Cucsat.G13228.T7 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATTTGAATTTTTTTTAGTACAATAATTATGTAAATGGGAGATCAAATTTTTAGGAGATTGAATTCTCAACCTCAAGGATATACTTGCCATTTGTCTTGCGTGTCAATTACCAATATTGGATATCAATGATGAACCTTCCTGCTATACTTAATCACCAGGCAAGCAAAACCACCTAATTTAATTAAGGTGGCCCTCAAGAATTTGACTCGCCAAACTTTTGAAGTGTAAAATACAGATCATTCTATTACCCTCCATTAACAATCTTTCTCTAAAAATGTCTCTCTCACATGTTCCCCTTCAAATACTATTGTTATCCCCCCACCACACACTTATCTATCCAACGAACTAGGGAGAAGGCTTGCAATAAGGAAATCTTTTGAGAAAATTGTATGATAGAGAAGCAGATATTTGCTTAGAGCAGAGTAGTTGAGTGATATGTTTCTTCAGAAAGAGACTTTCTTTTCTCATTAAAAAGAATCTTTAATATGAGGCAACAAAGAGAATAACTTTTACGCTTATGGAAGTTAGAAGGATTAATTTATTAAGAGAACTCAATAATTTAGAGTTGGTTTTTTTCACTCTGGACAAAAATATGTAATCCATTCACATCCTCCATAAGTCATAACAAAGTAATAGGGCGGAGAAATTTAAATAGTACTTGTGCTGTTGGCTGGGGAAATCTTCCGTAATTCCTTTCTAGTGAGAAGAAAAAATTCACCTCCTAACTAAACATAAATTATGGAGTACTCATGCTATATGTTTCTCCCTCTACTTGAATGACTAATCTCACAGTTGAGAAAATGTAGGGCAACAATGACATATACCAAATATGAAAACATGGATAATCCCTGATAAAATTTGGAGGAAATGAAAAAATGCAAGTAATTTCAATCACCACAATCTCCAATTTACCAAAAAAAAAAGAATCAATAATTAAACCCATTTCATGACAAACCAATGATATTTAATAGATTTATACAACATTGTTGTTCTGAAAAAGTATAATAATGTCGAAGAAGTTTAGCAAGTATTGCCTACAATTCCAAATCTCATTTCCTGTTGCCTACAATTCTATCTGAAGCATGAGCTTTCTTATAGACATTATAATCTTTCATTTCGGTCAACCCCTCAATTATGTAAGATTTATAACTAAAATACAGCATTGAAATAAGTGGCAATAACTCTTCAAACACTCTGAAAGTAAACCTTCAAATCAAAATGCTATCATTCACAAGGAAAACATAAAGTACTAGAATCTCTATAGGCTTTTTGTCTCTAACTTCATTTATAGTTTTCGGTCCCAAGTTTTCTTTTGATTTTCCTTTTTTGTTTTAAAAAATAGAACAAAACCATGAAGGAATAATTTTCCGTTCGGTGAAAAAGGAAGGAAAATAAAAAATGATAGTATAATGTCTGTCTCTCGATGCAAACAAAATAGTCAAGAGAAAAAAAAGAGTGAAAAATAAGCACTATGAAAATAACCTAAATCTTGGTAAGAAATTTTTAAAAATGATAACAATAATAATGATGATGAGGCTGAAAAGAGCCAAGAGCGACTACAAATGGAGAAATCCAGAGGGAACTAACTTGAGAGAGAGACCACAGGGGAAAAACACAAAAGAGAGCCCACCAAAGCAAATGAACTACTTGAATGACTTTAACTCATTTCAACAATAAAACCTTGAAAGTGGACAAAACCAATGTAGTTTCAACTGTGCAGGAAGGGGAGAAGTAGTTACCTGTTCAGAGCAAGAGAATTCAGACTTGTTTTACAGTGTACTTGGAGGCCTTGGTCAGTTCGGCATCATCACAAGGGCGAGGATATCTCTAGAATTAGCACCAAAAATGGTAATATACCCTGCATTCCATCAGAATAGGTATATAATATAAAACTTTGTGATATCTTGTAATGTATAACACAATCCACCATCTTTTGTCAGGTAAAGTGGATAAGAACCTTGTATTCAGACTTTGCCATATTCTCCAAGGACCAGGAGCATCTGATATCCTCCAAATATTCCTTTGATTATATCGAAGGTTTTGTTCTAATAAATAGAACTGGTATTCTCAACAATTGGAGATCTTCCTTTGATCCCAAAGATCCAGTTCAAGCGAGCCAATTCGTCACAGATAGGACAACTCTGTATTGTCTAGAAATGGCCATGTACTTCAACTCTGAAGAGAAAGAAACTATGAACAAGGTGAGCAATTCAATAAACATTATCAGATATCATGCTCAGGTCTGGGGCAGGGAGGAAGAAATGTTTACCATAT ATGGTAAAGTGGATAAGAACCTTGTATTCAGACTTTGCCATATTCTCCAAGGACCAGGAGCATCTGATATCCTCCAAATATTCCTTTGATTATATCGAAGGTTTTGTTCTAATAAATAGAACTGGTATTCTCAACAATTGGAGATCTTCCTTTGATCCCAAAGATCCAGTTCAAGCGAGCCAATTCGTCACAGATAGGACAACTCTGTATTGTCTAGAAATGGCCATGTACTTCAACTCTGAAGAGAAAGAAACTATGAACAAGGTGAGCAATTCAATAAACATTATCAGATATCATGCTCAGGTCTGGGGCAGGGAGGAAGAAATGTTTACCATA MVKWIRTLYSDFAIFSKDQEHLISSKYSFDYIEGFVLINRTGILNNWRSSFDPKDPVQASQFVTDRTTLYCLEMAMYFNSEEKETMNKVSNSINIIRYHAQVWGREEEMFTI Homology
BLAST of Cucsat.G13228.T7 vs. ExPASy Swiss-Prot
Match: Q5JLP4 (Cytokinin dehydrogenase 4 OS=Oryza sativa subsp. japonica OX=39947 GN=CKX4 PE=2 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 2.5e-29 Identity = 61/99 (61.62%), Postives = 78/99 (78.79%), Query Frame = 0
BLAST of Cucsat.G13228.T7 vs. ExPASy Swiss-Prot
Match: O22213 (Cytokinin dehydrogenase 1 OS=Arabidopsis thaliana OX=3702 GN=CKX1 PE=1 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 3.3e-29 Identity = 57/93 (61.29%), Postives = 73/93 (78.49%), Query Frame = 0
BLAST of Cucsat.G13228.T7 vs. ExPASy Swiss-Prot
Match: Q75K78 (Cytokinin dehydrogenase 9 OS=Oryza sativa subsp. japonica OX=39947 GN=CKX9 PE=2 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 8.1e-28 Identity = 55/93 (59.14%), Postives = 74/93 (79.57%), Query Frame = 0
BLAST of Cucsat.G13228.T7 vs. ExPASy Swiss-Prot
Match: Q9LY71 (Cytokinin dehydrogenase 6 OS=Arabidopsis thaliana OX=3702 GN=CKX6 PE=2 SV=2) HSP 1 Score: 118.2 bits (295), Expect = 5.8e-26 Identity = 56/100 (56.00%), Postives = 76/100 (76.00%), Query Frame = 0
BLAST of Cucsat.G13228.T7 vs. ExPASy Swiss-Prot
Match: Q67YU0 (Cytokinin dehydrogenase 5 OS=Arabidopsis thaliana OX=3702 GN=CKX5 PE=2 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 8.4e-17 Identity = 40/90 (44.44%), Postives = 65/90 (72.22%), Query Frame = 0
BLAST of Cucsat.G13228.T7 vs. NCBI nr
Match: KAE8651195.1 (hypothetical protein Csa_001352 [Cucumis sativus]) HSP 1 Score: 182 bits (462), Expect = 2.89e-52 Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0
BLAST of Cucsat.G13228.T7 vs. NCBI nr
Match: XP_004136791.1 (cytokinin dehydrogenase 9 [Cucumis sativus]) HSP 1 Score: 182 bits (462), Expect = 4.03e-52 Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0
BLAST of Cucsat.G13228.T7 vs. NCBI nr
Match: XP_022983738.1 (cytokinin dehydrogenase 4-like [Cucurbita maxima]) HSP 1 Score: 178 bits (452), Expect = 1.16e-50 Identity = 87/99 (87.88%), Postives = 93/99 (93.94%), Query Frame = 0
BLAST of Cucsat.G13228.T7 vs. NCBI nr
Match: XP_038905786.1 (cytokinin dehydrogenase 6-like [Benincasa hispida]) HSP 1 Score: 178 bits (451), Expect = 1.62e-50 Identity = 85/88 (96.59%), Postives = 86/88 (97.73%), Query Frame = 0
BLAST of Cucsat.G13228.T7 vs. NCBI nr
Match: KAA0053823.1 (cytokinin dehydrogenase 1-like [Cucumis melo var. makuwa] >TYK25578.1 cytokinin dehydrogenase 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 177 bits (449), Expect = 2.31e-50 Identity = 84/88 (95.45%), Postives = 87/88 (98.86%), Query Frame = 0
BLAST of Cucsat.G13228.T7 vs. ExPASy TrEMBL
Match: A0A0A0LF55 (Cytokinin dehydrogenase OS=Cucumis sativus OX=3659 GN=Csa_3G823030 PE=3 SV=1) HSP 1 Score: 182 bits (462), Expect = 6.77e-54 Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0
BLAST of Cucsat.G13228.T7 vs. ExPASy TrEMBL
Match: A0A6J1J8K4 (Cytokinin dehydrogenase OS=Cucurbita maxima OX=3661 GN=LOC111482266 PE=3 SV=1) HSP 1 Score: 178 bits (452), Expect = 5.62e-51 Identity = 87/99 (87.88%), Postives = 93/99 (93.94%), Query Frame = 0
BLAST of Cucsat.G13228.T7 vs. ExPASy TrEMBL
Match: A0A5D3DPV6 (Cytokinin dehydrogenase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007350 PE=3 SV=1) HSP 1 Score: 177 bits (449), Expect = 1.12e-50 Identity = 84/88 (95.45%), Postives = 87/88 (98.86%), Query Frame = 0
BLAST of Cucsat.G13228.T7 vs. ExPASy TrEMBL
Match: A0A1S3B8H8 (Cytokinin dehydrogenase OS=Cucumis melo OX=3656 GN=LOC103486946 PE=3 SV=1) HSP 1 Score: 177 bits (449), Expect = 1.54e-50 Identity = 84/88 (95.45%), Postives = 87/88 (98.86%), Query Frame = 0
BLAST of Cucsat.G13228.T7 vs. ExPASy TrEMBL
Match: A0A6J1F2R1 (Cytokinin dehydrogenase OS=Cucurbita moschata OX=3662 GN=LOC111441651 PE=3 SV=1) HSP 1 Score: 173 bits (438), Expect = 6.12e-49 Identity = 82/88 (93.18%), Postives = 85/88 (96.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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