
Cucsat.G13235.T3 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AGAGATAAGCACTCCCGGACTCCGTATCCTTATGTTTCATCCTATTAATTGTTTTTTGCAGATAATTTTTTTTAAAATAATTTTGTTCGGATCATCATCCCTTCGTTCTGCTTTACTTAAATACAGGGGTTGCTTTCAGTTATAGGTTTGCTTGACTCAGTTTGAGTTTAATTAAATTGAAGTTGCTTAGGTTAGATTGGTTTAAGTAGCTTCTTAGTGGTTGTTTCTAGGTTAAATCAACCGTACAAATCCAAGTAAATTAATTTCTAAAATTTATCTTTATATGAGGATATTTTATTATCCACCCAAGTACTCGTTTTTAGGTCTTGTATCCTTCAATAATTTTTGGAAATTAATACGGTTTGTTCTGTTTTTTGTTTTTTTGGATTATAAATTTTAGGGTAAGTTAATCGAAAAATCTAAATCAATCTAATGCAGTAATGCTGTATGGTGATTAGTGATTGAATTGAGTTTTGTCATAACCAGAGTCATTTGATGAGTGAGTTTGAGTATATTCACTGAATCCAAAAGACATCTATATATGTGTGTGTGTGTGTATAAGTAAAGTTCCACTATTATTATCCATGAAGGAGGAGAAACCAATATGTAAATGTAATCTCTCGATTAAAAAAATTTCCTTGAAATGTTTTTTTCAAGCCTGACACTGGCTTAATGAGAAGAGTCCAATAACTTTAGTTTGTCTCTTGATGAGTGATTTTCAAGCTTTCATTGTGAGAATTCGGGTGGATTCTTGCCTCACGGCTATTATGAAATCTATGCTTCGTGAATTAATAGGGAGAGTAGATAATATCTAAACTGTCAAGAGATGGGTAACAGGGCATACAGAACATTCTGAAAGAAATTTGGTAACTGACTGTCTTTGAATTTTGCTGTTGCTCTACAAAAACTGTATCTCTTCATTCATTATTCCCTCTACTGTTGATAGTCTAGCTCGTCACTTCATTATATCACAATAGGGAGGGGATGCACTGGTTCTCCTATTATTTGATAGTTTATCCTGAAAAAGCATGTTAGGACATTATTTCTAAAAATTAAAAAACTTGGAATTGTATTCCTGCTTGCAACTAATGAACAGAAATCTTGGAATTAATGCTGAATGACTCAAACACGAACACAGCTAGTCGGGACACCTTTTATTGACTAATTGCTAACACTAAATGAATGAAGGAAAATTTTCCTCAATTTACCTGCTGCTGCCATTGGATAGGAAGACGTTGTTTTGTAACTTAAAACTAGTTCTTTGGGAAAATTTCATTTCTTACCTTGTATAGCTTAGGGAGTTAATTTTAACATTTCAACTTTTAGTTTCATCAAATTAAACTCTATACTAAAAGAGGTCAACTATTGCCCTCAATGAGTTCTTAACATGTTTTATCTTACTAAAAGTGTTATTTGGGATGTTTGGGGGAAAAAATCCCAATTCTACCGCAGGAAAAATAGAAAATAATGGAGAAATTAAAAGAAAACAACAAACTAAGGAACACAAGAACTTATGTGGAGAACTTCAAACCAAAGAAAAACTAGAGTCTACTAGGAAAAAACTTCACTGTTTGAAAAATTGTTACAATTACATTAAATCTCTCCCCCATCCCAATTACAAGAACACTCACTCAAAACTCTTGTATCATTCACCCCTTTTTCTCCACTCTCAAACTATAGAGTACAAAAAGGGAATTGAACTAGAGTTAGCACACTCATGCTTAAGCTAGAAACCCAAGTTGTAGGCTGACTTTATTTTATAACGTTTGGAGTCCATCACATTCTTGAACCTTTGCAATGTGGTACAACATATTCTTCTAGTATTTTACTCAAAAATCTACATGTACTCTGTTTTTGTGGGTACAAGGTAAACCAATCCTGTTTAGATGCTTTTCAGCCAGGTTTGAATTTCATTGTAGATTCTGGGAGCTGTTTTACCTTCTTGATTTTGTGGCTTGGTTCTGGCAATTTCATGGTTGAGTTTGAGCATTTTTGTACTTTGAAATCGAATGATTTGGTAGTTCAATTTTATGGGTGTGTGGTATGGTTGATTCGTGTGCAATTTTCAATTATTGTTTTAAAAAAGTATTTCACTTACTCAAGTTGAAGGTTTGACCGGATGAAATTGAAAGTTCAATGTTAAAATTGTAAGGAGTAAAAATGATATATTCTCATTTTTTCCCAAGAAACCCTGCTTGTAGAGTTTCTGCTAGAGCAGAGTTCCCTGGCTTATTAATGCTGATTGTATTTAAATGGTGTATTCAAATTCTTGAAAGTCTTCTTTACCTTATGTTTAAATTTTATCACAATGCATGATGCTTGACAGGTTATTAAGTTTCTCTTATCTTTTCAATTTCATGATTTCTGCTGGCTTGACTGAGCAAGCACTTACTTCTAGCATCCCAGCCCTCCGACTGTGTTTCCTTCACTTTGAATTATAGACTGCATTTGGCAGCATGGTCTGGACAAGCAGAGGTTATAAATTATCTATGCAAGAACAAGGCCGATGTTGGAGCCGCTGCCATGGATGATATGGCTGCTATACATTTTGCATCTCAGAAAGGACATTTAGAAGTAGTTTGTACTTTGATCTCATGTGGCGGATCGTTAAAAGCTTCTACTAGAAAGGGTATGACCCCACTGCACTATGCTGTGCAAGGTTCGTATTTGGAGCTTGTTAAGTACTTAGCAAAGAAAGGTGCAAATTTGAGTGCTAGAACAAAGGCAGGTGAAACCCCTCTTGATTTGGCTAGTAATGAAGAAATCCGCTTGTTCTTGGAAGAATACGAAAAATCATCTAAGAAAGAAGAGCCAAAAGATAAAGGGAAAGCCGGGAAAACTCATTCACAGCCAACAGTATCAGGAGAAGATGAGGCACCCTCTCCGAAGGCAAATGAGACTGAAAAATGAAGAAGATCCAGGAGTTGAGCAGTCAAAGAAGCAAAGTGATGAAGAAGACCAAGGGGACGAGCAATCGAAGAGGAAGAGTGATGGGACTATTGGTGAGGAAGCCCCTGTCAAAACCGAAGAAGGCGAAAGTCGCCCTTGGCCATCTTCTAACATCGGATGACACACAGGAAGACGACGAAAACTCATAAAAATGGCATGGAGTGTTGTTGTGTGTAACCAACATCATTGTAATAACATTAACACACCTTAATCCTTACAGCCCCTTCTCCATATGTTTACTATCAACTCCAGGATTTTACCTGTGTCTAATCATCACATCAAAGGTTTCATAGATGTTATCTCTCACTAACATTATTTCTTTTC ATGGATGATATGGCTGCTATACATTTTGCATCTCAGAAAGGACATTTAGAAGTAGTTTGTACTTTGATCTCATGTGGCGGATCGTTAAAAGCTTCTACTAGAAAGGGTATGACCCCACTGCACTATGCTGTGCAAGGTTCGTATTTGGAGCTTGTTAAGTACTTAGCAAAGAAAGGTGCAAATTTGAGTGCTAGAACAAAGGCAGGTGAAACCCCTCTTGATTTGGCTAGTAATGAAGAAATCCGCTTGTTCTTGGAAGAATACGAAAAATCATCTAAGAAAGAAGAGCCAAAAGATAAAGGGAAAGCCGGGAAAACTCATTCACAGCCAACAGTATCAGGAGAAGATGAGGCACCCTCTCCGAAGGCAAATGAGACTGAAAAATGA MDDMAAIHFASQKGHLEVVCTLISCGGSLKASTRKGMTPLHYAVQGSYLELVKYLAKKGANLSARTKAGETPLDLASNEEIRLFLEEYEKSSKKEEPKDKGKAGKTHSQPTVSGEDEAPSPKANETEK Homology
BLAST of Cucsat.G13235.T3 vs. ExPASy Swiss-Prot
Match: Q01484 (Ankyrin-2 OS=Homo sapiens OX=9606 GN=ANK2 PE=1 SV=4) HSP 1 Score: 65.1 bits (157), Expect = 6.7e-10 Identity = 35/89 (39.33%), Postives = 53/89 (59.55%), Query Frame = 0
BLAST of Cucsat.G13235.T3 vs. ExPASy Swiss-Prot
Match: Q8C8R3 (Ankyrin-2 OS=Mus musculus OX=10090 GN=Ank2 PE=1 SV=2) HSP 1 Score: 65.1 bits (157), Expect = 6.7e-10 Identity = 35/89 (39.33%), Postives = 53/89 (59.55%), Query Frame = 0
BLAST of Cucsat.G13235.T3 vs. ExPASy Swiss-Prot
Match: Q12955 (Ankyrin-3 OS=Homo sapiens OX=9606 GN=ANK3 PE=1 SV=3) HSP 1 Score: 63.9 bits (154), Expect = 1.5e-09 Identity = 32/74 (43.24%), Postives = 49/74 (66.22%), Query Frame = 0
BLAST of Cucsat.G13235.T3 vs. ExPASy Swiss-Prot
Match: G5E8K5 (Ankyrin-3 OS=Mus musculus OX=10090 GN=Ank3 PE=1 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.5e-09 Identity = 32/74 (43.24%), Postives = 49/74 (66.22%), Query Frame = 0
BLAST of Cucsat.G13235.T3 vs. ExPASy Swiss-Prot
Match: O70511 (Ankyrin-3 OS=Rattus norvegicus OX=10116 GN=Ank3 PE=1 SV=3) HSP 1 Score: 63.9 bits (154), Expect = 1.5e-09 Identity = 32/74 (43.24%), Postives = 49/74 (66.22%), Query Frame = 0
BLAST of Cucsat.G13235.T3 vs. NCBI nr
Match: XP_004136678.1 (uncharacterized protein LOC101209264 [Cucumis sativus] >KGN59517.1 hypothetical protein Csa_001580 [Cucumis sativus]) HSP 1 Score: 241 bits (616), Expect = 4.01e-78 Identity = 126/127 (99.21%), Postives = 126/127 (99.21%), Query Frame = 0
BLAST of Cucsat.G13235.T3 vs. NCBI nr
Match: XP_008443349.1 (PREDICTED: tankyrase-2 [Cucumis melo] >KAA0053806.1 tankyrase-2 [Cucumis melo var. makuwa] >TYK25595.1 tankyrase-2 [Cucumis melo var. makuwa]) HSP 1 Score: 229 bits (585), Expect = 2.05e-73 Identity = 120/127 (94.49%), Postives = 123/127 (96.85%), Query Frame = 0
BLAST of Cucsat.G13235.T3 vs. NCBI nr
Match: XP_038904734.1 (putative ankyrin repeat protein RF_0381 [Benincasa hispida]) HSP 1 Score: 211 bits (536), Expect = 5.23e-66 Identity = 112/127 (88.19%), Postives = 118/127 (92.91%), Query Frame = 0
BLAST of Cucsat.G13235.T3 vs. NCBI nr
Match: XP_023527839.1 (tankyrase-2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 200 bits (509), Expect = 1.40e-61 Identity = 107/126 (84.92%), Postives = 115/126 (91.27%), Query Frame = 0
BLAST of Cucsat.G13235.T3 vs. NCBI nr
Match: KAG6580936.1 (hypothetical protein SDJN03_20938, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017681.1 hypothetical protein SDJN02_19547 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 196 bits (497), Expect = 4.25e-60 Identity = 105/126 (83.33%), Postives = 114/126 (90.48%), Query Frame = 0
BLAST of Cucsat.G13235.T3 vs. ExPASy TrEMBL
Match: A0A0A0LFZ4 (ANK_REP_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G823650 PE=4 SV=1) HSP 1 Score: 241 bits (616), Expect = 1.94e-78 Identity = 126/127 (99.21%), Postives = 126/127 (99.21%), Query Frame = 0
BLAST of Cucsat.G13235.T3 vs. ExPASy TrEMBL
Match: A0A5D3DQ33 (Tankyrase-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007540 PE=4 SV=1) HSP 1 Score: 229 bits (585), Expect = 9.91e-74 Identity = 120/127 (94.49%), Postives = 123/127 (96.85%), Query Frame = 0
BLAST of Cucsat.G13235.T3 vs. ExPASy TrEMBL
Match: A0A1S3B7S8 (tankyrase-2 OS=Cucumis melo OX=3656 GN=LOC103486958 PE=4 SV=1) HSP 1 Score: 229 bits (585), Expect = 9.91e-74 Identity = 120/127 (94.49%), Postives = 123/127 (96.85%), Query Frame = 0
BLAST of Cucsat.G13235.T3 vs. ExPASy TrEMBL
Match: A0A6J1J0G2 (tankyrase-2 OS=Cucurbita maxima OX=3661 GN=LOC111482337 PE=4 SV=1) HSP 1 Score: 196 bits (498), Expect = 3.12e-60 Identity = 105/127 (82.68%), Postives = 114/127 (89.76%), Query Frame = 0
BLAST of Cucsat.G13235.T3 vs. ExPASy TrEMBL
Match: A0A6J1F5A2 (uncharacterized protein LOC111442259 OS=Cucurbita moschata OX=3662 GN=LOC111442259 PE=4 SV=1) HSP 1 Score: 195 bits (495), Expect = 8.86e-60 Identity = 105/126 (83.33%), Postives = 113/126 (89.68%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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