
Cucsat.G16310.T1 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTGAGAGTTTAAAAATATGTGACTAACTGAAACTTTGAAGTAATATATATTATGGGGAGAGGTAATTATTCTAGTTATAGATAATTTTTATCCCAACTCTAAATATTTATATGGGAGAGAATGAAAAGAAAGGGTAAAAATATAGATTATATATAGAGAGAGATGATGGGGGAGGAAATTAAAGTAGGTGAGAGAGTGAATAAGAGGGCATTAACTCTTAAGTATAGTGGAAGGAATAATGAAGAAGTGTGTGGGAGTTTGTTCATTGTTGGGTGCGGTGGCCGTTCTGTGTGTGGTGGCGGTGGTGGAAGGTGCAATTGAAGCCGTAGAGCTTCCCGGTGGTGTTTTCGGGCCGGAAAGTATAGCCTTTGACTGCCGTGGAGAAGGGCCCTACGCCAGTGTCTCCGATGGCAGAATCCTCAAGTGGAAAGGTCCTCACTTGGGTTGGACTCAATTTGCTCTTACCTCACCCAACAGGTATAATATTATATACCCAAACCTTTCACTTTTCTTTTCTTTTTTCCACTAAATTATAACAAATAATTTAAAATTTACACTATTATCCTCCCACTTTTATAAACATTTTTAAACTATTCTTTTGAAATTTTTAGGACTTCAAATGATGGGGCTTTGACCTAAACTAAAACGATGCGGTTGATTCGCATCTTTTTCAGTTTTTTTATTATATACAACACCAATTTATATCTCAACTTTCGTTCAAGTTTTGAATTTTTTTTATTCCAACCATGTTTTAGAAATGTTTATGGAAGTTTAACCATATTATTTCAACTTTTGAAATTATAGAGATATTATTTAATTAAAAAGTCAAAAAGTTTTTAAGAGTTTTTTTCTTCTTTAAATGATCATTCTTTAGATAAAAATAAAAAAAATAAAAAAATAAAATATGTGTTGTTAATCTCGATGTCAATAGTTTGAACTAGGCGTTGAACTAAAATAATGAAAATGACTAACCTACCATTGGATACCTATTTGGTTTATTTTTATTTAAGAATATATTGTTTGAAATAGTTATTCAACCAAAAAAAAATGGATGGGCAGACTTGTATGGTTGGAAAAAAAACTTTATAAAACATAAAAGTAAAAAAAAGTTATTGTGAATACCGGATGTGTTAAAAATATTTACACCATACACCAAAATTTAGATTTTTAAATCTATCAATAATAAAATTCTGAAATTTACTATATTTTATAAATATTTAAATTCATTAGATTAGGTTTAAAAATATTAAAAAAAGTTTTTAAATGACATTTATCTAAGAAGTTTTTTTCAAAAATAGAAAAATCTACAAACTATTTACATTCTACCTAACAAAACTATAAAAAAAAAAAAAAAAATTTTAGAAAGGGTAAATATTTGGTCAAATATTCTATTTTTACCCCACCTACCTGCTTTTCTTTACTTTCTACCAACAGATCAATGTAATAAACATTTTAATTATTTTGCAAACAATAAAAGGCTTATTTATTAATTTAAATATATTCATTTACTTTAATAATCTTTCATGGAGTTTTTACATCAATATCTAGCCAATATATTTGGCAAGACAAGAACACACCATTATTTAATTGTAGGCATTTTCCTTATTTACCCCTATCTATATTAATGGTTGGTATATCATATTAGAGCAGAGGCCAGAAGTTTGTGCATAAAGAGGAAAAAGCTTTCCCATTACAACTTTTTCTGACTTCTTATAAATTCACAGATCTTCCGATTTTAAATTATTAGGTACACACAATATATATCTTTTGTTATTTTGCAAATTTCAATCAGTTCCCACAAAGTTTCAATAATTGGTTTCTACGAGATTTGGTTAAAGCAAAAATAGAAAGCTGAAATATTTTGTGAGATCTTAAGTAAAATTAAATTTAAGGAACCAACTAAAACAAAATTCAAATTACAAGCAAGAATTTTAATGGAAAATATAAGATCAAAATGGTCAAATCATTGATGGAACTAAAAGCATCTAGTCAAACTTGTGAGTTTGAAAGCTTTTGAAAGACCAATTGGAAAAAAAAGGGCATTATAGGATTTGGAATCACTTTTAAAATCAATTACGGGGCTGACCTTACTATTTTATTAAGATTTTGACTTGGTTGATTTTTCTATTAGGAGATTCTTAATGTCGGATTTCATTTGTGTTCATCATTCTTTGATAAGATCCTAAAGTTTGTTATTTTTTGGATCAAATGTCGGCTCATTGACTTTTATGAACTTTGATATCATATAATTAGATATGATAATTGCAATAAGTAACGTAATAATTAAGAAGAGTTACAAATATAAAAAAATTCATAAGTGATTGACTCTATAACAGATAATCTGTCATAAATGGTCACTATGTTGCTGATAGATTTTTAATAGACTTGGGAGTTTATTTGATTGAAAATTATATTAAAATACTAATTTGAGCTTGATTGCTATATTTGCAACCATCTTGTTAGGTGAAACAAGATTTCATTTCAAAACCAATTCGACAATGAGAGAAACAATAATCCATCGAATCTGATTAAGATTTTGTGAGGTTTCTTAAGTTTTGAATAACATTATATTATATTGATAGTGGGATGTTGGAAGATAACATGATGCACGATAAAAGAAAATTATACACGCATGATGCAACATGTTGACCAGATTCTTCAACGGAATCATAGAAGAAGAAATTAAATTCAGAAACAAAAGTCTTAAAGATGAATGGGATGTTAGAAGGTAGAGAATGATATGGAGTGTTTTTTGTGTTGTTGTTTTCAAAAGGGAAGGGAAAGAATGCGATGGGCAGCCCCAAAGTGAGGCAGCATGTGGAAGGCCATTAGGGATCAAATTTCACCCTACAACTTGTGACCTTTACATTGCTGATGCTTATTTTGGCCTTCTGGCTGTAGGACCTAAGGGTGGCTTGGCTCGCCAGCTTGCCACTTCTGCTCAAGGCGTGCCACTTCGCTTCACTAATGCTCTTGATATTGATCCTCAAAATGGCATTGTTTATTTCACCGATAGTAGCATCCTCTTTCAAAGAAGGTAATCTAATCTAATCTATGTCTCAAAATTTTAGTTTTTACTTTTGCTAACTTACTTACTATTTATCTTTGAATGGTATGATATTTTGGTATGTTTATAAATATTTTCAAAATTTTTATTATTTAAGATAAAATTTCATATATATTATGTGTGTATAATATATATATTTTGTACTCATTTAAACTTAAAAATATTTAATTTTATACTTTTTTTCTCTCCTTTCTTATTCCTTCTTTTCCTTGTCTCTGCCTCCTTCCAACGTTTTTCTTCATGGTTACCACTGTCACTAGCCATTGTCCACCACAATACTTCTTTTCTTCTCACTCTTTCCCTTTCTCTTTTTCCTTATTTTCTCCTCTACTGGGGCGAGAAAGAAAGAAGAGAGAAAATAGTGGTGGGATATAATAATGGTCATCGAATTGATGGCGGTGAACAACAAACAGTGGCAATGACAGCCATAAAGAAAGAAGGTTGAAGAAAGAGATGGATAAAAGAAGAAGAAAGAGGGAAAAGAAAGAAATATCATAAATTTAATTTTGGTTCCAAAAAAATGTGTTATACTTCATATTGATATATAAAGTGTTGAAATGTTTTTGTTTTAGTCAACTATATACATATATATATATGAGTTTATTGTTTATATGACAAATAATATTTTAATATTCCAAATAATAATTAAAATAGCCCTTGGTTTTCTTTTTCTTTTTTCGTTTCATGGAAATACTAAACATTAATATTGCAATAATTATACCTCTAGTTTGTTGTTTTCTTTCGAAGTTGTAACTTTAAATACTATTTTGTTAAGAGTATAAAATAAAAAATATTATTAAATGCCATTTAATAAATGAAGTTTGACATTTTCCAAACCAAAAAAGCATTCCACAAAATGTGGATGGATACAAAGAAAAATAGGGTATAGCTTTTATGTGTATTTATTTATGAAAAATAGTTGGTCGGATTGGGTTATACCTATTTCTATGCAATTCCCCATTTACTAAATTAAAAAGTAAATTATTATATTTTTGTTAGGTAAATGAGGGACCAAGTTGTGATTAATAATTATTGTCTCTTATATTTTACGTAGCAAAAAGAGTATAATAATTTAAAGTTTTTAAAATTTTCGATATGAAAATATTATAATATAGGTAGACAATTTTGAAGTTGGATAAAATTCTTATCATATATATGCCATTAAAACTATACTTGTTGTTCTATATAATAGCTTATAATATAAGTAAAAAGAAAATATATTGCTTAGACAATAAAGTGGTGTATATGCATGTTACTTCATTTTCAACAAATTAAGAAAATTATTCTACGTTTACAGTTTTAGTAAAACTTTGAACCAAAATCCAAAAATTATAATATTTAATTATTACATGTATTTCTATAAAGTACCAATAAGAAGTATAAGTCTTGATATTAATTAGAAGTATATACAAAGTGATCCAATAAAAACTTTCTATATATTTAGATAAATACTTTAATTAATGTGTTGCAAATTACAATATTAAAAATAAATTTTCATTTGAACCATTAAAATTTTAAACCATTTATGAATATGTACCTTGAATTCCATTAAGGTGTGACACAATTTCAATTGAATTATCAATCATTTTAATGACATTGACACTTGAATAAAAATTAACGTGACATTAAAAAAAAACATTTATGTGAGATATCATCTTTAAATGCTTAATATCAATACACCCTACCTTGATTTTAAAACTTAATTTTCTTTAACATTTTTTTTTTCCAAACTATAACAAATTTTTTTATGGAATTCTAAAGAAAAAGTTAGATATTTAGTATTTTAAAAATGGCAACTAAGAAAATGAAATGATAATAAATATGGATAATTAATTGGTGTAATTTGTTGGGGAAAAGGGTTTGGTTGTTGTCGATAATGAACGGAGACAAGACAGGGAGGCTATTGAAGTACGATCCACGTACCCAAAATGTCACCGTGTTGCGGAATGGCCTCGCTTTCCCCAACGGCGTGGCTTTGAACGCCGATTCTTCCTTCCTTCTAATGGCTGAAACCGGCACTCTCCAGGTCTTAAAGTTTTGGTTAAAGGTAATTATTAAATCATCATAACTTTTCTTGCTATACTTTTAAAAGTTTTACCTTTTCTTTTTTCTTTTTTTTCAGTTGTATCCATTTTTTTTAAATCTTAAATTTAGAAAAATATTGTGAATCTTATTTTATCTTAATTAATGATGCAAGGGTCCCAAAGCTAACACGATGGAGATATTCGCGCAACTTGAACGGTTTCCAGACAACATAAAAAGAACTGATAACGGTGACTTTTGGATAGCCATGAACAGTGCAAGAGGGACACTGGATACTCAAACGTGGAAGGAGCTGTACCGGGGAGCAACAATGAAGCAGGGGGAAGTGAAGATCCCGTGGATTCAGGCCGATCCGGTGGCGGTGAAGTTGAACGAGAGAGGGGAAGTGAAGGGGATGGTTGATGGAGGGGAGGGGCAAGCATTAGAGTCAGTGAGTGAGGTTGAAGAAAGTAGAGGGAGGTTGTGGATTGGTTCAGCTGTTAAACCATACGTTGGTTTAATCATCAATGGATAGAACCATAGAGTACTCAGTACACATTGGCATTTGAAAAAGAAAAGAAGGAGAAATGGATAAACTTCTGTGTTAAAATTATATTATTGTATCAAGTAAATTCTTGCAAAAGATTGTGTGTGTGTGTGTGTGTGTTTTTAGTTTGTAACAAAAACCCACCAACTGGTAAATTATGATGGGGGTATATATCTTCCCACGAGTTGTAAGAATTAAGATGGAATATATTTCATGGTTATCTGATTTGATATATATATCATGATGTTAACTTTCATGAAGT ATGAAGAAGTGTGTGGGAGTTTGTTCATTGTTGGGTGCGGTGGCCGTTCTGTGTGTGGTGGCGGTGGTGGAAGGTGCAATTGAAGCCGTAGAGCTTCCCGGTGGTGTTTTCGGGCCGGAAAGTATAGCCTTTGACTGCCGTGGAGAAGGGCCCTACGCCAGTGTCTCCGATGGCAGAATCCTCAAGTGGAAAGGTCCTCACTTGGGTTGGACTCAATTTGCTCTTACCTCACCCAACAGGGAAGGGAAAGAATGCGATGGGCAGCCCCAAAGTGAGGCAGCATGTGGAAGGCCATTAGGGATCAAATTTCACCCTACAACTTGTGACCTTTACATTGCTGATGCTTATTTTGGCCTTCTGGCTGTAGGACCTAAGGGTGGCTTGGCTCGCCAGCTTGCCACTTCTGCTCAAGGCGTGCCACTTCGCTTCACTAATGCTCTTGATATTGATCCTCAAAATGGCATTGTTTATTTCACCGATAGTAGCATCCTCTTTCAAAGAAGGGTTTGGTTGTTGTCGATAATGAACGGAGACAAGACAGGGAGGCTATTGAAGTACGATCCACGTACCCAAAATGTCACCGTGTTGCGGAATGGCCTCGCTTTCCCCAACGGCGTGGCTTTGAACGCCGATTCTTCCTTCCTTCTAATGGCTGAAACCGGCACTCTCCAGGTCTTAAAGTTTTGGTTAAAGGGTCCCAAAGCTAACACGATGGAGATATTCGCGCAACTTGAACGGTTTCCAGACAACATAAAAAGAACTGATAACGGTGACTTTTGGATAGCCATGAACAGTGCAAGAGGGACACTGGATACTCAAACGTGGAAGGAGCTGTACCGGGGAGCAACAATGAAGCAGGGGGAAGTGAAGATCCCGTGGATTCAGGCCGATCCGGTGGCGGTGAAGTTGAACGAGAGAGGGGAAGTGAAGGGGATGGTTGATGGAGGGGAGGGGCAAGCATTAGAGTCAGTGAGTGAGGTTGAAGAAAGTAGAGGGAGGTTGTGGATTGGTTCAGCTGTTAAACCATACGTTGGTTTAATCATCAATGGATAG MKKCVGVCSLLGAVAVLCVVAVVEGAIEAVELPGGVFGPESIAFDCRGEGPYASVSDGRILKWKGPHLGWTQFALTSPNREGKECDGQPQSEAACGRPLGIKFHPTTCDLYIADAYFGLLAVGPKGGLARQLATSAQGVPLRFTNALDIDPQNGIVYFTDSSILFQRRVWLLSIMNGDKTGRLLKYDPRTQNVTVLRNGLAFPNGVALNADSSFLLMAETGTLQVLKFWLKGPKANTMEIFAQLERFPDNIKRTDNGDFWIAMNSARGTLDTQTWKELYRGATMKQGEVKIPWIQADPVAVKLNERGEVKGMVDGGEGQALESVSEVEESRGRLWIGSAVKPYVGLIING Homology
BLAST of Cucsat.G16310.T1 vs. ExPASy Swiss-Prot
Match: Q4V3D9 (Protein STRICTOSIDINE SYNTHASE-LIKE 10 OS=Arabidopsis thaliana OX=3702 GN=SSL10 PE=2 SV=1) HSP 1 Score: 334.0 bits (855), Expect = 2.1e-90 Identity = 165/319 (51.72%), Postives = 216/319 (67.71%), Query Frame = 0
BLAST of Cucsat.G16310.T1 vs. ExPASy Swiss-Prot
Match: Q8VWF6 (Protein STRICTOSIDINE SYNTHASE-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=SSL3 PE=2 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 1.4e-73 Identity = 150/330 (45.45%), Postives = 206/330 (62.42%), Query Frame = 0
BLAST of Cucsat.G16310.T1 vs. ExPASy Swiss-Prot
Match: Q9SLG8 (Protein STRICTOSIDINE SYNTHASE-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=SSL2 PE=2 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 9.2e-70 Identity = 144/331 (43.50%), Postives = 198/331 (59.82%), Query Frame = 0
BLAST of Cucsat.G16310.T1 vs. ExPASy Swiss-Prot
Match: Q9M1J6 (Protein STRICTOSIDINE SYNTHASE-LIKE 9 OS=Arabidopsis thaliana OX=3702 GN=SSL9 PE=2 SV=1) HSP 1 Score: 259.2 bits (661), Expect = 6.6e-68 Identity = 137/328 (41.77%), Postives = 199/328 (60.67%), Query Frame = 0
BLAST of Cucsat.G16310.T1 vs. ExPASy Swiss-Prot
Match: F4IJZ6 (Protein STRICTOSIDINE SYNTHASE-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=SSL1 PE=3 SV=1) HSP 1 Score: 254.6 bits (649), Expect = 1.6e-66 Identity = 129/310 (41.61%), Postives = 186/310 (60.00%), Query Frame = 0
BLAST of Cucsat.G16310.T1 vs. NCBI nr
Match: XP_004150130.1 (protein STRICTOSIDINE SYNTHASE-LIKE 10 [Cucumis sativus] >KGN50870.1 hypothetical protein Csa_023098 [Cucumis sativus]) HSP 1 Score: 712 bits (1839), Expect = 3.26e-259 Identity = 350/350 (100.00%), Postives = 350/350 (100.00%), Query Frame = 0
BLAST of Cucsat.G16310.T1 vs. NCBI nr
Match: XP_008465977.1 (PREDICTED: protein STRICTOSIDINE SYNTHASE-LIKE 10-like [Cucumis melo]) HSP 1 Score: 689 bits (1779), Expect = 1.00e-249 Identity = 337/351 (96.01%), Postives = 346/351 (98.58%), Query Frame = 0
BLAST of Cucsat.G16310.T1 vs. NCBI nr
Match: KAA0050238.1 (protein STRICTOSIDINE SYNTHASE-LIKE 10-like [Cucumis melo var. makuwa] >TYJ98168.1 protein STRICTOSIDINE SYNTHASE-LIKE 10-like [Cucumis melo var. makuwa]) HSP 1 Score: 687 bits (1773), Expect = 4.53e-249 Identity = 337/351 (96.01%), Postives = 345/351 (98.29%), Query Frame = 0
BLAST of Cucsat.G16310.T1 vs. NCBI nr
Match: XP_023536583.1 (protein STRICTOSIDINE SYNTHASE-LIKE 10-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 579 bits (1493), Expect = 2.16e-206 Identity = 282/357 (78.99%), Postives = 315/357 (88.24%), Query Frame = 0
BLAST of Cucsat.G16310.T1 vs. NCBI nr
Match: XP_022961558.1 (protein STRICTOSIDINE SYNTHASE-LIKE 10-like [Cucurbita moschata]) HSP 1 Score: 577 bits (1488), Expect = 1.25e-205 Identity = 275/327 (84.10%), Postives = 300/327 (91.74%), Query Frame = 0
BLAST of Cucsat.G16310.T1 vs. ExPASy TrEMBL
Match: A0A0A0KMJ0 (Str_synth domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G305760 PE=3 SV=1) HSP 1 Score: 712 bits (1839), Expect = 1.58e-259 Identity = 350/350 (100.00%), Postives = 350/350 (100.00%), Query Frame = 0
BLAST of Cucsat.G16310.T1 vs. ExPASy TrEMBL
Match: A0A1S3CQG7 (protein STRICTOSIDINE SYNTHASE-LIKE 10-like OS=Cucumis melo OX=3656 GN=LOC103503543 PE=3 SV=1) HSP 1 Score: 689 bits (1779), Expect = 4.87e-250 Identity = 337/351 (96.01%), Postives = 346/351 (98.58%), Query Frame = 0
BLAST of Cucsat.G16310.T1 vs. ExPASy TrEMBL
Match: A0A5A7U4P2 (Protein STRICTOSIDINE SYNTHASE-LIKE 10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00510 PE=3 SV=1) HSP 1 Score: 687 bits (1773), Expect = 2.19e-249 Identity = 337/351 (96.01%), Postives = 345/351 (98.29%), Query Frame = 0
BLAST of Cucsat.G16310.T1 vs. ExPASy TrEMBL
Match: A0A6J1HC56 (protein STRICTOSIDINE SYNTHASE-LIKE 10-like OS=Cucurbita moschata OX=3662 GN=LOC111462102 PE=3 SV=1) HSP 1 Score: 577 bits (1488), Expect = 6.04e-206 Identity = 275/327 (84.10%), Postives = 300/327 (91.74%), Query Frame = 0
BLAST of Cucsat.G16310.T1 vs. ExPASy TrEMBL
Match: A0A6J1JQT3 (protein STRICTOSIDINE SYNTHASE-LIKE 10-like OS=Cucurbita maxima OX=3661 GN=LOC111486992 PE=3 SV=1) HSP 1 Score: 575 bits (1482), Expect = 4.96e-205 Identity = 280/357 (78.43%), Postives = 313/357 (87.68%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
|