Cucsat.G13242.T6 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G13242.T6
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	MYB domain class transcription factor
Location	ctg1838: 2940026 .. 2941564 (+)
RNA-Seq Expression	Cucsat.G13242.T6
Synteny	Cucsat.G13242.T6

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAACTAAACTATGTCTGTAAACAAGTGGCAAATTATTAGGGCATTTACTCCATTTCCGAAGCCTACATCCCTTTCCTCACATAAATATATAACAAAGAAGATAAAGAAAAAAGCAAAGAATAATCTGTACGACGACAAAAATTGTGATAAATCCAAATGGGAAGGTCTCCTTACTGCGACAGCTCGGGGTTGAAGAAAGGCCCATGGACGCCTGAAGAAGATCACAAGCTCTTAGCTTACATTCACCAGCATGGCCATGGAAGCTGGCGCGCCTTGCCCTCCAAAGCCGGTACGTATACGTTTTGAATTTTCGACAACTAGGAGATCAGAAATGATTACTTTTTTTTTTCTTTCTTTTGAAAAACATATAGGTCTTGAGAGATGTGGAAAGAGTTGTAGACTTCGATGGACGAATTATCTCCGACCTGACATTAAAAGAGGAAAGTTCAGTTTGCAGGAAGAGCAAGCAATAGAACAGTTGCATGCCCTCCTTGGAAACAGGTCGATTTGTACATGAAATTGAAAATTTAACTTTAAGATCATTAGTCTTTTTTTTTTGTTTAAGAATTTTGATTTTGATGACACGGTGTTTTAGGTGGTCTGCCATAGCAACACATTTGCCAAAGAGAACAGATAACGAGATAAAAAACTATTGGAATACTCATCTGAAGAAAAAGCTGATAAAAATGGGGATAGATCCAATCACTCACAAACCAACGAAGAACAATAATGAAGAAATGAAGGTGAAAAATAATATCAATAATTCCACCCTTAGCCACATGGCTCAGTGGGAAACAGCTCGACTCGAAGCCGAAGAAAGACTCGCTCGTCAACATAAGATTCAACCAATTCCTTCTTCTTCAGGTTGTGTCAAAATCAAAAACACAAAAAATAAAATTATTGGTTTATCAAATTTCAAAATTAAAAAAACTATAAAAGTCTTAAAACCATTGACTAACCATTTCAATCTCTTTATTATTTTTTTTAATTCTGCTTTTAAATTTTTGTTTATTATAAACAAAAATCATATATGTTTGATAGTTGATTTTGTTTCTTGTTTTTAAAAACAAAATGTATTTTTCAAAGTCTTTTCAATTTACTTTCATAATTTTAAAAACAAGTTTTTAGAAAGAAAAAAGAAAAAAAAGTGAATCAAAATTACAAACACACTTCTTTAGAAATTAGTTTTTTAAAAAAAACAGAATACCAAATCGGTATAACTCTCTATATTATTATTTTTATTTTTTGCTATGAAGGCGGTGTGGAGTCCCCAACCACGTCGTCAACTGCCACCGGAAACTGCCAACATTTGGCCGGAGAGAGGGGTGTTGCCGATGATCTGCCGTCGTCGGGAAGTGGCAGCGCTGGCGAGAGCAAGAATTATGGGTGGCCGGACACAATTCTTGGTGAATTCCTGAGATTCTGATTGGGAAGTGAGTTTTTATTTTTAAGAAGGAAGAAGAAAATTACTCAAAAAATAATTATGATATAATTTTTTTAAATTTTCTTTTTTTTGGGAGATTATGAGATCTAATCTT

Coding sequence (CDS)

ATGGCCATGGAAGCTGGCGCGCCTTGCCCTCCAAAGCCGGTACGTATACGTTTTGAATTTTCGACAACTAGGAGATCAGAAATGATTACTTTTTTTTTTCTTTCTTTTGAAAAACATATAGGTCTTGAGAGATGTGGAAAGAGTTGTAGACTTCGATGGACGAATTATCTCCGACCTGACATTAAAAGAGGAAAGTTCAGTTTGCAGGAAGAGCAAGCAATAGAACAGTTGCATGCCCTCCTTGGAAACAGGTGGTCTGCCATAGCAACACATTTGCCAAAGAGAACAGATAACGAGATAAAAAACTATTGGAATACTCATCTGAAGAAAAAGCTGATAAAAATGGGGATAGATCCAATCACTCACAAACCAACGAAGAACAATAATGAAGAAATGAAGGTGAAAAATAATATCAATAATTCCACCCTTAGCCACATGGCTCAGTGGGAAACAGCTCGACTCGAAGCCGAAGAAAGACTCGCTCGTCAACATAAGATTCAACCAATTCCTTCTTCTTCAGGTTGTGTCAAAATCAAAAACACAAAAAATAAAATTATTGGTTTATCAAATTTCAAAATTAAAAAAACTATAAAAGTCTTAAAACCATTGACTAACCATTTCAATCTCTTTATTATTTTTTTTAATTCTGCTTTTAAATTTTTGTTTATTATAAACAAAAATCATATATGTTTGATAGTTGATTTTGTTTCTTGTTTTTAA

Protein sequence

MAMEAGAPCPPKPVRIRFEFSTTRRSEMITFFFLSFEKHIGLERCGKSCRLRWTNYLRPDIKRGKFSLQEEQAIEQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKKLIKMGIDPITHKPTKNNNEEMKVKNNINNSTLSHMAQWETARLEAEERLARQHKIQPIPSSSGCVKIKNTKNKIIGLSNFKIKKTIKVLKPLTNHFNLFIIFFNSAFKFLFIINKNHICLIVDFVSCF

Homology

[Close]

BLAST of Cucsat.G13242.T6 vs. ExPASy Swiss-Prot
Match: Q9LE63 (Transcription factor MYB106 OS=Arabidopsis thaliana OX=3702 GN=MYB106 PE=2 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 7.7e-52
Identity = 100/132 (75.76%), Postives = 111/132 (84.09%), Query Frame = 0


Query: 35  SFEKHIGLERCGKSCRLRWTNYLRPDIKRGKFSLQEEQAIEQLHALLGNRWSAIATHLPK 94
           S  +  GL+RCGKSCRLRWTNYLRPDIKRGKF++QEEQ I QLHALLGNRWSAIATHLPK
Sbjct: 39  SLPEKAGLQRCGKSCRLRWTNYLRPDIKRGKFTVQEEQTIIQLHALLGNRWSAIATHLPK 98

Query: 95  RTDNEIKNYWNTHLKKKLIKMGIDPITHKPTKNNNEEMKVKNNINNSTLSHMAQWETARL 154
           RTDNEIKNYWNTHLKK+LIKMGIDP+THK  KN         + N +TLSHMAQWE+ARL
Sbjct: 99  RTDNEIKNYWNTHLKKRLIKMGIDPVTHK-HKNETLSSSTGQSKNAATLSHMAQWESARL 158

Query: 155 EAEERLARQHKI 167
           EAE RLAR+ K+
Sbjct: 159 EAEARLARESKL 169

[Close]

BLAST of Cucsat.G13242.T6 vs. ExPASy Swiss-Prot
Match: Q9LXF1 (Transcription factor MYB16 OS=Arabidopsis thaliana OX=3702 GN=MYB16 PE=2 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 3.8e-51
Identity = 99/132 (75.00%), Postives = 110/132 (83.33%), Query Frame = 0


Query: 35  SFEKHIGLERCGKSCRLRWTNYLRPDIKRGKFSLQEEQAIEQLHALLGNRWSAIATHLPK 94
           S  +  GL RCGKSCRLRWTNYLRPDIKRGKF+LQEEQ I QLHALLGNRWSAIATHLPK
Sbjct: 39  SLPEKAGLHRCGKSCRLRWTNYLRPDIKRGKFNLQEEQTIIQLHALLGNRWSAIATHLPK 98

Query: 95  RTDNEIKNYWNTHLKKKLIKMGIDPITHKPTKNNNEEMKVKNNINNSTLSHMAQWETARL 154
           RTDNEIKNYWNTHLKK+L+KMGIDP+THKP KN      +  + N + LSH AQWE+ARL
Sbjct: 99  RTDNEIKNYWNTHLKKRLVKMGIDPVTHKP-KNETPLSSLGLSKNAAILSHTAQWESARL 158

Query: 155 EAEERLARQHKI 167
           EAE RLAR+ K+
Sbjct: 159 EAEARLARESKL 169

[Close]

BLAST of Cucsat.G13242.T6 vs. ExPASy Swiss-Prot
Match: Q9M2D9 (Transcription factor MYB17 OS=Arabidopsis thaliana OX=3702 GN=MYB17 PE=1 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.8e-40
Identity = 89/166 (53.61%), Postives = 113/166 (68.07%), Query Frame = 0


Query: 38  KHIGLERCGKSCRLRWTNYLRPDIKRGKFSLQEEQAIEQLHALLGNRWSAIATHLPKRTD 97
           K  GL RCGKSCRLRWTNYLRPDIKRG F+  EE+ + QLHA+LGNRW+AIA  LP RTD
Sbjct: 42  KLAGLLRCGKSCRLRWTNYLRPDIKRGPFTADEEKLVIQLHAILGNRWAAIAAQLPGRTD 101

Query: 98  NEIKNYWNTHLKKKLIKMGIDPITHKPTKNNNEEMKVKNNINNSTLSHMAQWETARLEAE 157
           NEIKN WNTHLKK+L+ MG+DP TH+P  +       K   ++ T  HMAQWE+AR+EAE
Sbjct: 102 NEIKNLWNTHLKKRLLSMGLDPRTHEPLPSYG---LAKQAPSSPTTRHMAQWESARVEAE 161

Query: 158 ERLARQHKIQPIPSSSGCVKIKNTKNKIIGLSNFKIKKTIKVLKPL 204
            RL+R+  +      SG VK +   +  + + N +I +  + L PL
Sbjct: 162 ARLSRESMLFSPSFYSGVVKTE--CDHFLRIWNSEIGEAFRNLAPL 202

[Close]

BLAST of Cucsat.G13242.T6 vs. ExPASy Swiss-Prot
Match: Q9M0Y5 (Transcription factor MYB74 OS=Arabidopsis thaliana OX=3702 GN=MYB74 PE=2 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 5.4e-37
Identity = 65/87 (74.71%), Postives = 79/87 (90.80%), Query Frame = 0


Query: 38  KHIGLERCGKSCRLRWTNYLRPDIKRGKFSLQEEQAIEQLHALLGNRWSAIATHLPKRTD 97
           K+ GL+RCGKSCRLRWTNYLRPDIKRG+FS +EE+ I QLH+++GN+WSAIA  LP RTD
Sbjct: 43  KNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSIMGNKWSAIAARLPGRTD 102

Query: 98  NEIKNYWNTHLKKKLIKMGIDPITHKP 125
           NEIKNYWNTH++K+L+KMGIDP+TH P
Sbjct: 103 NEIKNYWNTHIRKRLLKMGIDPVTHTP 129

[Close]

BLAST of Cucsat.G13242.T6 vs. ExPASy Swiss-Prot
Match: Q9S9Z2 (Transcription factor MYB93 OS=Arabidopsis thaliana OX=3702 GN=MYB93 PE=1 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.2e-36
Identity = 68/83 (81.93%), Postives = 76/83 (91.57%), Query Frame = 0


Query: 42  LERCGKSCRLRWTNYLRPDIKRGKFSLQEEQAIEQLHALLGNRWSAIATHLPKRTDNEIK 101
           L RCGKSCRLRWTNYLRPDIKRGKFS +EEQ I  LH++LGN+WSAIATHL  RTDNEIK
Sbjct: 46  LNRCGKSCRLRWTNYLRPDIKRGKFSAEEEQTILHLHSILGNKWSAIATHLQGRTDNEIK 105

Query: 102 NYWNTHLKKKLIKMGIDPITHKP 125
           N+WNTHLKKKLI+MGIDP+TH+P
Sbjct: 106 NFWNTHLKKKLIQMGIDPVTHQP 128

[Close]

BLAST of Cucsat.G13242.T6 vs. NCBI nr
Match: XP_004136689.1 (transcription factor MYB106 [Cucumis sativus] >KGN59540.1 hypothetical protein Csa_002164 [Cucumis sativus])

HSP 1 Score: 278 bits (712), Expect = 2.52e-91
Identity = 137/147 (93.20%), Postives = 139/147 (94.56%), Query Frame = 0


Query: 41  GLERCGKSCRLRWTNYLRPDIKRGKFSLQEEQAIEQLHALLGNRWSAIATHLPKRTDNEI 100
           GLERCGKSCRLRWTNYLRPDIKRGKFSLQEEQAIEQLHALLGNRWSAIATHLPKRTDNEI
Sbjct: 45  GLERCGKSCRLRWTNYLRPDIKRGKFSLQEEQAIEQLHALLGNRWSAIATHLPKRTDNEI 104

Query: 101 KNYWNTHLKKKLIKMGIDPITHKPTKNNNEEMKVKNNINNSTLSHMAQWETARLEAEERL 160
           KNYWNTHLKKKLIKMGIDPITHKPTKNNNEEMKVKNNINNSTLSHMAQWETARLEAEERL
Sbjct: 105 KNYWNTHLKKKLIKMGIDPITHKPTKNNNEEMKVKNNINNSTLSHMAQWETARLEAEERL 164

Query: 161 ARQHKIQPIPSSSGCVKIKNTKNKIIG 187
           ARQHKIQPIPSSSG V+   T +   G
Sbjct: 165 ARQHKIQPIPSSSGGVESPTTSSTATG 191

[Close]

BLAST of Cucsat.G13242.T6 vs. NCBI nr
Match: XP_008443378.1 (PREDICTED: transcription factor MYB76-like isoform X2 [Cucumis melo] >KAA0053786.1 transcription factor MYB76-like isoform X2 [Cucumis melo var. makuwa] >TYK25615.1 transcription factor MYB76-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 269 bits (687), Expect = 1.58e-87
Identity = 130/133 (97.74%), Postives = 132/133 (99.25%), Query Frame = 0


Query: 41  GLERCGKSCRLRWTNYLRPDIKRGKFSLQEEQAIEQLHALLGNRWSAIATHLPKRTDNEI 100
           GLERCGKSCRLRWTNYLRPDIKRGKFSLQEEQAIEQLHALLGNRWSAIATHLPKRTDNEI
Sbjct: 45  GLERCGKSCRLRWTNYLRPDIKRGKFSLQEEQAIEQLHALLGNRWSAIATHLPKRTDNEI 104

Query: 101 KNYWNTHLKKKLIKMGIDPITHKPTKNNNEEMKVKNNINNSTLSHMAQWETARLEAEERL 160
           KNYWNTHLKKKLIKMGIDPITHKP KNNNEEMKVK+N+NNSTLSHMAQWETARLEAEERL
Sbjct: 105 KNYWNTHLKKKLIKMGIDPITHKPMKNNNEEMKVKSNMNNSTLSHMAQWETARLEAEERL 164

Query: 161 ARQHKIQPIPSSS 173
           ARQHKIQPIPSSS
Sbjct: 165 ARQHKIQPIPSSS 177

[Close]

BLAST of Cucsat.G13242.T6 vs. NCBI nr
Match: XP_008443377.1 (PREDICTED: transcription factor MYB76-like isoform X1 [Cucumis melo])

HSP 1 Score: 269 bits (687), Expect = 1.63e-87
Identity = 130/133 (97.74%), Postives = 132/133 (99.25%), Query Frame = 0


Query: 41  GLERCGKSCRLRWTNYLRPDIKRGKFSLQEEQAIEQLHALLGNRWSAIATHLPKRTDNEI 100
           GLERCGKSCRLRWTNYLRPDIKRGKFSLQEEQAIEQLHALLGNRWSAIATHLPKRTDNEI
Sbjct: 45  GLERCGKSCRLRWTNYLRPDIKRGKFSLQEEQAIEQLHALLGNRWSAIATHLPKRTDNEI 104

Query: 101 KNYWNTHLKKKLIKMGIDPITHKPTKNNNEEMKVKNNINNSTLSHMAQWETARLEAEERL 160
           KNYWNTHLKKKLIKMGIDPITHKP KNNNEEMKVK+N+NNSTLSHMAQWETARLEAEERL
Sbjct: 105 KNYWNTHLKKKLIKMGIDPITHKPMKNNNEEMKVKSNMNNSTLSHMAQWETARLEAEERL 164

Query: 161 ARQHKIQPIPSSS 173
           ARQHKIQPIPSSS
Sbjct: 165 ARQHKIQPIPSSS 177

[Close]

BLAST of Cucsat.G13242.T6 vs. NCBI nr
Match: XP_038905812.1 (transcription factor MYB106-like [Benincasa hispida])

HSP 1 Score: 238 bits (606), Expect = 3.76e-75
Identity = 116/131 (88.55%), Postives = 122/131 (93.13%), Query Frame = 0


Query: 41  GLERCGKSCRLRWTNYLRPDIKRGKFSLQEEQAIEQLHALLGNRWSAIATHLPKRTDNEI 100
           GLERCGKSCRLRWTNYLRPDIKRGKF+ QEEQAI +LHALLGNRWSAIATHLPKRTDNEI
Sbjct: 45  GLERCGKSCRLRWTNYLRPDIKRGKFNSQEEQAIVELHALLGNRWSAIATHLPKRTDNEI 104

Query: 101 KNYWNTHLKKKLIKMGIDPITHKPTKNNNEEMKVKNNINNSTLSHMAQWETARLEAEERL 160
           KNYWNTHLKKKLIKMGIDPITHKP KNNNEE+K KN +N STLSHMAQWE ARLEAEERL
Sbjct: 105 KNYWNTHLKKKLIKMGIDPITHKPMKNNNEEIKSKNTVN-STLSHMAQWEIARLEAEERL 164

Query: 161 ARQHKIQPIPS 171
           ARQ ++QPI S
Sbjct: 165 ARQSRLQPISS 174

[Close]

BLAST of Cucsat.G13242.T6 vs. NCBI nr
Match: XP_023521692.1 (transcription factor MYB106-like [Cucurbita pepo subsp. pepo] >XP_023528732.1 transcription factor MYB106-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 234 bits (598), Expect = 2.81e-74
Identity = 116/133 (87.22%), Postives = 123/133 (92.48%), Query Frame = 0


Query: 41  GLERCGKSCRLRWTNYLRPDIKRGKFSLQEEQAIEQLHALLGNRWSAIATHLPKRTDNEI 100
           GLERCGKSCRLRWTNYLRPDIKRGKFSL EEQAI QLHALLGNRWSAIATHLPKRTDNEI
Sbjct: 45  GLERCGKSCRLRWTNYLRPDIKRGKFSLHEEQAIVQLHALLGNRWSAIATHLPKRTDNEI 104

Query: 101 KNYWNTHLKKKLIKMGIDPITHKPTKNNNEEMKVKNNINNSTLSHMAQWETARLEAEERL 160
           KNYWNTH+KKKLIKMGIDPITHKP KNN E+    NN+N STL+HMAQWETARLEAEERL
Sbjct: 105 KNYWNTHMKKKLIKMGIDPITHKPIKNNEEQ----NNMN-STLTHMAQWETARLEAEERL 164

Query: 161 ARQHKIQPIPSSS 173
           ARQ K+QPIPS++
Sbjct: 165 ARQSKLQPIPSAN 172

[Close]

BLAST of Cucsat.G13242.T6 vs. ExPASy TrEMBL
Match: A0A0A0LC22 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G824850 PE=4 SV=1)

HSP 1 Score: 278 bits (712), Expect = 1.22e-91
Identity = 137/147 (93.20%), Postives = 139/147 (94.56%), Query Frame = 0


Query: 41  GLERCGKSCRLRWTNYLRPDIKRGKFSLQEEQAIEQLHALLGNRWSAIATHLPKRTDNEI 100
           GLERCGKSCRLRWTNYLRPDIKRGKFSLQEEQAIEQLHALLGNRWSAIATHLPKRTDNEI
Sbjct: 45  GLERCGKSCRLRWTNYLRPDIKRGKFSLQEEQAIEQLHALLGNRWSAIATHLPKRTDNEI 104

Query: 101 KNYWNTHLKKKLIKMGIDPITHKPTKNNNEEMKVKNNINNSTLSHMAQWETARLEAEERL 160
           KNYWNTHLKKKLIKMGIDPITHKPTKNNNEEMKVKNNINNSTLSHMAQWETARLEAEERL
Sbjct: 105 KNYWNTHLKKKLIKMGIDPITHKPTKNNNEEMKVKNNINNSTLSHMAQWETARLEAEERL 164

Query: 161 ARQHKIQPIPSSSGCVKIKNTKNKIIG 187
           ARQHKIQPIPSSSG V+   T +   G
Sbjct: 165 ARQHKIQPIPSSSGGVESPTTSSTATG 191

[Close]

BLAST of Cucsat.G13242.T6 vs. ExPASy TrEMBL
Match: A0A5A7UHQ9 (Transcription factor MYB76-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007750 PE=4 SV=1)

HSP 1 Score: 269 bits (687), Expect = 7.64e-88
Identity = 130/133 (97.74%), Postives = 132/133 (99.25%), Query Frame = 0


Query: 41  GLERCGKSCRLRWTNYLRPDIKRGKFSLQEEQAIEQLHALLGNRWSAIATHLPKRTDNEI 100
           GLERCGKSCRLRWTNYLRPDIKRGKFSLQEEQAIEQLHALLGNRWSAIATHLPKRTDNEI
Sbjct: 45  GLERCGKSCRLRWTNYLRPDIKRGKFSLQEEQAIEQLHALLGNRWSAIATHLPKRTDNEI 104

Query: 101 KNYWNTHLKKKLIKMGIDPITHKPTKNNNEEMKVKNNINNSTLSHMAQWETARLEAEERL 160
           KNYWNTHLKKKLIKMGIDPITHKP KNNNEEMKVK+N+NNSTLSHMAQWETARLEAEERL
Sbjct: 105 KNYWNTHLKKKLIKMGIDPITHKPMKNNNEEMKVKSNMNNSTLSHMAQWETARLEAEERL 164

Query: 161 ARQHKIQPIPSSS 173
           ARQHKIQPIPSSS
Sbjct: 165 ARQHKIQPIPSSS 177

[Close]

BLAST of Cucsat.G13242.T6 vs. ExPASy TrEMBL
Match: A0A1S3B8N3 (transcription factor MYB76-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486978 PE=4 SV=1)

HSP 1 Score: 269 bits (687), Expect = 7.64e-88
Identity = 130/133 (97.74%), Postives = 132/133 (99.25%), Query Frame = 0


Query: 41  GLERCGKSCRLRWTNYLRPDIKRGKFSLQEEQAIEQLHALLGNRWSAIATHLPKRTDNEI 100
           GLERCGKSCRLRWTNYLRPDIKRGKFSLQEEQAIEQLHALLGNRWSAIATHLPKRTDNEI
Sbjct: 45  GLERCGKSCRLRWTNYLRPDIKRGKFSLQEEQAIEQLHALLGNRWSAIATHLPKRTDNEI 104

Query: 101 KNYWNTHLKKKLIKMGIDPITHKPTKNNNEEMKVKNNINNSTLSHMAQWETARLEAEERL 160
           KNYWNTHLKKKLIKMGIDPITHKP KNNNEEMKVK+N+NNSTLSHMAQWETARLEAEERL
Sbjct: 105 KNYWNTHLKKKLIKMGIDPITHKPMKNNNEEMKVKSNMNNSTLSHMAQWETARLEAEERL 164

Query: 161 ARQHKIQPIPSSS 173
           ARQHKIQPIPSSS
Sbjct: 165 ARQHKIQPIPSSS 177

[Close]

BLAST of Cucsat.G13242.T6 vs. ExPASy TrEMBL
Match: A0A1S3B8L4 (transcription factor MYB76-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486978 PE=4 SV=1)

HSP 1 Score: 269 bits (687), Expect = 7.90e-88
Identity = 130/133 (97.74%), Postives = 132/133 (99.25%), Query Frame = 0


Query: 41  GLERCGKSCRLRWTNYLRPDIKRGKFSLQEEQAIEQLHALLGNRWSAIATHLPKRTDNEI 100
           GLERCGKSCRLRWTNYLRPDIKRGKFSLQEEQAIEQLHALLGNRWSAIATHLPKRTDNEI
Sbjct: 45  GLERCGKSCRLRWTNYLRPDIKRGKFSLQEEQAIEQLHALLGNRWSAIATHLPKRTDNEI 104

Query: 101 KNYWNTHLKKKLIKMGIDPITHKPTKNNNEEMKVKNNINNSTLSHMAQWETARLEAEERL 160
           KNYWNTHLKKKLIKMGIDPITHKP KNNNEEMKVK+N+NNSTLSHMAQWETARLEAEERL
Sbjct: 105 KNYWNTHLKKKLIKMGIDPITHKPMKNNNEEMKVKSNMNNSTLSHMAQWETARLEAEERL 164

Query: 161 ARQHKIQPIPSSS 173
           ARQHKIQPIPSSS
Sbjct: 165 ARQHKIQPIPSSS 177

[Close]

BLAST of Cucsat.G13242.T6 vs. ExPASy TrEMBL
Match: A0A6J1F3K6 (transcription factor MYB106-like OS=Cucurbita moschata OX=3662 GN=LOC111441815 PE=4 SV=1)

HSP 1 Score: 234 bits (598), Expect = 3.97e-74
Identity = 116/133 (87.22%), Postives = 123/133 (92.48%), Query Frame = 0


Query: 41  GLERCGKSCRLRWTNYLRPDIKRGKFSLQEEQAIEQLHALLGNRWSAIATHLPKRTDNEI 100
           GLERCGKSCRLRWTNYLRPDIKRGKFSL EEQAI QLHALLGNRWSAIATHLPKRTDNEI
Sbjct: 78  GLERCGKSCRLRWTNYLRPDIKRGKFSLHEEQAIVQLHALLGNRWSAIATHLPKRTDNEI 137

Query: 101 KNYWNTHLKKKLIKMGIDPITHKPTKNNNEEMKVKNNINNSTLSHMAQWETARLEAEERL 160
           KNYWNTH+KKKLIKMGIDPITHKP KNN E+    NN+N STL+HMAQWETARLEAEERL
Sbjct: 138 KNYWNTHMKKKLIKMGIDPITHKPIKNNEEQ----NNMN-STLTHMAQWETARLEAEERL 197

Query: 161 ARQHKIQPIPSSS 173
           ARQ K+QPIPS++
Sbjct: 198 ARQSKLQPIPSAN 205

The following BLAST results are available for this feature:

BLAST of Cucsat.G13242.T6 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LE63	7.7e-52	75.76	Transcription factor MYB106 OS=Arabidopsis thaliana OX=3702 GN=MYB106 PE=2 SV=1	[more]
Q9LXF1	3.8e-51	75.00	Transcription factor MYB16 OS=Arabidopsis thaliana OX=3702 GN=MYB16 PE=2 SV=1	[more]
Q9M2D9	1.8e-40	53.61	Transcription factor MYB17 OS=Arabidopsis thaliana OX=3702 GN=MYB17 PE=1 SV=1	[more]
Q9M0Y5	5.4e-37	74.71	Transcription factor MYB74 OS=Arabidopsis thaliana OX=3702 GN=MYB74 PE=2 SV=1	[more]
Q9S9Z2	1.2e-36	81.93	Transcription factor MYB93 OS=Arabidopsis thaliana OX=3702 GN=MYB93 PE=1 SV=1	[more]

BLAST of Cucsat.G13242.T6 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136689.1	2.52e-91	93.20	transcription factor MYB106 [Cucumis sativus] >KGN59540.1 hypothetical protein C...	[more]
XP_008443378.1	1.58e-87	97.74	PREDICTED: transcription factor MYB76-like isoform X2 [Cucumis melo] >KAA0053786...	[more]
XP_008443377.1	1.63e-87	97.74	PREDICTED: transcription factor MYB76-like isoform X1 [Cucumis melo]	[more]
XP_038905812.1	3.76e-75	88.55	transcription factor MYB106-like [Benincasa hispida]	[more]
XP_023521692.1	2.81e-74	87.22	transcription factor MYB106-like [Cucurbita pepo subsp. pepo] >XP_023528732.1 tr...	[more]

BLAST of Cucsat.G13242.T6 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LC22	1.22e-91	93.20	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G824850 PE=4 SV=1	[more]
A0A5A7UHQ9	7.64e-88	97.74	Transcription factor MYB76-like isoform X2 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3B8N3	7.64e-88	97.74	transcription factor MYB76-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC1034869...	[more]
A0A1S3B8L4	7.90e-88	97.74	transcription factor MYB76-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034869...	[more]
A0A6J1F3K6	3.97e-74	87.22	transcription factor MYB106-like OS=Cucurbita moschata OX=3662 GN=LOC111441815 P...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 62..110 e-value: 1.3E-16 score: 71.2
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 58..108 score: 10.208708
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 65..108 e-value: 1.99591E-11 score: 55.2742
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 63..108 e-value: 7.5E-15 score: 54.9
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 58..112 score: 25.9729
None	No IPR available	GENE3D	1.10.10.60		coord: 26..62 e-value: 5.8E-7 score: 31.4
None	No IPR available	GENE3D	1.10.10.60		coord: 64..143 e-value: 3.8E-20 score: 73.7
None	No IPR available	PANTHER	PTHR10641:SF586	TRANSCRIPTION FACTOR MYB106	coord: 39..179
None	No IPR available	PANTHER	PTHR10641	MYB FAMILY TRANSCRIPTION FACTOR	coord: 39..179
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 43..117

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G13242	Cucsat.G13242	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G13242.T6.E1	Cucsat.G13242.T6.E1	exon
Cucsat.G13242.T6.E2	Cucsat.G13242.T6.E2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G13242.T6.C1	Cucsat.G13242.T6.C1	CDS
Cucsat.G13242.T6.C2	Cucsat.G13242.T6.C2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G13242.T6	Cucsat.G13242.T6-protein	polypeptide