Cucsat.G12725.T24 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G12725.T24
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	L10-interacting MYB domain-containing protein-like isoform X2
Location	ctg1838: 3082110 .. 3085474 (-)
RNA-Seq Expression	Cucsat.G12725.T24
Synteny	Cucsat.G12725.T24

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAATTATAAAACCGTTTTAGAATTCTAAACAACTTTCAAAAACGAGAAAAGAAAAAGTAATTGGAAAAACGCATTTTCGTTTTCAGAAAACACACACTTTTCAAAACCCTAAATCCTAATGCCTCTGGAAATCAACAAAGAAATAAGCCCTGAAGATTCATCCATCGTCCTCGCTCCTCTTCCTACTCAAGGTTTTTCAATCTTATTTTACTCTTTACTTTACTTTGTTCTTGTTTTTAGTTTTGATTGTTTCAATTCGATTGTATTCTATAGCATCAATTTCTTCATATGTAATCTCAATGCAGTTTGCTTTGTCCTGTTCCTTTTCATCTTTTTCTTCCTCGCATTATAGCTGACTAGTGGTTTGTTCTTTAACTGGAGATTTGATTCTACTGTTGGCTTAAGTAATTGGTTTGCCAATGTCAATTGCTCTGCTGCAAAACAGGGCATGATTGAACTCCATTGTTGTTGCATTGAACAATGTCATTTGGGATTTTGGGCTGTGACTCCACACTTATATCTTTTAGGAGGAGCTTCTTCCATTTGTCATTGGATCTTGATCATCTTTCGATTGTGGGTTCTGATTCATAATCGTACTCATCTCTATCATCTTTCACTTCCATAACAGATTTTTCGACACTTCTCAATACATCATCATCAAATTCGGTTTCTTCTTCCACATTTTCATGGGGTAGAGACAGTTCTTCAGCTGAAGCATTCATCAGTCTTACTCTTCTTCAAAATCTTCTTCAATTGTATTTTCCAATTCACAAGTAGACTCATTTTGTTTAGATCCAACTTCCCTACCAGATTCTTTTACAATGCTCCTTTTGTGAACAACTACTTCAGTTGGCAGAGAAAATCAATTTCCTCAGCAGAAATCTTCACAAAAGCATCATCTTGGCAAGCTTCATTTGCTTCTTCATCTTCAGAGAAGCATGTCACATCCAAATTAGCATGTGGTGCCTCTATTTCAGTATGATCACCACTCTTATCTCTAACTAGATTTTCTTCAGAAGATTTCAAGGGATCATCAAGAACCATTTCTCTGGTTTCAGACTTCATCTCATTCTTCTCTCGTTCATCAACTTCGATGTCCAAATCTTCATTTAATTTTCTTTCTGGTTCATTGGTTTTCTTTGACGCAGTTTCTAATTCTGCATCCTTCTTCACGGGTCCTGAACAGTTAGGCATATCATCGAACGAAATATGGATAGTAATTGACTCCATTCTCCCCTTTTCCCCTAAACTCAATCTCTCCATGTTCTTGTCCAACAATCTGACGGACCTCCTTGTACTGCAATCTTGCTGCTCTACAGCTTCATTGTTCTGAGTCTTGGTTTGTTTACAGGTTAAGGCCCCCACAACACTACTGGCTTTTAGGCACAGCTGACGTTTTTCTATTTGCATTATTTTCTTGATCCCGATCATTGTTCTTTTACTGATCATCAACCATCATCTGAAAATCCACTTTCTTGCAAGCTGAAGAAGCTGCCACTGTCCTTCTCCAGCCACCTGGAAAGGACAGAGTAGTCGAAGCCACAATTAGATCTCTGTTTTCTGATTCCCTTGTGTCTCTTGCTTCTGCAGCAGAACGTGTTTGAGTAGTAATTGCAGTAGTAATTGTCTCATCTTCGACTATGACATCCTTTCTTCTTGTCAAAGATATCAATGCAGTTCAGGTATTTCCAAGGAAACCTATGCTTCCATCGGGGATTTAGGTATCCTTGATCTTTTACTGTTAAAAAATTCTTTGATTCTTTCAACGGATGGAAGAGTGTCAGCCATGATGACATTAGTGATATTGGCCGGAATCTTATTCCTCTTGCAGAGTGCTTGGTGCTCTCTTCTTGACAAGGTATTGAAATCCATGGCTGTAGGAAGATAAAGTTTTGTATGGATTGAAGAAATTTTGCACTGCCACAGGAAATGAGGGGATTCCAATTGGAGTTTGGGGACTTGAACCACAGATCGTGGTCGCTAATACACTTGGATGTTAGTTGAGCTATGCTCGCTTTGGCATGTCTTATGATTTCTTAGATGTTTGCTTTCTTTGATCTTGGATGGACCATTATTATCTCTCTTAAATTTTCTGTCAGTAAACTTAGATCTCTTAGTATGGCTATCATATATCTCTTCAAGTTGGAGGTTCAAAACTTCGTACCTTGCTTTATTCGGAAAATTTTTTTGTTAGTAATTGAAACTACTAAGTTTTCTCCCTTCAAAAGTCCTCTTGGTCGTTTGCATCCTGTATGTTAAAATAATTCTAACAGTTCGCAGACAAAGATTATTTCTTATTCTCAATCAAATTTAGGTGGGCGCCTCTATAAATATGTTCCTTTATGCAACCGTTTATATAGATGAAGATACTAAAGTAAGATTGTTATTTTCAGGATTCATGAAGATCAATCATATTGAAGATGTTAATCAAATTGATGTATCAAGATTTGATGGGCCTTGGTCATTTAAAAATGAGACAATTTTTATCAATTTGATGGAAGATGAAGTTGCAAAAGGAAATCGTCCAACTACAACCTTTACCAAAACTAGTTGGACTTATATAAAGGAACAACTGTATGTAAAAACAGGATATGCTTATTCTCATGAACAATTGAAAAATAAGTATAACAGTCTTAGACATCGTTACAAAGAATTCAAAAAGTTGTTGAGTGATATTAATGGAAAAGGTTGGGATCCTGTATTGGGAACTATTACTTTAGGAGAGGCGCAGTGGACTAATCTCATTAAGGTACTGTTTCAATTACTGTTATTTAATCTTTGTCATTACTCTATGATAAAATAATTTTACCAAGAGCTATAAGTTGGTAAAATTTTGTAGGTTAACAAGAAAGCTAAGAAGTTCAAAAAGAGTGGATGTCCACATTACGGAAAATTGATGGGAATATATGGAGATACAATTGCAACAACAGAGCTTGATGCTCTTCCATCTACAAAACTTTCTTCAGATTCTGAATATGATAATAAAACAGAAAGTGATTCTCCGATGAGCAATGAAGATTGTGGAAATAGTAGAGATGAAAATCAAGGTCAAAGTAGTATGAGCAAGAAATCTAAAAGAAAAAGAGAAGTCCTAAATGATATAATGTCATCTTTCAAGGAAGCTTATGTTGAGAATTTAAAGAGGAGAAATGATATACTTGAAGGAAGACTTGTTGGTTTTCCATCAGGTGAATTTAGCGAAATTTCGTCAAAAGAAAGAGATTATGCTGATGAAGACTTAAACAAATGCATCAAAATTTTAAATAGCATGGTCGATATTGATGATAAAGCCTATACAAAAGTATTGAAACAATTGGTTGCTGACACTACTTGGAGAAAAGCATTTTTGTGTATTCCTGAATCA

Coding sequence (CDS)

ATGCCTCTGGAAATCAACAAAGAAATAAGCCCTGAAGATTCATCCATCGTCCTCGCTCCTCTTCCTACTCAAGGATTCATGAAGATCAATCATATTGAAGATGTTAATCAAATTGATGTATCAAGATTTGATGGGCCTTGGTCATTTAAAAATGAGACAATTTTTATCAATTTGATGGAAGATGAAGTTGCAAAAGGAAATCGTCCAACTACAACCTTTACCAAAACTAGTTGGACTTATATAAAGGAACAACTGTATGTAAAAACAGGATATGCTTATTCTCATGAACAATTGAAAAATAAGTATAACAGTCTTAGACATCGTTACAAAGAATTCAAAAAGTTGTTGAGTGATATTAATGGAAAAGGTTGGGATCCTGTATTGGGAACTATTACTTTAGGAGAGGCGCAGTGGACTAATCTCATTAAGGTACTGTTTCAATTACTGTTATTTAATCTTTGTCATTACTCTATGATAAAATAA

Protein sequence

MPLEINKEISPEDSSIVLAPLPTQGFMKINHIEDVNQIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLYVKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKVLFQLLLFNLCHYSMIK

Homology

[Close]

BLAST of Cucsat.G12725.T24 vs. ExPASy Swiss-Prot
Match: Q9FFJ8 (L10-interacting MYB domain-containing protein OS=Arabidopsis thaliana OX=3702 GN=LIMYB PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.7e-08
Identity = 33/99 (33.33%), Postives = 49/99 (49.49%), Query Frame = 0


Query: 45  GPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLYVKTGYAYSHEQLKNKYNS 104
           G WS     +F++L+  E  KGNRP T F K  W  I   +   TG  Y+  QLKN ++ 
Sbjct: 168 GYWSPSTHKLFLDLLVQETLKGNRPDTHFNKEGWKTILGTINENTGLGYTRPQLKNHWDC 227

Query: 105 LRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIK 144
            R  +K + +L+   + K WDP   +    E +W   I+
Sbjct: 228 TRKAWKIWCQLVGASSMK-WDPESRSFGATEEEWRIYIR 265

[Close]

BLAST of Cucsat.G12725.T24 vs. NCBI nr
Match: KAE8651219.1 (hypothetical protein Csa_000986 [Cucumis sativus])

HSP 1 Score: 299 bits (766), Expect = 1.59e-99
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 1   MPLEINKEISPEDSSIVLAPLPTQGFMKINHIEDVNQIDVSRFDGPWSFKNETIFINLME 60
           MPLEINKEISPEDSSIVLAPLPTQGFMKINHIEDVNQIDVSRFDGPWSFKNETIFINLME
Sbjct: 1   MPLEINKEISPEDSSIVLAPLPTQGFMKINHIEDVNQIDVSRFDGPWSFKNETIFINLME 60

Query: 61  DEVAKGNRPTTTFTKTSWTYIKEQLYVKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDIN 120
           DEVAKGNRPTTTFTKTSWTYIKEQLYVKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDIN
Sbjct: 61  DEVAKGNRPTTTFTKTSWTYIKEQLYVKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDIN 120

Query: 121 GKGWDPVLGTITLGEAQWTNLIKV 144
           GKGWDPVLGTITLGEAQWTNLIKV
Sbjct: 121 GKGWDPVLGTITLGEAQWTNLIKV 144

[Close]

BLAST of Cucsat.G12725.T24 vs. NCBI nr
Match: XP_008443406.1 (PREDICTED: uncharacterized protein LOC103487000 isoform X1 [Cucumis melo])

HSP 1 Score: 286 bits (732), Expect = 2.31e-94
Identity = 138/144 (95.83%), Postives = 140/144 (97.22%), Query Frame = 0


Query: 1   MPLEINKEISPEDSSIVLAPLPTQGFMKINHIEDVNQIDVSRFDGPWSFKNETIFINLME 60
           MP E NKE SPEDSSIVLAPLP+QGFMKIN IEDV+QIDVSRFDGPWSFKNETIFINLME
Sbjct: 1   MPPETNKETSPEDSSIVLAPLPSQGFMKINRIEDVHQIDVSRFDGPWSFKNETIFINLME 60

Query: 61  DEVAKGNRPTTTFTKTSWTYIKEQLYVKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDIN 120
           DEVAKGNRPTTTFTKTSWTYIKEQLYVKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDIN
Sbjct: 61  DEVAKGNRPTTTFTKTSWTYIKEQLYVKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDIN 120

Query: 121 GKGWDPVLGTITLGEAQWTNLIKV 144
           GKGWDPVLGTITLGEAQWTNLIKV
Sbjct: 121 GKGWDPVLGTITLGEAQWTNLIKV 144

[Close]

BLAST of Cucsat.G12725.T24 vs. NCBI nr
Match: XP_038904552.1 (L10-interacting MYB domain-containing protein-like isoform X1 [Benincasa hispida])

HSP 1 Score: 256 bits (655), Expect = 1.07e-82
Identity = 123/144 (85.42%), Postives = 131/144 (90.97%), Query Frame = 0


Query: 1   MPLEINKEISPEDSSIVLAPLPTQGFMKINHIEDVNQIDVSRFDGPWSFKNETIFINLME 60
           MPLE N+E SPED SI LAP  TQGFMK N IEDV QID S+FDGPWSFKNE+IFI+LME
Sbjct: 1   MPLETNEERSPEDPSIDLAPPATQGFMKTNCIEDVTQIDASKFDGPWSFKNESIFIDLME 60

Query: 61  DEVAKGNRPTTTFTKTSWTYIKEQLYVKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDIN 120
           +EVAKGNRPTTTFTKTSWTYIKEQLYV+TGYAY+HEQLKNKYNSLRHRYKEFK+LL DIN
Sbjct: 61  EEVAKGNRPTTTFTKTSWTYIKEQLYVRTGYAYTHEQLKNKYNSLRHRYKEFKRLLGDIN 120

Query: 121 GKGWDPVLGTITLGEAQWTNLIKV 144
           GKGWDPVLGTITL E QWTNLIKV
Sbjct: 121 GKGWDPVLGTITLEEEQWTNLIKV 144

[Close]

BLAST of Cucsat.G12725.T24 vs. NCBI nr
Match: XP_031738598.1 (L10-interacting MYB domain-containing protein [Cucumis sativus])

HSP 1 Score: 249 bits (635), Expect = 5.28e-80
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 27  MKINHIEDVNQIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLY 86
           MKINHIEDVNQIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLY
Sbjct: 1   MKINHIEDVNQIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLY 60

Query: 87  VKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKV 144
           VKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKV
Sbjct: 61  VKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKV 118

[Close]

BLAST of Cucsat.G12725.T24 vs. NCBI nr
Match: XP_016899632.1 (PREDICTED: L10-interacting MYB domain-containing protein-like isoform X2 [Cucumis melo])

HSP 1 Score: 244 bits (622), Expect = 4.94e-78
Identity = 116/118 (98.31%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 27  MKINHIEDVNQIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLY 86
           MKIN IEDV+QIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLY
Sbjct: 1   MKINRIEDVHQIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLY 60

Query: 87  VKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKV 144
           VKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKV
Sbjct: 61  VKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKV 118

[Close]

BLAST of Cucsat.G12725.T24 vs. ExPASy TrEMBL
Match: A0A1S3B8P1 (uncharacterized protein LOC103487000 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487000 PE=4 SV=1)

HSP 1 Score: 286 bits (732), Expect = 1.12e-94
Identity = 138/144 (95.83%), Postives = 140/144 (97.22%), Query Frame = 0


Query: 1   MPLEINKEISPEDSSIVLAPLPTQGFMKINHIEDVNQIDVSRFDGPWSFKNETIFINLME 60
           MP E NKE SPEDSSIVLAPLP+QGFMKIN IEDV+QIDVSRFDGPWSFKNETIFINLME
Sbjct: 1   MPPETNKETSPEDSSIVLAPLPSQGFMKINRIEDVHQIDVSRFDGPWSFKNETIFINLME 60

Query: 61  DEVAKGNRPTTTFTKTSWTYIKEQLYVKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDIN 120
           DEVAKGNRPTTTFTKTSWTYIKEQLYVKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDIN
Sbjct: 61  DEVAKGNRPTTTFTKTSWTYIKEQLYVKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDIN 120

Query: 121 GKGWDPVLGTITLGEAQWTNLIKV 144
           GKGWDPVLGTITLGEAQWTNLIKV
Sbjct: 121 GKGWDPVLGTITLGEAQWTNLIKV 144

[Close]

BLAST of Cucsat.G12725.T24 vs. ExPASy TrEMBL
Match: A0A1S4DUG7 (L10-interacting MYB domain-containing protein-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487000 PE=4 SV=1)

HSP 1 Score: 244 bits (622), Expect = 2.39e-78
Identity = 116/118 (98.31%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 27  MKINHIEDVNQIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLY 86
           MKIN IEDV+QIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLY
Sbjct: 1   MKINRIEDVHQIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLY 60

Query: 87  VKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKV 144
           VKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKV
Sbjct: 61  VKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKV 118

[Close]

BLAST of Cucsat.G12725.T24 vs. ExPASy TrEMBL
Match: A0A1S3CFA7 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo OX=3656 GN=LOC103500275 PE=4 SV=1)

HSP 1 Score: 124 bits (312), Expect = 2.91e-32
Identity = 56/96 (58.33%), Postives = 72/96 (75.00%), Query Frame = 0


Query: 38  IDVSRFDGP--WSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLYVKTGYAYSH 97
           +D+    G   WS K+E +F++LM++EVAKGNRPTTTFTKTSW Y++ +L   TGY YSH
Sbjct: 3   VDIDGLKGERLWSNKSEALFVDLMDEEVAKGNRPTTTFTKTSWNYMRSELNANTGYNYSH 62

Query: 98  EQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTI 131
           +QLKNK+N LR   K FKK+LSD+ G GWDP+ G I
Sbjct: 63  DQLKNKFNKLRKICKAFKKILSDMTGNGWDPLFGVI 98

[Close]

BLAST of Cucsat.G12725.T24 vs. ExPASy TrEMBL
Match: A0A7J6GD05 (Myb_DNA-bind_3 domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_017168 PE=4 SV=1)

HSP 1 Score: 102 bits (255), Expect = 2.76e-24
Identity = 52/98 (53.06%), Postives = 66/98 (67.35%), Query Frame = 0


Query: 47  WSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLYVKTGYAYSHEQLKNKYNSLR 106
           W  K+E IFI LME+EV KGNR TTTFTK SW  IKE+LY +   +Y+  QL+NKYN LR
Sbjct: 19  WPEKHEEIFIELMEEEVLKGNRNTTTFTKQSWKRIKEELYAQAKRSYTDTQLRNKYNLLR 78

Query: 107 HRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKV 144
            R+K+FK LL +  G G+  V G +T  +  W  LI+V
Sbjct: 79  QRHKDFKSLLKET-GIGFSVVTGQVTAPDEVWDRLIRV 115

[Close]

BLAST of Cucsat.G12725.T24 vs. ExPASy TrEMBL
Match: A0A2P5F3H5 (Myb/SANT-like domain containing protein (Fragment) OS=Trema orientale OX=63057 GN=TorRG33x02_118580 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 6.32e-24
Identity = 50/111 (45.05%), Postives = 75/111 (67.57%), Query Frame = 0


Query: 34  DVNQIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLYVKTGYAY 93
           DV++ID +     W+ +++ IFI+LME+EV KGNR TTTF+K SW YI+E+L  +T   Y
Sbjct: 7   DVHKIDNNDEASIWTQRHKEIFIDLMEEEVIKGNRSTTTFSKPSWKYIREELCAQTKKGY 66

Query: 94  SHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKV 144
           S  QL+NK+N L+ + KEFK LL +  G G++ V G ++  +  W  L++V
Sbjct: 67  SDLQLRNKFNQLKQKQKEFKMLLGET-GIGYNAVTGQVSTTDEVWDKLMQV 116

The following BLAST results are available for this feature:

BLAST of Cucsat.G12725.T24 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFJ8	2.7e-08	33.33	L10-interacting MYB domain-containing protein OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Cucsat.G12725.T24 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8651219.1	1.59e-99	100.00	hypothetical protein Csa_000986 [Cucumis sativus]	[more]
XP_008443406.1	2.31e-94	95.83	PREDICTED: uncharacterized protein LOC103487000 isoform X1 [Cucumis melo]	[more]
XP_038904552.1	1.07e-82	85.42	L10-interacting MYB domain-containing protein-like isoform X1 [Benincasa hispida...	[more]
XP_031738598.1	5.28e-80	100.00	L10-interacting MYB domain-containing protein [Cucumis sativus]	[more]
XP_016899632.1	4.94e-78	98.31	PREDICTED: L10-interacting MYB domain-containing protein-like isoform X2 [Cucumi...	[more]

BLAST of Cucsat.G12725.T24 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B8P1	1.12e-94	95.83	uncharacterized protein LOC103487000 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S4DUG7	2.39e-78	98.31	L10-interacting MYB domain-containing protein-like isoform X2 OS=Cucumis melo OX...	[more]
A0A1S3CFA7	2.91e-32	58.33	L10-interacting MYB domain-containing protein-like OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A7J6GD05	2.76e-24	53.06	Myb_DNA-bind_3 domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_017...	[more]
A0A2P5F3H5	6.32e-24	45.05	Myb/SANT-like domain containing protein (Fragment) OS=Trema orientale OX=63057 G...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 95..115
None	No IPR available	PANTHER	PTHR47584:SF14	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN	coord: 42..143
None	No IPR available	PANTHER	PTHR47584	FAMILY NOT NAMED	coord: 42..143
IPR024752	Myb/SANT-like domain	PFAM	PF12776	Myb_DNA-bind_3	coord: 47..140 e-value: 1.1E-17 score: 64.8

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G12725	Cucsat.G12725	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G12725.T24.E1	Cucsat.G12725.T24.E1	exon
Cucsat.G12725.T24.E2	Cucsat.G12725.T24.E2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G12725.T24.C2	Cucsat.G12725.T24.C2	CDS
Cucsat.G12725.T24.C1	Cucsat.G12725.T24.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G12725.T24	Cucsat.G12725.T24-protein	polypeptide