Cucsat.G13242.T4 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G13242.T4
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	MYB domain class transcription factor
Location	ctg1838: 2940053 .. 2941733 (+)
RNA-Seq Expression	Cucsat.G13242.T4
Synteny	Cucsat.G13242.T4

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCAAATTATTAGGGCATTTACTCCATTTCCGAAGCCTACATCCCTTTCCTCACATAAATATATAACAAAGAAGATAAAGAAAAAAGCAAAGAATAATCTGTACGACGACAAAAATTGTGATAAATCCAAATGGGAAGGTCTCCTTACTGCGACAGCTCGGGGTTGAAGAAAGGCCCATGGACGCCTGAAGAAGATCACAAGCTCTTAGCTTACATTCACCAGCATGGCCATGGAAGCTGGCGCGCCTTGCCCTCCAAAGCCGGTACGTATACGTTTTGAATTTTCGACAACTAGGAGATCAGAAATGATTACTTTTTTTTTTCTTTCTTTTGAAAAACATATAGGTCTTGAGAGATGTGGAAAGAGTTGTAGACTTCGATGGACGAATTATCTCCGACCTGACATTAAAAGAGGAAAGTTCAGTTTGCAGGAAGAGCAAGCAATAGAACAGTTGCATGCCCTCCTTGGAAACAGGTCGATTTGTACATGAAATTGAAAATTTAACTTTAAGATCATTAGTCTTTTTTTTTTGTTTAAGAATTTTGATTTTGATGACACGGTGTTTTAGGTGGTCTGCCATAGCAACACATTTGCCAAAGAGAACAGATAACGAGATAAAAAACTATTGGAATACTCATCTGAAGAAAAAGCTGATAAAAATGGGGATAGATCCAATCACTCACAAACCAACGAAGAACAATAATGAAGAAATGAAGGTGAAAAATAATATCAATAATTCCACCCTTAGCCACATGGCTCAGTGGGAAACAGCTCGACTCGAAGCCGAAGAAAGACTCGCTCGTCAACATAAGATTCAACCAATTCCTTCTTCTTCAGGTTGTGTCAAAATCAAAAACACAAAAAATAAAATTATTGGTTTATCAAATTTCAAAATTAAAAAAACTATAAAAGTCTTAAAACCATTGACTAACCATTTCAATCTCTTTATTATTTTTTTTAATTCTGCTTTTAAATTTTTGTTTATTATAAACAAAAATCATATATGTTTGATAGTTGATTTTGTTTCTTGTTTTTAAAAACAAAATGTATTTTTCAAAGTCTTTTCAATTTACTTTCATAATTTTAAAAACAAGTTTTTAGAAAGAAAAAAGAAAAAAAAGTGAATCAAAATTACAAACACACTTCTTTAGAAATTAGTTTTTTAAAAAAAACAGAATACCAAATCGGTATAACTCTCTATATTATTATTTTTATTTTTTGCTATGAAGGCGGTGTGGAGTCCCCAACCACGTCGTCAACTGCCACCGGAAACTGCCAACATTTGGCCGGAGAGAGGGGTGTTGCCGATGATCTGCCGTCGTCGGGAAGTGGCAGCGCTGGCGAGAGCAAGAATTATGGGTGGCCGGACACAATTCTTGGTGAATTCCTGAGATTCTGATTGGGAAGTGAGTTTTTATTTTTAAGAAGGAAGAAGAAAATTACTCAAAAAATAATTATGATATAATTTTTTTAAATTTTCTTTTTTTTGGGAGATTATGAGATCTAATCTTTATAGTTAAGTTATGACAGAAAACTATTATTTTACCAATTAATGTGTGAAAGTTTGATCATACACAATTAATTATGTTTGGTTATATAATAAGTTCAATTTAATTTCTCTCTTCCAAATTGTTTAGTGTGTGTTGAATTATTTAGTGAGCTTGTATTCATTTGTTAGTT

Coding sequence (CDS)

ATGCCCTCCTTGGAAACAGGTCGATTTGTACATGAAATTGAAAATTTAACTTTAAGATCATTAGTCTTTTTTTTTTGTTTAAGAATTTTGATTTTGATGACACGGTGTTTTAGGTGGTCTGCCATAGCAACACATTTGCCAAAGAGAACAGATAACGAGATAAAAAACTATTGGAATACTCATCTGAAGAAAAAGCTGATAAAAATGGGGATAGATCCAATCACTCACAAACCAACGAAGAACAATAATGAAGAAATGAAGGTGAAAAATAATATCAATAATTCCACCCTTAGCCACATGGCTCAGTGGGAAACAGCTCGACTCGAAGCCGAAGAAAGACTCGCTCGTCAACATAAGATTCAACCAATTCCTTCTTCTTCAGGCGGTGTGGAGTCCCCAACCACGTCGTCAACTGCCACCGGAAACTGCCAACATTTGGCCGGAGAGAGGGGTGTTGCCGATGATCTGCCGTCGTCGGGAAGTGGCAGCGCTGGCGAGAGCAAGAATTATGGGTGGCCGGACACAATTCTTGGTGAATTCCTGAGATTCTGA

Protein sequence

MPSLETGRFVHEIENLTLRSLVFFFCLRILILMTRCFRWSAIATHLPKRTDNEIKNYWNTHLKKKLIKMGIDPITHKPTKNNNEEMKVKNNINNSTLSHMAQWETARLEAEERLARQHKIQPIPSSSGGVESPTTSSTATGNCQHLAGERGVADDLPSSGSGSAGESKNYGWPDTILGEFLRF

Homology

[Close]

BLAST of Cucsat.G13242.T4 vs. ExPASy Swiss-Prot
Match: Q9LE63 (Transcription factor MYB106 OS=Arabidopsis thaliana OX=3702 GN=MYB106 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 5.0e-27
Identity = 61/83 (73.49%), Postives = 68/83 (81.93%), Query Frame = 0


Query: 38  RWSAIATHLPKRTDNEIKNYWNTHLKKKLIKMGIDPITHKPTKNNNEEMKVKNNINNSTL 97
           RWSAIATHLPKRTDNEIKNYWNTHLKK+LIKMGIDP+THK  KN         + N +TL
Sbjct: 88  RWSAIATHLPKRTDNEIKNYWNTHLKKRLIKMGIDPVTHK-HKNETLSSSTGQSKNAATL 147

Query: 98  SHMAQWETARLEAEERLARQHKI 121
           SHMAQWE+ARLEAE RLAR+ K+
Sbjct: 148 SHMAQWESARLEAEARLARESKL 169

[Close]

BLAST of Cucsat.G13242.T4 vs. ExPASy Swiss-Prot
Match: Q9LXF1 (Transcription factor MYB16 OS=Arabidopsis thaliana OX=3702 GN=MYB16 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.5e-26
Identity = 59/83 (71.08%), Postives = 68/83 (81.93%), Query Frame = 0


Query: 38  RWSAIATHLPKRTDNEIKNYWNTHLKKKLIKMGIDPITHKPTKNNNEEMKVKNNINNSTL 97
           RWSAIATHLPKRTDNEIKNYWNTHLKK+L+KMGIDP+THKP KN      +  + N + L
Sbjct: 88  RWSAIATHLPKRTDNEIKNYWNTHLKKRLVKMGIDPVTHKP-KNETPLSSLGLSKNAAIL 147

Query: 98  SHMAQWETARLEAEERLARQHKI 121
           SH AQWE+ARLEAE RLAR+ K+
Sbjct: 148 SHTAQWESARLEAEARLARESKL 169

[Close]

BLAST of Cucsat.G13242.T4 vs. ExPASy Swiss-Prot
Match: P80074 (Myb-related protein Pp1 (Fragment) OS=Physcomitrium patens OX=3218 GN=PP1 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 4.3e-18
Identity = 47/87 (54.02%), Postives = 63/87 (72.41%), Query Frame = 0


Query: 38  RWSAIATHLPKRTDNEIKNYWNTHLKKKLIKMGIDPITHKPTKNNN----EEMKVKNNIN 97
           RWSAIA  +P+RTDNEIKNYWNTHLKK+L++MGIDP+THK T          +     + 
Sbjct: 4   RWSAIA--IPRRTDNEIKNYWNTHLKKRLMQMGIDPVTHKSTAAEELVHYSIIPGLRPVV 63

Query: 98  NSTLSHMAQWETARLEAEERLARQHKI 121
           ++ L+HM+QW++AR EAE RL+RQ  +
Sbjct: 64  STNLTHMSQWDSARAEAEARLSRQSSL 88

[Close]

BLAST of Cucsat.G13242.T4 vs. ExPASy Swiss-Prot
Match: Q9M2D9 (Transcription factor MYB17 OS=Arabidopsis thaliana OX=3702 GN=MYB17 PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 5.6e-18
Identity = 50/93 (53.76%), Postives = 63/93 (67.74%), Query Frame = 0


Query: 38  RWSAIATHLPKRTDNEIKNYWNTHLKKKLIKMGIDPITHKPTKNNNEEMKVKNNINNSTL 97
           RW+AIA  LP RTDNEIKN WNTHLKK+L+ MG+DP TH+P  +       K   ++ T 
Sbjct: 88  RWAAIAAQLPGRTDNEIKNLWNTHLKKRLLSMGLDPRTHEPLPSYG---LAKQAPSSPTT 147

Query: 98  SHMAQWETARLEAEERLARQHKIQPIPSSSGGV 131
            HMAQWE+AR+EAE RL+R+  +   PS   GV
Sbjct: 148 RHMAQWESARVEAEARLSRESMLFS-PSFYSGV 176

[Close]

BLAST of Cucsat.G13242.T4 vs. ExPASy Swiss-Prot
Match: Q9SPG5 (Transcription factor MYB76 OS=Arabidopsis thaliana OX=3702 GN=MYB76 PE=1 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.0e-15
Identity = 46/105 (43.81%), Postives = 62/105 (59.05%), Query Frame = 0


Query: 2   PSLETGRFVHEIENLTLRSLVFFFCLRILILMTRCFRWSAIATHLPKRTDNEIKNYWNTH 61
           P ++ G F +E E +            I++  +R  +WS IA HLPKRTDNE+KNYWNTH
Sbjct: 63  PDIKRGEFSYEEEQII-----------IMLHASRGNKWSVIARHLPKRTDNEVKNYWNTH 122

Query: 62  LKKKLIKMGIDPITHKPTKNNN----EEMKVKNNINNSTLSHMAQ 103
           LKK+LI  GIDP+THKP  ++N    E MK      ++   H +Q
Sbjct: 123 LKKRLIDDGIDPVTHKPLASSNPNPVEPMKFDFQKKSNQDEHSSQ 156

[Close]

BLAST of Cucsat.G13242.T4 vs. NCBI nr
Match: XP_004136689.1 (transcription factor MYB106 [Cucumis sativus] >KGN59540.1 hypothetical protein Csa_002164 [Cucumis sativus])

HSP 1 Score: 301 bits (772), Expect = 2.12e-101
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 38  RWSAIATHLPKRTDNEIKNYWNTHLKKKLIKMGIDPITHKPTKNNNEEMKVKNNINNSTL 97
           RWSAIATHLPKRTDNEIKNYWNTHLKKKLIKMGIDPITHKPTKNNNEEMKVKNNINNSTL
Sbjct: 88  RWSAIATHLPKRTDNEIKNYWNTHLKKKLIKMGIDPITHKPTKNNNEEMKVKNNINNSTL 147

Query: 98  SHMAQWETARLEAEERLARQHKIQPIPSSSGGVESPTTSSTATGNCQHLAGERGVADDLP 157
           SHMAQWETARLEAEERLARQHKIQPIPSSSGGVESPTTSSTATGNCQHLAGERGVADDLP
Sbjct: 148 SHMAQWETARLEAEERLARQHKIQPIPSSSGGVESPTTSSTATGNCQHLAGERGVADDLP 207

Query: 158 SSGSGSAGESKNYGWPDTILGEFLRF 183
           SSGSGSAGESKNYGWPDTILGEFLRF
Sbjct: 208 SSGSGSAGESKNYGWPDTILGEFLRF 233

[Close]

BLAST of Cucsat.G13242.T4 vs. NCBI nr
Match: XP_008443378.1 (PREDICTED: transcription factor MYB76-like isoform X2 [Cucumis melo] >KAA0053786.1 transcription factor MYB76-like isoform X2 [Cucumis melo var. makuwa] >TYK25615.1 transcription factor MYB76-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 275 bits (702), Expect = 9.53e-91
Identity = 138/147 (93.88%), Postives = 140/147 (95.24%), Query Frame = 0


Query: 38  RWSAIATHLPKRTDNEIKNYWNTHLKKKLIKMGIDPITHKPTKNNNEEMKVKNNINNSTL 97
           RWSAIATHLPKRTDNEIKNYWNTHLKKKLIKMGIDPITHKP KNNNEEMKVK+N+NNSTL
Sbjct: 88  RWSAIATHLPKRTDNEIKNYWNTHLKKKLIKMGIDPITHKPMKNNNEEMKVKSNMNNSTL 147

Query: 98  SHMAQWETARLEAEERLARQHKIQPIPSSSGG-VESPTTSSTATGNCQHLAGERGVADDL 157
           SHMAQWETARLEAEERLARQHKIQPIPSSS G VESPTTSSTAT NCQHLAGE GVADDL
Sbjct: 148 SHMAQWETARLEAEERLARQHKIQPIPSSSSGRVESPTTSSTATENCQHLAGESGVADDL 207

Query: 158 PSSGSGSAGESKNYGWPDTILGEFLRF 183
           PSSGSGSA ESKNYGWPDTIL EFLRF
Sbjct: 208 PSSGSGSA-ESKNYGWPDTILDEFLRF 233

[Close]

BLAST of Cucsat.G13242.T4 vs. NCBI nr
Match: XP_008443377.1 (PREDICTED: transcription factor MYB76-like isoform X1 [Cucumis melo])

HSP 1 Score: 273 bits (699), Expect = 2.82e-90
Identity = 138/148 (93.24%), Postives = 140/148 (94.59%), Query Frame = 0


Query: 38  RWSAIATHLPKRTDNEIKNYWNTHLKKKLIKMGIDPITHKPTKNNNEEMKVKNNINNSTL 97
           RWSAIATHLPKRTDNEIKNYWNTHLKKKLIKMGIDPITHKP KNNNEEMKVK+N+NNSTL
Sbjct: 88  RWSAIATHLPKRTDNEIKNYWNTHLKKKLIKMGIDPITHKPMKNNNEEMKVKSNMNNSTL 147

Query: 98  SHMAQWETARLEAEERLARQHKIQPIPSSS--GGVESPTTSSTATGNCQHLAGERGVADD 157
           SHMAQWETARLEAEERLARQHKIQPIPSSS  G VESPTTSSTAT NCQHLAGE GVADD
Sbjct: 148 SHMAQWETARLEAEERLARQHKIQPIPSSSSEGRVESPTTSSTATENCQHLAGESGVADD 207

Query: 158 LPSSGSGSAGESKNYGWPDTILGEFLRF 183
           LPSSGSGSA ESKNYGWPDTIL EFLRF
Sbjct: 208 LPSSGSGSA-ESKNYGWPDTILDEFLRF 234

[Close]

BLAST of Cucsat.G13242.T4 vs. NCBI nr
Match: XP_038905812.1 (transcription factor MYB106-like [Benincasa hispida])

HSP 1 Score: 236 bits (603), Expect = 1.30e-75
Identity = 124/154 (80.52%), Postives = 130/154 (84.42%), Query Frame = 0


Query: 38  RWSAIATHLPKRTDNEIKNYWNTHLKKKLIKMGIDPITHKPTKNNNEEMKVKNNINNSTL 97
           RWSAIATHLPKRTDNEIKNYWNTHLKKKLIKMGIDPITHKP KNNNEE+K KN +N STL
Sbjct: 88  RWSAIATHLPKRTDNEIKNYWNTHLKKKLIKMGIDPITHKPMKNNNEEIKSKNTVN-STL 147

Query: 98  SHMAQWETARLEAEERLARQHKIQPIPS-------SSGGVESPTTSSTATGNCQHLAGER 157
           SHMAQWE ARLEAEERLARQ ++QPI S       SSGG ESPTTSSTATG C HLAG+ 
Sbjct: 148 SHMAQWEIARLEAEERLARQSRLQPISSFNQNSFGSSGGEESPTTSSTATGKCHHLAGQM 207

Query: 158 GVADDLPS-SGSGSAGESKNYGWPDTILGEFLRF 183
           G ADDLP+ SGSG A ESKNY WPD ILGEFLRF
Sbjct: 208 GNADDLPAPSGSGGA-ESKNYCWPDAILGEFLRF 239

[Close]

BLAST of Cucsat.G13242.T4 vs. NCBI nr
Match: XP_023521692.1 (transcription factor MYB106-like [Cucurbita pepo subsp. pepo] >XP_023528732.1 transcription factor MYB106-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 179 bits (454), Expect = 2.40e-53
Identity = 103/148 (69.59%), Postives = 109/148 (73.65%), Query Frame = 0


Query: 38  RWSAIATHLPKRTDNEIKNYWNTHLKKKLIKMGIDPITHKPTKNNNEEMKVKNNINNSTL 97
           RWSAIATHLPKRTDNEIKNYWNTH+KKKLIKMGIDPITHKP KNN E+    NN+N STL
Sbjct: 88  RWSAIATHLPKRTDNEIKNYWNTHMKKKLIKMGIDPITHKPIKNNEEQ----NNMN-STL 147

Query: 98  SHMAQWETARLEAEERLARQHKIQPIPS-------SSGGVESPTTSSTATGNCQHLAGER 157
           +HMAQWETARLEAEERLARQ K+QPIPS       SSGG ESPTTSSTA G         
Sbjct: 148 THMAQWETARLEAEERLARQSKLQPIPSANQNPYGSSGGEESPTTSSTAAGG-------- 207

Query: 158 GVADDLPSSGSGSAGESKNYGWPDTILG 178
              D LPSS      +SKN  W DTILG
Sbjct: 208 ---DQLPSS------DSKNNWW-DTILG 212

[Close]

BLAST of Cucsat.G13242.T4 vs. ExPASy TrEMBL
Match: A0A0A0LC22 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G824850 PE=4 SV=1)

HSP 1 Score: 301 bits (772), Expect = 1.03e-101
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 38  RWSAIATHLPKRTDNEIKNYWNTHLKKKLIKMGIDPITHKPTKNNNEEMKVKNNINNSTL 97
           RWSAIATHLPKRTDNEIKNYWNTHLKKKLIKMGIDPITHKPTKNNNEEMKVKNNINNSTL
Sbjct: 88  RWSAIATHLPKRTDNEIKNYWNTHLKKKLIKMGIDPITHKPTKNNNEEMKVKNNINNSTL 147

Query: 98  SHMAQWETARLEAEERLARQHKIQPIPSSSGGVESPTTSSTATGNCQHLAGERGVADDLP 157
           SHMAQWETARLEAEERLARQHKIQPIPSSSGGVESPTTSSTATGNCQHLAGERGVADDLP
Sbjct: 148 SHMAQWETARLEAEERLARQHKIQPIPSSSGGVESPTTSSTATGNCQHLAGERGVADDLP 207

Query: 158 SSGSGSAGESKNYGWPDTILGEFLRF 183
           SSGSGSAGESKNYGWPDTILGEFLRF
Sbjct: 208 SSGSGSAGESKNYGWPDTILGEFLRF 233

[Close]

BLAST of Cucsat.G13242.T4 vs. ExPASy TrEMBL
Match: A0A5A7UHQ9 (Transcription factor MYB76-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007750 PE=4 SV=1)

HSP 1 Score: 275 bits (702), Expect = 4.61e-91
Identity = 138/147 (93.88%), Postives = 140/147 (95.24%), Query Frame = 0


Query: 38  RWSAIATHLPKRTDNEIKNYWNTHLKKKLIKMGIDPITHKPTKNNNEEMKVKNNINNSTL 97
           RWSAIATHLPKRTDNEIKNYWNTHLKKKLIKMGIDPITHKP KNNNEEMKVK+N+NNSTL
Sbjct: 88  RWSAIATHLPKRTDNEIKNYWNTHLKKKLIKMGIDPITHKPMKNNNEEMKVKSNMNNSTL 147

Query: 98  SHMAQWETARLEAEERLARQHKIQPIPSSSGG-VESPTTSSTATGNCQHLAGERGVADDL 157
           SHMAQWETARLEAEERLARQHKIQPIPSSS G VESPTTSSTAT NCQHLAGE GVADDL
Sbjct: 148 SHMAQWETARLEAEERLARQHKIQPIPSSSSGRVESPTTSSTATENCQHLAGESGVADDL 207

Query: 158 PSSGSGSAGESKNYGWPDTILGEFLRF 183
           PSSGSGSA ESKNYGWPDTIL EFLRF
Sbjct: 208 PSSGSGSA-ESKNYGWPDTILDEFLRF 233

[Close]

BLAST of Cucsat.G13242.T4 vs. ExPASy TrEMBL
Match: A0A1S3B8N3 (transcription factor MYB76-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486978 PE=4 SV=1)

HSP 1 Score: 275 bits (702), Expect = 4.61e-91
Identity = 138/147 (93.88%), Postives = 140/147 (95.24%), Query Frame = 0


Query: 38  RWSAIATHLPKRTDNEIKNYWNTHLKKKLIKMGIDPITHKPTKNNNEEMKVKNNINNSTL 97
           RWSAIATHLPKRTDNEIKNYWNTHLKKKLIKMGIDPITHKP KNNNEEMKVK+N+NNSTL
Sbjct: 88  RWSAIATHLPKRTDNEIKNYWNTHLKKKLIKMGIDPITHKPMKNNNEEMKVKSNMNNSTL 147

Query: 98  SHMAQWETARLEAEERLARQHKIQPIPSSSGG-VESPTTSSTATGNCQHLAGERGVADDL 157
           SHMAQWETARLEAEERLARQHKIQPIPSSS G VESPTTSSTAT NCQHLAGE GVADDL
Sbjct: 148 SHMAQWETARLEAEERLARQHKIQPIPSSSSGRVESPTTSSTATENCQHLAGESGVADDL 207

Query: 158 PSSGSGSAGESKNYGWPDTILGEFLRF 183
           PSSGSGSA ESKNYGWPDTIL EFLRF
Sbjct: 208 PSSGSGSA-ESKNYGWPDTILDEFLRF 233

[Close]

BLAST of Cucsat.G13242.T4 vs. ExPASy TrEMBL
Match: A0A1S3B8L4 (transcription factor MYB76-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486978 PE=4 SV=1)

HSP 1 Score: 273 bits (699), Expect = 1.36e-90
Identity = 138/148 (93.24%), Postives = 140/148 (94.59%), Query Frame = 0


Query: 38  RWSAIATHLPKRTDNEIKNYWNTHLKKKLIKMGIDPITHKPTKNNNEEMKVKNNINNSTL 97
           RWSAIATHLPKRTDNEIKNYWNTHLKKKLIKMGIDPITHKP KNNNEEMKVK+N+NNSTL
Sbjct: 88  RWSAIATHLPKRTDNEIKNYWNTHLKKKLIKMGIDPITHKPMKNNNEEMKVKSNMNNSTL 147

Query: 98  SHMAQWETARLEAEERLARQHKIQPIPSSS--GGVESPTTSSTATGNCQHLAGERGVADD 157
           SHMAQWETARLEAEERLARQHKIQPIPSSS  G VESPTTSSTAT NCQHLAGE GVADD
Sbjct: 148 SHMAQWETARLEAEERLARQHKIQPIPSSSSEGRVESPTTSSTATENCQHLAGESGVADD 207

Query: 158 LPSSGSGSAGESKNYGWPDTILGEFLRF 183
           LPSSGSGSA ESKNYGWPDTIL EFLRF
Sbjct: 208 LPSSGSGSA-ESKNYGWPDTILDEFLRF 234

[Close]

BLAST of Cucsat.G13242.T4 vs. ExPASy TrEMBL
Match: A0A6J1F3K6 (transcription factor MYB106-like OS=Cucurbita moschata OX=3662 GN=LOC111441815 PE=4 SV=1)

HSP 1 Score: 179 bits (454), Expect = 3.13e-53
Identity = 103/148 (69.59%), Postives = 109/148 (73.65%), Query Frame = 0


Query: 38  RWSAIATHLPKRTDNEIKNYWNTHLKKKLIKMGIDPITHKPTKNNNEEMKVKNNINNSTL 97
           RWSAIATHLPKRTDNEIKNYWNTH+KKKLIKMGIDPITHKP KNN E+    NN+N STL
Sbjct: 121 RWSAIATHLPKRTDNEIKNYWNTHMKKKLIKMGIDPITHKPIKNNEEQ----NNMN-STL 180

Query: 98  SHMAQWETARLEAEERLARQHKIQPIPS-------SSGGVESPTTSSTATGNCQHLAGER 157
           +HMAQWETARLEAEERLARQ K+QPIPS       SSGG ESPTTSSTA G         
Sbjct: 181 THMAQWETARLEAEERLARQSKLQPIPSANQNPYGSSGGEESPTTSSTAAGG-------- 240

Query: 158 GVADDLPSSGSGSAGESKNYGWPDTILG 178
              D LPSS      +SKN  W DTILG
Sbjct: 241 ---DQLPSS------DSKNNWW-DTILG 245

The following BLAST results are available for this feature:

BLAST of Cucsat.G13242.T4 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LE63	5.0e-27	73.49	Transcription factor MYB106 OS=Arabidopsis thaliana OX=3702 GN=MYB106 PE=2 SV=1	[more]
Q9LXF1	2.5e-26	71.08	Transcription factor MYB16 OS=Arabidopsis thaliana OX=3702 GN=MYB16 PE=2 SV=1	[more]
P80074	4.3e-18	54.02	Myb-related protein Pp1 (Fragment) OS=Physcomitrium patens OX=3218 GN=PP1 PE=2 S...	[more]
Q9M2D9	5.6e-18	53.76	Transcription factor MYB17 OS=Arabidopsis thaliana OX=3702 GN=MYB17 PE=1 SV=1	[more]
Q9SPG5	2.0e-15	43.81	Transcription factor MYB76 OS=Arabidopsis thaliana OX=3702 GN=MYB76 PE=1 SV=1	[more]

BLAST of Cucsat.G13242.T4 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136689.1	2.12e-101	100.00	transcription factor MYB106 [Cucumis sativus] >KGN59540.1 hypothetical protein C...	[more]
XP_008443378.1	9.53e-91	93.88	PREDICTED: transcription factor MYB76-like isoform X2 [Cucumis melo] >KAA0053786...	[more]
XP_008443377.1	2.82e-90	93.24	PREDICTED: transcription factor MYB76-like isoform X1 [Cucumis melo]	[more]
XP_038905812.1	1.30e-75	80.52	transcription factor MYB106-like [Benincasa hispida]	[more]
XP_023521692.1	2.40e-53	69.59	transcription factor MYB106-like [Cucurbita pepo subsp. pepo] >XP_023528732.1 tr...	[more]

BLAST of Cucsat.G13242.T4 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LC22	1.03e-101	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G824850 PE=4 SV=1	[more]
A0A5A7UHQ9	4.61e-91	93.88	Transcription factor MYB76-like isoform X2 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3B8N3	4.61e-91	93.88	transcription factor MYB76-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC1034869...	[more]
A0A1S3B8L4	1.36e-90	93.24	transcription factor MYB76-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034869...	[more]
A0A6J1F3K6	3.13e-53	69.59	transcription factor MYB106-like OS=Cucurbita moschata OX=3662 GN=LOC111441815 P...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 12..64 e-value: 3.0E-4 score: 30.1
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 38..62 score: 6.678537
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 38..62 e-value: 4.20969E-7 score: 42.9478
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 38..62 e-value: 1.9E-6 score: 28.0
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 38..66 score: 14.335172
None	No IPR available	GENE3D	1.10.10.60		coord: 13..106 e-value: 1.4E-14 score: 55.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..144
None	No IPR available	PANTHER	PTHR10641	MYB FAMILY TRANSCRIPTION FACTOR	coord: 38..135
None	No IPR available	PANTHER	PTHR10641:SF586	TRANSCRIPTION FACTOR MYB106	coord: 38..135
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 32..71

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G13242	Cucsat.G13242	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G13242.T4.E1	Cucsat.G13242.T4.E1	exon
Cucsat.G13242.T4.E2	Cucsat.G13242.T4.E2	exon
Cucsat.G13242.T4.E3	Cucsat.G13242.T4.E3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G13242.T4.C1	Cucsat.G13242.T4.C1	CDS
Cucsat.G13242.T4.C2	Cucsat.G13242.T4.C2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G13242.T4	Cucsat.G13242.T4-protein	polypeptide