Cucsat.G12742.T30 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G12742.T30
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	cyclic nucleotide gated channel 7
Location	ctg1838: 3449478 .. 3453365 (-)
RNA-Seq Expression	Cucsat.G12742.T30
Synteny	Cucsat.G12742.T30

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGCCAAATAGAACATATTTCAACTTTTCAAATGTACTGAGAAAGAAAGAAAGTAAAATACTAAAAAAAAACATTTGAATATACAATCTCACTAAAGAAAAATAAATATTAATAAAGAATCCGGGAAGAAGCTCACCGGCCATCAGCACCGTCACCGGTGCGAAGAGTGAAAATCTGAGATGATCGGAGTTTCAAACCAATCAGAGATTCAGAATTCAAACGTACGTATGTCTCCATGCTTTTTTGAGAACCCATATTCAAAGACTTCGCGAGAAGAAAGAAGAAAATGCAGAGACAAAATTTCCATTTTCTAAATATAGAAACGCTATCCCGCGAGAAAATTGGATCTCCAATGGAAGAAAAAGAGAGAGAAGATGAAGAACTAACAATTTCTTTCCACTTGATGCGACCATTTCAAACCCACCTGCCTGTTGTCGCTCTGCAGAATCGAACGGAGATTTTTTTTTTCAGGAACAGAGGTTTTGATTTGCAGTTGTTGGAAACCAGAATGATCTAATTCGAGAACACAACGGCGGAAATCGGAAGCGCCGTTGGGTCTGAACCATTTTAATTTCTCGGCGATCAACTCTCGCATCTATGTTCTCCATTGCCACAAAATGTTCGATTGTGGTGGATACAAGTCGCAGTACATCGGTGGTCACAAGGAGAAATTCGTGAGGTACGTTCTACAATTTCTGAACAGAACTAATGGATGAGAGGTTTTACTTTTCATGAACTTTTACAGGTTGGATGATTTGGATTCGAATTTGTCAGTGCCCTCGGGAACAAGCAAAATGAAGAAATGCAGATTCAATCTAGAAGGTCTCCCATTGCCATTCATCAGCAGATCGAAGCCACAAAACGCGTCGAAATCTTTCCGAAGGGGAGTTCAAAGAAGCTCCGACGGAATCATAACTCTAGGTCGATCGCTCCGCTCCGGCGTGTCCAAAGTCATCTTCCCGGAGGATCTTAAAGTATCGGAACAGAAAATCTTCGATCCACAGGACAAATCGCTCCTCTTCTGGAACAAACTATTCGTGTTGTGCTGTATCCTCGCCGTGTCTGTCGATCCGTTGTTCTTCTACCTCCCTGTGTTCAACCATGCCTCTTACTGCCTCGGAATGGACACTCAGCTCGCCGTCACGACCACCACCGTGCGTACGGCTATCGATGTTTTTTACTTGATTCGGATGGGGTTTCAGTTCCGAACGGCTTACATTGCGCCGTCGTCTAGGGTGTTTGGTCGGGGGGAGCTTGTGATTGATCCGACGGAGATAGCCCAGCGGTATCTTCAGCGCTACTTTATAGCTGATTTTCTATCTGTTCTTCCTCTTCCTCAGGTTGGTGTGTTTCATAGAACCCATAGCTAATTCAATATTAAAATTTTGATTTCATTTTTGTTTGATGAGTTTGTGTGTGTGTGTGTGTGATGTAGTTAGTGGTGTGGAGATTTCTTCACAGATCAAAAGGATCAGAAGTTTTGGCAACAAAACAAGCATTGTTAAACATAGTGTTTCTTCAGTATATTCCAAGATTTATTAGATTTATACCTTTGAACATAGAGCTTAAGAAGACAGCAGGTGTTTTTGCTGAAAGTGCTTGGGCTGGTGCTGCTTACTATCTCCTCTTATACATGCTTGCCAGTCATGTAAGCAACCCCTCTTCCACTTCCTCAATCCTCAATCCTCAAATCCCTTTCATAATTTTGTAAATTAATTAAAATGCAGATTGCAGGAGCATTCTGGTACTTGCTTGCAGTGGAGAGGAACGATGCATGTTGGCGGCAAGCATGCAAAAGCAGTGGAAAGTGCAACATTAACTATTTGTATTGTGGGAATAAGCACATGGCTGGGTACAAAGCTTGGAGAAATATAAGCGTTGATGTTCTCACCAAGAAATGCACTGCCTTGGGAGATAATTTGCCTTTCAACTATGGCATTTACACTCAGGCCATTTCCTCTGGCATTGTTCAATCCAGGACTTTCTTCTCCAAGTTCTGCTATTGCTTGTGGTGGGGCTTGCAAAATTTAAGGTCTCTCCCTTTCTTCACTTTACTTTTAAGTTTGTAATATACCATTGGTGATTTAACTGTCTAGATTGGAGGTCGTGTATTTAAACCTTACCCAATCTCATTTCTTTCTCAATTAACATTCATTTCTACATATTGGATCTTTTATTTATTTCAAGTAAATAAATGAGACCGAACTTAATATCATGTTAATTCATTTATCAATTTTGTTTTACGAATCTTTTTTTGTTTATCGAAGACTTTAGAGGGTTTGGAGCAAATAGTTGGTTAGTTTGTGTGTGAGGTGTAGAATGTGTAGACTATTTTAGTTTGATAAGAAAATGATAAACTCTGTCCTAAAGAAAAAAAATGATAGTTTTGAAATAACTTAGATAGTTACTGTTTGAAAATTACAAAATAGTATTTATTAACAGTGTTAGGATACTCTTTGTATCAAAGGTACAAGGACGTATATAACACATTTTGAAAGATTGGTTTGTGTTTTGGATATTGAATGTTTGATTCTTCCACAGTACACTTGGTCAAGGGCTGCTCACTAGTACTTATCCTGGGGAGGTTATCTTTTCTATTCTAATTGCAATTTCTGGGCTCCTCCTTTTTGCACTCTTGATTGGAAACATGCAAGTGAGTATTTTTTCTTCTTCTTCCTTCGGCATCTTTTCCATGGTCAACTCCTACGCTTGCATGGTTTCAAGGATGAACTAAAAAGTATTTTTAAGTGACTAAATTACTTTTCCTATGCTGTTACGTTTTTCTCAGACGTATCTTCAATCTCTAACAGTCCGACTTGAAGAGATGCGCATCAAGAGGAGAGACTCTGAGCAATGGATGCACCATCGACTGCTTCCACCAGACTTGAGAGAAAAAGTTAGGCGCTACGATCAGTACAAATGGCTTGAAACCAGAGGTGTTGATGAAGAGAGCTTGGTTCAGAGTCTGCCTAAAGATCTTAGGAGAGACATTAAACGACATCTCTGTCTCAATTTGGTTAGAAGGGTATGTATTCATTTCATCACTTGTTATGTCTTTTTTTTATTTCTTTAGCATGTCTTAGCGGACCTATGTGCTTTGAGTGGTCAAATTATTGTTGGGTTGGCTTTGCACACAGGTCCCATTGTTTGCAAACATGGATGAGCGTCTCCTAGACGCAATATGCGAGAGGCTAAAACCAACACTATACACCGAGAACACATACATAGTACGAGAAGGCGACCCAGTCGACGAAATGCTCTTCATAATCCGCGGCCGTCTAGAGAGCGTCACCACCGACGGCGGCCGTAGCGGATTCTACAACCGTGGCATATTAAAAGAAGGCGATTTCTGTGGCGAAGAGCTTTTAACCTGGGCTCTCGACCCCAAATCCGGCTCCAACCTCCCTTCCTCCACTCGCACCGTCCATGCCCTAACCGAGGTCGAAGCCTTCGCCTTAGAGGCCGAGGAACTCAAATTCGTAGCCAGTCAGTTCCGTCGCCTCCACAGTCGCCAAGTTCAACACACCTTTAGATTCTACTCCCAGCAGTGGCGAACTTGGGCGTCGTGTTTCATACAGGCAGCGTGGCGGCGGTATTTAAAACGGAAAATCGCGGAGCTGCGACGGAAGGAGGAGGAGGAAGAGGTTGCGGCGGCGTATAGTACGTCGAGACTTGGGGCTACGATTTTGGCGTCGAGATTTGCGGCCAATGCGCTTAGAGGACATCGAATGAGAAACGTGAGTGGGAAGAGCTTGATTAGCTTGCAGAAGCCGAAGGAACCTGATTTTTCTGTTTACAAAGGAGAGTAAAAAGAATAAATGAATGGTTCTTTTGGAAATTTTATTTTGCCTCTAGGTTTCAAATTTAATTATGTTATATATATATA

Coding sequence (CDS)

ATGGATGAGCGTCTCCTAGACGCAATATGCGAGAGGCTAAAACCAACACTATACACCGAGAACACATACATAGTACGAGAAGGCGACCCAGTCGACGAAATGCTCTTCATAATCCGCGGCCGTCTAGAGAGCGTCACCACCGACGGCGGCCGTAGCGGATTCTACAACCGTGGCATATTAAAAGAAGGCGATTTCTGTGGCGAAGAGCTTTTAACCTGGGCTCTCGACCCCAAATCCGGCTCCAACCTCCCTTCCTCCACTCGCACCGTCCATGCCCTAACCGAGGTCGAAGCCTTCGCCTTAGAGGCCGAGGAACTCAAATTCGTAGCCAGTCAGTTCCGTCGCCTCCACAGTCGCCAAGTTCAACACACCTTTAGATTCTACTCCCAGCAGTGGCGAACTTGGGCGTCGTGTTTCATACAGGCAGCGTGGCGGCGGTATTTAAAACGGAAAATCGCGGAGCTGCGACGGAAGGAGGAGGAGGAAGAGGTTGCGGCGGCGTATAGTACGTCGAGACTTGGGGCTACGATTTTGGCGTCGAGATTTGCGGCCAATGCGCTTAGAGGACATCGAATGAGAAACGTGAGTGGGAAGAGCTTGATTAGCTTGCAGAAGCCGAAGGAACCTGATTTTTCTGTTTACAAAGGAGAGTAA

Protein sequence

MDERLLDAICERLKPTLYTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFYNRGILKEGDFCGEELLTWALDPKSGSNLPSSTRTVHALTEVEAFALEAEELKFVASQFRRLHSRQVQHTFRFYSQQWRTWASCFIQAAWRRYLKRKIAELRRKEEEEEVAAAYSTSRLGATILASRFAANALRGHRMRNVSGKSLISLQKPKEPDFSVYKGE

Homology

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BLAST of Cucsat.G12742.T30 vs. ExPASy Swiss-Prot
Match: Q9S9N5 (Putative cyclic nucleotide-gated ion channel 7 OS=Arabidopsis thaliana OX=3702 GN=CNGC7 PE=3 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 5.7e-94
Identity = 179/230 (77.83%), Postives = 198/230 (86.09%), Query Frame = 0


Query: 1   MDERLLDAICERLKPTLYTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFYNRGIL 60
           MDERLLDAICERLKP+L+TE+TYIVREGDPV+EM+FIIRGRLESVTTDGGRSGF+NRG+L
Sbjct: 506 MDERLLDAICERLKPSLFTESTYIVREGDPVNEMMFIIRGRLESVTTDGGRSGFFNRGLL 565

Query: 61  KEGDFCGEELLTWALDPKSGSNLPSSTRTVHALTEVEAFALEAEELKFVASQFRRLHSRQ 120
           KEGDFCGEELLTWALDPK+GSNLPSSTRTV ALTEVEAFALEAEELKFVASQFRRLHSRQ
Sbjct: 566 KEGDFCGEELLTWALDPKAGSNLPSSTRTVKALTEVEAFALEAEELKFVASQFRRLHSRQ 625

Query: 121 VQHTFRFYSQQWRTWASCFIQAAWRRYLKRKIAELRRKEEEEE----------------- 180
           VQ TFRFYSQQWRTWASCFIQAAWRRY +RK AELRR EE+EE                 
Sbjct: 626 VQQTFRFYSQQWRTWASCFIQAAWRRYSRRKNAELRRIEEKEEELGYEDEYDDESDKRPM 685

Query: 181 -VAAAYSTSRLGATILASRFAANALRGHRMR-NVSGKSLISLQKPKEPDF 212
            +  + S+SRL +TI ASRFAANAL+GHR+R + S K+LI+LQKP EPDF
Sbjct: 686 VITRSESSSRLRSTIFASRFAANALKGHRLRSSESSKTLINLQKPPEPDF 735

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BLAST of Cucsat.G12742.T30 vs. ExPASy Swiss-Prot
Match: Q9FXH6 (Putative cyclic nucleotide-gated ion channel 8 OS=Arabidopsis thaliana OX=3702 GN=CNGC8 PE=3 SV=2)

HSP 1 Score: 345.1 bits (884), Expect = 5.7e-94
Identity = 179/233 (76.82%), Postives = 198/233 (84.98%), Query Frame = 0


Query: 1   MDERLLDAICERLKPTLYTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFYNRGIL 60
           MDERLLDAICERLKP+LYTE+TYIVREGDPV+EMLFIIRGRLESVTTDGGRSGF+NRG+L
Sbjct: 512 MDERLLDAICERLKPSLYTESTYIVREGDPVNEMLFIIRGRLESVTTDGGRSGFFNRGLL 571

Query: 61  KEGDFCGEELLTWALDPKSGSNLPSSTRTVHALTEVEAFALEAEELKFVASQFRRLHSRQ 120
           KEGDFCGEELLTWALDPK+GSNLPSSTRTV ALTEVEAFALEAEELKFVASQFRRLHSRQ
Sbjct: 572 KEGDFCGEELLTWALDPKAGSNLPSSTRTVKALTEVEAFALEAEELKFVASQFRRLHSRQ 631

Query: 121 VQHTFRFYSQQWRTWASCFIQAAWRRYLKRKIAELRRKEEEEEV---------------- 180
           VQ TFRFYSQQWRTWA+CFIQAAWRR+L+RKIAELRRKEEEEE                 
Sbjct: 632 VQQTFRFYSQQWRTWAACFIQAAWRRHLRRKIAELRRKEEEEEEMDYEDDEYYDDNMGGM 691

Query: 181 -----AAAYSTSRLGATILASRFAANALRGHRMR-NVSGKSLISLQKPKEPDF 212
                ++  S+S L +T+ ASRFAANAL+GH++R   S KSL++L KP EPDF
Sbjct: 692 VTRSDSSVGSSSTLRSTVFASRFAANALKGHKLRVTESSKSLMNLTKPSEPDF 744

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BLAST of Cucsat.G12742.T30 vs. ExPASy Swiss-Prot
Match: O82226 (Probable cyclic nucleotide-gated ion channel 6 OS=Arabidopsis thaliana OX=3702 GN=CNGC6 PE=1 SV=2)

HSP 1 Score: 328.6 bits (841), Expect = 5.5e-89
Identity = 174/226 (76.99%), Postives = 187/226 (82.74%), Query Frame = 0


Query: 1   MDERLLDAICERLKPTLYTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFYNRGIL 60
           MDERLLDAICERLKP L+TE +Y+VREGDPV+EMLFIIRGRLESVTTDGGRSGFYNR +L
Sbjct: 518 MDERLLDAICERLKPCLFTEKSYLVREGDPVNEMLFIIRGRLESVTTDGGRSGFYNRSLL 577

Query: 61  KEGDFCGEELLTWALDPKSGSNLPSSTRTVHALTEVEAFALEAEELKFVASQFRRLHSRQ 120
           KEGDFCG+ELLTWALDPKSGSNLPSSTRTV ALTEVEAFAL A+ELKFVASQFRRLHSRQ
Sbjct: 578 KEGDFCGDELLTWALDPKSGSNLPSSTRTVKALTEVEAFALIADELKFVASQFRRLHSRQ 637

Query: 121 VQHTFRFYSQQWRTWASCFIQAAWRRYLKRKIAELRRKEEEEEVAAAYSTSRLG------ 180
           VQHTFRFYSQQWRTWA+CF+QAAWRRY+KRK  E  RKEEEEE AAA S    G      
Sbjct: 638 VQHTFRFYSQQWRTWAACFMQAAWRRYIKRKKLEQLRKEEEEEEAAAASVIAGGSPYSIR 697

Query: 181 ATILASRFAANALRG-HRMRNV-------SGKSLISLQKPKEPDFS 213
           AT LAS+FAANALR  H+ R         S K L+  QKP EPDFS
Sbjct: 698 ATFLASKFAANALRSVHKNRTAKSTLLLSSTKELVKFQKPPEPDFS 743

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BLAST of Cucsat.G12742.T30 vs. ExPASy Swiss-Prot
Match: Q9M0A4 (Putative cyclic nucleotide-gated ion channel 9 OS=Arabidopsis thaliana OX=3702 GN=CNGC9 PE=3 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 1.1e-86
Identity = 167/215 (77.67%), Postives = 181/215 (84.19%), Query Frame = 0


Query: 1   MDERLLDAICERLKPTLYTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFYNRGIL 60
           MDERLLDAICERLKP LYTE++Y+VREGDPV+EMLFIIRGRLESVTTDGGRSGF+NR +L
Sbjct: 517 MDERLLDAICERLKPCLYTESSYLVREGDPVNEMLFIIRGRLESVTTDGGRSGFFNRSLL 576

Query: 61  KEGDFCGEELLTWALDPKSGSNLPSSTRTVHALTEVEAFALEAEELKFVASQFRRLHSRQ 120
           KEGDFCGEELLTWALDPKSGSNLPSSTRT  ALTEVEAFAL A+ELKFVASQFRRLHSRQ
Sbjct: 577 KEGDFCGEELLTWALDPKSGSNLPSSTRTAKALTEVEAFALIADELKFVASQFRRLHSRQ 636

Query: 121 VQHTFRFYSQQWRTWASCFIQAAWRRYLKRKIAELRRKEEEEEVAAAYSTSRLGATILAS 180
           VQHTFRFYSQQWRTWA+ FIQAAWRRY+K+K  E  RKEEEE      S + + AT LAS
Sbjct: 637 VQHTFRFYSQQWRTWAAIFIQAAWRRYVKKKKLEQLRKEEEE---GEGSVTSIRATFLAS 696

Query: 181 RFAANALRGHRMRNVSGKSLISL---QKPKEPDFS 213
           +FAANALR      +  KS I L   QKP EPDFS
Sbjct: 697 KFAANALRKVHKNRIEAKSTIELVKYQKPSEPDFS 728

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BLAST of Cucsat.G12742.T30 vs. ExPASy Swiss-Prot
Match: Q8RWS9 (Probable cyclic nucleotide-gated ion channel 5 OS=Arabidopsis thaliana OX=3702 GN=CNGC5 PE=2 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 7.4e-86
Identity = 165/219 (75.34%), Postives = 183/219 (83.56%), Query Frame = 0


Query: 1   MDERLLDAICERLKPTLYTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFYNRGIL 60
           MD++LLDAIC RLKP L+TE+TY+VREGDPVDEMLFIIRGRLESVTTDGGRSGF+NR +L
Sbjct: 502 MDDKLLDAICMRLKPCLFTESTYLVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRSLL 561

Query: 61  KEGDFCGEELLTWALDPKSGSNLPSSTRTVHALTEVEAFALEAEELKFVASQFRRLHSRQ 120
           KEG+FCGEELLTWALDPKSG NLPSSTRTV ALTEVEAFAL +EELKFVASQFRRLHSRQ
Sbjct: 562 KEGEFCGEELLTWALDPKSGVNLPSSTRTVKALTEVEAFALTSEELKFVASQFRRLHSRQ 621

Query: 121 VQHTFRFYSQQWRTWASCFIQAAWRRYLKRKIAELRRKEEEEEVAAAYSTS------RLG 180
           VQHTFRFYS QWRTWA+CFIQAAWRRY KRK     + EE E  AAA S+S       +G
Sbjct: 622 VQHTFRFYSHQWRTWAACFIQAAWRRYCKRK-----KMEEAEAEAAAVSSSTAGPSYSIG 681

Query: 181 ATILASRFAANALRG-HRMRNVSGKSLISLQKPKEPDFS 213
           A  LA++FAANALR  HR RN   + L+ LQKP EPDF+
Sbjct: 682 AAFLATKFAANALRTIHRNRNTKIRDLVKLQKPPEPDFT 715

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BLAST of Cucsat.G12742.T30 vs. NCBI nr
Match: XP_004147453.1 (putative cyclic nucleotide-gated ion channel 8 [Cucumis sativus] >KAE8651236.1 hypothetical protein Csa_001607 [Cucumis sativus])

HSP 1 Score: 429 bits (1102), Expect = 5.36e-144
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MDERLLDAICERLKPTLYTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFYNRGIL 60
           MDERLLDAICERLKPTLYTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFYNRGIL
Sbjct: 515 MDERLLDAICERLKPTLYTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFYNRGIL 574

Query: 61  KEGDFCGEELLTWALDPKSGSNLPSSTRTVHALTEVEAFALEAEELKFVASQFRRLHSRQ 120
           KEGDFCGEELLTWALDPKSGSNLPSSTRTVHALTEVEAFALEAEELKFVASQFRRLHSRQ
Sbjct: 575 KEGDFCGEELLTWALDPKSGSNLPSSTRTVHALTEVEAFALEAEELKFVASQFRRLHSRQ 634

Query: 121 VQHTFRFYSQQWRTWASCFIQAAWRRYLKRKIAELRRKEEEEEVAAAYSTSRLGATILAS 180
           VQHTFRFYSQQWRTWASCFIQAAWRRYLKRKIAELRRKEEEEEVAAAYSTSRLGATILAS
Sbjct: 635 VQHTFRFYSQQWRTWASCFIQAAWRRYLKRKIAELRRKEEEEEVAAAYSTSRLGATILAS 694

Query: 181 RFAANALRGHRMRNVSGKSLISLQKPKEPDFSVYKGE 217
           RFAANALRGHRMRNVSGKSLISLQKPKEPDFSVYKGE
Sbjct: 695 RFAANALRGHRMRNVSGKSLISLQKPKEPDFSVYKGE 731

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BLAST of Cucsat.G12742.T30 vs. NCBI nr
Match: XP_008443457.1 (PREDICTED: putative cyclic nucleotide-gated ion channel 8 isoform X2 [Cucumis melo])

HSP 1 Score: 417 bits (1072), Expect = 6.90e-140
Identity = 213/221 (96.38%), Postives = 216/221 (97.74%), Query Frame = 0


Query: 1   MDERLLDAICERLKPTLYTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFYNRGIL 60
           MDERLLDAICERLKPTLYTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFYNRGIL
Sbjct: 478 MDERLLDAICERLKPTLYTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFYNRGIL 537

Query: 61  KEGDFCGEELLTWALDPKSGSNLPSSTRTVHALTEVEAFALEAEELKFVASQFRRLHSRQ 120
           KEGDFCGEELLTWALDPKSGSNLPSSTRTVHALTEVEAFALEAEELKFVASQFRRLHSRQ
Sbjct: 538 KEGDFCGEELLTWALDPKSGSNLPSSTRTVHALTEVEAFALEAEELKFVASQFRRLHSRQ 597

Query: 121 VQHTFRFYSQQWRTWASCFIQAAWRRYLKRKIAELRRKEEEEE----VAAAYSTSRLGAT 180
           VQHTFRFYSQQWRTWASCFIQAAWRRYLKRKIAELRRKEEEEE    V+AAYST+RLGAT
Sbjct: 598 VQHTFRFYSQQWRTWASCFIQAAWRRYLKRKIAELRRKEEEEEDAAAVSAAYSTTRLGAT 657

Query: 181 ILASRFAANALRGHRMRNVSGKSLISLQKPKEPDFSVYKGE 217
           ILASRFAANALRGHRMRNVSGKSLISLQKP EPDFSVYKG+
Sbjct: 658 ILASRFAANALRGHRMRNVSGKSLISLQKPAEPDFSVYKGD 698

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BLAST of Cucsat.G12742.T30 vs. NCBI nr
Match: KAA0053717.1 (putative cyclic nucleotide-gated ion channel 8 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 417 bits (1072), Expect = 1.96e-139
Identity = 213/221 (96.38%), Postives = 216/221 (97.74%), Query Frame = 0


Query: 1   MDERLLDAICERLKPTLYTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFYNRGIL 60
           MDERLLDAICERLKPTLYTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFYNRGIL
Sbjct: 515 MDERLLDAICERLKPTLYTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFYNRGIL 574

Query: 61  KEGDFCGEELLTWALDPKSGSNLPSSTRTVHALTEVEAFALEAEELKFVASQFRRLHSRQ 120
           KEGDFCGEELLTWALDPKSGSNLPSSTRTVHALTEVEAFALEAEELKFVASQFRRLHSRQ
Sbjct: 575 KEGDFCGEELLTWALDPKSGSNLPSSTRTVHALTEVEAFALEAEELKFVASQFRRLHSRQ 634

Query: 121 VQHTFRFYSQQWRTWASCFIQAAWRRYLKRKIAELRRKEEEEE----VAAAYSTSRLGAT 180
           VQHTFRFYSQQWRTWASCFIQAAWRRYLKRKIAELRRKEEEEE    V+AAYST+RLGAT
Sbjct: 635 VQHTFRFYSQQWRTWASCFIQAAWRRYLKRKIAELRRKEEEEEDAAAVSAAYSTTRLGAT 694

Query: 181 ILASRFAANALRGHRMRNVSGKSLISLQKPKEPDFSVYKGE 217
           ILASRFAANALRGHRMRNVSGKSLISLQKP EPDFSVYKG+
Sbjct: 695 ILASRFAANALRGHRMRNVSGKSLISLQKPAEPDFSVYKGD 735

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BLAST of Cucsat.G12742.T30 vs. NCBI nr
Match: XP_008443455.1 (PREDICTED: putative cyclic nucleotide-gated ion channel 8 isoform X1 [Cucumis melo] >TYK17741.1 putative cyclic nucleotide-gated ion channel 8 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 417 bits (1072), Expect = 1.96e-139
Identity = 213/221 (96.38%), Postives = 216/221 (97.74%), Query Frame = 0


Query: 1   MDERLLDAICERLKPTLYTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFYNRGIL 60
           MDERLLDAICERLKPTLYTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFYNRGIL
Sbjct: 515 MDERLLDAICERLKPTLYTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFYNRGIL 574

Query: 61  KEGDFCGEELLTWALDPKSGSNLPSSTRTVHALTEVEAFALEAEELKFVASQFRRLHSRQ 120
           KEGDFCGEELLTWALDPKSGSNLPSSTRTVHALTEVEAFALEAEELKFVASQFRRLHSRQ
Sbjct: 575 KEGDFCGEELLTWALDPKSGSNLPSSTRTVHALTEVEAFALEAEELKFVASQFRRLHSRQ 634

Query: 121 VQHTFRFYSQQWRTWASCFIQAAWRRYLKRKIAELRRKEEEEE----VAAAYSTSRLGAT 180
           VQHTFRFYSQQWRTWASCFIQAAWRRYLKRKIAELRRKEEEEE    V+AAYST+RLGAT
Sbjct: 635 VQHTFRFYSQQWRTWASCFIQAAWRRYLKRKIAELRRKEEEEEDAAAVSAAYSTTRLGAT 694

Query: 181 ILASRFAANALRGHRMRNVSGKSLISLQKPKEPDFSVYKGE 217
           ILASRFAANALRGHRMRNVSGKSLISLQKP EPDFSVYKG+
Sbjct: 695 ILASRFAANALRGHRMRNVSGKSLISLQKPAEPDFSVYKGD 735

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BLAST of Cucsat.G12742.T30 vs. NCBI nr
Match: XP_038905866.1 (putative cyclic nucleotide-gated ion channel 8 isoform X2 [Benincasa hispida])

HSP 1 Score: 413 bits (1061), Expect = 3.82e-138
Identity = 209/221 (94.57%), Postives = 216/221 (97.74%), Query Frame = 0


Query: 1   MDERLLDAICERLKPTLYTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFYNRGIL 60
           MDERLLDAICERLKPTLYTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFYNRG+L
Sbjct: 485 MDERLLDAICERLKPTLYTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFYNRGVL 544

Query: 61  KEGDFCGEELLTWALDPKSGSNLPSSTRTVHALTEVEAFALEAEELKFVASQFRRLHSRQ 120
           KEGDFCGEELLTWALDPKSGSNLPSSTRTVHALTEVEAFALEAEELKFVASQFRRLHSRQ
Sbjct: 545 KEGDFCGEELLTWALDPKSGSNLPSSTRTVHALTEVEAFALEAEELKFVASQFRRLHSRQ 604

Query: 121 VQHTFRFYSQQWRTWASCFIQAAWRRYLKRKIAELRRKEEEEE----VAAAYSTSRLGAT 180
           VQHTFRFYSQQWRTWASCFIQAAWRRYLKRKIAELRRKEEEEE    VAAA++TSRLGAT
Sbjct: 605 VQHTFRFYSQQWRTWASCFIQAAWRRYLKRKIAELRRKEEEEEDAAAVAAAFNTSRLGAT 664

Query: 181 ILASRFAANALRGHRMRNVSGKSLISLQKPKEPDFSVYKGE 217
           ILASRFAANALRGHR+RN+SG+SLI+LQKP EPDFSVYKGE
Sbjct: 665 ILASRFAANALRGHRLRNMSGRSLINLQKPAEPDFSVYKGE 705

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BLAST of Cucsat.G12742.T30 vs. ExPASy TrEMBL
Match: A0A0A0LFD3 (Cyclic nucleotide-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G829040 PE=3 SV=1)

HSP 1 Score: 429 bits (1102), Expect = 8.96e-145
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MDERLLDAICERLKPTLYTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFYNRGIL 60
           MDERLLDAICERLKPTLYTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFYNRGIL
Sbjct: 478 MDERLLDAICERLKPTLYTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFYNRGIL 537

Query: 61  KEGDFCGEELLTWALDPKSGSNLPSSTRTVHALTEVEAFALEAEELKFVASQFRRLHSRQ 120
           KEGDFCGEELLTWALDPKSGSNLPSSTRTVHALTEVEAFALEAEELKFVASQFRRLHSRQ
Sbjct: 538 KEGDFCGEELLTWALDPKSGSNLPSSTRTVHALTEVEAFALEAEELKFVASQFRRLHSRQ 597

Query: 121 VQHTFRFYSQQWRTWASCFIQAAWRRYLKRKIAELRRKEEEEEVAAAYSTSRLGATILAS 180
           VQHTFRFYSQQWRTWASCFIQAAWRRYLKRKIAELRRKEEEEEVAAAYSTSRLGATILAS
Sbjct: 598 VQHTFRFYSQQWRTWASCFIQAAWRRYLKRKIAELRRKEEEEEVAAAYSTSRLGATILAS 657

Query: 181 RFAANALRGHRMRNVSGKSLISLQKPKEPDFSVYKGE 217
           RFAANALRGHRMRNVSGKSLISLQKPKEPDFSVYKGE
Sbjct: 658 RFAANALRGHRMRNVSGKSLISLQKPKEPDFSVYKGE 694

[Close]

BLAST of Cucsat.G12742.T30 vs. ExPASy TrEMBL
Match: A0A1S3B824 (putative cyclic nucleotide-gated ion channel 8 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487043 PE=3 SV=1)

HSP 1 Score: 417 bits (1072), Expect = 3.34e-140
Identity = 213/221 (96.38%), Postives = 216/221 (97.74%), Query Frame = 0


Query: 1   MDERLLDAICERLKPTLYTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFYNRGIL 60
           MDERLLDAICERLKPTLYTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFYNRGIL
Sbjct: 478 MDERLLDAICERLKPTLYTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFYNRGIL 537

Query: 61  KEGDFCGEELLTWALDPKSGSNLPSSTRTVHALTEVEAFALEAEELKFVASQFRRLHSRQ 120
           KEGDFCGEELLTWALDPKSGSNLPSSTRTVHALTEVEAFALEAEELKFVASQFRRLHSRQ
Sbjct: 538 KEGDFCGEELLTWALDPKSGSNLPSSTRTVHALTEVEAFALEAEELKFVASQFRRLHSRQ 597

Query: 121 VQHTFRFYSQQWRTWASCFIQAAWRRYLKRKIAELRRKEEEEE----VAAAYSTSRLGAT 180
           VQHTFRFYSQQWRTWASCFIQAAWRRYLKRKIAELRRKEEEEE    V+AAYST+RLGAT
Sbjct: 598 VQHTFRFYSQQWRTWASCFIQAAWRRYLKRKIAELRRKEEEEEDAAAVSAAYSTTRLGAT 657

Query: 181 ILASRFAANALRGHRMRNVSGKSLISLQKPKEPDFSVYKGE 217
           ILASRFAANALRGHRMRNVSGKSLISLQKP EPDFSVYKG+
Sbjct: 658 ILASRFAANALRGHRMRNVSGKSLISLQKPAEPDFSVYKGD 698

[Close]

BLAST of Cucsat.G12742.T30 vs. ExPASy TrEMBL
Match: A0A5D3D0I2 (Putative cyclic nucleotide-gated ion channel 8 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1804G00120 PE=3 SV=1)

HSP 1 Score: 417 bits (1072), Expect = 9.50e-140
Identity = 213/221 (96.38%), Postives = 216/221 (97.74%), Query Frame = 0


Query: 1   MDERLLDAICERLKPTLYTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFYNRGIL 60
           MDERLLDAICERLKPTLYTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFYNRGIL
Sbjct: 515 MDERLLDAICERLKPTLYTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFYNRGIL 574

Query: 61  KEGDFCGEELLTWALDPKSGSNLPSSTRTVHALTEVEAFALEAEELKFVASQFRRLHSRQ 120
           KEGDFCGEELLTWALDPKSGSNLPSSTRTVHALTEVEAFALEAEELKFVASQFRRLHSRQ
Sbjct: 575 KEGDFCGEELLTWALDPKSGSNLPSSTRTVHALTEVEAFALEAEELKFVASQFRRLHSRQ 634

Query: 121 VQHTFRFYSQQWRTWASCFIQAAWRRYLKRKIAELRRKEEEEE----VAAAYSTSRLGAT 180
           VQHTFRFYSQQWRTWASCFIQAAWRRYLKRKIAELRRKEEEEE    V+AAYST+RLGAT
Sbjct: 635 VQHTFRFYSQQWRTWASCFIQAAWRRYLKRKIAELRRKEEEEEDAAAVSAAYSTTRLGAT 694

Query: 181 ILASRFAANALRGHRMRNVSGKSLISLQKPKEPDFSVYKGE 217
           ILASRFAANALRGHRMRNVSGKSLISLQKP EPDFSVYKG+
Sbjct: 695 ILASRFAANALRGHRMRNVSGKSLISLQKPAEPDFSVYKGD 735

[Close]

BLAST of Cucsat.G12742.T30 vs. ExPASy TrEMBL
Match: A0A5A7UGU2 (Putative cyclic nucleotide-gated ion channel 8 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold135G00930 PE=3 SV=1)

HSP 1 Score: 417 bits (1072), Expect = 9.50e-140
Identity = 213/221 (96.38%), Postives = 216/221 (97.74%), Query Frame = 0


Query: 1   MDERLLDAICERLKPTLYTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFYNRGIL 60
           MDERLLDAICERLKPTLYTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFYNRGIL
Sbjct: 515 MDERLLDAICERLKPTLYTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFYNRGIL 574

Query: 61  KEGDFCGEELLTWALDPKSGSNLPSSTRTVHALTEVEAFALEAEELKFVASQFRRLHSRQ 120
           KEGDFCGEELLTWALDPKSGSNLPSSTRTVHALTEVEAFALEAEELKFVASQFRRLHSRQ
Sbjct: 575 KEGDFCGEELLTWALDPKSGSNLPSSTRTVHALTEVEAFALEAEELKFVASQFRRLHSRQ 634

Query: 121 VQHTFRFYSQQWRTWASCFIQAAWRRYLKRKIAELRRKEEEEE----VAAAYSTSRLGAT 180
           VQHTFRFYSQQWRTWASCFIQAAWRRYLKRKIAELRRKEEEEE    V+AAYST+RLGAT
Sbjct: 635 VQHTFRFYSQQWRTWASCFIQAAWRRYLKRKIAELRRKEEEEEDAAAVSAAYSTTRLGAT 694

Query: 181 ILASRFAANALRGHRMRNVSGKSLISLQKPKEPDFSVYKGE 217
           ILASRFAANALRGHRMRNVSGKSLISLQKP EPDFSVYKG+
Sbjct: 695 ILASRFAANALRGHRMRNVSGKSLISLQKPAEPDFSVYKGD 735

[Close]

BLAST of Cucsat.G12742.T30 vs. ExPASy TrEMBL
Match: A0A1S3B7L8 (putative cyclic nucleotide-gated ion channel 8 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487043 PE=3 SV=1)

HSP 1 Score: 417 bits (1072), Expect = 9.50e-140
Identity = 213/221 (96.38%), Postives = 216/221 (97.74%), Query Frame = 0


Query: 1   MDERLLDAICERLKPTLYTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFYNRGIL 60
           MDERLLDAICERLKPTLYTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFYNRGIL
Sbjct: 515 MDERLLDAICERLKPTLYTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFYNRGIL 574

Query: 61  KEGDFCGEELLTWALDPKSGSNLPSSTRTVHALTEVEAFALEAEELKFVASQFRRLHSRQ 120
           KEGDFCGEELLTWALDPKSGSNLPSSTRTVHALTEVEAFALEAEELKFVASQFRRLHSRQ
Sbjct: 575 KEGDFCGEELLTWALDPKSGSNLPSSTRTVHALTEVEAFALEAEELKFVASQFRRLHSRQ 634

Query: 121 VQHTFRFYSQQWRTWASCFIQAAWRRYLKRKIAELRRKEEEEE----VAAAYSTSRLGAT 180
           VQHTFRFYSQQWRTWASCFIQAAWRRYLKRKIAELRRKEEEEE    V+AAYST+RLGAT
Sbjct: 635 VQHTFRFYSQQWRTWASCFIQAAWRRYLKRKIAELRRKEEEEEDAAAVSAAYSTTRLGAT 694

Query: 181 ILASRFAANALRGHRMRNVSGKSLISLQKPKEPDFSVYKGE 217
           ILASRFAANALRGHRMRNVSGKSLISLQKP EPDFSVYKG+
Sbjct: 695 ILASRFAANALRGHRMRNVSGKSLISLQKPAEPDFSVYKGD 735

The following BLAST results are available for this feature:

BLAST of Cucsat.G12742.T30 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S9N5	5.7e-94	77.83	Putative cyclic nucleotide-gated ion channel 7 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9FXH6	5.7e-94	76.82	Putative cyclic nucleotide-gated ion channel 8 OS=Arabidopsis thaliana OX=3702 G...	[more]
O82226	5.5e-89	76.99	Probable cyclic nucleotide-gated ion channel 6 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9M0A4	1.1e-86	77.67	Putative cyclic nucleotide-gated ion channel 9 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q8RWS9	7.4e-86	75.34	Probable cyclic nucleotide-gated ion channel 5 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of Cucsat.G12742.T30 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147453.1	5.36e-144	100.00	putative cyclic nucleotide-gated ion channel 8 [Cucumis sativus] >KAE8651236.1 h...	[more]
XP_008443457.1	6.90e-140	96.38	PREDICTED: putative cyclic nucleotide-gated ion channel 8 isoform X2 [Cucumis me...	[more]
KAA0053717.1	1.96e-139	96.38	putative cyclic nucleotide-gated ion channel 8 isoform X1 [Cucumis melo var. mak...	[more]
XP_008443455.1	1.96e-139	96.38	PREDICTED: putative cyclic nucleotide-gated ion channel 8 isoform X1 [Cucumis me...	[more]
XP_038905866.1	3.82e-138	94.57	putative cyclic nucleotide-gated ion channel 8 isoform X2 [Benincasa hispida]	[more]

BLAST of Cucsat.G12742.T30 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LFD3	8.96e-145	100.00	Cyclic nucleotide-binding domain-containing protein OS=Cucumis sativus OX=3659 G...	[more]
A0A1S3B824	3.34e-140	96.38	putative cyclic nucleotide-gated ion channel 8 isoform X2 OS=Cucumis melo OX=365...	[more]
A0A5D3D0I2	9.50e-140	96.38	Putative cyclic nucleotide-gated ion channel 8 isoform X1 OS=Cucumis melo var. m...	[more]
A0A5A7UGU2	9.50e-140	96.38	Putative cyclic nucleotide-gated ion channel 8 isoform X1 OS=Cucumis melo var. m...	[more]
A0A1S3B7L8	9.50e-140	96.38	putative cyclic nucleotide-gated ion channel 8 isoform X1 OS=Cucumis melo OX=365...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 145..165
None	No IPR available	PANTHER	PTHR45651	CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED	coord: 1..212
None	No IPR available	PANTHER	PTHR45651:SF64	CYCLIC NUCLEOTIDE-GATED ION CHANNEL 7-RELATED	coord: 1..212
IPR000595	Cyclic nucleotide-binding domain	SMART	SM00100	cnmp_10	coord: 1..128 e-value: 1.6E-11 score: 54.3
IPR000595	Cyclic nucleotide-binding domain	PFAM	PF00027	cNMP_binding	coord: 18..107 e-value: 1.0E-9 score: 38.3
IPR000595	Cyclic nucleotide-binding domain	PROSITE	PS50042	CNMP_BINDING_3	coord: 1..127 score: 13.4156
IPR000595	Cyclic nucleotide-binding domain	CDD	cd00038	CAP_ED	coord: 1..128 e-value: 3.86016E-20 score: 80.0626
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10	Jelly Rolls	coord: 1..115 e-value: 5.1E-42 score: 144.5
IPR000048	IQ motif, EF-hand binding site	PROSITE	PS50096	IQ	coord: 133..162 score: 6.9796
IPR018490	Cyclic nucleotide-binding-like	SUPERFAMILY	51206	cAMP-binding domain-like	coord: 1..115

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G12742	Cucsat.G12742	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G12742.T30.E1	Cucsat.G12742.T30.E1	exon
Cucsat.G12742.T30.E2	Cucsat.G12742.T30.E2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G12742.T30.C1	Cucsat.G12742.T30.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G12742.T30	Cucsat.G12742.T30-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
biological_process	GO:0071805	potassium ion transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0005515	protein binding
molecular_function	GO:0030552	cAMP binding
molecular_function	GO:0030553	cGMP binding
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0005249	voltage-gated potassium channel activity