Cucsat.G15107.T4 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTTGTCTCATCCTCTCTTTTTGGTTTGAGTGGTGGAAGTCCTTAAAACTTTGCTTATAAAAAGCATGTAAAATTTGAGGCATTGTGTGTGTCTGTGTGTCTGTGTGTAATTCTATATTCATATCAGTAAGCTGAAGGCTTTGAACAAACGACACACAAAGGAGAGGGAAAAGAGATGGAGGGTCTTAGGAGGTTTTTGGTTTTGGCAAAGCCATATTTTGGAGTTCTTTTTATGCAATTGGGTTCAGCTGGAATGGCGATTATTGCAAAGTTTGCTTTGAACAAAGGGATGAGCCAATATGTTTTTGTGTTTTATCGTATGATTATTGCTACTGTTATCATGGCTCCTTTTGCCATCATCTTTGAAAGGTCATTTATTACCCCTTTCTTTCTCTTTTGTCTCTATACTTACCTACTAATTGCCAACCATGTCTGATAGTTTGTTTTTGAAAAATATTTAGGTTTATTTTGGTATGTACACCACAAATCTTATTTGGTGTACTCCAATCACAGTTGCTTGATCACAGTTTTTTATGTACTAAACTCTTCTTTAATCATAGTTGTTTAATTACTCAGAATTTTTGTTTAATCATAGTATCCATACATGTATAAAACTAGAGTGTTGCTTGGTGTTATTGTGTATCATGAAAAATATAGAAAAAGTTTCTTTTTTTAATGCTTAAAATTTTGAAGAATATGTGTATTTTGTGTCTGAGTTAAAAAAAAAAAAAAAGTTAATTCTCATGTTTATAAAAATTGACTGGTTTGAGATCCCTAATTTTCAAAAACTTTTAGTACCTGAATTTTAAAAATTAGATTAAAACGTCTCTCAAATAACTTTATACTTTTATTTTAAATTATAATTACATGTCATTTATAATTAGAAGAATAATTTCTAAAAATTACAGTCTCTAACACTATTTTTTTCCAATTTTAAAATCATATAATTATTCTTTAAAAATCAAACAAAAAAATACTTTTAGAGTATTTTAAATCTATTTTTAAAAACTTGGGACTAAAATGTACCAAACACCCTTAATTAACTTAACTATCAATATTTGAAGATTAAGAAGGCAATTTAATTATTCAAAAAAAATTAAAATAGAAAAATATTTCAAAAATAAAACATTTCACAAAATATTTATGCTTCATTGAAGTAAAATTTTGACTTATACTGATTTATTTGGTAGAAAATATATACTAATTGAGTTGTTTCAATAATTAGATATTAAACAATGTATTTAAAATCTTAAGATTGTGGGTTGAATTTAACATCTTTTAAGTGAAATATTTGAGTGGTACACACTCATATATAATTTATGTTCATTTAATAATTTTTCGTATTTAGTTTTACTTAACTTCTGACCAAATTTCAAAAACAAAAATAATGGTACTCCAATAATCAATATTTCTTTTTAAAAGTTTTAGTTTTTAAAAATTTGTGCTTGTTTTTCATCCAAATATTTAGAATGGTTTTATCATTTCCTAAATAAACACTAAAAAAATTAGTAAAATTTCTATAAAAAAAAAAAAAAAAAAGAAAATTAGCTGCTTCTTTTTATTTTAAAACTTAGAAACCGAGAGATACAGATAGTGTTTGTATCTTAAATTTTCGAAAATCGAAAACGAACCATTTATAAAGGAAAGAAGTGGTGTTTTCTACCTTAAGTTTTAAAACGAAAAATAAATAAATAAATAGTTATGAAATGGATATTATTAAGATTAATATACTTCCTATATGATGTGTTGTATAGAAGGGTGTGAGGTATAATTAGTTTTTGCATGGCGCAGGAAAGTGAGGACGAAGATGACCATTTCGTTGGCCTTCAAGATTGTGATGCTTGGTCTTCTTGAGTATGATCCCCACCATTCATTCACTTCATTTCAATCCAATAAAACTTCATTTCTTTATTTAACATTCTTTTCTCTTTAACATCTTCTACATATCCATTTTTATTTCTCTTTCTTTCACGTCGAAGGTATATATTTATCTTTGCTATCTTAAAAAAATTACGTCCTATTTTTATTTTATCAGTTAAAAAACACTTTTATTATCTAAACTTCTATAAACATAATAATTTAGTTTCTAAACTAGCGGATAGCAATTTACTTTAATATTAATTTTAATCAAATCACAATATATAATCTCTATATATACACTTTAAAATCTGAACAATTTATTTCCTATTATTGTGTAAAAAATCTCATCAAAATAAGGTACCAACTTTGCATGGGTTACAAATAAATCTGATTTTCAATCCATTTGTGGACCTATATGTGTGAGAAATTTAATTAAGTAATATTAATAGAGAAAATTATTACAAATCTTAAAACACAAAAGGACTATATTGTTTTACTTATTGATGTTTTAGTGATACAATTGTTATGAGTTTGGAAGTATGGAGGTCAGAAAATCATTACAAACTGAAGTTCATGGACTAGATTATTATTACTTTCATGGAAGTTTTGGATTAGAAGGTGTCTTTAAACTGGGTTTTACGATAAATTACGATAAATCTAATCTTTGTATGGACGTCGTTGTTTATGAATGATATAGGCCAGTGATTGATCTCAACTTATACTTTACTGGTATGAAGTACACAACAGCAACCTTTGCAGTTGCCATGTGCAATGTTCTTCCTGCTTTTGCTTTCCTCATGGCTTGGGCTTGCAGGTACTTTCACTTTCAAAACTTTCATTTATCTAAAAGAAATCATCAACCCCTTTGAATTTTTCCTTTTTTCTTTTCTTTTCGAGTTTAATACGTGTAGTGGGGGATTCGAAGTTTCGACCCTTATCAGACATTAAAAGTTGAGCTTTAATTTCTTTACGTGTCTATTTGACGATTTTATGAAATGTTTTTGAGTCTTTTGTTGGTTTGGATCTTTTTTTCTTTTTCTGTAATGTTTTGTACATGAAATAATTAACTTTTCAAAGGACCCTTTTTGTTGTCTCCCATAACATTATATTGTATTAAAAGTGCTATATTTGGTGACTGTTGATAACTTTTTATATTAAGTTTTAATAAAGACATATTGTGTCACTTACGTGTGTTAGGGTTTTTCAAACATATTCTAATTCTAATCTAAATGCTAAATTAATAATTGGTGAACTTTGGAAGTACTCAAACAAAAATATGGAAGGATCAAATCTGAAGTTTATAAAGTTTATGAATCAAATCTAAATTAAGCTTGAAAATTTTGGCCTTCGCAATTCTTTCATTTTTGTTTTTTAATTTTTTAAAAATGGGTGTGTTAGAGTTCTAATTCATCTTTTTGTTTTAGAACAAGAAACTTGTTGTTTAAATTAGGAAGGAAAACTGAAAATGAAAAAAAAGAAAGCTTTTGATTTTAAAAAACAAAAACAAAATAGTTACTAAACGGCCCTTGGCTATTTTGCTTTTTGTTTTTATTTTTGAAAACTAAGTCTTTTTTTCTCTTTTACGTTTTATAATGATTTGCATTAATTTCTATTAAATACGATAAAGAAATAGTGAATACAAACTTAGTTTTCAAAAACCAAAAATAAAACTATGTTATGATTGAATTTTTAAAAAAGAGAAGCAGACTATAATATGATTGGATTTAAAAAAAAAAGAATTAATATGATTAAATTGAATGTTTTTTTTCTTTTTTTATTTGGATAGAAGATCCAGTCAATTTTAATTTTATTATGCACATAATAATTAAAATCCAATATAAGAAATATATAACTTTAAAGAGAATCACTTTGTTGAGTGGGTTCAAATCCCACAGCTGTGTACCAATGTCTGGTAGTTCATAAAGTTCCAATCAATGTGTAATCTCTTCCTCTTTTTTTTTATCCCAACTTTTGAACTCCAACAGAAAATAAAAACCAAACACTTTTTTTCTTTTTGAAAATATAGCCATTGAATTATGAGGGTGGGGTTATTCGAACTTTACGCCCATAATACTTTTTTCTCATCATTGTTTCATAACACAATTTCGGGTAAAGGGAGAAAGCTAACCCTCCACAAATGGTTGCATATAGGAATACATAATCTAAATTATAAGAATTTCAATGAAACAATACGAACATTGATATATGGCAGGCTCGAGAGAGTGAATATTTGGAAAAGAGGAAGCCAAGCAAAAATAGTAGGAACCATAGTAACAATAGGAGGAGCCATGATTATGACATTCATAAGAGGACCCATGTTGAATCTGCCATGGACAAAACCCAACCACCCCTCTTCTTCTTCTTCTTCATCTTCTTCAATAAATCACCACAACCAAATCAAGGGCTCCCTCATGATAACTATTGGCTGCATTTGCCAGTCAGCTTTCATCATTCTTCAGGTAAATAAACAAAAGTTTCACTTTTGCCTACTCAAAATAATCAGAAACTAATCAACTTGATGTCGATTGAATTAGGCAATTACATTGAAATTGTACCCAGCCGAGCTATCCCTTACAGCATTGATATGTTTAGTGGCAACCGTTGGAGGCTGTTTGGTGGCTTTGGTCATGGAGAGAGGGAACCCTTCTGCTTGGGCTTTGCACTTTGATAGCCAGCTTCTATCTGTGGTTTATGCTGTAAGTATAGATTTTTGCTGTTGTGTTGAATGATTACAAAGTAATAACATAACATTTATGGTTTGTTGTAGGGTGTAATTTGTTCAGGGGTAACATACTACATTCAAGGAATGGTGATGCAAATAAAAGGGCCTGTTTTTGTCACTGCATTCAATCCTCTATCCATGATTTTTGTTGCAATCATGAGCTCCTTCATCTTATCTGAGATTATGTTGTTGGGAAGGTAAGTGGAAGGCCCAAAATTTCCTAACAAGACTGAAAAGGGCAATGCAATTAATAGATCTACAAGAGAGATCATTTTCAGTTGCCTATTGAGAAACAACCTTGCTAAAGCTTTCAACTCTTTTGTAGGATTGTTGGAGCAGTGACCATAATCACTGGGTTGTACCTGGTTTTGTGGGGCAAAAGAAAAGATAAGCTTTTAGTTAAATCAGACTCTGATGGTAAGCAACAAATGACTGAAACAGATGAGGCTTCGAAGAGGACGG ATGGAGGGTCTTAGGAGGTTTTTGGTTTTGGCAAAGCCATATTTTGGAGTTCTTTTTATGCAATTGGGTTCAGCTGGAATGGCGATTATTGCAAAGTTTGCTTTGAACAAAGGGATGAGCCAATATGTTTTTGTGTTTTATCGTATGATTATTGCTACTGTTATCATGGCTCCTTTTGCCATCATCTTTGAAAGGAAAGTGAGGACGAAGATGACCATTTCGTTGGCCTTCAAGATTGTGATGCTTGGTCTTCTTGAGCCAGTGATTGATCTCAACTTATACTTTACTGGTATGAAGTACACAACAGCAACCTTTGCAGTTGCCATGTGCAATGTTCTTCCTGCTTTTGCTTTCCTCATGGCTTGGGCTTGCAGGCTCGAGAGAGTGAATATTTGGAAAAGAGGAAGCCAAGCAAAAATAGTAGGAACCATAGTAACAATAGGAGGAGCCATGATTATGACATTCATAAGAGGACCCATGTTGAATCTGCCATGGACAAAACCCAACCACCCCTCTTCTTCTTCTTCTTCATCTTCTTCAATAAATCACCACAACCAAATCAAGGGCTCCCTCATGATAACTATTGGCTGCATTTGCCAGTCAGCTTTCATCATTCTTCAGGCAATTACATTGAAATTGTACCCAGCCGAGCTATCCCTTACAGCATTGATATGTTTAGTGGCAACCGTTGGAGGCTGTTTGGTGGCTTTGGTCATGGAGAGAGGGAACCCTTCTGCTTGGGCTTTGCACTTTGATAGCCAGCTTCTATCTGTGGTTTATGCTGTAAGTATAGATTTTTGCTGTTGTGTTGAATGA MEGLRRFLVLAKPYFGVLFMQLGSAGMAIIAKFALNKGMSQYVFVFYRMIIATVIMAPFAIIFERKVRTKMTISLAFKIVMLGLLEPVIDLNLYFTGMKYTTATFAVAMCNVLPAFAFLMAWACRLERVNIWKRGSQAKIVGTIVTIGGAMIMTFIRGPMLNLPWTKPNHPSSSSSSSSSINHHNQIKGSLMITIGCICQSAFIILQAITLKLYPAELSLTALICLVATVGGCLVALVMERGNPSAWALHFDSQLLSVVYAVSIDFCCCVE Homology
BLAST of Cucsat.G15107.T4 vs. ExPASy Swiss-Prot
Match: O80638 (WAT1-related protein At2g39510 OS=Arabidopsis thaliana OX=3702 GN=At2g39510 PE=2 SV=1) HSP 1 Score: 286.2 bits (731), Expect = 3.9e-76 Identity = 148/249 (59.44%), Postives = 191/249 (76.71%), Query Frame = 0
BLAST of Cucsat.G15107.T4 vs. ExPASy Swiss-Prot
Match: Q9ZUS1 (WAT1-related protein At2g37460 OS=Arabidopsis thaliana OX=3702 GN=At2g37460 PE=2 SV=1) HSP 1 Score: 268.9 bits (686), Expect = 6.4e-71 Identity = 140/251 (55.78%), Postives = 190/251 (75.70%), Query Frame = 0
BLAST of Cucsat.G15107.T4 vs. ExPASy Swiss-Prot
Match: Q9SUF1 (WAT1-related protein At4g08290 OS=Arabidopsis thaliana OX=3702 GN=At4g08290 PE=2 SV=1) HSP 1 Score: 238.8 bits (608), Expect = 7.1e-62 Identity = 119/260 (45.77%), Postives = 187/260 (71.92%), Query Frame = 0
BLAST of Cucsat.G15107.T4 vs. ExPASy Swiss-Prot
Match: Q9FNA5 (WAT1-related protein At5g13670 OS=Arabidopsis thaliana OX=3702 GN=At5g13670 PE=2 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 5.0e-55 Identity = 116/251 (46.22%), Postives = 168/251 (66.93%), Query Frame = 0
BLAST of Cucsat.G15107.T4 vs. ExPASy Swiss-Prot
Match: F4IQX1 (WAT1-related protein At2g37450 OS=Arabidopsis thaliana OX=3702 GN=At2g37450 PE=2 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 1.1e-54 Identity = 121/251 (48.21%), Postives = 164/251 (65.34%), Query Frame = 0
BLAST of Cucsat.G15107.T4 vs. NCBI nr
Match: XP_004147717.2 (WAT1-related protein At2g39510 [Cucumis sativus]) HSP 1 Score: 496 bits (1276), Expect = 1.95e-174 Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0
BLAST of Cucsat.G15107.T4 vs. NCBI nr
Match: XP_008461645.1 (PREDICTED: WAT1-related protein At2g39510-like [Cucumis melo]) HSP 1 Score: 467 bits (1201), Expect = 5.05e-163 Identity = 249/261 (95.40%), Postives = 253/261 (96.93%), Query Frame = 0
BLAST of Cucsat.G15107.T4 vs. NCBI nr
Match: XP_038892005.1 (WAT1-related protein At2g39510-like [Benincasa hispida]) HSP 1 Score: 452 bits (1162), Expect = 4.64e-157 Identity = 237/261 (90.80%), Postives = 250/261 (95.79%), Query Frame = 0
BLAST of Cucsat.G15107.T4 vs. NCBI nr
Match: KAA0050295.1 (WAT1-related protein [Cucumis melo var. makuwa]) HSP 1 Score: 422 bits (1086), Expect = 1.56e-145 Identity = 220/261 (84.29%), Postives = 237/261 (90.80%), Query Frame = 0
BLAST of Cucsat.G15107.T4 vs. NCBI nr
Match: XP_022956895.1 (WAT1-related protein At2g39510-like [Cucurbita moschata]) HSP 1 Score: 409 bits (1050), Expect = 6.08e-140 Identity = 217/263 (82.51%), Postives = 236/263 (89.73%), Query Frame = 0
BLAST of Cucsat.G15107.T4 vs. ExPASy TrEMBL
Match: A0A0A0KS68 (WAT1-related protein OS=Cucumis sativus OX=3659 GN=Csa_5G181430 PE=3 SV=1) HSP 1 Score: 496 bits (1276), Expect = 9.42e-175 Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0
BLAST of Cucsat.G15107.T4 vs. ExPASy TrEMBL
Match: A0A1S3CF33 (WAT1-related protein OS=Cucumis melo OX=3656 GN=LOC103500199 PE=3 SV=1) HSP 1 Score: 467 bits (1201), Expect = 2.44e-163 Identity = 249/261 (95.40%), Postives = 253/261 (96.93%), Query Frame = 0
BLAST of Cucsat.G15107.T4 vs. ExPASy TrEMBL
Match: A0A5A7U9L7 (WAT1-related protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold88G00140 PE=3 SV=1) HSP 1 Score: 422 bits (1086), Expect = 7.55e-146 Identity = 220/261 (84.29%), Postives = 237/261 (90.80%), Query Frame = 0
BLAST of Cucsat.G15107.T4 vs. ExPASy TrEMBL
Match: A0A6J1GZ11 (WAT1-related protein OS=Cucurbita moschata OX=3662 GN=LOC111458444 PE=3 SV=1) HSP 1 Score: 409 bits (1050), Expect = 2.94e-140 Identity = 217/263 (82.51%), Postives = 236/263 (89.73%), Query Frame = 0
BLAST of Cucsat.G15107.T4 vs. ExPASy TrEMBL
Match: A0A6J1K5X5 (WAT1-related protein OS=Cucurbita maxima OX=3661 GN=LOC111490981 PE=3 SV=1) HSP 1 Score: 406 bits (1044), Expect = 2.32e-139 Identity = 215/262 (82.06%), Postives = 234/262 (89.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
|