Cucsat.G12874.T2 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G12874.T2
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Erythronate-4-phosphate dehydrogenase family protein
Location	ctg1838: 6181717 .. 6184265 (-)
RNA-Seq Expression	Cucsat.G12874.T2
Synteny	Cucsat.G12874.T2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATATACGTGTCATGTAATCCTGCAATATTTCCAATCTGCCCATTAGCAAGAGCCTTTTTAACTTTTCCAACAAAGACAAATCTCCGTCCTTTCTTATTTGGGATTCAAAAAGATCATAACAAGAAGAGGTACCTATGAATGAATGGCCATTGTTTCCTTAGAAAACGAACCTCCTCCTCCTTCAAGCTCTTTATGTTTGTGCTTTATGAGCCACGAGCTTTGATCCATCAAGCATTTTCAGCCTTGTGCATAGACAGCGATTTGAACAAAAGCCGTTTTGTGTAAAAGATTGGATTGTTTGGGGTGTGATAGCAATGGACAGAAGAGTTCAGATTCAGCTTGTGGACGCCAAGTTTTCCAGGTACGTTTGATTTTCTGTAGAGATTTTTTCACATATGCCCCTTTCACGGGCGCCTTCACATCTATGGGAGGCTGGTTATTAGCCCTTAAGACGCCATGTAAAGGTCATCTGTACAAAAATCTTTGATGTCGTTTTTTCAACTCGAGATTTATGGGCGGCAGTAGATTTCTCCAGCTCTAACTTTCTTTTATTACTTTAACAGATTTCACTGGTTTTCCAGTTGCAACCAGCAGAACTTTTCAGATGATGCATTAATGATCACTTTAAACTAAATCAGTTCTTGAGAGGTAGCTGAGACAATCAAGCTCCTCTCCTATGAATCATGGAACATTATTATGAAACTCAAGCAAATGGAGAAGCATCTGGTCATGATTTCCAAAACTGCGGATACTCTTCTTATTCGTTATCTAACATTCAAATGTCATCACCCTCGTTTGATTTAAGAGTCTTCTACATTAGGTTCAGTAACTTCCAAGTGGACGATTTGACCCCCGAGTTTCTCACTTTGAATCAATTCCCTCTAATGCCAAATACCCATTTGGATGTTAATGGTGTTAAAAGCAGCAATTACTCTGAAGGCTTTTCTTCACTTCTCAAGAGAGACAGAGTCAACAAGAACTCGGAAGAAGCAACATTTGTGAGCACTCATACCATTAGGTTAAAGAGGGGTTTGAAGTTTGAGGTTTTCAATGGAAATTATCAAATTCTATCTGGGGAATTGTCTCATACGGGGTGCACTGGAAAATCAAAGAGCAATTCTAAGAAAAGATGGAGCATGAACTGTGAATCTGGTGCTGTTTCCGATGCTGCGTTTTTGAAGGGAAAGCTCATTCCAGGACAGGCGTTGATTAGTCCAACAATTGAGGTATACATTGCTGGTAGCTTTTCTGGAAACCCTATTGTCTTAACGAAAACTCTGCAACTCAACTTTTGGAAGAAGCACAGTCATAAACGGATGTTGGATTCAATACCAGAGCATGATACTACTGAATGCGACGAAGATTCATATCCTGTATATGATTCACAAGTAAGCTTCTTGATAGCTTCTGAATCTTTCTTCTTTCTACTCTTAATTCGTCAAGAAAATTCTGCTAGTCCATTGTAGCCTCAAAATATGTTCATCCACATGTGTTTCCTGCACTGCGACCAACTTTTTTGAGATCTAAAAGTTAATGTCTTGTTGCTTGGACGGATCTTATCCAGGACACATGAATCGATGAAAGAAGTATGGGTATAGCAAGGTGCTAAATACTGGATGGTTGGTACACATTCCATCACCATTACCTTGGCCTTTAGTTGTGCGCCCATCTTTTTAAGATTCCTATAATGATCAATCAGAACCAGGCCATATGACAAAACATGGCCTCCCCCTCTCCTAAGACATTGAGGATGGTTTAAATTGGGGTCCCCTCCACTCTCCCTAGAGTTTCCTGAGAACCCTCCTCTTTTGACTTGTACATTCGTCTTGCATCCTATCTGCTTGATACTTTCGTGCCATCTCTCAAAATGTAGCGTATAATTGAACATGATCAATGTTACTATACAAATCAAATCACTGTCAAACTAAAACTAATAGGGAGACTAGGTTGTTCTTTTCCGTTGTCCTCTCAATGTTTTGATATCTCTTCTGCCTAGACTGCTTAAGCCAGCTCTTTATAACATCTTCTACTCTATCTTTATGCAGGTATCAAAGTACAGAAATTATGGAGAAGAAAATGAGGATGACTATGGCAACATGTACTGGGGAACCGACTACATGGAGAGAGAAGATGGCGAACTATCCTGGTTCAACTCAGGTGTGAGAGTTGGAGTAGGAATTGGACTTGGTATTTGCTTGGGAATTGGTGTAGGAGTTGGCTTGCTCGTGCGTACTTACCAGGCAACTAGTCGAACCCTGAAAAGACAGCTTATGTGACACGATTTCTCCTACAATATTTCAATAGATCCACTTGTCCTTGATCTTGCTCGTGCGTACTTACCAGGCAAAAATGGTTTGTCAATAATATGCATCTCTAACAGCAGTGAAACCTTGTGAAGATAACATTGTGTCCTAGCATGTTTATTTCAAACCATGTGTATAGAAGCTCGGCTAATATCATTTCCTTATCAAATGACTGGATCACTCTTGGCTTCTTGTGAATAATCTGTTTTTGAGATGTAACAGAAATGAAGATTATTTTTTGGA

Coding sequence (CDS)

ATGGAACATTATTATGAAACTCAAGCAAATGGAGAAGCATCTGGTCATGATTTCCAAAACTGCGGATACTCTTCTTATTCGTTATCTAACATTCAAATGTCATCACCCTCGTTTGATTTAAGAGTCTTCTACATTAGGTTCAGTAACTTCCAAGTGGACGATTTGACCCCCGAGTTTCTCACTTTGAATCAATTCCCTCTAATGCCAAATACCCATTTGGATGTTAATGGTGTTAAAAGCAGCAATTACTCTGAAGGCTTTTCTTCACTTCTCAAGAGAGACAGAGTCAACAAGAACTCGGAAGAAGCAACATTTGTGAGCACTCATACCATTAGGTTAAAGAGGGGTTTGAAGTTTGAGGTTTTCAATGGAAATTATCAAATTCTATCTGGGGAATTGTCTCATACGGGGTGCACTGGAAAATCAAAGAGCAATTCTAAGAAAAGATGGAGCATGAACTGTGAATCTGGTGCTGTTTCCGATGCTGCGTTTTTGAAGGGAAAGCTCATTCCAGGACAGGCGTTGATTAGTCCAACAATTGAGGTATACATTGCTGGTAGCTTTTCTGGAAACCCTATTGTCTTAACGAAAACTCTGCAACTCAACTTTTGGAAGAAGCACAGTCATAAACGGATGTTGGATTCAATACCAGAGCATGATACTACTGAATGCGACGAAGATTCATATCCTGTATATGATTCACAAGTAAGCTTCTTGATAGCTTCTGAATCTTTCTTCTTTCTACTCTTAATTCGTCAAGAAAATTCTGCTAGTCCATTGTAG

Protein sequence

MEHYYETQANGEASGHDFQNCGYSSYSLSNIQMSSPSFDLRVFYIRFSNFQVDDLTPEFLTLNQFPLMPNTHLDVNGVKSSNYSEGFSSLLKRDRVNKNSEEATFVSTHTIRLKRGLKFEVFNGNYQILSGELSHTGCTGKSKSNSKKRWSMNCESGAVSDAAFLKGKLIPGQALISPTIEVYIAGSFSGNPIVLTKTLQLNFWKKHSHKRMLDSIPEHDTTECDEDSYPVYDSQVSFLIASESFFFLLLIRQENSASPL

Homology

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BLAST of Cucsat.G12874.T2 vs. ExPASy Swiss-Prot
Match: Q8GUH2 (Uncharacterized protein At1g01500 OS=Arabidopsis thaliana OX=3702 GN=At1g01500 PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.4e-19
Identity = 74/213 (34.74%), Postives = 116/213 (54.46%), Query Frame = 0


Query: 24  SSYSLSNIQMSSPSFDLRVFYIRFSNFQVDDLTPEFLTLNQFPLMPNTHLDVNGVKSSNY 83
           SS SLS     S   ++R+FY+R +   V+++ P+FLTL          L+VNGV+  + 
Sbjct: 33  SSISLS----QSAWLEVRLFYVRIAPCVVENV-PDFLTLRHPRRETGASLEVNGVRVPS- 92

Query: 84  SEGFSSLLKRDRVNKNSEEATFVSTHTIRLKRGLKFEVFNGNYQILSGELSHT--GCTGK 143
           S+  S  L+RDRV++ S E T+VST T+R+   + FEV++    +L G L          
Sbjct: 93  SQTASLKLRRDRVDRESSEVTYVSTETVRVTGCVDFEVYDNEDMVLCGNLDRIEGAWNNG 152

Query: 144 SKSNSKKRWSMNC----ESGAVSD---AAFLKGKLIPGQALISPTIEVYIAGSFSGNPIV 203
           + S+ K  W M+C     +G VS    + F + K      + SP++EVYIAG   G P++
Sbjct: 153 TVSDPKTGWGMDCYIAMGNGHVSGPSASVFFQPKF----GVSSPSVEVYIAGCCGGVPVI 212

Query: 204 LTKTLQLNFWKKHSHKRMLDSIPEHDTTECDED 228
           LTKT+Q +  +K +    LD+IPE +    ++D
Sbjct: 213 LTKTIQASPRRKVARHVTLDAIPEDEEVGKEQD 235

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BLAST of Cucsat.G12874.T2 vs. NCBI nr
Match: XP_004147785.1 (uncharacterized protein At1g01500 [Cucumis sativus] >KGN59953.1 hypothetical protein Csa_001764 [Cucumis sativus])

HSP 1 Score: 480 bits (1235), Expect = 2.28e-169
Identity = 236/237 (99.58%), Postives = 236/237 (99.58%), Query Frame = 0


Query: 1   MEHYYETQANGEASGHDFQNCGYSSYSLSNIQMSSPSFDLRVFYIRFSNFQVDDLTPEFL 60
           MEHYYETQANGEASGHDFQNCGYSSYSLSNIQMSSPSFDLRVFYIRFSNFQVDDLTPEFL
Sbjct: 1   MEHYYETQANGEASGHDFQNCGYSSYSLSNIQMSSPSFDLRVFYIRFSNFQVDDLTPEFL 60

Query: 61  TLNQFPLMPNTHLDVNGVKSSNYSEGFSSLLKRDRVNKNSEEATFVSTHTIRLKRGLKFE 120
           TLNQFPLMPNTHLDVNGVKSSNYSEGFSSLLKRDRVNKNSEEATFVSTHTIRLKRGLKFE
Sbjct: 61  TLNQFPLMPNTHLDVNGVKSSNYSEGFSSLLKRDRVNKNSEEATFVSTHTIRLKRGLKFE 120

Query: 121 VFNGNYQILSGELSHTGCTGKSKSNSKKRWSMNCESGAVSDAAFLKGKLIPGQALISPTI 180
           VFNGNYQILSGELSHTGCTGKSKSNSKKRWSMNCESGAVSDAAF KGKLIPGQALISPTI
Sbjct: 121 VFNGNYQILSGELSHTGCTGKSKSNSKKRWSMNCESGAVSDAAFFKGKLIPGQALISPTI 180

Query: 181 EVYIAGSFSGNPIVLTKTLQLNFWKKHSHKRMLDSIPEHDTTECDEDSYPVYDSQVS 237
           EVYIAGSFSGNPIVLTKTLQLNFWKKHSHKRMLDSIPEHDTTECDEDSYPVYDSQVS
Sbjct: 181 EVYIAGSFSGNPIVLTKTLQLNFWKKHSHKRMLDSIPEHDTTECDEDSYPVYDSQVS 237

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BLAST of Cucsat.G12874.T2 vs. NCBI nr
Match: XP_008466575.1 (PREDICTED: uncharacterized protein At1g01500-like [Cucumis melo] >KAA0041623.1 Erythronate-4-phosphate dehydrogenase family protein isoform 1 [Cucumis melo var. makuwa] >TYK19634.1 Erythronate-4-phosphate dehydrogenase family protein isoform 1 [Cucumis melo var. makuwa])

HSP 1 Score: 456 bits (1174), Expect = 4.45e-160
Identity = 224/237 (94.51%), Postives = 229/237 (96.62%), Query Frame = 0


Query: 1   MEHYYETQANGEASGHDFQNCGYSSYSLSNIQMSSPSFDLRVFYIRFSNFQVDDLTPEFL 60
           MEHYYETQANGEASGHDFQNCGYSSYSLSNI MSSPSFDLRVFYIRFSNFQVDDLTPEFL
Sbjct: 1   MEHYYETQANGEASGHDFQNCGYSSYSLSNIHMSSPSFDLRVFYIRFSNFQVDDLTPEFL 60

Query: 61  TLNQFPLMPNTHLDVNGVKSSNYSEGFSSLLKRDRVNKNSEEATFVSTHTIRLKRGLKFE 120
           TLN FPLMPNTHLDVNGV+SSNYSEGFSS+LKRDRV+KNSEEATFVSTHTIRLKRGLKFE
Sbjct: 61  TLNHFPLMPNTHLDVNGVRSSNYSEGFSSVLKRDRVHKNSEEATFVSTHTIRLKRGLKFE 120

Query: 121 VFNGNYQILSGELSHTGCTGKSKSNSKKRWSMNCESGAVSDAAFLKGKLIPGQALISPTI 180
           VFNG+YQILSGELSH GC G SKSNSKKRWSMNCESG VSDA FLKGKLIPGQALISPTI
Sbjct: 121 VFNGDYQILSGELSHKGCIGDSKSNSKKRWSMNCESGFVSDAVFLKGKLIPGQALISPTI 180

Query: 181 EVYIAGSFSGNPIVLTKTLQLNFWKKHSHKRMLDSIPEHDTTECDEDSYPVYDSQVS 237
           EVYIAGSFSGNPIVLTKTLQLNFWKKHS+KRMLDSIPEHDTTECDEDSYPVYD QVS
Sbjct: 181 EVYIAGSFSGNPIVLTKTLQLNFWKKHSYKRMLDSIPEHDTTECDEDSYPVYDPQVS 237

[Close]

BLAST of Cucsat.G12874.T2 vs. NCBI nr
Match: XP_038906162.1 (uncharacterized protein At1g01500-like [Benincasa hispida])

HSP 1 Score: 415 bits (1066), Expect = 1.23e-143
Identity = 203/237 (85.65%), Postives = 217/237 (91.56%), Query Frame = 0


Query: 1   MEHYYETQANGEASGHDFQNCGYSSYSLSNIQMSSPSFDLRVFYIRFSNFQVDDLTPEFL 60
           MEH Y T+ANGE + HDFQ CGYSSYSLSNIQMSS SFDLRVFY+R SNFQVDDLTPEFL
Sbjct: 1   MEHSYLTRANGEETDHDFQICGYSSYSLSNIQMSSLSFDLRVFYVRLSNFQVDDLTPEFL 60

Query: 61  TLNQFPLMPNTHLDVNGVKSSNYSEGFSSLLKRDRVNKNSEEATFVSTHTIRLKRGLKFE 120
           TLNQFPL+PNTHL VNGV+SSNYSEGFSSLL+RDR+NKNSEEATFVS  TIRL  GLKFE
Sbjct: 61  TLNQFPLIPNTHLGVNGVRSSNYSEGFSSLLRRDRINKNSEEATFVSIDTIRLNGGLKFE 120

Query: 121 VFNGNYQILSGELSHTGCTGKSKSNSKKRWSMNCESGAVSDAAFLKGKLIPGQALISPTI 180
           VF G+YQILSGELSH GCTG+SKSNSKKRWSMNCES  V+D  FLKGKL+PGQ LISPTI
Sbjct: 121 VFKGDYQILSGELSHKGCTGESKSNSKKRWSMNCESQVVADDVFLKGKLVPGQTLISPTI 180

Query: 181 EVYIAGSFSGNPIVLTKTLQLNFWKKHSHKRMLDSIPEHDTTECDEDSYPVYDSQVS 237
           EVY+AGSFSGNP+VLTKTLQLNFWKKHSHKRMLDSIPE+DTTEC EDSYPVYDSQVS
Sbjct: 181 EVYVAGSFSGNPVVLTKTLQLNFWKKHSHKRMLDSIPEYDTTECHEDSYPVYDSQVS 237

[Close]

BLAST of Cucsat.G12874.T2 vs. NCBI nr
Match: XP_023525038.1 (uncharacterized protein At1g01500-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 383 bits (983), Expect = 5.22e-131
Identity = 194/238 (81.51%), Postives = 210/238 (88.24%), Query Frame = 0


Query: 1   MEHYYETQANGEASGHDFQNCGYSSYSLSNIQMSSPSFDLRVFYIRFSNFQVDDLTPEFL 60
           MEH YETQ NGEA+ HDFQ CGYSSY LSNIQM SP FDLRVFY+RFSNF+VDDLTPEFL
Sbjct: 1   MEHPYETQVNGEAADHDFQICGYSSYPLSNIQMPSPLFDLRVFYVRFSNFRVDDLTPEFL 60

Query: 61  TLNQFPLMPNTHLDVNGVKSSNYSEGFSSLLKRDRVNKNSEEATFVSTHTIRLKRGLKFE 120
           TLN  PL PNTHLDVNGV++SN S GFSSLL+RDRVNKNSEEATFVST TIRL   LKFE
Sbjct: 61  TLNHIPLTPNTHLDVNGVRNSNLS-GFSSLLRRDRVNKNSEEATFVSTDTIRLMGSLKFE 120

Query: 121 VFNGNYQILSGELSHTGCTGKSKSNS-KKRWSMNCESGAVSDAAFLKGKLIPGQALISPT 180
           VFNG+YQILSGELSH  CTG S +NS KK+WSMNCESGAV+DAAFLKGKLI GQ LISP 
Sbjct: 121 VFNGDYQILSGELSHDVCTGDSNANSSKKKWSMNCESGAVADAAFLKGKLIAGQQLISPK 180

Query: 181 IEVYIAGSFSGNPIVLTKTLQLNFWKKHSHKRMLDSIPEHDTTECDEDSYPVYDSQVS 237
           IEVYIAGSFSGNP+VLTKTLQL F KKH HKRMLD+IPE+DT+EC +DSYP+YDSQVS
Sbjct: 181 IEVYIAGSFSGNPVVLTKTLQLGFRKKHGHKRMLDAIPEYDTSECHKDSYPLYDSQVS 237

[Close]

BLAST of Cucsat.G12874.T2 vs. NCBI nr
Match: KAG6608533.1 (hypothetical protein SDJN03_01875, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 383 bits (983), Expect = 5.22e-131
Identity = 193/238 (81.09%), Postives = 210/238 (88.24%), Query Frame = 0


Query: 1   MEHYYETQANGEASGHDFQNCGYSSYSLSNIQMSSPSFDLRVFYIRFSNFQVDDLTPEFL 60
           MEH YETQ NGEA+ HDFQ CGYSSY LSNIQM SP FDLRVFY+RFSNF+VDDLTPEFL
Sbjct: 1   MEHPYETQVNGEAADHDFQICGYSSYPLSNIQMPSPLFDLRVFYVRFSNFRVDDLTPEFL 60

Query: 61  TLNQFPLMPNTHLDVNGVKSSNYSEGFSSLLKRDRVNKNSEEATFVSTHTIRLKRGLKFE 120
           TLN  PL PNTHLDVNGV++SN+S GFSSLL+RDRVNKNSEEATFVST TIRL   LKFE
Sbjct: 61  TLNHIPLTPNTHLDVNGVRNSNFS-GFSSLLRRDRVNKNSEEATFVSTDTIRLMGSLKFE 120

Query: 121 VFNGNYQILSGELSHTGCTGKSKSNS-KKRWSMNCESGAVSDAAFLKGKLIPGQALISPT 180
           VFNG+YQILSGELSH  CTG S +NS KK+WSMNCESG V+DAAFLKGKLI GQ LISP 
Sbjct: 121 VFNGDYQILSGELSHDVCTGDSNTNSSKKKWSMNCESGVVADAAFLKGKLIAGQQLISPK 180

Query: 181 IEVYIAGSFSGNPIVLTKTLQLNFWKKHSHKRMLDSIPEHDTTECDEDSYPVYDSQVS 237
           IEVYIAGSFSGNP+VLTKTLQL F KKH HKRMLD+IPE+DT+EC +DSYP+YDSQVS
Sbjct: 181 IEVYIAGSFSGNPVVLTKTLQLGFRKKHGHKRMLDAIPEYDTSECHKDSYPLYDSQVS 237

[Close]

BLAST of Cucsat.G12874.T2 vs. ExPASy TrEMBL
Match: A0A0A0LDV5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G855960 PE=4 SV=1)

HSP 1 Score: 480 bits (1235), Expect = 1.10e-169
Identity = 236/237 (99.58%), Postives = 236/237 (99.58%), Query Frame = 0


Query: 1   MEHYYETQANGEASGHDFQNCGYSSYSLSNIQMSSPSFDLRVFYIRFSNFQVDDLTPEFL 60
           MEHYYETQANGEASGHDFQNCGYSSYSLSNIQMSSPSFDLRVFYIRFSNFQVDDLTPEFL
Sbjct: 1   MEHYYETQANGEASGHDFQNCGYSSYSLSNIQMSSPSFDLRVFYIRFSNFQVDDLTPEFL 60

Query: 61  TLNQFPLMPNTHLDVNGVKSSNYSEGFSSLLKRDRVNKNSEEATFVSTHTIRLKRGLKFE 120
           TLNQFPLMPNTHLDVNGVKSSNYSEGFSSLLKRDRVNKNSEEATFVSTHTIRLKRGLKFE
Sbjct: 61  TLNQFPLMPNTHLDVNGVKSSNYSEGFSSLLKRDRVNKNSEEATFVSTHTIRLKRGLKFE 120

Query: 121 VFNGNYQILSGELSHTGCTGKSKSNSKKRWSMNCESGAVSDAAFLKGKLIPGQALISPTI 180
           VFNGNYQILSGELSHTGCTGKSKSNSKKRWSMNCESGAVSDAAF KGKLIPGQALISPTI
Sbjct: 121 VFNGNYQILSGELSHTGCTGKSKSNSKKRWSMNCESGAVSDAAFFKGKLIPGQALISPTI 180

Query: 181 EVYIAGSFSGNPIVLTKTLQLNFWKKHSHKRMLDSIPEHDTTECDEDSYPVYDSQVS 237
           EVYIAGSFSGNPIVLTKTLQLNFWKKHSHKRMLDSIPEHDTTECDEDSYPVYDSQVS
Sbjct: 181 EVYIAGSFSGNPIVLTKTLQLNFWKKHSHKRMLDSIPEHDTTECDEDSYPVYDSQVS 237

[Close]

BLAST of Cucsat.G12874.T2 vs. ExPASy TrEMBL
Match: A0A5D3D7W5 (Erythronate-4-phosphate dehydrogenase family protein isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G00210 PE=4 SV=1)

HSP 1 Score: 456 bits (1174), Expect = 2.15e-160
Identity = 224/237 (94.51%), Postives = 229/237 (96.62%), Query Frame = 0


Query: 1   MEHYYETQANGEASGHDFQNCGYSSYSLSNIQMSSPSFDLRVFYIRFSNFQVDDLTPEFL 60
           MEHYYETQANGEASGHDFQNCGYSSYSLSNI MSSPSFDLRVFYIRFSNFQVDDLTPEFL
Sbjct: 1   MEHYYETQANGEASGHDFQNCGYSSYSLSNIHMSSPSFDLRVFYIRFSNFQVDDLTPEFL 60

Query: 61  TLNQFPLMPNTHLDVNGVKSSNYSEGFSSLLKRDRVNKNSEEATFVSTHTIRLKRGLKFE 120
           TLN FPLMPNTHLDVNGV+SSNYSEGFSS+LKRDRV+KNSEEATFVSTHTIRLKRGLKFE
Sbjct: 61  TLNHFPLMPNTHLDVNGVRSSNYSEGFSSVLKRDRVHKNSEEATFVSTHTIRLKRGLKFE 120

Query: 121 VFNGNYQILSGELSHTGCTGKSKSNSKKRWSMNCESGAVSDAAFLKGKLIPGQALISPTI 180
           VFNG+YQILSGELSH GC G SKSNSKKRWSMNCESG VSDA FLKGKLIPGQALISPTI
Sbjct: 121 VFNGDYQILSGELSHKGCIGDSKSNSKKRWSMNCESGFVSDAVFLKGKLIPGQALISPTI 180

Query: 181 EVYIAGSFSGNPIVLTKTLQLNFWKKHSHKRMLDSIPEHDTTECDEDSYPVYDSQVS 237
           EVYIAGSFSGNPIVLTKTLQLNFWKKHS+KRMLDSIPEHDTTECDEDSYPVYD QVS
Sbjct: 181 EVYIAGSFSGNPIVLTKTLQLNFWKKHSYKRMLDSIPEHDTTECDEDSYPVYDPQVS 237

[Close]

BLAST of Cucsat.G12874.T2 vs. ExPASy TrEMBL
Match: A0A1S3CRR3 (uncharacterized protein At1g01500-like OS=Cucumis melo OX=3656 GN=LOC103503952 PE=4 SV=1)

HSP 1 Score: 456 bits (1174), Expect = 2.15e-160
Identity = 224/237 (94.51%), Postives = 229/237 (96.62%), Query Frame = 0


Query: 1   MEHYYETQANGEASGHDFQNCGYSSYSLSNIQMSSPSFDLRVFYIRFSNFQVDDLTPEFL 60
           MEHYYETQANGEASGHDFQNCGYSSYSLSNI MSSPSFDLRVFYIRFSNFQVDDLTPEFL
Sbjct: 1   MEHYYETQANGEASGHDFQNCGYSSYSLSNIHMSSPSFDLRVFYIRFSNFQVDDLTPEFL 60

Query: 61  TLNQFPLMPNTHLDVNGVKSSNYSEGFSSLLKRDRVNKNSEEATFVSTHTIRLKRGLKFE 120
           TLN FPLMPNTHLDVNGV+SSNYSEGFSS+LKRDRV+KNSEEATFVSTHTIRLKRGLKFE
Sbjct: 61  TLNHFPLMPNTHLDVNGVRSSNYSEGFSSVLKRDRVHKNSEEATFVSTHTIRLKRGLKFE 120

Query: 121 VFNGNYQILSGELSHTGCTGKSKSNSKKRWSMNCESGAVSDAAFLKGKLIPGQALISPTI 180
           VFNG+YQILSGELSH GC G SKSNSKKRWSMNCESG VSDA FLKGKLIPGQALISPTI
Sbjct: 121 VFNGDYQILSGELSHKGCIGDSKSNSKKRWSMNCESGFVSDAVFLKGKLIPGQALISPTI 180

Query: 181 EVYIAGSFSGNPIVLTKTLQLNFWKKHSHKRMLDSIPEHDTTECDEDSYPVYDSQVS 237
           EVYIAGSFSGNPIVLTKTLQLNFWKKHS+KRMLDSIPEHDTTECDEDSYPVYD QVS
Sbjct: 181 EVYIAGSFSGNPIVLTKTLQLNFWKKHSYKRMLDSIPEHDTTECDEDSYPVYDPQVS 237

[Close]

BLAST of Cucsat.G12874.T2 vs. ExPASy TrEMBL
Match: A0A6J1FIQ0 (uncharacterized protein At1g01500-like OS=Cucurbita moschata OX=3662 GN=LOC111446093 PE=4 SV=1)

HSP 1 Score: 382 bits (982), Expect = 3.58e-131
Identity = 193/238 (81.09%), Postives = 210/238 (88.24%), Query Frame = 0


Query: 1   MEHYYETQANGEASGHDFQNCGYSSYSLSNIQMSSPSFDLRVFYIRFSNFQVDDLTPEFL 60
           MEH YETQ NGEA+ HDFQ CGYSSY LSNIQM SP FDLRVFY+RFSNF+VDDLTPEFL
Sbjct: 1   MEHPYETQLNGEAADHDFQICGYSSYPLSNIQMPSPLFDLRVFYVRFSNFRVDDLTPEFL 60

Query: 61  TLNQFPLMPNTHLDVNGVKSSNYSEGFSSLLKRDRVNKNSEEATFVSTHTIRLKRGLKFE 120
           TLN  PL PNTHLDVNGV++SN+S GFSSLL+RDRVNKNSEEATFVST TIRL   LKFE
Sbjct: 61  TLNHIPLTPNTHLDVNGVRNSNFS-GFSSLLRRDRVNKNSEEATFVSTDTIRLMGSLKFE 120

Query: 121 VFNGNYQILSGELSHTGCTGKSKSNS-KKRWSMNCESGAVSDAAFLKGKLIPGQALISPT 180
           VFNG+YQILSGELSH  CTG S +NS KK+WSMNCESG V+DAAFLKGKLI GQ LISP 
Sbjct: 121 VFNGDYQILSGELSHDVCTGDSNTNSSKKKWSMNCESGVVADAAFLKGKLIAGQQLISPK 180

Query: 181 IEVYIAGSFSGNPIVLTKTLQLNFWKKHSHKRMLDSIPEHDTTECDEDSYPVYDSQVS 237
           IEVYIAGSFSGNP+VLTKTLQL F KKH HKRMLD+IPE+DT+EC +DSYP+YDSQVS
Sbjct: 181 IEVYIAGSFSGNPVVLTKTLQLGFRKKHGHKRMLDAIPEYDTSECHKDSYPLYDSQVS 237

[Close]

BLAST of Cucsat.G12874.T2 vs. ExPASy TrEMBL
Match: A0A6J1J0K8 (uncharacterized protein At1g01500-like OS=Cucurbita maxima OX=3661 GN=LOC111480824 PE=4 SV=1)

HSP 1 Score: 371 bits (953), Expect = 9.21e-127
Identity = 188/238 (78.99%), Postives = 207/238 (86.97%), Query Frame = 0


Query: 1   MEHYYETQANGEASGHDFQNCGYSSYSLSNIQMSSPSFDLRVFYIRFSNFQVDDLTPEFL 60
           MEH YETQ NGEA+ HDFQ CGYSSY LSNI M SP FDLRVFY+RFSNF+VDDLTPEFL
Sbjct: 1   MEHPYETQVNGEAADHDFQICGYSSYPLSNITMPSPLFDLRVFYVRFSNFRVDDLTPEFL 60

Query: 61  TLNQFPLMPNTHLDVNGVKSSNYSEGFSSLLKRDRVNKNSEEATFVSTHTIRLKRGLKFE 120
           TLN  PL PNTHLDVNGV++SN+S GFSSLL+RDRVNKNSEEATFVST TIRL   LKFE
Sbjct: 61  TLNHIPLTPNTHLDVNGVRNSNFS-GFSSLLRRDRVNKNSEEATFVSTDTIRLMGSLKFE 120

Query: 121 VFNGNYQILSGELSHTGCTGKSKS-NSKKRWSMNCESGAVSDAAFLKGKLIPGQALISPT 180
           VFNG+YQIL+GELSH  CTG S + +SKK+WSMNCESG V+DAAFLKGKLI GQ LISP 
Sbjct: 121 VFNGDYQILAGELSHHVCTGDSNTISSKKKWSMNCESGVVADAAFLKGKLIAGQQLISPK 180

Query: 181 IEVYIAGSFSGNPIVLTKTLQLNFWKKHSHKRMLDSIPEHDTTECDEDSYPVYDSQVS 237
           IEVYIAGSFSGNP+VLTKTLQL   KKH  KRMLD+IPE+DT+EC +DSYP+YDSQVS
Sbjct: 181 IEVYIAGSFSGNPVVLTKTLQLGVRKKHGQKRMLDAIPEYDTSECHKDSYPLYDSQVS 237

The following BLAST results are available for this feature:

BLAST of Cucsat.G12874.T2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GUH2	1.4e-19	34.74	Uncharacterized protein At1g01500 OS=Arabidopsis thaliana OX=3702 GN=At1g01500 P...	[more]

BLAST of Cucsat.G12874.T2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147785.1	2.28e-169	99.58	uncharacterized protein At1g01500 [Cucumis sativus] >KGN59953.1 hypothetical pro...	[more]
XP_008466575.1	4.45e-160	94.51	PREDICTED: uncharacterized protein At1g01500-like [Cucumis melo] >KAA0041623.1 E...	[more]
XP_038906162.1	1.23e-143	85.65	uncharacterized protein At1g01500-like [Benincasa hispida]	[more]
XP_023525038.1	5.22e-131	81.51	uncharacterized protein At1g01500-like [Cucurbita pepo subsp. pepo]	[more]
KAG6608533.1	5.22e-131	81.09	hypothetical protein SDJN03_01875, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Cucsat.G12874.T2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LDV5	1.10e-169	99.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G855960 PE=4 SV=1	[more]
A0A5D3D7W5	2.15e-160	94.51	Erythronate-4-phosphate dehydrogenase family protein isoform 1 OS=Cucumis melo v...	[more]
A0A1S3CRR3	2.15e-160	94.51	uncharacterized protein At1g01500-like OS=Cucumis melo OX=3656 GN=LOC103503952 P...	[more]
A0A6J1FIQ0	3.58e-131	81.09	uncharacterized protein At1g01500-like OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1J0K8	9.21e-127	78.99	uncharacterized protein At1g01500-like OS=Cucurbita maxima OX=3661 GN=LOC1114808...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR42938	FORMATE DEHYDROGENASE 1	coord: 1..236
None	No IPR available	PANTHER	PTHR42938:SF17	SUBFAMILY NOT NAMED	coord: 1..236

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G12874	Cucsat.G12874	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G12874.T2.E1	Cucsat.G12874.T2.E1	exon
Cucsat.G12874.T2.E2	Cucsat.G12874.T2.E2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G12874.T2.C1	Cucsat.G12874.T2.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G12874.T2	Cucsat.G12874.T2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004617	phosphoglycerate dehydrogenase activity