Cucsat.G13212.T12 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATAATCGTATGGAAAGGAAAGGAGCAGCCGATCAAAACACCCAAAAAAGCAAAAACACAAAACCGCTATTCATTGATCAACCCAACAAAATATTACATATAAATTATAAACAAAAAAAAAAGCCACAAACTCCAAATCAAAATTCCCTTCTTCAATTTTCCCTCAATTTCTTCCTCTTAATCAAAACCTTCCCTCCAATTCCTTCTCTCCTTCTTCAATCCGATTCAGGTATGATCCACCCCGCTCTCCTACTCCATCTCTCTAATTCCCTCGATTCCTTTTTTTTTTTCTGATTTTTCATTCTCCCTTCTCCTTCTTCCGATTTTGTCTCCGTTTCTGCCTTTTTCCGCTACTTCTCTCTTCATTCCTACTGTTTCTTTTTTCCTCTCACTTTGAAGCTGGTTTAGGGTTTTTTTTTTTTTTTTGGTTCTCCCCCCCTGTTTTTAGTTTTATGGTTCTTGGCGGTCATTGCGGTGGAATCATTGACATACTATGTGATCTCTTTGCTAATGACTTTCGTCATAAGTTATTCTGTTGACTATCGGGGTTTTTCGTTGTTTGTTAATCGTTATTCTTGTTTTGTTTTTAAGATTTTTTATTGTTTGGGTGGTTTATTTTTGTTGGGATCATTTTTGGGAAGGGGATTTTTAGACTGCTGGAAGAATGTTCGTGCATGCAGAATCGATTAACTGTAAAGCTTGTGCATCACTGTTGTAAGTTGAGGGTTAATGTGAAGAAAAAAGATTTGGATATTGTATGTGTCCAAATCATTGTTTGATCGGGTCAGGTGGTCAACAAAAATGACAGGGTTTGGTTAAATTTGGTGTCGTGAGAGCCTTGTGGTTTAGGTTTGAGGTCGTTTCTGAATGGTGGTTGTTGTTGTTGTTTTTTTTTTTAATTTTTTTTTTTATTTGGTATTGTTTTTGTTACCAAACTCAATGATTTCTCATTATTGGTTTGCATTGTTGGAGTGGATTGTGTACTTTAAGGCAGTTTGACATTATTGTAACCTATTCTTGTGAATCTCTTCATCAAGTTATAAGCAGACCAGAGTAGTTGCTGTTTCTTGACATAGGTTCTATATATTTTTTTTAAATTCTAAAATATTATTGTTTCAATAGTGTTCATATTACATCTAGTTGGTTTAATGCAAGCCTTTATATCATTCCTCTGTTACGGAAAAAAGTTGTCTTCAATAATGCTTTTTATGGATGCATTAATTATAGGATTTGACTTGAGTGTAATAATAGGATTTTCAGAGAGGTTGAGAGGTCGTTTGATGAGGTTTAATGCATCTTTTAGGGCTTTGGTTATTAGGCTTTCTAGTAATTATGATTTGTGTGATTTTATTGGATCTGAGTTCGTTTCTGTAGATAGTTCTTGAACTTCTTTTGTCAGGCTTTCTGTATGTCCTTGTTATTCTAATGAACGTCCAGTTTCTAACCAAAAGAAGGAGTAAATTAAGAAAAGAAAAAGAAAGACGATGCCCCTATGCAGACTGTGGAAATTAGAGAAAATGAAAATGAAAAGTTAAGGAGCAATGCAAGAAATTTCTGGAACATGTAAAGTATATCTTGATTCCTTATAGTATGCCACACAGGACAAGTGTTTTAGTTTCTTCCAGAAGATATCTTTTTCTGATTATTTAATTTTTAACTTAAAATTTATTCCCTCAGTCCTTTTTTTCTACAGGATTTCTGTTGAGTGAAGAATATGTCAAATTGCATGACATGATAGATTTGTTCTTTCATTTAACAACTACTTATTTTAGACTTGACAGTTGGCATGAACCTTGGTTATATTTTGCTTCTGCAGCTCAAAGCTCTTTGCATCTGAAAGTTATATGGTTTCGTCATTCAACTTATATTTGGTGCACTGAACTGCTTTCCTTAGTCCCAAACTATCCATCTCCGGTAATTTGCATTCAGATCCTGCAGTGGAGGAACAGTGCTGGATAGAGTCTTTAAGAATGTCAAGTGGACCGATGAGAAGAGTCTCACGCCAAGATATTCAGTTGGTAAGCTGAAGTGTTCTTGGTCCAGTCCAGCCCTTATCATCACTCTATCTCTCTCTCCCCTATTTGTAGGCGTCAAAATTGTTGACAAACTAAGCTTCACCAAATAAATATAAATGGGGCGCTATATGTCAATGTTTAACAAAAACAGGAAAGCAAAAGATAGTTTTGATTTCTCCATTTCTTTTAGACTCTTTTTACAGATAAAAGAAATTATATTCCGCTGCAGTTATGTTTTGAATCGTTATGACACTTTTTTGTTCAACCATTCAACTTTTCTTTTATGAGATAACGGCGTGCTACATTATTTCCAATCTTTCTGATGCTAGGTGCAAAATCTTATTGAACGATGCCTTCAGCTATACATGAACCAAAAGGAAGTTGTGGAGACACTGCTGAATCAAGCTAAAATTGAGCCTGGTTTTACAGAACTTGGTAACAACGACTTCATATTTCTTGCTTCCCTTTTTCACCCTTGCTTATGCAGTTAATAGCGATTGAAATCGTGAGAGATGTTATGAGAGGATTATTATATCAGAACTAATAGGCACAGTATTGCTTTCCTGGTTTTTTTTCTCATAGAAATTTGATCCTAATGCTCATGCCAGGCTCACAAATTTCTTAGTTCGATGTTATATTTGCTTTGTCACTGAACTTTCAGACAGTTGATAATTCTGGATTGGTCATATTCTACAGTAGATATTCCTGTTGTCTTACAGCAATTTAATGAATTTCCTGCACTCTAGTTTGGCAAAAACTTGAAGAAGAGAATCGTGAATTCTTCAGGGAGTATTATCTGAGATTAATGGTGAAGCGTCAGATAGTTGAATTCAACAGGTTGCTTGAGCAACAAGTTCGGATGATGCAAATACAGGAAACTGGAGCTACTCCATTACCCACTTCCAATGGATCGCTAGTTCAACAAAGTGAGTGTGCTTTGCTATTATCTTACTTTCTTTGCCCTTTTTTCCCTTTTATTCTTTTGTTTTACTGTAGGAGTTTGCCTTTTTCCATTTTTCTTCTTTTATTACACTTCTTATGGTTTTCACCTGGAAATGTCTCGTGTATATAATTTATTCTAAGTTTTATTATATTAGGCGTAACCTTGCTTCACTTGACCAATAGTTTTTGACATTCAATCTTTGAACAGTGCACCAGAATCCAACATATTCGGTATCTTCACTGAAGCAGAATAATGTGCAGCATCCTTTTGGTAACAGCATGCCTAACAATGCATATCTCAACGGTGCTATGTCATTGCATTCGAGAATGCATCCCACAGTTGACATGTCTGCACATCCAAGTAGGATCGAAGCACCACCGTCTATACTACCAACCCAAAGCTCGAACATAGGGTTGAATGGTAGGACAATAAAATCTGAAGCTGGATATTCAGGAAATTCCTCTTATATGTTTGGTGGTGTTGATAGCAATGTAGTGGAACCACGCCAAACAATAGGCGATGTATCGGTGGCACCTTTCTCTGGCATGGAGTCCAATGCTCAAGCCATGAATGAACCACTCCTGGAACCAGATACTTCCTCTTTTGGATTTCTTGGTCAGATCCCTCGGAATTTCAGCCTATCAGATCTAACAGCCGACTTTTCGCAGAGTTCAGGTCTGTGGTGTTTTCTTGCTGTTTTATATGGAAGCTGGAAATTTTATGTTCAGCTTATAAACATTAGAGAGTGTATAACTTGTTTGATGATGTATTCAGCTTAGAACTTCAACTGTTTGTAATTATATATTTTAAACACTGCTTGATACCATCAGATATACTGGAAAGCTATGCCAGATCTCCTTTTCTAGCTACAGAAACCGACAACTTCATGGATATTCGTCATAGAGAACACCAAGGTGCGAATCGTTTTTACATACCAAATCTTACAGTTCGATTGCTAGAAAGATTTACTGACTTCATCCATCTTCTTTTACATACTTAGAAGACAATAAAAGGTCATTGGATACCATATCAGAAGGCTTGAGTTATGAGGACTTTGGAAGTGACTCATGAAATCATATTCTCTGTTTGATTAGATTAAGGTACTCTTTTTTAAACTCTATTTGATCATGCTTATTCCATCAGTCATTTCCAAATTTTCTGTTTTAGTTCACAACTCATGAAATTTAATGAACAAAACAGTAGTAGGATTTTAACCTCTTTTCTTAGTTTTATTTACACATCTGCTGATGCTTAATTTGTGTTCATTTTATGCAGGTCTTTATTTTATTTTGGAGGAAAGGGGGGTTTGACTAATAATGTTTGGGAAGTTTCAAACTGAAAATGCATCAGATTTGGGGTTTTCTTATAAAAAAAAAAGCAAATGGAAGAAAAGCACAAGCTTCTGATTATACTGACATAAAAATGTGTAGTGGTAAAAGCTTTGAGTCGACTTCAGAAATGTATGTAAAGTCATGATTTTCTTTTTATCAAGTTTGGTTTTGGCCTCCATTAATGATCTTTTGGTAGGATTTGTTAGCTGTCTTGGTTCGTTTTTTTTTTTCTTAAATCTTTGGTCAAAATTAAGTGTAACAATATTTAGATGACGTTTTCGTTTGTTTTGTTTAGCTTATGATTTGAATTAATCAAATAGTTTGGTGCCTTTTGATCTCAAATTT ATGGTGAAGCGTCAGATAGTTGAATTCAACAGGTTGCTTGAGCAACAAGTTCGGATGATGCAAATACAGGAAACTGGAGCTACTCCATTACCCACTTCCAATGGATCGCTAGTTCAACAAATGCACCAGAATCCAACATATTCGGTATCTTCACTGAAGCAGAATAATGTGCAGCATCCTTTTGGTAACAGCATGCCTAACAATGCATATCTCAACGGTGCTATGTCATTGCATTCGAGAATGCATCCCACAGTTGACATGTCTGCACATCCAAGTAGGATCGAAGCACCACCGTCTATACTACCAACCCAAAGCTCGAACATAGGGTTGAATGGTAGGACAATAAAATCTGAAGCTGGATATTCAGGAAATTCCTCTTATATGTTTGGTGGTGTTGATAGCAATGTAGTGGAACCACGCCAAACAATAGGCGATGTATCGGTGGCACCTTTCTCTGGCATGGAGTCCAATGCTCAAGCCATGAATGAACCACTCCTGGAACCAGATACTTCCTCTTTTGGATTTCTTGGTCAGATCCCTCGGAATTTCAGCCTATCAGATCTAACAGCCGACTTTTCGCAGAGTTCAGATATACTGGAAAGCTATGCCAGATCTCCTTTTCTAGCTACAGAAACCGACAACTTCATGGATATTCGTCATAGAGAACACCAAGGTGCGAATCGTTTTTACATACCAAATCTTACAGTTCGATTGCTAGAAAGATTTACTGACTTCATCCATCTTCTTTTACATACTTAG MVKRQIVEFNRLLEQQVRMMQIQETGATPLPTSNGSLVQQMHQNPTYSVSSLKQNNVQHPFGNSMPNNAYLNGAMSLHSRMHPTVDMSAHPSRIEAPPSILPTQSSNIGLNGRTIKSEAGYSGNSSYMFGGVDSNVVEPRQTIGDVSVAPFSGMESNAQAMNEPLLEPDTSSFGFLGQIPRNFSLSDLTADFSQSSDILESYARSPFLATETDNFMDIRHREHQGANRFYIPNLTVRLLERFTDFIHLLLHT Homology
BLAST of Cucsat.G13212.T12 vs. NCBI nr
Match: XP_004136645.1 (uncharacterized protein LOC101221043 isoform X1 [Cucumis sativus] >XP_011652196.1 uncharacterized protein LOC101221043 isoform X1 [Cucumis sativus] >XP_031738265.1 uncharacterized protein LOC101221043 isoform X1 [Cucumis sativus] >KGN59460.1 hypothetical protein Csa_002549 [Cucumis sativus]) HSP 1 Score: 439 bits (1130), Expect = 2.08e-153 Identity = 225/228 (98.68%), Postives = 226/228 (99.12%), Query Frame = 0
BLAST of Cucsat.G13212.T12 vs. NCBI nr
Match: XP_011652197.1 (uncharacterized protein LOC101221043 isoform X2 [Cucumis sativus]) HSP 1 Score: 439 bits (1128), Expect = 4.04e-153 Identity = 225/228 (98.68%), Postives = 225/228 (98.68%), Query Frame = 0
BLAST of Cucsat.G13212.T12 vs. NCBI nr
Match: XP_008443277.1 (PREDICTED: uncharacterized protein LOC103486898 isoform X1 [Cucumis melo] >XP_008443278.1 PREDICTED: uncharacterized protein LOC103486898 isoform X1 [Cucumis melo] >KAA0053869.1 A_thal_3526 domain-containing protein [Cucumis melo var. makuwa] >TYK25535.1 A_thal_3526 domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 429 bits (1104), Expect = 1.89e-149 Identity = 220/228 (96.49%), Postives = 224/228 (98.25%), Query Frame = 0
BLAST of Cucsat.G13212.T12 vs. NCBI nr
Match: XP_008443279.1 (PREDICTED: uncharacterized protein LOC103486898 isoform X2 [Cucumis melo]) HSP 1 Score: 429 bits (1102), Expect = 3.67e-149 Identity = 220/228 (96.49%), Postives = 223/228 (97.81%), Query Frame = 0
BLAST of Cucsat.G13212.T12 vs. NCBI nr
Match: XP_038904690.1 (uncharacterized protein LOC120090996 isoform X3 [Benincasa hispida]) HSP 1 Score: 407 bits (1045), Expect = 5.05e-141 Identity = 209/228 (91.67%), Postives = 215/228 (94.30%), Query Frame = 0
BLAST of Cucsat.G13212.T12 vs. ExPASy TrEMBL
Match: A0A0A0LBS1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G822120 PE=4 SV=1) HSP 1 Score: 439 bits (1130), Expect = 1.01e-153 Identity = 225/228 (98.68%), Postives = 226/228 (99.12%), Query Frame = 0
BLAST of Cucsat.G13212.T12 vs. ExPASy TrEMBL
Match: A0A1S3B8D0 (uncharacterized protein LOC103486898 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486898 PE=4 SV=1) HSP 1 Score: 429 bits (1104), Expect = 9.13e-150 Identity = 220/228 (96.49%), Postives = 224/228 (98.25%), Query Frame = 0
BLAST of Cucsat.G13212.T12 vs. ExPASy TrEMBL
Match: A0A5D3DPW6 (A_thal_3526 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006870 PE=4 SV=1) HSP 1 Score: 429 bits (1104), Expect = 9.13e-150 Identity = 220/228 (96.49%), Postives = 224/228 (98.25%), Query Frame = 0
BLAST of Cucsat.G13212.T12 vs. ExPASy TrEMBL
Match: A0A1S3B764 (uncharacterized protein LOC103486898 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486898 PE=4 SV=1) HSP 1 Score: 429 bits (1102), Expect = 1.78e-149 Identity = 220/228 (96.49%), Postives = 223/228 (97.81%), Query Frame = 0
BLAST of Cucsat.G13212.T12 vs. ExPASy TrEMBL
Match: A0A6J1DW65 (uncharacterized protein LOC111025014 OS=Momordica charantia OX=3673 GN=LOC111025014 PE=4 SV=1) HSP 1 Score: 388 bits (997), Expect = 1.69e-133 Identity = 201/227 (88.55%), Postives = 211/227 (92.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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