Cucsat.G13212.T11 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATAATCGTATGGAAAGGAAAGGAGCAGCCGATCAAAACACCCAAAAAAGCAAAAACACAAAACCGCTATTCATTGATCAACCCAACAAAATATTACATATAAATTATAAACAAAAAAAAAAGCCACAAACTCCAAATCAAAATTCCCTTCTTCAATTTTCCCTCAATTTCTTCCTCTTAATCAAAACCTTCCCTCCAATTCCTTCTCTCCTTCTTCAATCCGATTCAGGTATGATCCACCCCGCTCTCCTACTCCATCTCTCTAATTCCCTCGATTCCTTTTTTTTTTTCTGATTTTTCATTCTCCCTTCTCCTTCTTCCGATTTTGTCTCCGTTTCTGCCTTTTTCCGCTACTTCTCTCTTCATTCCTACTGTTTCTTTTTTCCTCTCACTTTGAAGCTGGTTTAGGGTTTTTTTTTTTTTTTTGGTTCTCCCCCCCTGTTTTTAGTTTTATGGTTCTTGGCGGTCATTGCGGTGGAATCATTGACATACTATGTGATCTCTTTGCTAATGACTTTCGTCATAAGTTATTCTGTTGACTATCGGGGTTTTTCGTTGTTTGTTAATCGTTATTCTTGTTTTGTTTTTAAGATTTTTTATTGTTTGGGTGGTTTATTTTTGTTGGGATCATTTTTGGGAAGGGGATTTTTAGACTGCTGGAAGAATGTTCGTGCATGCAGAATCGATTAACTGTAAAGCTTGTGCATCACTGTTGTAAGTTGAGGGTTAATGTGAAGAAAAAAGATTTGGATATTGTATGTGTCCAAATCATTGTTTGATCGGGTCAGGTGGTCAACAAAAATGACAGGGTTTGGTTAAATTTGGTGTCGTGAGAGCCTTGTGGTTTAGGTTTGAGGTCGTTTCTGAATGGTGGTTGTTGTTGTTGTTTTTTTTTTTAATTTTTTTTTTTATTTGGTATTGTTTTTGTTACCAAACTCAATGATTTCTCATTATTGGTTTGCATTGTTGGAGTGGATTGTGTACTTTAAGGCAGTTTGACATTATTGTAACCTATTCTTGTGAATCTCTTCATCAAGTTATAAGCAGACCAGAGTAGTTGCTGTTTCTTGACATAGGTTCTATATATTTTTTTTAAATTCTAAAATATTATTGTTTCAATAGTGTTCATATTACATCTAGTTGGTTTAATGCAAGCCTTTATATCATTCCTCTGTTACGGAAAAAAGTTGTCTTCAATAATGCTTTTTATGGATGCATTAATTATAGGATTTGACTTGAGTGTAATAATAGGATTTTCAGAGAGGTTGAGAGGTCGTTTGATGAGGTTTAATGCATCTTTTAGGGCTTTGGTTATTAGGCTTTCTAGTAATTATGATTTGTGTGATTTTATTGGATCTGAGTTCGTTTCTGTAGATAGTTCTTGAACTTCTTTTGTCAGGCTTTCTGTATGTCCTTGTTATTCTAATGAACGTCCAGTTTCTAACCAAAAGAAGGAGTAAATTAAGAAAAGAAAAAGAAAGACGATGCCCCTATGCAGACTGTGGAAATTAGAGAAAATGAAAATGAAAAGTTAAGGAGCAATGCAAGAAATTTCTGGAACATGTAAAGTATATCTTGATTCCTTATAGTATGCCACACAGGACAAGTGTTTTAGTTTCTTCCAGAAGATATCTTTTTCTGATTATTTAATTTTTAACTTAAAATTTATTCCCTCAGTCCTTTTTTTCTACAGGATTTCTGTTGAGTGAAGAATATGTCAAATTGCATGACATGATAGATTTGTTCTTTCATTTAACAACTACTTATTTTAGACTTGACAGTTGGCATGAACCTTGGTTATATTTTGCTTCTGCAGCTCAAAGCTCTTTGCATCTGAAAGTTATATGGTTTCGTCATTCAACTTATATTTGGTGCACTGAACTGCTTTCCTTAGTCCCAAACTATCCATCTCCGGTAATTTGCATTCAGATCCTGCAGTGGAGGAACAGTGCTGGATAGAGTCTTTAAGAATGTCAAGTGGACCGATGAGAAGAGTCTCACGCCAAGATATTCAGTTGGTAAGCTGAAGTGTTCTTGGTCCAGTCCAGCCCTTATCATCACTCTATCTCTCTCTCCCCTATTTGTAGGCGTCAAAATTGTTGACAAACTAAGCTTCACCAAATAAATATAAATGGGGCGCTATATGTCAATGTTTAACAAAAACAGGAAAGCAAAAGATAGTTTTGATTTCTCCATTTCTTTTAGACTCTTTTTACAGATAAAAGAAATTATATTCCGCTGCAGTTATGTTTTGAATCGTTATGACACTTTTTTGTTCAACCATTCAACTTTTCTTTTATGAGATAACGGCGTGCTACATTATTTCCAATCTTTCTGATGCTAGGTGCAAAATCTTATTGAACGATGCCTTCAGCTATACATGAACCAAAAGGAAGTTGTGGAGACACTGCTGAATCAAGCTAAAATTGAGCCTGGTTTTACAGAACTTGGTAACAACGACTTCATATTTCTTGCTTCCCTTTTTCACCCTTGCTTATGCAGTTAATAGCGATTGAAATCGTGAGAGATGTTATGAGAGGATTATTATATCAGAACTAATAGGCACAGTATTGCTTTCCTGGTTTTTTTTCTCATAGAAATTTGATCCTAATGCTCATGCCAGGCTCACAAATTTCTTAGTTCGATGTTATATTTGCTTTGTCACTGAACTTTCAGACAGTTGATAATTCTGGATTGGTCATATTCTACAGTAGATATTCCTGTTGTCTTACAGCAATTTAATGAATTTCCTGCACTCTAGTTTGGCAAAAACTTGAAGAAGAGAATCGTGAATTCTTCAGGGAGTATTATCTGAGATTAATGGTGAAGCGTCAGATAGTTGAATTCAACAGGTTGCTTGAGCAACAAGTTCGGATGATGCAAATACAGGAAACTGGAGCTACTCCATTACCCACTTCCAATGGATCGCTAGTTCAACAAAGTGAGTGTGCTTTGCTATTATCTTACTTTCTTTGCCCTTTTTTCCCTTTTATTCTTTTGTTTTACTGTAGGAGTTTGCCTTTTTCCATTTTTCTTCTTTTATTACACTTCTTATGGTTTTCACCTGGAAATGTCTCGTGTATATAATTTATTCTAAGTTTTATTATATTAGGCGTAACCTTGCTTCACTTGACCAATAGTTTTTGACATTCAATCTTTGAACAGTGCACCAGAATCCAACATATTCGGTATCTTCACTGAAGCAGAATAATGTGCAGCATCCTTTTGGTAACAGCATGCCTAACAATGCATATCTCAACGGTGCTATGTCATTGCATTCGAGAATGCATCCCACAGTTGACATGTCTGCACATCCAAGTAGGATCGAAGCACCACCGTCTATACTACCAACCCAAAGCTCGAACATAGGGTTGAATGGTAGGACAATAAAATCTGAAGCTGGATATTCAGGAAATTCCTCTTATATGTTTGGTGGTGTTGATAGCAATGTAGTGGAACCACGCCAAACAATAGGCGATGTATCGGTGGCACCTTTCTCTGGCATGGAGTCCAATGCTCAAGCCATGAATGAACCACTCCTGGAACCAGATACTTCCTCTTTTGGATTTCTTGGTCAGATCCCTCGGAATTTCAGCCTATCAGATCTAACAGCCGACTTTTCGCAGAGTTCAGGTCTGTGGTGTTTTCTTGCTGTTTTATATGGAAGCTGGAAATTTTATGTTCAGCTTATAAACATTAGAGAGTGTATAACTTGTTTGATGATGTATTCAGCTTAGAACTTCAACTGTTTGTAATTATATATTTTAAACACTGCTTGATACCATCAGATATACTGGAAAGCTATGCCAGATCTCCTTTTCTAGCTACAGAAACCGACAACTTCATGGATATTCGTCATAGAGAACACCAAGGTGCGAATCGTTTTTACATACCAAATCTTACAGTTCGATTGCTAGAAAGATTTACTGACTTCATCCATCTTCTTTTACATACTTAGAAGACAATAAAAGGTCATTGGATACCATATCAGAAGGCTTGAGTTATGAGGACTTTGGAAGTGACTCATGAAATCATATTCTCTGTTTGATTAGATTAAGGTACTCTTTTTTAAACTCTATTTGATCATGCTTATTCCATCAGTCATTTCCAAATTTTCTGTTTTAGTTCACAACTCATGAAATTTAATGAACAAAACAGTAGTAGGATTTTAACCTCTTTTCTTAGTTTTATTTACACATCTGCTGATGCTTAATTTGTGTTCATTTTATGCAGGTCTTTATTTTATTTTGGAGGAAAGGGGGGTTTGACTAATAATGTTTGGGAAGTTTCAAACTGAAAATGCATCAGATTTGGGGTTTTCTTATAAAAAAAAAAGCAAATGGAAGAAAAGCACAAGCTTCTGATTATACTGACATAAAAATGTGTAGTGGTAAAAGCTTTGAGTCGACTTCAGAAATGTATGTAAAGTCATGATTTTCTTTTTATCAAGTTTGGTTTTGGCCTCCATTAATGATCTTTTGGTAGGATTTGTTAGCTGTCTTGGTTCGTTTTTTTTTTTCTTAAATCTTTGGTCAAAATTAAGTGTAACAATATTTAGATGACGTTTTCGTTTGTTTTGTTTAGCTTATGATTTGAATTAATCAAATAGTTTGGTGCCTTTTGATCTCAAATTTCAACTATTTTAATAT ATGCCTAACAATGCATATCTCAACGGTGCTATGTCATTGCATTCGAGAATGCATCCCACAGTTGACATGTCTGCACATCCAAGTAGGATCGAAGCACCACCGTCTATACTACCAACCCAAAGCTCGAACATAGGGTTGAATGGTAGGACAATAAAATCTGAAGCTGGATATTCAGGAAATTCCTCTTATATGTTTGGTGGTGTTGATAGCAATGTAGTGGAACCACGCCAAACAATAGGCGATGTATCGGTGGCACCTTTCTCTGGCATGGAGTCCAATGCTCAAGCCATGAATGAACCACTCCTGGAACCAGATACTTCCTCTTTTGGATTTCTTGGTCAGATCCCTCGGAATTTCAGCCTATCAGATCTAACAGCCGACTTTTCGCAGAGTTCAGATATACTGGAAAGCTATGCCAGATCTCCTTTTCTAGCTACAGAAACCGACAACTTCATGGATATTCGTCATAGAGAACACCAAGAAGACAATAAAAGGTCATTGGATACCATATCAGAAGGCTTGAGTTATGAGGACTTTGGAAGTGACTCATGA MPNNAYLNGAMSLHSRMHPTVDMSAHPSRIEAPPSILPTQSSNIGLNGRTIKSEAGYSGNSSYMFGGVDSNVVEPRQTIGDVSVAPFSGMESNAQAMNEPLLEPDTSSFGFLGQIPRNFSLSDLTADFSQSSDILESYARSPFLATETDNFMDIRHREHQEDNKRSLDTISEGLSYEDFGSDS Homology
BLAST of Cucsat.G13212.T11 vs. NCBI nr
Match: XP_004136645.1 (uncharacterized protein LOC101221043 isoform X1 [Cucumis sativus] >XP_011652196.1 uncharacterized protein LOC101221043 isoform X1 [Cucumis sativus] >XP_031738265.1 uncharacterized protein LOC101221043 isoform X1 [Cucumis sativus] >KGN59460.1 hypothetical protein Csa_002549 [Cucumis sativus]) HSP 1 Score: 359 bits (922), Expect = 5.80e-123 Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0
BLAST of Cucsat.G13212.T11 vs. NCBI nr
Match: XP_011652197.1 (uncharacterized protein LOC101221043 isoform X2 [Cucumis sativus]) HSP 1 Score: 353 bits (906), Expect = 1.52e-120 Identity = 182/183 (99.45%), Postives = 182/183 (99.45%), Query Frame = 0
BLAST of Cucsat.G13212.T11 vs. NCBI nr
Match: XP_008443277.1 (PREDICTED: uncharacterized protein LOC103486898 isoform X1 [Cucumis melo] >XP_008443278.1 PREDICTED: uncharacterized protein LOC103486898 isoform X1 [Cucumis melo] >KAA0053869.1 A_thal_3526 domain-containing protein [Cucumis melo var. makuwa] >TYK25535.1 A_thal_3526 domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 349 bits (896), Expect = 5.23e-119 Identity = 178/183 (97.27%), Postives = 181/183 (98.91%), Query Frame = 0
BLAST of Cucsat.G13212.T11 vs. NCBI nr
Match: XP_008443279.1 (PREDICTED: uncharacterized protein LOC103486898 isoform X2 [Cucumis melo]) HSP 1 Score: 343 bits (880), Expect = 1.37e-116 Identity = 177/183 (96.72%), Postives = 180/183 (98.36%), Query Frame = 0
BLAST of Cucsat.G13212.T11 vs. NCBI nr
Match: XP_038904690.1 (uncharacterized protein LOC120090996 isoform X3 [Benincasa hispida]) HSP 1 Score: 332 bits (850), Expect = 1.53e-112 Identity = 170/183 (92.90%), Postives = 174/183 (95.08%), Query Frame = 0
BLAST of Cucsat.G13212.T11 vs. ExPASy TrEMBL
Match: A0A0A0LBS1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G822120 PE=4 SV=1) HSP 1 Score: 359 bits (922), Expect = 2.81e-123 Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0
BLAST of Cucsat.G13212.T11 vs. ExPASy TrEMBL
Match: A0A1S3B8D0 (uncharacterized protein LOC103486898 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486898 PE=4 SV=1) HSP 1 Score: 349 bits (896), Expect = 2.53e-119 Identity = 178/183 (97.27%), Postives = 181/183 (98.91%), Query Frame = 0
BLAST of Cucsat.G13212.T11 vs. ExPASy TrEMBL
Match: A0A5D3DPW6 (A_thal_3526 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006870 PE=4 SV=1) HSP 1 Score: 349 bits (896), Expect = 2.53e-119 Identity = 178/183 (97.27%), Postives = 181/183 (98.91%), Query Frame = 0
BLAST of Cucsat.G13212.T11 vs. ExPASy TrEMBL
Match: A0A1S3B764 (uncharacterized protein LOC103486898 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486898 PE=4 SV=1) HSP 1 Score: 343 bits (880), Expect = 6.65e-117 Identity = 177/183 (96.72%), Postives = 180/183 (98.36%), Query Frame = 0
BLAST of Cucsat.G13212.T11 vs. ExPASy TrEMBL
Match: A0A6J1DW65 (uncharacterized protein LOC111025014 OS=Momordica charantia OX=3673 GN=LOC111025014 PE=4 SV=1) HSP 1 Score: 310 bits (795), Expect = 5.54e-104 Identity = 162/183 (88.52%), Postives = 170/183 (92.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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