Cucsat.G13212.T8 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CCGCTCTCCTACTCCATCTCTCTAATTCCCTCGATTCCTTTTTTTTTTTCTGATTTTTCATTCTCCCTTCTCCTTCTTCCGATTTTGTCTCCGTTTCTGCCTTTTTCCGCTACTTCTCTCTTCATTCCTACTGTTTCTTTTTTCCTCTCACTTTGAAGCTGGTTTAGGGTTTTTTTTTTTTTTTTGGTTCTCCCCCCCTGTTTTTAGTTTTATGGTTCTTGGCGGTCATTGCGGTGGAATCATTGACATACTATGTGATCTCTTTGCTAATGACTTTCGTCATAAGTTATTCTGTTGACTATCGGGGTTTTTCGTTGTTTGTTAATCGTTATTCTTGTTTTGTTTTTAAGATTTTTTATTGTTTGGGTGGTTTATTTTTGTTGGGATCATTTTTGGGAAGGGGATTTTTAGACTGCTGGAAGAATGTTCGTGCATGCAGAATCGATTAACTGTAAAGCTTGTGCATCACTGTTGTAAGTTGAGGGTTAATGTGAAGAAAAAAGATTTGGATATTGTATGTGTCCAAATCATTGTTTGATCGGGTCAGGTGGTCAACAAAAATGACAGGGTTTGGTTAAATTTGGTGTCGTGAGAGCCTTGTGGTTTAGGTTTGAGGTCGTTTCTGAATGGTGGTTGTTGTTGTTGTTTTTTTTTTTAATTTTTTTTTTTATTTGGTATTGTTTTTGTTACCAAACTCAATGATTTCTCATTATTGGTTTGCATTGTTGGAGTGGATTGTGTACTTTAAGGCAGTTTGACATTATTGTAACCTATTCTTGTGAATCTCTTCATCAAGTTATAAGCAGACCAGAGTAGTTGCTGTTTCTTGACATAGGTTCTATATATTTTTTTTAAATTCTAAAATATTATTGTTTCAATAGTGTTCATATTACATCTAGTTGGTTTAATGCAAGCCTTTATATCATTCCTCTGTTACGGAAAAAAGTTGTCTTCAATAATGCTTTTTATGGATGCATTAATTATAGGATTTGACTTGAGTGTAATAATAGGATTTTCAGAGAGGTTGAGAGGTCGTTTGATGAGGTTTAATGCATCTTTTAGGGCTTTGGTTATTAGGCTTTCTAGTAATTATGATTTGTGTGATTTTATTGGATCTGAGTTCGTTTCTGTAGATAGTTCTTGAACTTCTTTTGTCAGGCTTTCTGTATGTCCTTGTTATTCTAATGAACGTCCAGTTTCTAACCAAAAGAAGGAGTAAATTAAGAAAAGAAAAAGAAAGACGATGCCCCTATGCAGACTGTGGAAATTAGAGAAAATGAAAATGAAAAGTTAAGGAGCAATGCAAGAAATTTCTGGAACATGTAAAGTATATCTTGATTCCTTATAGTATGCCACACAGGACAAGTGTTTTAGTTTCTTCCAGAAGATATCTTTTTCTGATTATTTAATTTTTAACTTAAAATTTATTCCCTCAGTCCTTTTTTTCTACAGGATTTCTGTTGAGTGAAGAATATGTCAAATTGCATGACATGATAGATTTGTTCTTTCATTTAACAACTACTTATTTTAGACTTGACAGTTGGCATGAACCTTGGTTATATTTTGCTTCTGCAGCTCAAAGCTCTTTGCATCTGAAAGTTATATGGTTTCGTCATTCAACTTATATTTGGTGCACTGAACTGCTTTCCTTAGTCCCAAACTATCCATCTCCGGTAATTTGCATTCAGATCCTGCAGTGGAGGAACAGTGCTGGATAGAGTCTTTAAGAATGTCAAGTGGACCGATGAGAAGAGTCTCACGCCAAGATATTCAGTTGGTAAGCTGAAGTGTTCTTGGTCCAGTCCAGCCCTTATCATCACTCTATCTCTCTCTCCCCTATTTGTAGGCGTCAAAATTGTTGACAAACTAAGCTTCACCAAATAAATATAAATGGGGCGCTATATGTCAATGTTTAACAAAAACAGGAAAGCAAAAGATAGTTTTGATTTCTCCATTTCTTTTAGACTCTTTTTACAGATAAAAGAAATTATATTCCGCTGCAGTTATGTTTTGAATCGTTATGACACTTTTTTGTTCAACCATTCAACTTTTCTTTTATGAGATAACGGCGTGCTACATTATTTCCAATCTTTCTGATGCTAGGTGCAAAATCTTATTGAACGATGCCTTCAGCTATACATGAACCAAAAGGAAGTTGTGGAGACACTGCTGAATCAAGCTAAAATTGAGCCTGGTTTTACAGAACTTGGTAACAACGACTTCATATTTCTTGCTTCCCTTTTTCACCCTTGCTTATGCAGTTAATAGCGATTGAAATCGTGAGAGATGTTATGAGAGGATTATTATATCAGAACTAATAGGCACAGTATTGCTTTCCTGGTTTTTTTTCTCATAGAAATTTGATCCTAATGCTCATGCCAGGCTCACAAATTTCTTAGTTCGATGTTATATTTGCTTTGTCACTGAACTTTCAGACAGTTGATAATTCTGGATTGGTCATATTCTACAGTAGATATTCCTGTTGTCTTACAGCAATTTAATGAATTTCCTGCACTCTAGTTTGGCAAAAACTTGAAGAAGAGAATCGTGAATTCTTCAGGGAGTATTATCTGAGATTAATGGTGAAGCGTCAGATAGTTGAATTCAACAGGTTGCTTGAGCAACAAGTTCGGATGATGCAAATACAGGAAACTGGAGCTACTCCATTACCCACTTCCAATGGATCGCTAGTTCAACAAAGTGAGTGTGCTTTGCTATTATCTTACTTTCTTTGCCCTTTTTTCCCTTTTATTCTTTTGTTTTACTGTAGGAGTTTGCCTTTTTCCATTTTTCTTCTTTTATTACACTTCTTATGGTTTTCACCTGGAAATGTCTCGTGTATATAATTTATTCTAAGTTTTATTATATTAGGCGTAACCTTGCTTCACTTGACCAATAGTTTTTGACATTCAATCTTTGAACAGTGCACCAGAATCCAACATATTCGGTATCTTCACTGAAGCAGAATAATGTGCAGCATCCTTTTGGTAACAGCATGCCTAACAATGCATATCTCAACGGTGCTATGTCATTGCATTCGAGAATGCATCCCACAGTTGACATGTCTGCACATCCAAGTAGGATCGAAGCACCACCGTCTATACTACCAACCCAAAGCTCGAACATAGGGTTGAATGGTAGGACAATAAAATCTGAAGCTGGATATTCAGGAAATTCCTCTTATATGTTTGGTGGTGTTGATAGCAATGTAGTGGAACCACGCCAAACAATAGGCGATGTATCGGTGGCACCTTTCTCTGGCATGGAGTCCAATGCTCAAGCCATGAATGAACCACTCCTGGAACCAGATACTTCCTCTTTTGGATTTCTTGGTCAGATCCCTCGGAATTTCAGCCTATCAGATCTAACAGCCGACTTTTCGCAGAGTTCAGGTCTGTGGTGTTTTCTTGCTGTTTTATATGGAAGCTGGAAATTTTATGTTCAGCTTATAAACATTAGAGAGTGTATAACTTGTTTGATGATGTATTCAGCTTAGAACTTCAACTGTTTGTAATTATATATTTTAAACACTGCTTGATACCATCAGATATACTGGAAAGCTATGCCAGATCTCCTTTTCTAGCTACAGAAACCGACAACTTCATGGATATTCGTCATAGAGAACACCAAGGTGCGAATCGTTTTTACATACCAAATCTTACAGTTCGATTGCTAGAAAGATTTACTGACTTCATCCATCTTCTTTTACATACTTAGAAGACAATAAAAGGTCATTGGATACCATATCAGAAGGCTTGAGTTATGAGGACTTTGGAAGTGACTCATGAAATCATATTCTCTGTTTGATTAGATTAAGGTACTCTTTTTTAAACTCTATTTGATCATGCTTATTCCATCAGTCATTTCCAAATTTTCTGTTTTAGTTCACAACTCATGAAATTTAATGAACAAAACAGTAGTAGGATTTTAACCTCTTTTCTTAGTTTTATTTACACATCTGCTGATGCTTAATTTGTGTTCATTTTATGCAGGTCTTTATTTTATTTTGGAGGAAAGGGGGGTTTGACTAATAATGTTTGGGAAGTTTCAAACTGAAAATGCATCAGATTTGGGGTTTTCTTATAAAAAAAAAAGCAAATGGAAGAAAAGCACAAGCTTCTGATTATACTGACATAAAAATGTGTAGTGGTAAAAGCTTTGAGTCGACTTCAGAAATGTATGTAAAGTCATGATTTTCTTTTTATCAAGTTTGGTTTTGGCCTCCATTAATGATCTTTTGGTAGGATTTGTTAGCTGTCTTGGTTCGTTTTTTTTTTTCTTAAATCTTTGGTCAAAATTAAGTGTAACAATATTTAGATGACGTTTTCGTTTGTTTTGTTTAGCTTATGATTTGAATTAATCAAATAGTTTGGTGCCTTTTGATCTCAAATTTCAACTATTTTAATATACAG ATGGTGAAGCGTCAGATAGTTGAATTCAACAGGTTGCTTGAGCAACAAGTTCGGATGATGCAAATACAGGAAACTGGAGCTACTCCATTACCCACTTCCAATGGATCGCTAGTTCAACAAATGCACCAGAATCCAACATATTCGGTATCTTCACTGAAGCAGAATAATGTGCAGCATCCTTTTGGTAACAGCATGCCTAACAATGCATATCTCAACGGTGCTATGTCATTGCATTCGAGAATGCATCCCACAGTTGACATGTCTGCACATCCAAGTAGGATCGAAGCACCACCGTCTATACTACCAACCCAAAGCTCGAACATAGGGTTGAATGGTAGGACAATAAAATCTGAAGCTGGATATTCAGGAAATTCCTCTTATATGTTTGGTGGTGTTGATAGCAATGTAGTGGAACCACGCCAAACAATAGGCGATGTATCGGTGGCACCTTTCTCTGGCATGGAGTCCAATGCTCAAGCCATGAATGAACCACTCCTGGAACCAGATACTTCCTCTTTTGGATTTCTTGGTCAGATCCCTCGGAATTTCAGCCTATCAGATCTAACAGCCGACTTTTCGCAGAGTTCAGATATACTGGAAAGCTATGCCAGATCTCCTTTTCTAGCTACAGAAACCGACAACTTCATGGATATTCGTCATAGAGAACACCAAGAAGACAATAAAAGGTCATTGGATACCATATCAGAAGGCTTGAGTTATGAGGACTTTGGAAGTGACTCATGA MVKRQIVEFNRLLEQQVRMMQIQETGATPLPTSNGSLVQQMHQNPTYSVSSLKQNNVQHPFGNSMPNNAYLNGAMSLHSRMHPTVDMSAHPSRIEAPPSILPTQSSNIGLNGRTIKSEAGYSGNSSYMFGGVDSNVVEPRQTIGDVSVAPFSGMESNAQAMNEPLLEPDTSSFGFLGQIPRNFSLSDLTADFSQSSDILESYARSPFLATETDNFMDIRHREHQEDNKRSLDTISEGLSYEDFGSDS Homology
BLAST of Cucsat.G13212.T8 vs. NCBI nr
Match: XP_004136645.1 (uncharacterized protein LOC101221043 isoform X1 [Cucumis sativus] >XP_011652196.1 uncharacterized protein LOC101221043 isoform X1 [Cucumis sativus] >XP_031738265.1 uncharacterized protein LOC101221043 isoform X1 [Cucumis sativus] >KGN59460.1 hypothetical protein Csa_002549 [Cucumis sativus]) HSP 1 Score: 478 bits (1230), Expect = 1.00e-168 Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0
BLAST of Cucsat.G13212.T8 vs. NCBI nr
Match: XP_011652197.1 (uncharacterized protein LOC101221043 isoform X2 [Cucumis sativus]) HSP 1 Score: 472 bits (1214), Expect = 2.64e-166 Identity = 246/247 (99.60%), Postives = 246/247 (99.60%), Query Frame = 0
BLAST of Cucsat.G13212.T8 vs. NCBI nr
Match: XP_008443277.1 (PREDICTED: uncharacterized protein LOC103486898 isoform X1 [Cucumis melo] >XP_008443278.1 PREDICTED: uncharacterized protein LOC103486898 isoform X1 [Cucumis melo] >KAA0053869.1 A_thal_3526 domain-containing protein [Cucumis melo var. makuwa] >TYK25535.1 A_thal_3526 domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 468 bits (1204), Expect = 9.14e-165 Identity = 242/247 (97.98%), Postives = 245/247 (99.19%), Query Frame = 0
BLAST of Cucsat.G13212.T8 vs. NCBI nr
Match: XP_008443279.1 (PREDICTED: uncharacterized protein LOC103486898 isoform X2 [Cucumis melo]) HSP 1 Score: 462 bits (1188), Expect = 2.41e-162 Identity = 241/247 (97.57%), Postives = 244/247 (98.79%), Query Frame = 0
BLAST of Cucsat.G13212.T8 vs. NCBI nr
Match: XP_038904690.1 (uncharacterized protein LOC120090996 isoform X3 [Benincasa hispida]) HSP 1 Score: 445 bits (1145), Expect = 2.43e-156 Identity = 231/247 (93.52%), Postives = 236/247 (95.55%), Query Frame = 0
BLAST of Cucsat.G13212.T8 vs. ExPASy TrEMBL
Match: A0A0A0LBS1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G822120 PE=4 SV=1) HSP 1 Score: 478 bits (1230), Expect = 4.85e-169 Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0
BLAST of Cucsat.G13212.T8 vs. ExPASy TrEMBL
Match: A0A1S3B8D0 (uncharacterized protein LOC103486898 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486898 PE=4 SV=1) HSP 1 Score: 468 bits (1204), Expect = 4.43e-165 Identity = 242/247 (97.98%), Postives = 245/247 (99.19%), Query Frame = 0
BLAST of Cucsat.G13212.T8 vs. ExPASy TrEMBL
Match: A0A5D3DPW6 (A_thal_3526 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006870 PE=4 SV=1) HSP 1 Score: 468 bits (1204), Expect = 4.43e-165 Identity = 242/247 (97.98%), Postives = 245/247 (99.19%), Query Frame = 0
BLAST of Cucsat.G13212.T8 vs. ExPASy TrEMBL
Match: A0A1S3B764 (uncharacterized protein LOC103486898 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486898 PE=4 SV=1) HSP 1 Score: 462 bits (1188), Expect = 1.17e-162 Identity = 241/247 (97.57%), Postives = 244/247 (98.79%), Query Frame = 0
BLAST of Cucsat.G13212.T8 vs. ExPASy TrEMBL
Match: A0A6J1DW65 (uncharacterized protein LOC111025014 OS=Momordica charantia OX=3673 GN=LOC111025014 PE=4 SV=1) HSP 1 Score: 421 bits (1082), Expect = 1.61e-146 Identity = 221/246 (89.84%), Postives = 230/246 (93.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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