAGTGTAGAATTTATATTTTTCTCAACCCAAATAAAAACAATTGCAAATCTTGTTTCATTCTAATGTAACCTCTTAACACCACATCTCTTCTTTGGTTCACCGAATCAGATCCTGTTCTTCTCAGGAGTAACTCTCACCATTGGACTAAAGTCAACCATGCAATTCTTTATGAAACGTCAAAATTTTAAGGTTGGACATCCTAGAGAGACCTTTCCCCGTATGCTTTTTCTTTGGTGTGCATGCTTTTTGTTTGACGGTGTACTTTTCATCATTTATGCAGGGAACAATTTCTTTTGGTTTAGGGTTCTTTTTTGTTATCATAGGATGGCCAATCTTTGGCATGATATTGGAAGCATATGGTTTCGTTGTCCTTTTCAGGTTTGTTGGATATAGATGGCCATTTGCCAGAATTTGGATTTGTATGTACATATCTTTTTACTCTTTGGCCATGCTGAATGTTGATAAATTATGCTGTGCAGTGGCTTCTGGCCAACATTGGCAGTCTTTCTTCAGAAAATTCCTGTTCTTGGATGGTTATTTCAGCAACCATATGTCAGATCGGTTAGTTTGTGCTTTTTAATTAATAAATTGTAATCCGTTGTTTGAATAATTTTTAAATATATGGATATTGTTTCCTTCATGGAGCCTTTTTTCTATAACAAAATTAATCGTTTTATCTGGAGTTCCATTATAACATATTGTAAGAAAAGGGGCTGTAAGAAATTTGCACCAATTGTCGTCTTTTCTTCCATCTTCTTTTTAATTGTTGGGAAGATGTAGTGGAGAAATGATGACCAAAGCAATCTCTTATATACTGTAACGATAACCCCCCCTAATGCAATAGGTATATCAAGGAGGGAGTAAAACAATGATTAGAAGGGGAGGGGAATGTTAACTTAAAAGATTTCTGGTTTCTTGCAACAAGCCGCTTTAGCTAGTATGAGGTAGAGAATGAGTGAGGAAGATGATAGAACCCGGATATATTAATATAAAAGATAACCAAATTACATGATAAACCAAGTGACTCGAGGTTCTTGGACCCTCACTTCTTGAGATCTCACACTCTGAGATCTCTCATGCCCTAGTTCATATACCAAACATTGCTTACCTTCTTCCCTCCCCTCCCCTCCCCTCTATTTATAACCAAATTCCCTAACATCCTCCCTAACTAACTACTAATGGACCTCTAATATTTATCTAGTACCAATCCTAAAAGAAGAGTAGGGGAATATAAGTGGTTAAAAGAGTGGGGGGTAGGGGGAACTTTCAGGTGATATGATGTAAGGTGGGGGTATTAGGTTCAATAAATCTAGTGTAGCAAGAGCATTGTAGTATTTCAGAATACCTAAATTTGTATCTTTGGGTTTTCATTATTGGGACCTTTGGCCTCTAGTTAAAAAAATCTTCACTTGCTCAACATTCGATTTCTCATCCACCAACCATTTTGATCAGATCTCTCATGTTTGTGTTTTCCTCCATTTGAATTTGTTTGTCTCTTTTTGCACATGGCATTGCCATCCAAACCAAAGTATGCCATCTAACCTAACTCGAACACATAGGGTTGGGTTGGATTTGGTTCCTTCTCTAACTGGATTGATCAGGTGGGGAACTAACCTACTCAAAAGCGCAGGTTGGTCTAAAAAAACTTTAACCAAACCGACCCAACTCAACTACATCCCTATCATTTGCAACTGAACGCAACATCTTATGATTCAGCTTTTTTGTTTTTGATGAATTAAACAGCTCTCATCGGGAAAGAATGAAAGAATACAAGGGCATACAAATAAACCAGCCACAAAAACACCCCAACTAATAGAAGGGGACCAACTAAGTAGAATGTCGCCATTAGAGTAATTACAAAAGAGATTCAAAATTGAAGCCCAATGGGAAGCATGAAATCTAGCTAAAGACCAAATCTCACTATGCTCCCTCTTCCCAAAGAAATGATTCAGATTGGGTCAGTTGAATCATTTCTTTATGACCCTAGCCAAGGAAATCTGTAGGATCATAAACTTCTGGTGGATGGTTAATATGACTCAAACTTTTTCTCTCTGAATATTGTCATGCCCTTCACAAACAACTCATGAAGGGCAATGTCTCATGGAATGAGGTGCTGAGATGCTTTCCAGAAGCTGATGACAACCGTGATCAGTGTTTCTGTTTTGGCACATCCGAACATGGTAGAGCCTTTAATCATTGATACAGATGCCCTGGATGTGAGCAGTGAGATAATGTTTATGCATGATCGTAGGTCCGTGGCTTTCTTCAGTCTCCTATCCTTCCTGATATATAGGCACAAGGCAATTGTTGAGTGCAATATAGTAGACATAGTGTTGATTATGACTAAATGGGGACAATATTTGGTGGGGTGGAGATTTGTTTTCAAATGGAGCTCAAAAGTTCCAAAAGAGCATGGATTGGTCGGGTGGTATTAACCTAATGCGAAGAGGATAAGATTGGGGCATTGTGAGAAGTAGATATAAGGATTCTCAATTCAAGATATCTAGTGGGATTGGCTTACTTTCATAACACCTTTATAGTTATGCTTTTATTTATTTACTTATTTTAAATTTTGGGCATGTTTTGTATATCATAGCATTAGTCTCTTTAACCATCCTGGTGCAATTCATAGTTGGCATTCGTATTTAGCTTCATGGACTAGTTATTCTCCATTAAATCAGTTAGCATTGTTTGAGTTTTTATTCAATTTCCGCATACACATTGTAAAATTTTCTGGATGGCAGATTTATATGTTTTTCTTTTTTAATGTTGCAGTTCTTCGACAAATATCGGGGTAGACGTGTACCTGTTTGAGCCAGGGATGTTATAAATTGGTTTGTAGGTGAACTTGTAAGTTGTAAACCACTCTTGCTTGGAAGACCCAGTCTTTGTTCAGATGGGGAGAGTAGAAGAAGCTTCGTTGGCAGTTGATAATGATGAGAATGGGATTGCTTTGTTATCCAAAAAAAAGAAAATAAAGGAAAAAGAAAAGAAAGAAAGAACTAACAAACAAACACAAACTCTTTTTTCTTTTCTTTTCTTTTTGGTTTTTGATAATTTCATTTGTGTAAAAAGTACTCGTGACGTGTAGCTGAAAATTCTATAGTTGTTAATTTTCAAAATTCTTAGATGCCATTCTTTGTATTTTAGTTGGATGAGGAAAGGATATGTGGTGAGACTTCTATAGCTTACTAAGGTGGATTTCTATATAATACTAAAAAAAATATTGATGTATGTATATATAATTATGTGTAACAGTAGAGCCTGTCTTGGTGGTTGAAAGTATTAAAATTACTTTTGTGATTTTCAAAATCAAGTGAAATGATTTTTAGTGATTAAACGCAGTTTATTTATAACCTCTGATGACAACTTCTAAAAATATTGACAAATCCAAAACTCAAATTGTTTACCAAATAGACTCCAAAATGATTTGCATTTTTATATTATTGGTTTAATGTTTAATGTGGATCTCTAAAAAGAAATTTGGTTTGATGGTTCAAGTCTTAATTCCATTCCATATGATGTTCAAAGAGAACAACCATCATCCGTATACAAAACGTCATCTCACACAAATCAAAGTAAAAGAGAAAGAAGAAATGAAAACAAGAAAGCTCTTCTTCTAAGGAAGGCTTTTCCATAATCTAAAATGACCTATTTT ATGCAATTCTTTATGAAACGTCAAAATTTTAAGGTTGGACATCCTAGAGAGACCTTTCCCCGTATGCTTTTTCTTTGGTGTGCATGCTTTTTGTTTGACGGTGTACTTTTCATCATTTATGCAGGGAACAATTTCTTTTGGTTTAGGGTTCTTTTTTGTTATCATAGGATGGCCAATCTTTGGCATGATATTGGAAGCATATGGTTTCGTTGTCCTTTTCAGTGGCTTCTGGCCAACATTGGCAGTCTTTCTTCAGAAAATTCCTGTTCTTGGATGGTTATTTCAGCAACCATATGTCAGATCGGTTAG MQFFMKRQNFKVGHPRETFPRMLFLWCACFLFDGVLFIIYAGNNFFWFRVLFCYHRMANLWHDIGSIWFRCPFQWLLANIGSLSSENSCSWMVISATICQIG Homology
BLAST of Cucsat.G16772.T16 vs. NCBI nr
Match: MBA0874940.1 (hypothetical protein [Gossypium schwendimanii]) HSP 1 Score: 94.0 bits (232), Expect = 8.61e-23 Identity = 39/62 (62.90%), Postives = 47/62 (75.81%), Query Frame = 0
BLAST of Cucsat.G16772.T16 vs. NCBI nr
Match: KAA3486967.1 (vesicle transport protein GOT1B-like [Gossypium australe]) HSP 1 Score: 90.9 bits (224), Expect = 3.15e-21 Identity = 37/62 (59.68%), Postives = 47/62 (75.81%), Query Frame = 0
BLAST of Cucsat.G16772.T16 vs. NCBI nr
Match: EOY17141.1 (Got1/Sft2-like vescicle transport protein family isoform 4, partial [Theobroma cacao] >EOY17143.1 Got1/Sft2-like vescicle transport protein family isoform 4, partial [Theobroma cacao]) HSP 1 Score: 80.1 bits (196), Expect = 1.34e-16 Identity = 33/61 (54.10%), Postives = 43/61 (70.49%), Query Frame = 0
BLAST of Cucsat.G16772.T16 vs. NCBI nr
Match: CAN61450.1 (hypothetical protein VITISV_001469 [Vitis vinifera]) HSP 1 Score: 78.6 bits (192), Expect = 6.50e-16 Identity = 40/93 (43.01%), Postives = 53/93 (56.99%), Query Frame = 0
BLAST of Cucsat.G16772.T16 vs. NCBI nr
Match: KAA8515798.1 (hypothetical protein F0562_018591 [Nyssa sinensis]) HSP 1 Score: 75.5 bits (184), Expect = 2.52e-14 Identity = 33/62 (53.23%), Postives = 40/62 (64.52%), Query Frame = 0
BLAST of Cucsat.G16772.T16 vs. ExPASy TrEMBL
Match: A0A7J9MVC7 (Uncharacterized protein OS=Gossypium schwendimanii OX=34291 GN=Goshw_024231 PE=4 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 4.17e-23 Identity = 39/62 (62.90%), Postives = 47/62 (75.81%), Query Frame = 0
BLAST of Cucsat.G16772.T16 vs. ExPASy TrEMBL
Match: A0A5B6X239 (Vesicle transport protein GOT1B-like OS=Gossypium australe OX=47621 GN=EPI10_030825 PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 1.53e-21 Identity = 37/62 (59.68%), Postives = 47/62 (75.81%), Query Frame = 0
BLAST of Cucsat.G16772.T16 vs. ExPASy TrEMBL
Match: A0A061FJ99 (Got1/Sft2-like vescicle transport protein family isoform 4 (Fragment) OS=Theobroma cacao OX=3641 GN=TCM_036309 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 6.47e-17 Identity = 33/61 (54.10%), Postives = 43/61 (70.49%), Query Frame = 0
BLAST of Cucsat.G16772.T16 vs. ExPASy TrEMBL
Match: A5BK31 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_001469 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 3.15e-16 Identity = 40/93 (43.01%), Postives = 53/93 (56.99%), Query Frame = 0
BLAST of Cucsat.G16772.T16 vs. ExPASy TrEMBL
Match: A0A5J4ZE78 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_018591 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 1.22e-14 Identity = 33/62 (53.23%), Postives = 40/62 (64.52%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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