Cucsat.G12890.T1 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G12890.T1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Thioredoxin
Location	ctg1838: 6504430 .. 6505806 (-)
RNA-Seq Expression	Cucsat.G12890.T1
Synteny	Cucsat.G12890.T1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AATGTAGATGTAGACTAATATATCATAGGTATGTAATTTAGCCAAGATTGGGAGGTGCGATCGATGCTTACCTAGTTGCGTACCGCGTAGTGTAAGCCGCAAAATCTGATGCTCTTCTCATTTTGCTTTGCTTATTATACCTTCCTTGAATTTGTTCTCTCCTAACGCACTCCCATTGTTCCGATTCTTCAACATCAAAAAGTCGGAGCTCTCCCAGCTTTCTCAATTGGTTCCATTTCATATCCACCGCTAATAGGGCTTTCCAATTACCCCTTCATTTCCTTCTCTTCTTCCTATAAATGGACTCATTCACATTTTTATTACTTCAATTCAATTTCCCTGTTGGACGACGGTCTTACAGGGAAAACCAATTCCAAGTTATTACTCTCTTTGCTCTTGTAATTTAAGATTGAACATGGCGGAAAAGAGCCAAGTGATTGCGTGCCATACCGTTGAATCATGGAAGCAGCAGCTTCTCAAAGGGAAACAATTTGATAAATTGGTATTGCTTGATCCAAATCTATTGGTTTCTTCATGTGTTCTTCCTCTTCTCTTCCTCTTTTTAAACAATTTTAATTCTACAGATTGTCGTGGACTTCACCGCTGCATGGTGCGGTCCCTGCCGTGCCATTGCTCCGGTTTTTGTAGAGCTGGCTGAGAAGATGAGTAATGTCATTTTCTTGAAGGTCGACGTTGATAAATTGACTGTAAGTTGATTCAATTCAAGCTTTCTAGATGTCTGTACGAATGACTCAATCTTAGCAGCATCAATTGATAATTGTCCAAAATGTATCATGATTGAGCCATTCTGCATTAATGCCTCTAGAATGGGTGATCTCTACCCTACAAAACTATTGTATCGTTAGTTGAGTGATATTGTTAAGACTACAAACAAATAATGGAAATCTTTTGTGCAGACTGTTGCTGCGGAGTGGGGAGTGAGTGCATTACCTTGTTTCATGTTCTTGAAGAATGGGAAGATGGTGGATAGGTTTGTAGGTGCAAGAAAAGATGCATTGCGGAAGCTCGTATCACACCATGCCTAATCTAATGGGGAAACTCTATGCTGAGGAGATAACCACCACCTTTCTTTTTTCTTGGATTTCTATCAGAACCAGAAAAAGGTTTATGCAACTTTTGTGAGTTGCTATAAATTGATGCTTTTTAGTTAGCACAACTTTTATTTTTCTTGTTTAGGATTGTTTTTAAATCATTTTTACTATTTCTAGAGGCTATCAGACTTGTTGTGTAATGAATGAGCATCTATTCTTTTCTTGAATAAAAATCAGCACCTATTTACAATTTCGTAAGGTTCTTTATCAGTTTGCAGCCAAGATGATGCTAAAGTACTAATCCAAAAGAGAAGAATTTGAATAA

Coding sequence (CDS)

ATGGCGGAAAAGAGCCAAGTGATTGCGTGCCATACCGTTGAATCATGGAAGCAGCAGCTTCTCAAAGGGAAACAATTTGATAAATTGATTGTCGTGGACTTCACCGCTGCATGGTGCGGTCCCTGCCGTGCCATTGCTCCGGTTTTTGTAGAGCTGGCTGAGAAGATGAGTAATGTCATTTTCTTGAAGGTCGACGTTGATAAATTGACTACTGTTGCTGCGGAGTGGGGAGTGAGTGCATTACCTTGTTTCATGTTCTTGAAGAATGGGAAGATGGTGGATAGGTTTGTAGGTGCAAGAAAAGATGCATTGCGGAAGCTCGTATCACACCATGCCTAA

Protein sequence

MAEKSQVIACHTVESWKQQLLKGKQFDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVIFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKMVDRFVGARKDALRKLVSHHA

Homology

[Close]

BLAST of Cucsat.G12890.T1 vs. ExPASy Swiss-Prot
Match: Q43636 (Thioredoxin H-type OS=Ricinus communis OX=3988 PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 8.1e-36
Identity = 68/110 (61.82%), Postives = 85/110 (77.27%), Query Frame = 0


Query: 2   AEKSQVIACHTVESWKQQLLKGKQFDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVIF 61
           AE+ QVI CHTVE+W +QL KG     LIVVDFTA+WCGPCR IAP   ELA+K+ NV F
Sbjct: 3   AEEGQVIGCHTVEAWNEQLQKGNDTKGLIVVDFTASWCGPCRFIAPFLAELAKKLPNVTF 62

Query: 62  LKVDVDKLTTVAAEWGVSALPCFMFLKNGKMVDRFVGARKDALRKLVSHH 112
           LKVDVD+L TVA EW V ++P FMFLK GK++D+ VGA+KD L++ ++ H
Sbjct: 63  LKVDVDELKTVAHEWAVESMPTFMFLKEGKIMDKVVGAKKDELQQTIAKH 112

[Close]

BLAST of Cucsat.G12890.T1 vs. ExPASy Swiss-Prot
Match: P29448 (Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 2.4e-35
Identity = 63/110 (57.27%), Postives = 87/110 (79.09%), Query Frame = 0


Query: 2   AEKSQVIACHTVESWKQQLLKGKQFDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVIF 61
           +E+ QVIACHTVE+W +QL K  +   L+VVDFTA+WCGPCR IAP F +LA+K+ NV+F
Sbjct: 3   SEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLF 62

Query: 62  LKVDVDKLTTVAAEWGVSALPCFMFLKNGKMVDRFVGARKDALRKLVSHH 112
           LKVD D+L +VA++W + A+P FMFLK GK++D+ VGA+KD L+  ++ H
Sbjct: 63  LKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKH 112

[Close]

BLAST of Cucsat.G12890.T1 vs. ExPASy Swiss-Prot
Match: P29449 (Thioredoxin H-type 1 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 4.4e-34
Identity = 63/111 (56.76%), Postives = 85/111 (76.58%), Query Frame = 0


Query: 2   AEKSQVIACHTVESWKQQLLKGKQFDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVIF 61
           +E+ QV  CH VE W +   KG +  KL+VVDFTA+WCGPCR IAP+  ++A+KM +VIF
Sbjct: 9   SEEGQVFGCHKVEEWNEYFKKGVETKKLVVVDFTASWCGPCRFIAPILADIAKKMPHVIF 68

Query: 62  LKVDVDKLTTVAAEWGVSALPCFMFLKNGKMVDRFVGARKDALRKLVSHHA 113
           LKVDVD+L TV+AEW V A+P F+F+K+GK VDR VGA+K+ L++ +  HA
Sbjct: 69  LKVDVDELKTVSAEWSVEAMPTFVFIKDGKEVDRVVGAKKEELQQTIVKHA 119

[Close]

BLAST of Cucsat.G12890.T1 vs. ExPASy Swiss-Prot
Match: Q07090 (Thioredoxin H-type 2 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 1.7e-33
Identity = 65/111 (58.56%), Postives = 84/111 (75.68%), Query Frame = 0


Query: 1   MAEKSQVIACHTVESWKQQLLKGKQFDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI 60
           MAE+ QVI  HTV++W + L KG    KLIVVDFTA+WCGPC+ IA  + ELA+KM  V 
Sbjct: 1   MAEEGQVIGVHTVDAWNEHLQKGIDDKKLIVVDFTASWCGPCKFIASFYAELAKKMPTVT 60

Query: 61  FLKVDVDKLTTVAAEWGVSALPCFMFLKNGKMVDRFVGARKDALRKLVSHH 112
           FLKVDVD+L +VA +W V A+P FMFLK GK+VD+ VGA+KD L++ ++ H
Sbjct: 61  FLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKDELQQTIAKH 111

[Close]

BLAST of Cucsat.G12890.T1 vs. ExPASy Swiss-Prot
Match: Q96419 (Thioredoxin H-type OS=Fagopyrum esculentum OX=3617 PE=3 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 7.8e-31
Identity = 63/112 (56.25%), Postives = 79/112 (70.54%), Query Frame = 0


Query: 1   MAEKSQVIACHTVESWKQQLLKGKQFDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI 60
           MAE++QVIACHTV+ W ++  K K   KLIV+DFTA+WCGPCR I P   ELA+K  +V 
Sbjct: 1   MAEEAQVIACHTVQEWNEKFQKAKDSGKLIVIDFTASWCGPCRVITPYVSELAKKFPHVA 60

Query: 61  FLKVDVDKLTTVAAEWGVSALPCFMFLKNGKMVDRFVGARKDALRKLVSHHA 113
           F KVDVD L  VA E+ V A+P F+ LK G+ V+R VGARKD L   ++ HA
Sbjct: 61  FFKVDVDDLKDVAEEYKVEAMPSFVILKEGQEVERIVGARKDELLHKIAVHA 112

[Close]

BLAST of Cucsat.G12890.T1 vs. NCBI nr
Match: XP_004147847.1 (thioredoxin H-type [Cucumis sativus] >KGN59999.1 hypothetical protein Csa_001620 [Cucumis sativus])

HSP 1 Score: 231 bits (590), Expect = 1.07e-76
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MAEKSQVIACHTVESWKQQLLKGKQFDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI 60
           MAEKSQVIACHTVESWKQQLLKGKQFDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI
Sbjct: 1   MAEKSQVIACHTVESWKQQLLKGKQFDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI 60

Query: 61  FLKVDVDKLTTVAAEWGVSALPCFMFLKNGKMVDRFVGARKDALRKLVSHHA 112
           FLKVDVDKLTTVAAEWGVSALPCFMFLKNGKMVDRFVGARKDALRKLVSHHA
Sbjct: 61  FLKVDVDKLTTVAAEWGVSALPCFMFLKNGKMVDRFVGARKDALRKLVSHHA 112

[Close]

BLAST of Cucsat.G12890.T1 vs. NCBI nr
Match: XP_008466520.1 (PREDICTED: thioredoxin H-type-like [Cucumis melo] >KAA0063226.1 thioredoxin H-type-like [Cucumis melo var. makuwa] >TYK13476.1 thioredoxin H-type-like [Cucumis melo var. makuwa])

HSP 1 Score: 220 bits (560), Expect = 4.04e-72
Identity = 106/112 (94.64%), Postives = 108/112 (96.43%), Query Frame = 0


Query: 1   MAEKSQVIACHTVESWKQQLLKGKQFDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI 60
           MAEKSQVI CHTV+SWKQQLLKGKQ DKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI
Sbjct: 1   MAEKSQVITCHTVQSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI 60

Query: 61  FLKVDVDKLTTVAAEWGVSALPCFMFLKNGKMVDRFVGARKDALRKLVSHHA 112
           FLKVDVDKLTTVAAEWGVSALPCFMFLKNG +VDRFVGARKDALRKLV HHA
Sbjct: 61  FLKVDVDKLTTVAAEWGVSALPCFMFLKNGNVVDRFVGARKDALRKLVLHHA 112

[Close]

BLAST of Cucsat.G12890.T1 vs. NCBI nr
Match: XP_038898480.1 (thioredoxin H1-like [Benincasa hispida])

HSP 1 Score: 210 bits (534), Expect = 4.69e-68
Identity = 101/112 (90.18%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 1   MAEKSQVIACHTVESWKQQLLKGKQFDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI 60
           M +KS+VI CHTV SWKQQLLKGKQ DKLIVVDFTAAWCGPCRAIAPVF ELAEKMSNVI
Sbjct: 8   MMQKSEVITCHTVGSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFAELAEKMSNVI 67

Query: 61  FLKVDVDKLTTVAAEWGVSALPCFMFLKNGKMVDRFVGARKDALRKLVSHHA 112
           FLKVDVDKLTTVAAEWGVSALPCFMFLKNGK+V+RFVGARKDALRKLV  HA
Sbjct: 68  FLKVDVDKLTTVAAEWGVSALPCFMFLKNGKVVERFVGARKDALRKLVLQHA 119

[Close]

BLAST of Cucsat.G12890.T1 vs. NCBI nr
Match: KAG6591291.1 (hypothetical protein SDJN03_13637, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024175.1 hypothetical protein SDJN02_12989 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 200 bits (509), Expect = 2.43e-64
Identity = 97/112 (86.61%), Postives = 102/112 (91.07%), Query Frame = 0


Query: 1   MAEKSQVIACHTVESWKQQLLKGKQFDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI 60
           MAE S VI CHTV SWKQQLLKGKQ +KLIVVDFTAAWCGPCRAIAPVF ELA+KMSNVI
Sbjct: 1   MAENSGVITCHTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAIAPVFAELAKKMSNVI 60

Query: 61  FLKVDVDKLTTVAAEWGVSALPCFMFLKNGKMVDRFVGARKDALRKLVSHHA 112
           FLKVDVDKL TVAAEWGVSALPCFMFLKNGK+V RFVGARKDAL+K+V  HA
Sbjct: 61  FLKVDVDKLNTVAAEWGVSALPCFMFLKNGKVVARFVGARKDALQKIVLQHA 112

[Close]

BLAST of Cucsat.G12890.T1 vs. NCBI nr
Match: XP_022975984.1 (thioredoxin H-type-like [Cucurbita maxima] >XP_022975985.1 thioredoxin H-type-like [Cucurbita maxima])

HSP 1 Score: 197 bits (501), Expect = 4.04e-63
Identity = 95/112 (84.82%), Postives = 100/112 (89.29%), Query Frame = 0


Query: 1   MAEKSQVIACHTVESWKQQLLKGKQFDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI 60
           MAE S VI CHTV SWKQQLLKGKQ +KLIVVDFTAAWCGPCRAIAP F ELA+KMSNVI
Sbjct: 1   MAENSGVITCHTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAIAPAFAELAKKMSNVI 60

Query: 61  FLKVDVDKLTTVAAEWGVSALPCFMFLKNGKMVDRFVGARKDALRKLVSHHA 112
           FLKVDVDKL TVAAEWGV ALPCFMFLKNGK+V RFVGARKDAL+K+V  HA
Sbjct: 61  FLKVDVDKLNTVAAEWGVGALPCFMFLKNGKVVARFVGARKDALQKIVLQHA 112

[Close]

BLAST of Cucsat.G12890.T1 vs. ExPASy TrEMBL
Match: A0A0A0LGF7 (Thioredoxin OS=Cucumis sativus OX=3659 GN=Csa_3G865340 PE=3 SV=1)

HSP 1 Score: 231 bits (590), Expect = 5.18e-77
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MAEKSQVIACHTVESWKQQLLKGKQFDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI 60
           MAEKSQVIACHTVESWKQQLLKGKQFDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI
Sbjct: 1   MAEKSQVIACHTVESWKQQLLKGKQFDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI 60

Query: 61  FLKVDVDKLTTVAAEWGVSALPCFMFLKNGKMVDRFVGARKDALRKLVSHHA 112
           FLKVDVDKLTTVAAEWGVSALPCFMFLKNGKMVDRFVGARKDALRKLVSHHA
Sbjct: 61  FLKVDVDKLTTVAAEWGVSALPCFMFLKNGKMVDRFVGARKDALRKLVSHHA 112

[Close]

BLAST of Cucsat.G12890.T1 vs. ExPASy TrEMBL
Match: A0A5A7V9W3 (Thioredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold556G00080 PE=3 SV=1)

HSP 1 Score: 220 bits (560), Expect = 1.96e-72
Identity = 106/112 (94.64%), Postives = 108/112 (96.43%), Query Frame = 0


Query: 1   MAEKSQVIACHTVESWKQQLLKGKQFDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI 60
           MAEKSQVI CHTV+SWKQQLLKGKQ DKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI
Sbjct: 1   MAEKSQVITCHTVQSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI 60

Query: 61  FLKVDVDKLTTVAAEWGVSALPCFMFLKNGKMVDRFVGARKDALRKLVSHHA 112
           FLKVDVDKLTTVAAEWGVSALPCFMFLKNG +VDRFVGARKDALRKLV HHA
Sbjct: 61  FLKVDVDKLTTVAAEWGVSALPCFMFLKNGNVVDRFVGARKDALRKLVLHHA 112

[Close]

BLAST of Cucsat.G12890.T1 vs. ExPASy TrEMBL
Match: A0A1S3CSR4 (Thioredoxin OS=Cucumis melo OX=3656 GN=LOC103503910 PE=3 SV=1)

HSP 1 Score: 220 bits (560), Expect = 1.96e-72
Identity = 106/112 (94.64%), Postives = 108/112 (96.43%), Query Frame = 0


Query: 1   MAEKSQVIACHTVESWKQQLLKGKQFDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI 60
           MAEKSQVI CHTV+SWKQQLLKGKQ DKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI
Sbjct: 1   MAEKSQVITCHTVQSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI 60

Query: 61  FLKVDVDKLTTVAAEWGVSALPCFMFLKNGKMVDRFVGARKDALRKLVSHHA 112
           FLKVDVDKLTTVAAEWGVSALPCFMFLKNG +VDRFVGARKDALRKLV HHA
Sbjct: 61  FLKVDVDKLTTVAAEWGVSALPCFMFLKNGNVVDRFVGARKDALRKLVLHHA 112

[Close]

BLAST of Cucsat.G12890.T1 vs. ExPASy TrEMBL
Match: A0A6J1IM69 (thioredoxin H-type-like OS=Cucurbita maxima OX=3661 GN=LOC111476523 PE=4 SV=1)

HSP 1 Score: 197 bits (501), Expect = 1.96e-63
Identity = 95/112 (84.82%), Postives = 100/112 (89.29%), Query Frame = 0


Query: 1   MAEKSQVIACHTVESWKQQLLKGKQFDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI 60
           MAE S VI CHTV SWKQQLLKGKQ +KLIVVDFTAAWCGPCRAIAP F ELA+KMSNVI
Sbjct: 1   MAENSGVITCHTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAIAPAFAELAKKMSNVI 60

Query: 61  FLKVDVDKLTTVAAEWGVSALPCFMFLKNGKMVDRFVGARKDALRKLVSHHA 112
           FLKVDVDKL TVAAEWGV ALPCFMFLKNGK+V RFVGARKDAL+K+V  HA
Sbjct: 61  FLKVDVDKLNTVAAEWGVGALPCFMFLKNGKVVARFVGARKDALQKIVLQHA 112

[Close]

BLAST of Cucsat.G12890.T1 vs. ExPASy TrEMBL
Match: A0A6J1IZB4 (thioredoxin H1-like OS=Cucurbita maxima OX=3661 GN=LOC111481260 PE=4 SV=1)

HSP 1 Score: 196 bits (497), Expect = 7.97e-63
Identity = 93/112 (83.04%), Postives = 102/112 (91.07%), Query Frame = 0


Query: 1   MAEKSQVIACHTVESWKQQLLKGKQFDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI 60
           MA K +VIACHTV SWKQQLLKGKQ +KLIVVDFTAAWCGPCRA+APVF ELA+K+SNVI
Sbjct: 1   MAGKGEVIACHTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKISNVI 60

Query: 61  FLKVDVDKLTTVAAEWGVSALPCFMFLKNGKMVDRFVGARKDALRKLVSHHA 112
           FLKVDVD+L  VAAEWGVSALPCFMFLKNGK+VDRFVGARKD L+K+V  HA
Sbjct: 61  FLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQHA 112

The following BLAST results are available for this feature:

BLAST of Cucsat.G12890.T1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q43636	8.1e-36	61.82	Thioredoxin H-type OS=Ricinus communis OX=3988 PE=3 SV=1	[more]
P29448	2.4e-35	57.27	Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1	[more]
P29449	4.4e-34	56.76	Thioredoxin H-type 1 OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
Q07090	1.7e-33	58.56	Thioredoxin H-type 2 OS=Nicotiana tabacum OX=4097 PE=3 SV=1	[more]
Q96419	7.8e-31	56.25	Thioredoxin H-type OS=Fagopyrum esculentum OX=3617 PE=3 SV=1	[more]

BLAST of Cucsat.G12890.T1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147847.1	1.07e-76	100.00	thioredoxin H-type [Cucumis sativus] >KGN59999.1 hypothetical protein Csa_001620...	[more]
XP_008466520.1	4.04e-72	94.64	PREDICTED: thioredoxin H-type-like [Cucumis melo] >KAA0063226.1 thioredoxin H-ty...	[more]
XP_038898480.1	4.69e-68	90.18	thioredoxin H1-like [Benincasa hispida]	[more]
KAG6591291.1	2.43e-64	86.61	hypothetical protein SDJN03_13637, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022975984.1	4.04e-63	84.82	thioredoxin H-type-like [Cucurbita maxima] >XP_022975985.1 thioredoxin H-type-li...	[more]

BLAST of Cucsat.G12890.T1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LGF7	5.18e-77	100.00	Thioredoxin OS=Cucumis sativus OX=3659 GN=Csa_3G865340 PE=3 SV=1	[more]
A0A5A7V9W3	1.96e-72	94.64	Thioredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold556G00080 PE...	[more]
A0A1S3CSR4	1.96e-72	94.64	Thioredoxin OS=Cucumis melo OX=3656 GN=LOC103503910 PE=3 SV=1	[more]
A0A6J1IM69	1.96e-63	84.82	thioredoxin H-type-like OS=Cucurbita maxima OX=3661 GN=LOC111476523 PE=4 SV=1	[more]
A0A6J1IZB4	7.97e-63	83.04	thioredoxin H1-like OS=Cucurbita maxima OX=3661 GN=LOC111481260 PE=4 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 30..38 score: 51.98 coord: 38..47 score: 67.0 coord: 77..88 score: 31.9
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 1..112 e-value: 5.5E-38 score: 131.7
None	No IPR available	PANTHER	PTHR10438	THIOREDOXIN	coord: 1..112
None	No IPR available	PANTHER	PTHR10438:SF431	THIOREDOXIN	coord: 1..112
None	No IPR available	CDD	cd02947	TRX_family	coord: 14..108 e-value: 6.74305E-35 score: 113.422
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 8..108 e-value: 1.2E-28 score: 99.1
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 7..112 score: 12.932028
IPR005746	Thioredoxin	PIRSF	PIRSF000077	Thioredoxin	coord: 5..112 e-value: 5.0E-28 score: 95.2
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 31..49
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 5..110

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G12890	Cucsat.G12890	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G12890.T1.E1	Cucsat.G12890.T1.E1	exon
Cucsat.G12890.T1.E2	Cucsat.G12890.T1.E2	exon
Cucsat.G12890.T1.E3	Cucsat.G12890.T1.E3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G12890.T1.C3	Cucsat.G12890.T1.C3	CDS
Cucsat.G12890.T1.C2	Cucsat.G12890.T1.C2	CDS
Cucsat.G12890.T1.C1	Cucsat.G12890.T1.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G12890.T1	Cucsat.G12890.T1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006662	glycerol ether metabolic process
molecular_function	GO:0015035	protein-disulfide reductase activity