Cucsat.G14156.T4 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G14156.T4
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	transcription factor BEE 3-like
Location	ctg1869: 3436535 .. 3437388 (-)
RNA-Seq Expression	Cucsat.G14156.T4
Synteny	Cucsat.G14156.T4

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGTTTTGAAAAAAAAAGTTTTAGTTCAAAACATTCCATGGCTGACTTCACTCCGAACTTTCAAAGCTTAAAACCATCATCTTTCCCTCTAATGGATATAGATCCCAACCAAAACCCAAATCTTAATTTTCTTGACAACATTCCAATTTTGTTCAGTGAAAGTTTCTTTAACAATCAAACTGCTGTTCCTTCTCCTAGATTCCTAGAAAATTGGGGAGAAAATTTCCAAGGGATTTTCTCTCATCATCAAGCCAATCAGATCATAACTCCCACTTCTTCTCCTGTTTTTGAGCCTAAAAATCTATTTGGAAATGACCTCCATGGAAGCAAGAAAAGAAAGCTTGAAAATAATGATGCATATGAAAGCAGCTCTGGCAACTCTACCCCTCAAGTTTCTGAAAATGGGATCAACACCAAAAATGTAAACAAAAAAAACTCTCATCCTTTTTCGTTTTTCTATTCTCAAATTACAAAACTTATGGAAATGTTCTTACTTCCATGTATTATTTTCATGTCTGCAGAACAATGGAAAAGAGAAGCGGTCGAAAAAAGGCGACACAAACGACGGCGAAAAACCGAGGGAAGTTGTTCATGTTAGAGCTAGAAGAGGTCAAGCAACAGACAGTCATAGTGTAGCAGAAAGGGTACGTAACTTTGATTTGAAGAACATAAATTTAGACCTTTTCTTTTCTTTTACAAATGTATTTATGGAGATACAAACATTACTGTTATTCTCAAACAGATAAGAAGAGGCAAAATCAATGAAAGATTGAGATGTTTACAAGACATTGTTCCTGGATGTTACAAGGTAAATGAAAATTGAAGTTGTTTAGCAAAATTTTTCTAAAAAAACC

Coding sequence (CDS)

GGTTTTGAAAAAAAAAGTTTTAGTTCAAAACATTCCATGGCTGACTTCACTCCGAACTTTCAAAGCTTAAAACCATCATCTTTCCCTCTAATGGATATAGATCCCAACCAAAACCCAAATCTTAATTTTCTTGACAACATTCCAATTTTGTTCAGTGAAAGTTTCTTTAACAATCAAACTGCTGTTCCTTCTCCTAGATTCCTAGAAAATTGGGGAGAAAATTTCCAAGGGATTTTCTCTCATCATCAAGCCAATCAGATCATAACTCCCACTTCTTCTCCTGTTTTTGAGCCTAAAAATCTATTTGGAAATGACCTCCATGGAAGCAAGAAAAGAAAGCTTGAAAATAATGATGCATATGAAAGCAGCTCTGGCAACTCTACCCCTCAAGTTTCTGAAAATGGGATCAACACCAAAAATAACAATGGAAAAGAGAAGCGGTCGAAAAAAGGCGACACAAACGACGGCGAAAAACCGAGGGAAGTTGTTCATGTTAGAGCTAGAAGAGGTCAAGCAACAGACAGTCATAGTGTAGCAGAAAGGATAAGAAGAGGCAAAATCAATGAAAGATTGAGATGTTTACAAGACATTGTTCCTGGATGTTACAAGGTAAATGAAAATTGA

Protein sequence

GFEKKSFSSKHSMADFTPNFQSLKPSSFPLMDIDPNQNPNLNFLDNIPILFSESFFNNQTAVPSPRFLENWGENFQGIFSHHQANQIITPTSSPVFEPKNLFGNDLHGSKKRKLENNDAYESSSGNSTPQVSENGINTKNNNGKEKRSKKGDTNDGEKPREVVHVRARRGQATDSHSVAERIRRGKINERLRCLQDIVPGCYKVNEN

Homology

[Close]

BLAST of Cucsat.G14156.T4 vs. ExPASy Swiss-Prot
Match: Q8GWK7 (Transcription factor BEE 3 OS=Arabidopsis thaliana OX=3702 GN=BEE3 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 4.2e-22
Identity = 89/208 (42.79%), Postives = 112/208 (53.85%), Query Frame = 0


Query: 13  MADFTPNFQSLKPSSFPLMDIDPNQNPNLNFLDNIPILFSES----FFNNQTAVPSP-RF 72
           MA+ + +FQ+      P+  +    N  L+     P  FS S    FF+NQ     P + 
Sbjct: 1   MANLSSDFQTFTMDD-PIRQLAELSN-TLHHFQTFPPPFSSSLDSLFFHNQFPDHFPGKS 60

Query: 73  LENWGENFQGIFSHHQANQIITPTSSPVFEPKNLFGNDLHGS----KKRK-------LEN 132
           LEN   NF      HQ           +F P N+  N+   S    KKRK          
Sbjct: 61  LEN---NF------HQG----------IFFPSNIQNNEESSSQFDTKKRKSLMEAVSTSE 120

Query: 133 NDAYESSSGNSTPQVSENG-INTKNNNGKEKRSKKGDTNDGEKPREVVHVRARRGQATDS 192
           N   + +   S+ QVS NG I+TKNN+   +R K+    + EK REVVHVRARRGQATDS
Sbjct: 121 NSVSDQTLSTSSAQVSINGNISTKNNS--SRRGKRSKNREEEKEREVVHVRARRGQATDS 180

Query: 193 HSVAERIRRGKINERLRCLQDIVPGCYK 204
           HS+AER+RRGKINERL+CLQDIVPGCYK
Sbjct: 181 HSIAERVRRGKINERLKCLQDIVPGCYK 185

[Close]

BLAST of Cucsat.G14156.T4 vs. ExPASy Swiss-Prot
Match: Q8GZ13 (Transcription factor BEE 1 OS=Arabidopsis thaliana OX=3702 GN=BEE1 PE=1 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.3e-20
Identity = 74/176 (42.05%), Postives = 91/176 (51.70%), Query Frame = 0


Query: 36  NQNPNLNFLDNIPILFSESFFNNQTAVPSPRFLENWGENFQGIFSHHQANQII-----TP 95
           N N NL+F               QT  PS   LE+       +F HH   Q++     +P
Sbjct: 30  NNNSNLHF---------------QTFHPSSTSLES-------LFLHHHQQQLLHFPGNSP 89

Query: 96  TSSPVFEPKNLFGNDLHGSKKRKLENNDAYESSSGNSTPQVSENGINTKNNNG---KEKR 155
            SS  F   + F +  H       +      + S + T  VS+N        G   + KR
Sbjct: 90  DSSNNFSSTSSFLHSDHNIVDETKKRKALLPTLSSSETSGVSDNTNVIATETGSLRRGKR 149

Query: 156 SKKGDTNDGEKPREVVHVRARRGQATDSHSVAERIRRGKINERLRCLQDIVPGCYK 204
            KK    + EK REVVHVRARRGQATDSHS+AER+RRGKINERLRCLQD+VPGCYK
Sbjct: 150 LKKKKEEEDEKEREVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYK 183

[Close]

BLAST of Cucsat.G14156.T4 vs. ExPASy Swiss-Prot
Match: A4D998 (Transcription factor bHLH75 OS=Arabidopsis thaliana OX=3702 GN=BHLH75 PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 7.0e-17
Identity = 52/104 (50.00%), Postives = 69/104 (66.35%), Query Frame = 0


Query: 100 NLFGNDLHGSKKRKLENNDAYESSSGNSTPQVSENGINTKNNNGKEKRSKKGDTNDGEKP 159
           + F N LHG+ +RK           GN      E+G   +    +E+ +  GD  + +KP
Sbjct: 56  HFFPNLLHGNTRRK-----------GNK----EESGSKRRRKRSEEEEAMNGD--ETQKP 115

Query: 160 REVVHVRARRGQATDSHSVAERIRRGKINERLRCLQDIVPGCYK 204
           ++VVHVRA+RGQATDSHS+AER+RR KINERL+CLQD+VPGCYK
Sbjct: 116 KDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYK 142

[Close]

BLAST of Cucsat.G14156.T4 vs. ExPASy Swiss-Prot
Match: Q9SRT2 (Transcription factor bHLH62 OS=Arabidopsis thaliana OX=3702 GN=BHLH62 PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.7e-13
Identity = 61/162 (37.65%), Postives = 88/162 (54.32%), Query Frame = 0


Query: 51  FSESFFNNQTAVPSPRFLENWGENFQGIFSHHQANQIITPTSSPVFEP--KNLFGNDLHG 110
           F    FN++T  P P        N   I ++ +  ++   +SSPVF+P   ++   +  G
Sbjct: 151 FGSRSFNSRTNSPFPI------NNEPPITTNEKMPRV---SSSPVFKPLASHVPAGESSG 210

Query: 111 SKKRKLENNDAYESSSGNSTPQVSENGINTKNNNGKEKRSKKGDTNDGEKPREV------ 170
              RK +       S  NS   VS +    +  +   KR KK + N G+K + +      
Sbjct: 211 ELSRKRKT-----KSKQNSPSAVSSSKEIEEKEDSDPKRCKKSEEN-GDKTKSIDPYKDY 270

Query: 171 VHVRARRGQATDSHSVAERIRRGKINERLRCLQDIVPGCYKV 205
           +HVRARRGQATDSHS+AER+RR KI+ER++ LQD+VPGC KV
Sbjct: 271 IHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKV 297

[Close]

BLAST of Cucsat.G14156.T4 vs. ExPASy Swiss-Prot
Match: Q9LV17 (Transcription factor bHLH79 OS=Arabidopsis thaliana OX=3702 GN=BHLH79 PE=1 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.0e-12
Identity = 65/200 (32.50%), Postives = 96/200 (48.00%), Query Frame = 0


Query: 19  NFQSLKPSSFPLMDIDP-----NQNPNLNFLDNIPILFSESFFNNQTAVPSPR------F 78
           +F +  PSS+ L +I P          L    N   +F+ S  +    V +         
Sbjct: 10  SFSAANPSSYTLSEIWPFPVNDAVRSGLRLAVNSGRVFTRSEHSGNKDVSAAEESTVTDL 69

Query: 79  LENWG-ENFQGIFSHHQANQIITPTSSPVFEPKNLFGNDL--HGSKKRKLENNDAYESSS 138
              WG    + + S   ++++++ +SS         GN+L   G KKRKL       S S
Sbjct: 70  TAGWGSRKTRDLNSEDDSSKMVSSSSS---------GNELKESGDKKRKL-----CGSES 129

Query: 139 GNSTPQVSENGINTKNNNGKEKRSKKGDTNDGEKPREVVHVRARRGQATDSHSVAERIRR 198
           GN    +   G  +    G +   +K   N  E P++ +HVRARRGQATD HS+AER RR
Sbjct: 130 GNGDGSMRPEGETSSGGGGSKATEQK---NKPEPPKDYIHVRARRGQATDRHSLAERARR 189

Query: 199 GKINERLRCLQDIVPGCYKV 205
            KI+E++  LQDI+PGC K+
Sbjct: 190 EKISEKMTALQDIIPGCNKI 192

[Close]

BLAST of Cucsat.G14156.T4 vs. NCBI nr
Match: XP_004137476.1 (transcription factor BEE 3 [Cucumis sativus] >KGN64122.1 hypothetical protein Csa_013866 [Cucumis sativus])

HSP 1 Score: 382 bits (980), Expect = 5.70e-132
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0


Query: 13  MADFTPNFQSLKPSSFPLMDIDPNQNPNLNFLDNIPILFSESFFNNQTAVPSPRFLENWG 72
           MADFTPNFQSLKPSSFPLMDIDPNQNPNLNFLDNIPILFSESFFNNQTAVPSPRFLENWG
Sbjct: 1   MADFTPNFQSLKPSSFPLMDIDPNQNPNLNFLDNIPILFSESFFNNQTAVPSPRFLENWG 60

Query: 73  ENFQGIFSHHQANQIITPTSSPVFEPKNLFGNDLHGSKKRKLENNDAYESSSGNSTPQVS 132
           ENFQGIFSHHQANQIITPTSSPVFEPKNLFGNDLHGSKKRKLENNDAYESSSGNSTPQVS
Sbjct: 61  ENFQGIFSHHQANQIITPTSSPVFEPKNLFGNDLHGSKKRKLENNDAYESSSGNSTPQVS 120

Query: 133 ENGINTKNNNGKEKRSKKGDTNDGEKPREVVHVRARRGQATDSHSVAERIRRGKINERLR 192
           ENGINTKNNNGKEKRSKKGDTNDGEKPREVVHVRARRGQATDSHSVAERIRRGKINERLR
Sbjct: 121 ENGINTKNNNGKEKRSKKGDTNDGEKPREVVHVRARRGQATDSHSVAERIRRGKINERLR 180

Query: 193 CLQDIVPGCYK 203
           CLQDIVPGCYK
Sbjct: 181 CLQDIVPGCYK 191

[Close]

BLAST of Cucsat.G14156.T4 vs. NCBI nr
Match: XP_008458311.1 (PREDICTED: transcription factor BEE 3-like [Cucumis melo])

HSP 1 Score: 344 bits (882), Expect = 4.56e-117
Identity = 181/193 (93.78%), Postives = 184/193 (95.34%), Query Frame = 0


Query: 13  MADFTPNFQSLKPSSFPLMD-IDPNQNPNLNFLDNIPILFSESFFNNQTAVPSPRFLENW 72
           MADFTPNFQSLKPSSFPLMD IDPNQNPNLNFLDNIPI FS+SFFNNQTAVPSPRFLENW
Sbjct: 1   MADFTPNFQSLKPSSFPLMDHIDPNQNPNLNFLDNIPIWFSDSFFNNQTAVPSPRFLENW 60

Query: 73  GENFQGIFSHHQANQIITPTSSPVFEPKNLFGNDLHGS-KKRKLENNDAYESSSGNSTPQ 132
           GENFQGIFS  QANQIITP SSPVFEPK+ FGNDLHGS KKRKLENNDAYESSSGNSTPQ
Sbjct: 61  GENFQGIFS--QANQIITPISSPVFEPKDPFGNDLHGSIKKRKLENNDAYESSSGNSTPQ 120

Query: 133 VSENGINTKNNNGKEKRSKKGDTNDGEKPREVVHVRARRGQATDSHSVAERIRRGKINER 192
           VSENGINTKNNNGK KRSKKGDT DG+KPREVVHVRARRGQATDSHSVAERIRRGKINER
Sbjct: 121 VSENGINTKNNNGKGKRSKKGDTYDGDKPREVVHVRARRGQATDSHSVAERIRRGKINER 180

Query: 193 LRCLQDIVPGCYK 203
           LRCLQDIVPGCYK
Sbjct: 181 LRCLQDIVPGCYK 191

[Close]

BLAST of Cucsat.G14156.T4 vs. NCBI nr
Match: TYJ98992.1 (transcription factor BEE 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 319 bits (818), Expect = 1.77e-107
Identity = 171/193 (88.60%), Postives = 174/193 (90.16%), Query Frame = 0


Query: 13  MADFTPNFQSLKPSSFPLMD-IDPNQNPNLNFLDNIPILFSESFFNNQTAVPSPRFLENW 72
           MADFTPNFQSLKPSSFPLMD IDPNQNPNLNFLDNIPI FS+SFFNNQTAVPSPRFLENW
Sbjct: 1   MADFTPNFQSLKPSSFPLMDHIDPNQNPNLNFLDNIPIWFSDSFFNNQTAVPSPRFLENW 60

Query: 73  GENFQGIFSHHQANQIITPTSSPVFEPKNLFGNDLHGS-KKRKLENNDAYESSSGNSTPQ 132
           GENFQGIFS  QANQIITP SSPVFEPK+ FGNDLHGS KKRKLENNDAYESSSGNSTPQ
Sbjct: 61  GENFQGIFS--QANQIITPISSPVFEPKDPFGNDLHGSIKKRKLENNDAYESSSGNSTPQ 120

Query: 133 VSENGINTKNNNGKEKRSKKGDTNDGEKPREVVHVRARRGQATDSHSVAERIRRGKINER 192
                     NNGK KRSKKGDT DG+KPREVVHVRARRGQATDSHSVAERIRRGKINER
Sbjct: 121 ----------NNGKGKRSKKGDTYDGDKPREVVHVRARRGQATDSHSVAERIRRGKINER 180

Query: 193 LRCLQDIVPGCYK 203
           LRCLQDIVPGCYK
Sbjct: 181 LRCLQDIVPGCYK 181

[Close]

BLAST of Cucsat.G14156.T4 vs. NCBI nr
Match: XP_038895237.1 (transcription factor BEE 3-like [Benincasa hispida])

HSP 1 Score: 277 bits (708), Expect = 1.34e-90
Identity = 159/199 (79.90%), Postives = 167/199 (83.92%), Query Frame = 0


Query: 13  MADFTPNFQSLKPSSFPLMDIDPNQNPNL------NFLDN-IPILFSESFFNNQT-AVPS 72
           MA+FTPNFQSL  SSFPLMD +PNQNP L      N LDN IP+LF++SFF+NQT A P 
Sbjct: 1   MAEFTPNFQSLNQSSFPLMD-NPNQNPTLLHNPKVNILDNNIPVLFNDSFFSNQTVAHPP 60

Query: 73  PRFLENWGENFQGIFSHHQANQIITPTSSPVFEPKNLFGNDLHGSKKRKLENNDAYESSS 132
           PRFLENW ENFQG F   QANQ ITP SSPVFEP +  GNDLHGSKKRKLE  DAYESSS
Sbjct: 61  PRFLENWAENFQGFFC--QANQ-ITP-SSPVFEPTHPLGNDLHGSKKRKLET-DAYESSS 120

Query: 133 GNSTPQVSENGINTKNNNGKEKRSKKGDTNDGEKPREVVHVRARRGQATDSHSVAERIRR 192
           GNSTPQ+SENGI TKNN GK KRSKKGD NDGE PREVVHVRARRGQATDSHSVAERIRR
Sbjct: 121 GNSTPQISENGIKTKNNAGKGKRSKKGDENDGENPREVVHVRARRGQATDSHSVAERIRR 180

Query: 193 GKINERLRCLQDIVPGCYK 203
           GKINERLRCLQDIVPGCYK
Sbjct: 181 GKINERLRCLQDIVPGCYK 193

[Close]

BLAST of Cucsat.G14156.T4 vs. NCBI nr
Match: XP_023520006.1 (transcription factor BEE 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 260 bits (665), Expect = 1.99e-84
Identity = 144/191 (75.39%), Postives = 158/191 (82.72%), Query Frame = 0


Query: 13  MADFTPNFQSLKPSSFPLMDIDPNQNPNLNFLDNIPILFSESFFNNQTAVPSPRFLENWG 72
           MA+FT NFQSLKPS FPLMD+DPNQ P+LNFLDNIP+LF++SFF NQ AVP PRF E WG
Sbjct: 1   MAEFTANFQSLKPSPFPLMDMDPNQIPSLNFLDNIPVLFNDSFFGNQVAVP-PRFPEIWG 60

Query: 73  ENFQGIFSHHQANQIITPTSSPVFEPKNLFGNDLHGSKKRKLENNDAYESSSGNSTPQVS 132
           ENF       QANQI    ++PVFEP N  GNDLHGSKKR+L+N +A ESSSGNSTPQ  
Sbjct: 61  ENFC------QANQI----TAPVFEPTNPSGNDLHGSKKRRLQN-EASESSSGNSTPQ-- 120

Query: 133 ENGINTKNNNGKEKRSKKGDTNDGEKPREVVHVRARRGQATDSHSVAERIRRGKINERLR 192
                TKNN+GK KRSKKGD NDGEKPREVVHVRA+RGQATDSHS+AERIRRGKINERLR
Sbjct: 121 -----TKNNSGKGKRSKKGDENDGEKPREVVHVRAKRGQATDSHSIAERIRRGKINERLR 172

Query: 193 CLQDIVPGCYK 203
           CLQDIVPGCYK
Sbjct: 181 CLQDIVPGCYK 172

[Close]

BLAST of Cucsat.G14156.T4 vs. ExPASy TrEMBL
Match: A0A0A0LTN3 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G042340 PE=4 SV=1)

HSP 1 Score: 382 bits (980), Expect = 2.76e-132
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0


Query: 13  MADFTPNFQSLKPSSFPLMDIDPNQNPNLNFLDNIPILFSESFFNNQTAVPSPRFLENWG 72
           MADFTPNFQSLKPSSFPLMDIDPNQNPNLNFLDNIPILFSESFFNNQTAVPSPRFLENWG
Sbjct: 1   MADFTPNFQSLKPSSFPLMDIDPNQNPNLNFLDNIPILFSESFFNNQTAVPSPRFLENWG 60

Query: 73  ENFQGIFSHHQANQIITPTSSPVFEPKNLFGNDLHGSKKRKLENNDAYESSSGNSTPQVS 132
           ENFQGIFSHHQANQIITPTSSPVFEPKNLFGNDLHGSKKRKLENNDAYESSSGNSTPQVS
Sbjct: 61  ENFQGIFSHHQANQIITPTSSPVFEPKNLFGNDLHGSKKRKLENNDAYESSSGNSTPQVS 120

Query: 133 ENGINTKNNNGKEKRSKKGDTNDGEKPREVVHVRARRGQATDSHSVAERIRRGKINERLR 192
           ENGINTKNNNGKEKRSKKGDTNDGEKPREVVHVRARRGQATDSHSVAERIRRGKINERLR
Sbjct: 121 ENGINTKNNNGKEKRSKKGDTNDGEKPREVVHVRARRGQATDSHSVAERIRRGKINERLR 180

Query: 193 CLQDIVPGCYK 203
           CLQDIVPGCYK
Sbjct: 181 CLQDIVPGCYK 191

[Close]

BLAST of Cucsat.G14156.T4 vs. ExPASy TrEMBL
Match: A0A1S3C7K3 (transcription factor BEE 3-like OS=Cucumis melo OX=3656 GN=LOC103497739 PE=4 SV=1)

HSP 1 Score: 344 bits (882), Expect = 2.21e-117
Identity = 181/193 (93.78%), Postives = 184/193 (95.34%), Query Frame = 0


Query: 13  MADFTPNFQSLKPSSFPLMD-IDPNQNPNLNFLDNIPILFSESFFNNQTAVPSPRFLENW 72
           MADFTPNFQSLKPSSFPLMD IDPNQNPNLNFLDNIPI FS+SFFNNQTAVPSPRFLENW
Sbjct: 1   MADFTPNFQSLKPSSFPLMDHIDPNQNPNLNFLDNIPIWFSDSFFNNQTAVPSPRFLENW 60

Query: 73  GENFQGIFSHHQANQIITPTSSPVFEPKNLFGNDLHGS-KKRKLENNDAYESSSGNSTPQ 132
           GENFQGIFS  QANQIITP SSPVFEPK+ FGNDLHGS KKRKLENNDAYESSSGNSTPQ
Sbjct: 61  GENFQGIFS--QANQIITPISSPVFEPKDPFGNDLHGSIKKRKLENNDAYESSSGNSTPQ 120

Query: 133 VSENGINTKNNNGKEKRSKKGDTNDGEKPREVVHVRARRGQATDSHSVAERIRRGKINER 192
           VSENGINTKNNNGK KRSKKGDT DG+KPREVVHVRARRGQATDSHSVAERIRRGKINER
Sbjct: 121 VSENGINTKNNNGKGKRSKKGDTYDGDKPREVVHVRARRGQATDSHSVAERIRRGKINER 180

Query: 193 LRCLQDIVPGCYK 203
           LRCLQDIVPGCYK
Sbjct: 181 LRCLQDIVPGCYK 191

[Close]

BLAST of Cucsat.G14156.T4 vs. ExPASy TrEMBL
Match: A0A5D3BGV3 (Transcription factor BEE 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G001960 PE=4 SV=1)

HSP 1 Score: 319 bits (818), Expect = 8.56e-108
Identity = 171/193 (88.60%), Postives = 174/193 (90.16%), Query Frame = 0


Query: 13  MADFTPNFQSLKPSSFPLMD-IDPNQNPNLNFLDNIPILFSESFFNNQTAVPSPRFLENW 72
           MADFTPNFQSLKPSSFPLMD IDPNQNPNLNFLDNIPI FS+SFFNNQTAVPSPRFLENW
Sbjct: 1   MADFTPNFQSLKPSSFPLMDHIDPNQNPNLNFLDNIPIWFSDSFFNNQTAVPSPRFLENW 60

Query: 73  GENFQGIFSHHQANQIITPTSSPVFEPKNLFGNDLHGS-KKRKLENNDAYESSSGNSTPQ 132
           GENFQGIFS  QANQIITP SSPVFEPK+ FGNDLHGS KKRKLENNDAYESSSGNSTPQ
Sbjct: 61  GENFQGIFS--QANQIITPISSPVFEPKDPFGNDLHGSIKKRKLENNDAYESSSGNSTPQ 120

Query: 133 VSENGINTKNNNGKEKRSKKGDTNDGEKPREVVHVRARRGQATDSHSVAERIRRGKINER 192
                     NNGK KRSKKGDT DG+KPREVVHVRARRGQATDSHSVAERIRRGKINER
Sbjct: 121 ----------NNGKGKRSKKGDTYDGDKPREVVHVRARRGQATDSHSVAERIRRGKINER 180

Query: 193 LRCLQDIVPGCYK 203
           LRCLQDIVPGCYK
Sbjct: 181 LRCLQDIVPGCYK 181

[Close]

BLAST of Cucsat.G14156.T4 vs. ExPASy TrEMBL
Match: A0A6J1E843 (transcription factor BEE 3-like OS=Cucurbita moschata OX=3662 GN=LOC111431605 PE=4 SV=1)

HSP 1 Score: 258 bits (660), Expect = 5.54e-84
Identity = 143/191 (74.87%), Postives = 158/191 (82.72%), Query Frame = 0


Query: 13  MADFTPNFQSLKPSSFPLMDIDPNQNPNLNFLDNIPILFSESFFNNQTAVPSPRFLENWG 72
           MA+FT NFQSLKPS FPLMD+DPNQ P+LNFLDNIP+LF++SFF NQ AVP PRF E WG
Sbjct: 1   MAEFTANFQSLKPSPFPLMDMDPNQIPSLNFLDNIPVLFNDSFFGNQAAVP-PRFPEIWG 60

Query: 73  ENFQGIFSHHQANQIITPTSSPVFEPKNLFGNDLHGSKKRKLENNDAYESSSGNSTPQVS 132
           ENF       QANQI    ++PVFEP N  G+DLHGSKKR+L+N +A ESSSGNSTPQ  
Sbjct: 61  ENFC------QANQI----TAPVFEPTNPSGSDLHGSKKRRLQN-EASESSSGNSTPQ-- 120

Query: 133 ENGINTKNNNGKEKRSKKGDTNDGEKPREVVHVRARRGQATDSHSVAERIRRGKINERLR 192
                TKNN+GK KRSKKGD NDGEKPREVVHVRA+RGQATDSHS+AERIRRGKINERLR
Sbjct: 121 -----TKNNSGKGKRSKKGDENDGEKPREVVHVRAKRGQATDSHSIAERIRRGKINERLR 172

Query: 193 CLQDIVPGCYK 203
           CLQDIVPGCYK
Sbjct: 181 CLQDIVPGCYK 172

[Close]

BLAST of Cucsat.G14156.T4 vs. ExPASy TrEMBL
Match: A0A6J1KP48 (transcription factor BEE 3-like OS=Cucurbita maxima OX=3661 GN=LOC111495243 PE=4 SV=1)

HSP 1 Score: 254 bits (648), Expect = 3.68e-82
Identity = 142/191 (74.35%), Postives = 155/191 (81.15%), Query Frame = 0


Query: 13  MADFTPNFQSLKPSSFPLMDIDPNQNPNLNFLDNIPILFSESFFNNQTAVPSPRFLENWG 72
           MA+FT NFQSLKPS FPLMDIDPNQ P+LNF DNIP+LF++SFF NQ AVP PRF E WG
Sbjct: 1   MAEFTANFQSLKPSPFPLMDIDPNQIPSLNFPDNIPVLFNDSFFGNQAAVP-PRFPEIWG 60

Query: 73  ENFQGIFSHHQANQIITPTSSPVFEPKNLFGNDLHGSKKRKLENNDAYESSSGNSTPQVS 132
           ENF       QANQI    ++PVFEP N  GNDLHGSKKR+L+N +A ESSSGNSTPQ  
Sbjct: 61  ENFC------QANQI----TAPVFEPTNPSGNDLHGSKKRRLQN-EASESSSGNSTPQ-- 120

Query: 133 ENGINTKNNNGKEKRSKKGDTNDGEKPREVVHVRARRGQATDSHSVAERIRRGKINERLR 192
                TKNN+GK KR KKGD ND EKPREVVHVRA+RGQATDSHS+AERIRRGKINERLR
Sbjct: 121 -----TKNNSGKGKRLKKGDENDDEKPREVVHVRAKRGQATDSHSIAERIRRGKINERLR 172

Query: 193 CLQDIVPGCYK 203
           CLQDIVPGCYK
Sbjct: 181 CLQDIVPGCYK 172

The following BLAST results are available for this feature:

BLAST of Cucsat.G14156.T4 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GWK7	4.2e-22	42.79	Transcription factor BEE 3 OS=Arabidopsis thaliana OX=3702 GN=BEE3 PE=2 SV=1	[more]
Q8GZ13	2.3e-20	42.05	Transcription factor BEE 1 OS=Arabidopsis thaliana OX=3702 GN=BEE1 PE=1 SV=1	[more]
A4D998	7.0e-17	50.00	Transcription factor bHLH75 OS=Arabidopsis thaliana OX=3702 GN=BHLH75 PE=2 SV=1	[more]
Q9SRT2	2.7e-13	37.65	Transcription factor bHLH62 OS=Arabidopsis thaliana OX=3702 GN=BHLH62 PE=2 SV=1	[more]
Q9LV17	1.0e-12	32.50	Transcription factor bHLH79 OS=Arabidopsis thaliana OX=3702 GN=BHLH79 PE=1 SV=1	[more]

BLAST of Cucsat.G14156.T4 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137476.1	5.70e-132	100.00	transcription factor BEE 3 [Cucumis sativus] >KGN64122.1 hypothetical protein Cs...	[more]
XP_008458311.1	4.56e-117	93.78	PREDICTED: transcription factor BEE 3-like [Cucumis melo]	[more]
TYJ98992.1	1.77e-107	88.60	transcription factor BEE 3-like [Cucumis melo var. makuwa]	[more]
XP_038895237.1	1.34e-90	79.90	transcription factor BEE 3-like [Benincasa hispida]	[more]
XP_023520006.1	1.99e-84	75.39	transcription factor BEE 3-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cucsat.G14156.T4 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTN3	2.76e-132	100.00	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G042340 PE=4 S...	[more]
A0A1S3C7K3	2.21e-117	93.78	transcription factor BEE 3-like OS=Cucumis melo OX=3656 GN=LOC103497739 PE=4 SV=...	[more]
A0A5D3BGV3	8.56e-108	88.60	Transcription factor BEE 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A6J1E843	5.54e-84	74.87	transcription factor BEE 3-like OS=Cucurbita moschata OX=3662 GN=LOC111431605 PE...	[more]
A0A6J1KP48	3.68e-82	74.35	transcription factor BEE 3-like OS=Cucurbita maxima OX=3661 GN=LOC111495243 PE=4...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 162..207 e-value: 3.4E-7 score: 32.0
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 169..203
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..139
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..180
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..180
None	No IPR available	PANTHER	PTHR12565:SF340	TRANSCRIPTION FACTOR BEE 1	coord: 14..203
IPR024097	Basic helix-loop-helix leucine zipper transcription factor	PANTHER	PTHR12565	STEROL REGULATORY ELEMENT-BINDING PROTEIN	coord: 14..203
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 171..207 score: 11.020006

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G14156	Cucsat.G14156	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G14156.T4.E1	Cucsat.G14156.T4.E1	exon
Cucsat.G14156.T4.E2	Cucsat.G14156.T4.E2	exon
Cucsat.G14156.T4.E3	Cucsat.G14156.T4.E3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G14156.T4.C3	Cucsat.G14156.T4.C3	CDS
Cucsat.G14156.T4.C2	Cucsat.G14156.T4.C2	CDS
Cucsat.G14156.T4.C1	Cucsat.G14156.T4.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G14156.T4	Cucsat.G14156.T4-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0003700	DNA-binding transcription factor activity