Cucsat.G13479.T9 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G13479.T9
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Tudor domain-containing protein
Location	ctg1838: 7462091 .. 7463818 (+)
RNA-Seq Expression	Cucsat.G13479.T9
Synteny	Cucsat.G13479.T9

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TACTTGTTATGTCAGTGTTTTTTTCTTATTTTGTGCACAATATTACTTTGTTTGTATATATTTAATTGACAATTGGGAAATGCGTCTTGTCCTTTTTCCAGCCTCCTCTTTGGGAAACCTATCAACAGCAATTAAAAGATTGGGAGTGTACAATTAACAAAAGCAACACCAGTTTCTGCAATGGATATCATGAGAAGGCTGCATCAGTTGAGAAACCACCAATGTTTGCATTCTGTTTGAAACCTCGTGGCTTGGAAGTCTTCAATAAAGGCTCTAAGCAAAGGTCGCACCGGAAGTTTTCGGTGTCTGGTCATAGCAACTCCATCGCTTATGATAATGATGGATTGCATGGTTTTGGTAAATTCTGTTGTCCATTTTTCCCAATCCATCTAATTACTGTTGTTTATCTCGGACGACGTTTGAAGATGTTCTTTTGTAGTTATCGATTTTCTTGACTTGGCTTTACAGTTTAAGTTGGTTTGTTGTATCAGGTAGAAGATTGAATGGGTTTAGCCTTGGGGACGACAAGATGGCCTATATTGGCCATAACTATGAGTTTTTGGAAGATTCTCCTTTGATTCACACGTCGTCCAGTTTATTTTCGCCACGGCTTGAAGGCGGCATTTTGAGTAATGATGGGTTGGAGAGGAATTTTCTACCAAAACTTCACAAGAGCAAGTCCAGGAAGTATGGGGCATGGGCTTCTACATACGACTCGGGAATGGCTTCCTTCAATCAGAGAATGATTGGAAAGAGAGACGGGCTAAATAGGTGGAACAATGGTTATTCTGAGTGGTCAAGCCCACGACGTTATCCATTTGACGGATCTCAAAGGCAGATCCTCGAACAATTGGAGGGTTCCGATGTTGACGAGTTCAGGCTCCGCGATGCATCTGGTGCTGCTCAACATGCACGCAATATGGCTAAGCTGAAGAGAGAGAAGGCCAGGCGATTGCTATACAGAGCGGACCTTGCGATTCACAAGGCAGTGGTCGCTATCATGACCGCCGAAGCAATGAAAGCTGCTTCCGAGGATGACTCCAATGGTGATGGATAAAGAAGCAAAGAGAACACGAAACCTGATGACCACCACAACTTCCTCCGATTGCTCGAGCTCACTGATTCTTACGCCAAGATGGCAAGCGGATTAGGTTCGACGATTTTGTTAGTGCTGGGTTTTGTTTACTTTTGTCAATGGTACAGCTTCTTTTTTTTCGATAATGTGCAGATTTAATTGCAAACTTCTGACACGACAAACGCGAGCCGTACGATGATATTGAGAATTTGTTGCTACAGCTTCCCAGATCCACAAGGAAGGTTTTTTTAGGCCAGCATGATTGAGAGGAGTCCCCTCATTTCAGTGCAAAACATTGTACTGAATGAAGCAAGTTTTTAGGTGGGGTTGTATGGAATTTTTTAGGGTTCCCCATATTTGTACAGTTTTTCCCCCATCTTACCCTGTTATTTTCTTTCACTTTGCCCCCTAAAAGCTCCCTCTTTTCTCTCCTTAACCCCCTTCAGTTTCTAAAGTGTTCCATCCATCAAATGAGCATCTTTAGCTTTAAATAATACATCATCTCTTCAATGCCATTGCATATTTCTCTGTAAATACAAACTCTACTGTTTATGCTATATTACTACTCTGATGATGCTTCTCAGAGATTTATTTTTCCACAAATTATTACTATTTTTTTAGTTCTACAGACCATTGTTGATTGTAAAGTGTAT

Coding sequence (CDS)

ATGTTTGCATTCTGTTTGAAACCTCGTGGCTTGGAAGTCTTCAATAAAGGCTCTAAGCAAAGGTCGCACCGGAAGTTTTCGGTGTCTGGTCATAGCAACTCCATCGCTTATGATAATGATGGATTGCATGGTTTTGGTAGAAGATTGAATGGGTTTAGCCTTGGGGACGACAAGATGGCCTATATTGGCCATAACTATGAGTTTTTGGAAGATTCTCCTTTGATTCACACGTCGTCCAGTTTATTTTCGCCACGGCTTGAAGGCGGCATTTTGAGTAATGATGGGTTGGAGAGGAATTTTCTACCAAAACTTCACAAGAGCAAGTCCAGGAAGTATGGGGCATGGGCTTCTACATACGACTCGGGAATGGCTTCCTTCAATCAGAGAATGATTGGAAAGAGAGACGGGCTAAATAGGTGGAACAATGGTTATTCTGAGTGGTCAAGCCCACGACGTTATCCATTTGACGGATCTCAAAGGCAGATCCTCGAACAATTGGAGGGTTCCGATGTTGACGAGTTCAGGCTCCGCGATGCATCTGGTGCTGCTCAACATGCACGCAATATGGCTAAGCTGAAGAGAGAGAAGGCCAGGCGATTGCTATACAGAGCGGACCTTGCGATTCACAAGGCAGTGGTCGCTATCATGACCGCCGAAGCAATGAAAGCTGCTTCCGAGGATGACTCCAATGGTGATGGATAA

Protein sequence

MFAFCLKPRGLEVFNKGSKQRSHRKFSVSGHSNSIAYDNDGLHGFGRRLNGFSLGDDKMAYIGHNYEFLEDSPLIHTSSSLFSPRLEGGILSNDGLERNFLPKLHKSKSRKYGAWASTYDSGMASFNQRMIGKRDGLNRWNNGYSEWSSPRRYPFDGSQRQILEQLEGSDVDEFRLRDASGAAQHARNMAKLKREKARRLLYRADLAIHKAVVAIMTAEAMKAASEDDSNGDG

Homology

[Close]

BLAST of Cucsat.G13479.T9 vs. NCBI nr
Match: XP_011652501.2 (uncharacterized protein LOC101216141 [Cucumis sativus] >XP_011652502.2 uncharacterized protein LOC101216141 [Cucumis sativus] >KGN60269.2 hypothetical protein Csa_000725 [Cucumis sativus])

HSP 1 Score: 467 bits (1202), Expect = 3.95e-150
Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0


Query: 1    MFAFCLKPRGLEVFNKGSKQRSHRKFSVSGHSNSIAYDNDGLHGFGRRLNGFSLGDDKMA 60
            MFAFCLKPRGLEVFNKGSKQRSHRKFSVSGHSNSIAYDNDGLHGFGRRLNGFSLGDDKMA
Sbjct: 1451 MFAFCLKPRGLEVFNKGSKQRSHRKFSVSGHSNSIAYDNDGLHGFGRRLNGFSLGDDKMA 1510

Query: 61   YIGHNYEFLEDSPLIHTSSSLFSPRLEGGILSNDGLERNFLPKLHKSKSRKYGAWASTYD 120
            YIGHNYEFLEDSPLIHTSSSLFSPRLEGGILSNDGLERNFLPKLHKSKSRKYGAWASTYD
Sbjct: 1511 YIGHNYEFLEDSPLIHTSSSLFSPRLEGGILSNDGLERNFLPKLHKSKSRKYGAWASTYD 1570

Query: 121  SGMASFNQRMIGKRDGLNRWNNGYSEWSSPRRYPFDGSQRQILEQLEGSDVDEFRLRDAS 180
            SGMASFNQRMIGKRDGLNRWNNGYSEWSSPRRYPFDGSQRQILEQLEGSDVDEFRLRDAS
Sbjct: 1571 SGMASFNQRMIGKRDGLNRWNNGYSEWSSPRRYPFDGSQRQILEQLEGSDVDEFRLRDAS 1630

Query: 181  GAAQHARNMAKLKREKARRLLYRADLAIHKAVVAIMTAEAMKAASEDDSNGDG 233
            GAAQHARNMAKLKREKARRLLYRADLAIHKAVVAIMTAEAMKAASEDDSNGDG
Sbjct: 1631 GAAQHARNMAKLKREKARRLLYRADLAIHKAVVAIMTAEAMKAASEDDSNGDG 1683

[Close]

BLAST of Cucsat.G13479.T9 vs. NCBI nr
Match: KAA0038785.1 (Enhancer of polycomb-like transcription factor protein, putative isoform 1 [Cucumis melo var. makuwa])

HSP 1 Score: 461 bits (1187), Expect = 4.47e-148
Identity = 230/233 (98.71%), Postives = 232/233 (99.57%), Query Frame = 0


Query: 1    MFAFCLKPRGLEVFNKGSKQRSHRKFSVSGHSNSIAYDNDGLHGFGRRLNGFSLGDDKMA 60
            MFAFCLKPRGLEVFNKGSKQRSHRKFSVSGHSNSIAYD++GLHGFGRRLNGFSLGDDKMA
Sbjct: 1433 MFAFCLKPRGLEVFNKGSKQRSHRKFSVSGHSNSIAYDHEGLHGFGRRLNGFSLGDDKMA 1492

Query: 61   YIGHNYEFLEDSPLIHTSSSLFSPRLEGGILSNDGLERNFLPKLHKSKSRKYGAWASTYD 120
            YIGHNYEFLEDSPLIHTSSSLFSPRLEGGILSNDGLERNFLPKLHKSKSRKYGAWAS YD
Sbjct: 1493 YIGHNYEFLEDSPLIHTSSSLFSPRLEGGILSNDGLERNFLPKLHKSKSRKYGAWASPYD 1552

Query: 121  SGMASFNQRMIGKRDGLNRWNNGYSEWSSPRRYPFDGSQRQILEQLEGSDVDEFRLRDAS 180
            SGMASFNQRMIGKRDGLNRWNNGYSEWSSPRRYPFDGSQRQILEQLEGSDVDEFRLRDAS
Sbjct: 1553 SGMASFNQRMIGKRDGLNRWNNGYSEWSSPRRYPFDGSQRQILEQLEGSDVDEFRLRDAS 1612

Query: 181  GAAQHARNMAKLKREKARRLLYRADLAIHKAVVAIMTAEAMKAASEDDSNGDG 233
            GAAQHARNMAKLKREKARRLLYRADLAIHKAVVAIMTAEAMKAASEDDSNGDG
Sbjct: 1613 GAAQHARNMAKLKREKARRLLYRADLAIHKAVVAIMTAEAMKAASEDDSNGDG 1665

[Close]

BLAST of Cucsat.G13479.T9 vs. NCBI nr
Match: TYK31405.1 (Enhancer of polycomb-like transcription factor protein, putative isoform 1 [Cucumis melo var. makuwa])

HSP 1 Score: 461 bits (1187), Expect = 4.70e-148
Identity = 230/233 (98.71%), Postives = 232/233 (99.57%), Query Frame = 0


Query: 1    MFAFCLKPRGLEVFNKGSKQRSHRKFSVSGHSNSIAYDNDGLHGFGRRLNGFSLGDDKMA 60
            MFAFCLKPRGLEVFNKGSKQRSHRKFSVSGHSNSIAYD++GLHGFGRRLNGFSLGDDKMA
Sbjct: 1437 MFAFCLKPRGLEVFNKGSKQRSHRKFSVSGHSNSIAYDHEGLHGFGRRLNGFSLGDDKMA 1496

Query: 61   YIGHNYEFLEDSPLIHTSSSLFSPRLEGGILSNDGLERNFLPKLHKSKSRKYGAWASTYD 120
            YIGHNYEFLEDSPLIHTSSSLFSPRLEGGILSNDGLERNFLPKLHKSKSRKYGAWAS YD
Sbjct: 1497 YIGHNYEFLEDSPLIHTSSSLFSPRLEGGILSNDGLERNFLPKLHKSKSRKYGAWASPYD 1556

Query: 121  SGMASFNQRMIGKRDGLNRWNNGYSEWSSPRRYPFDGSQRQILEQLEGSDVDEFRLRDAS 180
            SGMASFNQRMIGKRDGLNRWNNGYSEWSSPRRYPFDGSQRQILEQLEGSDVDEFRLRDAS
Sbjct: 1557 SGMASFNQRMIGKRDGLNRWNNGYSEWSSPRRYPFDGSQRQILEQLEGSDVDEFRLRDAS 1616

Query: 181  GAAQHARNMAKLKREKARRLLYRADLAIHKAVVAIMTAEAMKAASEDDSNGDG 233
            GAAQHARNMAKLKREKARRLLYRADLAIHKAVVAIMTAEAMKAASEDDSNGDG
Sbjct: 1617 GAAQHARNMAKLKREKARRLLYRADLAIHKAVVAIMTAEAMKAASEDDSNGDG 1669

[Close]

BLAST of Cucsat.G13479.T9 vs. NCBI nr
Match: XP_008466363.2 (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103503793 [Cucumis melo])

HSP 1 Score: 461 bits (1187), Expect = 5.36e-148
Identity = 230/233 (98.71%), Postives = 232/233 (99.57%), Query Frame = 0


Query: 1    MFAFCLKPRGLEVFNKGSKQRSHRKFSVSGHSNSIAYDNDGLHGFGRRLNGFSLGDDKMA 60
            MFAFCLKPRGLEVFNKGSKQRSHRKFSVSGHSNSIAYD++GLHGFGRRLNGFSLGDDKMA
Sbjct: 1448 MFAFCLKPRGLEVFNKGSKQRSHRKFSVSGHSNSIAYDHEGLHGFGRRLNGFSLGDDKMA 1507

Query: 61   YIGHNYEFLEDSPLIHTSSSLFSPRLEGGILSNDGLERNFLPKLHKSKSRKYGAWASTYD 120
            YIGHNYEFLEDSPLIHTSSSLFSPRLEGGILSNDGLERNFLPKLHKSKSRKYGAWAS YD
Sbjct: 1508 YIGHNYEFLEDSPLIHTSSSLFSPRLEGGILSNDGLERNFLPKLHKSKSRKYGAWASPYD 1567

Query: 121  SGMASFNQRMIGKRDGLNRWNNGYSEWSSPRRYPFDGSQRQILEQLEGSDVDEFRLRDAS 180
            SGMASFNQRMIGKRDGLNRWNNGYSEWSSPRRYPFDGSQRQILEQLEGSDVDEFRLRDAS
Sbjct: 1568 SGMASFNQRMIGKRDGLNRWNNGYSEWSSPRRYPFDGSQRQILEQLEGSDVDEFRLRDAS 1627

Query: 181  GAAQHARNMAKLKREKARRLLYRADLAIHKAVVAIMTAEAMKAASEDDSNGDG 233
            GAAQHARNMAKLKREKARRLLYRADLAIHKAVVAIMTAEAMKAASEDDSNGDG
Sbjct: 1628 GAAQHARNMAKLKREKARRLLYRADLAIHKAVVAIMTAEAMKAASEDDSNGDG 1680

[Close]

BLAST of Cucsat.G13479.T9 vs. NCBI nr
Match: XP_038899509.1 (uncharacterized protein LOC120086788 [Benincasa hispida] >XP_038899510.1 uncharacterized protein LOC120086788 [Benincasa hispida] >XP_038899511.1 uncharacterized protein LOC120086788 [Benincasa hispida])

HSP 1 Score: 444 bits (1141), Expect = 1.91e-141
Identity = 223/234 (95.30%), Postives = 228/234 (97.44%), Query Frame = 0


Query: 1    MFAFCLKPRGLEVFNKGSKQRSHRKFSVSGHSNSIAYDNDGLHGFGRRLNGFSLGDDKMA 60
            MFAFCLKPRGLEVFNKGSKQRSHRKFSV+ HSNS+AYD DGLHGFGRRLNGF+LGDDKMA
Sbjct: 1444 MFAFCLKPRGLEVFNKGSKQRSHRKFSVAAHSNSMAYDQDGLHGFGRRLNGFALGDDKMA 1503

Query: 61   YIGHNYEFLEDSPLIHTSSSLFSPRLEGGILSNDGLERNFLPKLHKSKSRKYGAWASTYD 120
            YIGHNYEF EDSPLIHTSSSLFSPRLEGGILSNDGLERNFLPKLHKSKSRKYGAW+S YD
Sbjct: 1504 YIGHNYEFSEDSPLIHTSSSLFSPRLEGGILSNDGLERNFLPKLHKSKSRKYGAWSSPYD 1563

Query: 121  SGMAS-FNQRMIGKRDGLNRWNNGYSEWSSPRRYPFDGSQRQILEQLEGSDVDEFRLRDA 180
            SGMAS FNQRMIGKRDGLNRWNNGYSEWSS RRYPFDGSQRQILEQLEGSD+DEFRLRDA
Sbjct: 1564 SGMASSFNQRMIGKRDGLNRWNNGYSEWSSLRRYPFDGSQRQILEQLEGSDLDEFRLRDA 1623

Query: 181  SGAAQHARNMAKLKREKARRLLYRADLAIHKAVVAIMTAEAMKAASEDDSNGDG 233
            SGAAQHARNMAKLKREKARRLLYRADLAIHKAVVAIMTAEAMKAASEDDSNGDG
Sbjct: 1624 SGAAQHARNMAKLKREKARRLLYRADLAIHKAVVAIMTAEAMKAASEDDSNGDG 1677

[Close]

BLAST of Cucsat.G13479.T9 vs. ExPASy TrEMBL
Match: A0A0A0LJD1 (Tudor domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G879490 PE=4 SV=1)

HSP 1 Score: 467 bits (1202), Expect = 1.76e-150
Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0


Query: 1    MFAFCLKPRGLEVFNKGSKQRSHRKFSVSGHSNSIAYDNDGLHGFGRRLNGFSLGDDKMA 60
            MFAFCLKPRGLEVFNKGSKQRSHRKFSVSGHSNSIAYDNDGLHGFGRRLNGFSLGDDKMA
Sbjct: 1444 MFAFCLKPRGLEVFNKGSKQRSHRKFSVSGHSNSIAYDNDGLHGFGRRLNGFSLGDDKMA 1503

Query: 61   YIGHNYEFLEDSPLIHTSSSLFSPRLEGGILSNDGLERNFLPKLHKSKSRKYGAWASTYD 120
            YIGHNYEFLEDSPLIHTSSSLFSPRLEGGILSNDGLERNFLPKLHKSKSRKYGAWASTYD
Sbjct: 1504 YIGHNYEFLEDSPLIHTSSSLFSPRLEGGILSNDGLERNFLPKLHKSKSRKYGAWASTYD 1563

Query: 121  SGMASFNQRMIGKRDGLNRWNNGYSEWSSPRRYPFDGSQRQILEQLEGSDVDEFRLRDAS 180
            SGMASFNQRMIGKRDGLNRWNNGYSEWSSPRRYPFDGSQRQILEQLEGSDVDEFRLRDAS
Sbjct: 1564 SGMASFNQRMIGKRDGLNRWNNGYSEWSSPRRYPFDGSQRQILEQLEGSDVDEFRLRDAS 1623

Query: 181  GAAQHARNMAKLKREKARRLLYRADLAIHKAVVAIMTAEAMKAASEDDSNGDG 233
            GAAQHARNMAKLKREKARRLLYRADLAIHKAVVAIMTAEAMKAASEDDSNGDG
Sbjct: 1624 GAAQHARNMAKLKREKARRLLYRADLAIHKAVVAIMTAEAMKAASEDDSNGDG 1676

[Close]

BLAST of Cucsat.G13479.T9 vs. ExPASy TrEMBL
Match: A0A5A7TBM8 (Enhancer of polycomb-like transcription factor protein, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G003390 PE=4 SV=1)

HSP 1 Score: 461 bits (1187), Expect = 2.17e-148
Identity = 230/233 (98.71%), Postives = 232/233 (99.57%), Query Frame = 0


Query: 1    MFAFCLKPRGLEVFNKGSKQRSHRKFSVSGHSNSIAYDNDGLHGFGRRLNGFSLGDDKMA 60
            MFAFCLKPRGLEVFNKGSKQRSHRKFSVSGHSNSIAYD++GLHGFGRRLNGFSLGDDKMA
Sbjct: 1433 MFAFCLKPRGLEVFNKGSKQRSHRKFSVSGHSNSIAYDHEGLHGFGRRLNGFSLGDDKMA 1492

Query: 61   YIGHNYEFLEDSPLIHTSSSLFSPRLEGGILSNDGLERNFLPKLHKSKSRKYGAWASTYD 120
            YIGHNYEFLEDSPLIHTSSSLFSPRLEGGILSNDGLERNFLPKLHKSKSRKYGAWAS YD
Sbjct: 1493 YIGHNYEFLEDSPLIHTSSSLFSPRLEGGILSNDGLERNFLPKLHKSKSRKYGAWASPYD 1552

Query: 121  SGMASFNQRMIGKRDGLNRWNNGYSEWSSPRRYPFDGSQRQILEQLEGSDVDEFRLRDAS 180
            SGMASFNQRMIGKRDGLNRWNNGYSEWSSPRRYPFDGSQRQILEQLEGSDVDEFRLRDAS
Sbjct: 1553 SGMASFNQRMIGKRDGLNRWNNGYSEWSSPRRYPFDGSQRQILEQLEGSDVDEFRLRDAS 1612

Query: 181  GAAQHARNMAKLKREKARRLLYRADLAIHKAVVAIMTAEAMKAASEDDSNGDG 233
            GAAQHARNMAKLKREKARRLLYRADLAIHKAVVAIMTAEAMKAASEDDSNGDG
Sbjct: 1613 GAAQHARNMAKLKREKARRLLYRADLAIHKAVVAIMTAEAMKAASEDDSNGDG 1665

[Close]

BLAST of Cucsat.G13479.T9 vs. ExPASy TrEMBL
Match: A0A5D3E7X0 (Enhancer of polycomb-like transcription factor protein, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007130 PE=4 SV=1)

HSP 1 Score: 461 bits (1187), Expect = 2.27e-148
Identity = 230/233 (98.71%), Postives = 232/233 (99.57%), Query Frame = 0


Query: 1    MFAFCLKPRGLEVFNKGSKQRSHRKFSVSGHSNSIAYDNDGLHGFGRRLNGFSLGDDKMA 60
            MFAFCLKPRGLEVFNKGSKQRSHRKFSVSGHSNSIAYD++GLHGFGRRLNGFSLGDDKMA
Sbjct: 1437 MFAFCLKPRGLEVFNKGSKQRSHRKFSVSGHSNSIAYDHEGLHGFGRRLNGFSLGDDKMA 1496

Query: 61   YIGHNYEFLEDSPLIHTSSSLFSPRLEGGILSNDGLERNFLPKLHKSKSRKYGAWASTYD 120
            YIGHNYEFLEDSPLIHTSSSLFSPRLEGGILSNDGLERNFLPKLHKSKSRKYGAWAS YD
Sbjct: 1497 YIGHNYEFLEDSPLIHTSSSLFSPRLEGGILSNDGLERNFLPKLHKSKSRKYGAWASPYD 1556

Query: 121  SGMASFNQRMIGKRDGLNRWNNGYSEWSSPRRYPFDGSQRQILEQLEGSDVDEFRLRDAS 180
            SGMASFNQRMIGKRDGLNRWNNGYSEWSSPRRYPFDGSQRQILEQLEGSDVDEFRLRDAS
Sbjct: 1557 SGMASFNQRMIGKRDGLNRWNNGYSEWSSPRRYPFDGSQRQILEQLEGSDVDEFRLRDAS 1616

Query: 181  GAAQHARNMAKLKREKARRLLYRADLAIHKAVVAIMTAEAMKAASEDDSNGDG 233
            GAAQHARNMAKLKREKARRLLYRADLAIHKAVVAIMTAEAMKAASEDDSNGDG
Sbjct: 1617 GAAQHARNMAKLKREKARRLLYRADLAIHKAVVAIMTAEAMKAASEDDSNGDG 1669

[Close]

BLAST of Cucsat.G13479.T9 vs. ExPASy TrEMBL
Match: A0A1S3CR90 (LOW QUALITY PROTEIN: uncharacterized protein LOC103503793 OS=Cucumis melo OX=3656 GN=LOC103503793 PE=4 SV=1)

HSP 1 Score: 461 bits (1187), Expect = 2.60e-148
Identity = 230/233 (98.71%), Postives = 232/233 (99.57%), Query Frame = 0


Query: 1    MFAFCLKPRGLEVFNKGSKQRSHRKFSVSGHSNSIAYDNDGLHGFGRRLNGFSLGDDKMA 60
            MFAFCLKPRGLEVFNKGSKQRSHRKFSVSGHSNSIAYD++GLHGFGRRLNGFSLGDDKMA
Sbjct: 1448 MFAFCLKPRGLEVFNKGSKQRSHRKFSVSGHSNSIAYDHEGLHGFGRRLNGFSLGDDKMA 1507

Query: 61   YIGHNYEFLEDSPLIHTSSSLFSPRLEGGILSNDGLERNFLPKLHKSKSRKYGAWASTYD 120
            YIGHNYEFLEDSPLIHTSSSLFSPRLEGGILSNDGLERNFLPKLHKSKSRKYGAWAS YD
Sbjct: 1508 YIGHNYEFLEDSPLIHTSSSLFSPRLEGGILSNDGLERNFLPKLHKSKSRKYGAWASPYD 1567

Query: 121  SGMASFNQRMIGKRDGLNRWNNGYSEWSSPRRYPFDGSQRQILEQLEGSDVDEFRLRDAS 180
            SGMASFNQRMIGKRDGLNRWNNGYSEWSSPRRYPFDGSQRQILEQLEGSDVDEFRLRDAS
Sbjct: 1568 SGMASFNQRMIGKRDGLNRWNNGYSEWSSPRRYPFDGSQRQILEQLEGSDVDEFRLRDAS 1627

Query: 181  GAAQHARNMAKLKREKARRLLYRADLAIHKAVVAIMTAEAMKAASEDDSNGDG 233
            GAAQHARNMAKLKREKARRLLYRADLAIHKAVVAIMTAEAMKAASEDDSNGDG
Sbjct: 1628 GAAQHARNMAKLKREKARRLLYRADLAIHKAVVAIMTAEAMKAASEDDSNGDG 1680

[Close]

BLAST of Cucsat.G13479.T9 vs. ExPASy TrEMBL
Match: A0A6J1BWF3 (uncharacterized protein LOC111005924 OS=Momordica charantia OX=3673 GN=LOC111005924 PE=4 SV=1)

HSP 1 Score: 412 bits (1060), Expect = 3.33e-130
Identity = 210/234 (89.74%), Postives = 219/234 (93.59%), Query Frame = 0


Query: 1    MFAFCLKPRGLEVFNKGSKQRSHRKFSVSGHSNSIAYDNDGLHGFGRRLNGFSLGDDKMA 60
            MFAFCLKPRGLEV NKGSKQRSHR+FS+SG SNSIA D DGLHGFGRRLNGF LGDDKMA
Sbjct: 1465 MFAFCLKPRGLEVSNKGSKQRSHRRFSMSGQSNSIACDPDGLHGFGRRLNGFVLGDDKMA 1524

Query: 61   YIGHNYEFLEDSPLIHTSSSLFSPRLEGGILSNDGLERNFLPKLHKSKSRKYGAWASTYD 120
            Y+G NYEFLEDSPLIH SSS+FSPRLEGGILSNDGLERNFLPKLHKSKSRKYGAW+S YD
Sbjct: 1525 YLGQNYEFLEDSPLIHASSSVFSPRLEGGILSNDGLERNFLPKLHKSKSRKYGAWSSPYD 1584

Query: 121  SGMAS-FNQRMIGKRDGLNRWNNGYSEWSSPRRYPFDGSQRQILEQLEGSDVDEFRLRDA 180
               AS FNQRMIGKRDGL+ WNNG+SEWSSPRRY  DGSQRQILEQLEGSD+DEFRLRDA
Sbjct: 1585 PMTASSFNQRMIGKRDGLSGWNNGFSEWSSPRRYHLDGSQRQILEQLEGSDLDEFRLRDA 1644

Query: 181  SGAAQHARNMAKLKREKARRLLYRADLAIHKAVVAIMTAEAMKAASEDDSNGDG 233
            SGAAQHARNMAKLKREKARRLLYRADLAIHKAVVAIMTAEA+KAASEDDSNGDG
Sbjct: 1645 SGAAQHARNMAKLKREKARRLLYRADLAIHKAVVAIMTAEAIKAASEDDSNGDG 1698

The following BLAST results are available for this feature:

BLAST of Cucsat.G13479.T9 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G13479.T9 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011652501.2	3.95e-150	100.00	uncharacterized protein LOC101216141 [Cucumis sativus] >XP_011652502.2 uncharact...	[more]
KAA0038785.1	4.47e-148	98.71	Enhancer of polycomb-like transcription factor protein, putative isoform 1 [Cucu...	[more]
TYK31405.1	4.70e-148	98.71	Enhancer of polycomb-like transcription factor protein, putative isoform 1 [Cucu...	[more]
XP_008466363.2	5.36e-148	98.71	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103503793 [Cucumis me...	[more]
XP_038899509.1	1.91e-141	95.30	uncharacterized protein LOC120086788 [Benincasa hispida] >XP_038899510.1 unchara...	[more]

BLAST of Cucsat.G13479.T9 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJD1	1.76e-150	100.00	Tudor domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G879490 PE=4 ...	[more]
A0A5A7TBM8	2.17e-148	98.71	Enhancer of polycomb-like transcription factor protein, putative isoform 1 OS=Cu...	[more]
A0A5D3E7X0	2.27e-148	98.71	Enhancer of polycomb-like transcription factor protein, putative isoform 1 OS=Cu...	[more]
A0A1S3CR90	2.60e-148	98.71	LOW QUALITY PROTEIN: uncharacterized protein LOC103503793 OS=Cucumis melo OX=365...	[more]
A0A6J1BWF3	3.33e-130	89.74	uncharacterized protein LOC111005924 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR13793:SF135	OS01G0179500 PROTEIN	coord: 1..233
None	No IPR available	PANTHER	PTHR13793	PHD FINGER PROTEINS	coord: 1..233

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G13479	Cucsat.G13479	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G13479.T9.E1	Cucsat.G13479.T9.E1	exon
Cucsat.G13479.T9.E2	Cucsat.G13479.T9.E2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G13479.T9.C1	Cucsat.G13479.T9.C1	CDS
Cucsat.G13479.T9.C2	Cucsat.G13479.T9.C2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G13479.T9	Cucsat.G13479.T9-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane