Cucsat.G12725.T23 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G12725.T23
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	L10-interacting MYB domain-containing protein-like isoform X2
Location	ctg1838: 3081896 .. 3085328 (-)
RNA-Seq Expression	Cucsat.G12725.T23
Synteny	Cucsat.G12725.T23

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCCCTGAAGATTCATCCATCGTCCTCGCTCCTCTTCCTACTCAAGGTTTTTCAATCTTATTTTACTCTTTACTTTACTTTGTTCTTGTTTTTAGTTTTGATTGTTTCAATTCGATTGTATTCTATAGCATCAATTTCTTCATATGTAATCTCAATGCAGTTTGCTTTGTCCTGTTCCTTTTCATCTTTTTCTTCCTCGCATTATAGCTGACTAGTGGTTTGTTCTTTAACTGGAGATTTGATTCTACTGTTGGCTTAAGTAATTGGTTTGCCAATGTCAATTGCTCTGCTGCAAAACAGGGCATGATTGAACTCCATTGTTGTTGCATTGAACAATGTCATTTGGGATTTTGGGCTGTGACTCCACACTTATATCTTTTAGGAGGAGCTTCTTCCATTTGTCATTGGATCTTGATCATCTTTCGATTGTGGGTTCTGATTCATAATCGTACTCATCTCTATCATCTTTCACTTCCATAACAGATTTTTCGACACTTCTCAATACATCATCATCAAATTCGGTTTCTTCTTCCACATTTTCATGGGGTAGAGACAGTTCTTCAGCTGAAGCATTCATCAGTCTTACTCTTCTTCAAAATCTTCTTCAATTGTATTTTCCAATTCACAAGTAGACTCATTTTGTTTAGATCCAACTTCCCTACCAGATTCTTTTACAATGCTCCTTTTGTGAACAACTACTTCAGTTGGCAGAGAAAATCAATTTCCTCAGCAGAAATCTTCACAAAAGCATCATCTTGGCAAGCTTCATTTGCTTCTTCATCTTCAGAGAAGCATGTCACATCCAAATTAGCATGTGGTGCCTCTATTTCAGTATGATCACCACTCTTATCTCTAACTAGATTTTCTTCAGAAGATTTCAAGGGATCATCAAGAACCATTTCTCTGGTTTCAGACTTCATCTCATTCTTCTCTCGTTCATCAACTTCGATGTCCAAATCTTCATTTAATTTTCTTTCTGGTTCATTGGTTTTCTTTGACGCAGTTTCTAATTCTGCATCCTTCTTCACGGGTCCTGAACAGTTAGGCATATCATCGAACGAAATATGGATAGTAATTGACTCCATTCTCCCCTTTTCCCCTAAACTCAATCTCTCCATGTTCTTGTCCAACAATCTGACGGACCTCCTTGTACTGCAATCTTGCTGCTCTACAGCTTCATTGTTCTGAGTCTTGGTTTGTTTACAGGTTAAGGCCCCCACAACACTACTGGCTTTTAGGCACAGCTGACGTTTTTCTATTTGCATTATTTTCTTGATCCCGATCATTGTTCTTTTACTGATCATCAACCATCATCTGAAAATCCACTTTCTTGCAAGCTGAAGAAGCTGCCACTGTCCTTCTCCAGCCACCTGGAAAGGACAGAGTAGTCGAAGCCACAATTAGATCTCTGTTTTCTGATTCCCTTGTGTCTCTTGCTTCTGCAGCAGAACGTGTTTGAGTAGTAATTGCAGTAGTAATTGTCTCATCTTCGACTATGACATCCTTTCTTCTTGTCAAAGATATCAATGCAGTTCAGGTATTTCCAAGGAAACCTATGCTTCCATCGGGGATTTAGGTATCCTTGATCTTTTACTGTTAAAAAATTCTTTGATTCTTTCAACGGATGGAAGAGTGTCAGCCATGATGACATTAGTGATATTGGCCGGAATCTTATTCCTCTTGCAGAGTGCTTGGTGCTCTCTTCTTGACAAGGTATTGAAATCCATGGCTGTAGGAAGATAAAGTTTTGTATGGATTGAAGAAATTTTGCACTGCCACAGGAAATGAGGGGATTCCAATTGGAGTTTGGGGACTTGAACCACAGATCGTGGTCGCTAATACACTTGGATGTTAGTTGAGCTATGCTCGCTTTGGCATGTCTTATGATTTCTTAGATGTTTGCTTTCTTTGATCTTGGATGGACCATTATTATCTCTCTTAAATTTTCTGTCAGTAAACTTAGATCTCTTAGTATGGCTATCATATATCTCTTCAAGTTGGAGGTTCAAAACTTCGTACCTTGCTTTATTCGGAAAATTTTTTTGTTAGTAATTGAAACTACTAAGTTTTCTCCCTTCAAAAGTCCTCTTGGTCGTTTGCATCCTGTATGTTAAAATAATTCTAACAGTTCGCAGACAAAGATTATTTCTTATTCTCAATCAAATTTAGGTGGGCGCCTCTATAAATATGTTCCTTTATGCAACCGTTTATATAGATGAAGATACTAAAGTAAGATTGTTATTTTCAGGATTCATGAAGATCAATCATATTGAAGATGTTAATCAAATTGATGTATCAAGATTTGATGGGCCTTGGTCATTTAAAAATGAGACAATTTTTATCAATTTGATGGAAGATGAAGTTGCAAAAGGAAATCGTCCAACTACAACCTTTACCAAAACTAGTTGGACTTATATAAAGGAACAACTGTATGTAAAAACAGGATATGCTTATTCTCATGAACAATTGAAAAATAAGTATAACAGTCTTAGACATCGTTACAAAGAATTCAAAAAGTTGTTGAGTGATATTAATGGAAAAGGTTGGGATCCTGTATTGGGAACTATTACTTTAGGAGAGGCGCAGTGGACTAATCTCATTAAGGTACTGTTTCAATTACTGTTATTTAATCTTTGTCATTACTCTATGATAAAATAATTTTACCAAGAGCTATAAGTTGGTAAAATTTTGTAGGTTAACAAGAAAGCTAAGAAGTTCAAAAAGAGTGGATGTCCACATTACGGAAAATTGATGGGAATATATGGAGATACAATTGCAACAACAGAGCTTGATGCTCTTCCATCTACAAAACTTTCTTCAGATTCTGAATATGATAATAAAACAGAAAGTGATTCTCCGATGAGCAATGAAGATTGTGGAAATAGTAGAGATGAAAATCAAGGTCAAAGTAGTATGAGCAAGAAATCTAAAAGAAAAAGAGAAGTCCTAAATGATATAATGTCATCTTTCAAGGAAGCTTATGTTGAGAATTTAAAGAGGAGAAATGATATACTTGAAGGAAGACTTGTTGGTTTTCCATCAGGTGAATTTAGCGAAATTTCGTCAAAAGAAAGAGATTATGCTGATGAAGACTTAAACAAATGCATCAAAATTTTAAATAGCATGGTCGATATTGATGATAAAGCCTATACAAAAGTATTGAAACAATTGGTTGCTGACACTACTTGGAGAAAAGCATTTTTGTGTATTCCTGAATCAAGAAGGAGAGGATTTGTTAATAATCTTTAATTATTTAACTAACTAATTAGGTTAGATGATGGTTTGTACAATTTTATATAGTTTTAGAAAAAGAAAAACTTATACTTTAACTACTTGTTAAATGTTTTTGGGTTTTATAGTTTATATGTTAGAAAGACTTGGCTCATGCCTCTTTTTTTTTTCCCTTTTACGAGTTTATGATAATTTTTGGATG

Coding sequence (CDS)

ATGAAGATCAATCATATTGAAGATGTTAATCAAATTGATGTATCAAGATTTGATGGGCCTTGGTCATTTAAAAATGAGACAATTTTTATCAATTTGATGGAAGATGAAGTTGCAAAAGGAAATCGTCCAACTACAACCTTTACCAAAACTAGTTGGACTTATATAAAGGAACAACTGTATGTAAAAACAGGATATGCTTATTCTCATGAACAATTGAAAAATAAGTATAACAGTCTTAGACATCGTTACAAAGAATTCAAAAAGTTGTTGAGTGATATTAATGGAAAAGGTTGGGATCCTGTATTGGGAACTATTACTTTAGGAGAGGCGCAGTGGACTAATCTCATTAAGGTTAACAAGAAAGCTAAGAAGTTCAAAAAGAGTGGATGTCCACATTACGGAAAATTGATGGGAATATATGGAGATACAATTGCAACAACAGAGCTTGATGCTCTTCCATCTACAAAACTTTCTTCAGATTCTGAATATGATAATAAAACAGAAAGTGATTCTCCGATGAGCAATGAAGATTGTGGAAATAGTAGAGATGAAAATCAAGGTCAAAGTAGTATGAGCAAGAAATCTAAAAGAAAAAGAGAAGTCCTAAATGATATAATGTCATCTTTCAAGGAAGCTTATGTTGAGAATTTAAAGAGGAGAAATGATATACTTGAAGGAAGACTTGTTGGTTTTCCATCAGGTGAATTTAGCGAAATTTCGTCAAAAGAAAGAGATTATGCTGATGAAGACTTAAACAAATGCATCAAAATTTTAAATAGCATGGTCGATATTGATGATAAAGCCTATACAAAAGTATTGAAACAATTGGTTGCTGACACTACTTGGAGAAAAGCATTTTTGTGTATTCCTGAATCAAGAAGGAGAGGATTTGTTAATAATCTTTAA

Protein sequence

MKINHIEDVNQIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLYVKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKVNKKAKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTESDSPMSNEDCGNSRDENQGQSSMSKKSKRKREVLNDIMSSFKEAYVENLKRRNDILEGRLVGFPSGEFSEISSKERDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFVNNL

Homology

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BLAST of Cucsat.G12725.T23 vs. ExPASy Swiss-Prot
Match: Q9FFJ8 (L10-interacting MYB domain-containing protein OS=Arabidopsis thaliana OX=3702 GN=LIMYB PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 2.0e-12
Identity = 68/247 (27.53%), Postives = 115/247 (46.56%), Query Frame = 0


Query: 19  GPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLYVKTGYAYSHEQLKNKYNS 78
           G WS     +F++L+  E  KGNRP T F K  W  I   +   TG  Y+  QLKN ++ 
Sbjct: 168 GYWSPSTHKLFLDLLVQETLKGNRPDTHFNKEGWKTILGTINENTGLGYTRPQLKNHWDC 227

Query: 79  LRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKVNKKAKKFKKSGCPHYGKLMG 138
            R  +K + +L+   + K WDP   +    E +W   I+ N +A +F+    PH  +L  
Sbjct: 228 TRKAWKIWCQLVGASSMK-WDPESRSFGATEEEWRIYIRENPRAGQFRHKEVPHADQLAI 287

Query: 139 IYGDTIATTELDALPSTKLSSDSEYDNKTESDSPMSNEDCGNSRDENQGQSSMSKKSKRK 198
           I+   I   E    PS   S      N+  S+SP   +    S+  +  ++  S+++   
Sbjct: 288 IFNGVIEPGETYTPPSR--SRKKLLHNR--SESPQWRDTTPLSK-MHVDEAETSRQNGCY 347

Query: 199 REVLNDIMSSFKEAYVENLKRRNDILEGRLVGFPSGEFSEISSKERDYADEDLNKCIKIL 258
            E   D + S     ++++K  ND++        S  F EI S +  Y+   + +CIK L
Sbjct: 348 AESQEDRIDSENAQPLDDMKLMNDVMLQE-----SPVFVEIESAKPMYS---IGECIKSL 400

Query: 259 NSMVDID 266
           N++ +++
Sbjct: 408 NAIEEVE 400

[Close]

BLAST of Cucsat.G12725.T23 vs. NCBI nr
Match: XP_031738598.1 (L10-interacting MYB domain-containing protein [Cucumis sativus])

HSP 1 Score: 601 bits (1550), Expect = 8.16e-217
Identity = 300/301 (99.67%), Postives = 300/301 (99.67%), Query Frame = 0


Query: 1   MKINHIEDVNQIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLY 60
           MKINHIEDVNQIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLY
Sbjct: 1   MKINHIEDVNQIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLY 60

Query: 61  VKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKVNK 120
           VKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKVNK
Sbjct: 61  VKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKVNK 120

Query: 121 KAKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTESDSPMSNEDCGN 180
           KAKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTESDSPMSNEDCGN
Sbjct: 121 KAKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTESDSPMSNEDCGN 180

Query: 181 SRDENQGQSSMSKKSKRKREVLNDIMSSFKEAYVENLKRRNDILEGRLVGFPSGEFSEIS 240
           SRDENQGQSSMSKKSKRKREVLNDIMSSFKEAYVENLKRRNDILEGRL GFPSGEFSEIS
Sbjct: 181 SRDENQGQSSMSKKSKRKREVLNDIMSSFKEAYVENLKRRNDILEGRLFGFPSGEFSEIS 240

Query: 241 SKERDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFVNN 300
           SKERDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFVNN
Sbjct: 241 SKERDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFVNN 300

[Close]

BLAST of Cucsat.G12725.T23 vs. NCBI nr
Match: KAE8651219.1 (hypothetical protein Csa_000986 [Cucumis sativus])

HSP 1 Score: 601 bits (1550), Expect = 2.15e-216
Identity = 300/301 (99.67%), Postives = 300/301 (99.67%), Query Frame = 0


Query: 1   MKINHIEDVNQIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLY 60
           MKINHIEDVNQIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLY
Sbjct: 27  MKINHIEDVNQIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLY 86

Query: 61  VKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKVNK 120
           VKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKVNK
Sbjct: 87  VKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKVNK 146

Query: 121 KAKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTESDSPMSNEDCGN 180
           KAKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTESDSPMSNEDCGN
Sbjct: 147 KAKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTESDSPMSNEDCGN 206

Query: 181 SRDENQGQSSMSKKSKRKREVLNDIMSSFKEAYVENLKRRNDILEGRLVGFPSGEFSEIS 240
           SRDENQGQSSMSKKSKRKREVLNDIMSSFKEAYVENLKRRNDILEGRL GFPSGEFSEIS
Sbjct: 207 SRDENQGQSSMSKKSKRKREVLNDIMSSFKEAYVENLKRRNDILEGRLFGFPSGEFSEIS 266

Query: 241 SKERDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFVNN 300
           SKERDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFVNN
Sbjct: 267 SKERDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFVNN 326

[Close]

BLAST of Cucsat.G12725.T23 vs. NCBI nr
Match: XP_016899632.1 (PREDICTED: L10-interacting MYB domain-containing protein-like isoform X2 [Cucumis melo])

HSP 1 Score: 575 bits (1482), Expect = 1.90e-206
Identity = 287/301 (95.35%), Postives = 292/301 (97.01%), Query Frame = 0


Query: 1   MKINHIEDVNQIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLY 60
           MKIN IEDV+QIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLY
Sbjct: 1   MKINRIEDVHQIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLY 60

Query: 61  VKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKVNK 120
           VKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKVNK
Sbjct: 61  VKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKVNK 120

Query: 121 KAKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTESDSPMSNEDCGN 180
            AKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTESD+PMSNED GN
Sbjct: 121 NAKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTESDAPMSNEDYGN 180

Query: 181 SRDENQGQSSMSKKSKRKREVLNDIMSSFKEAYVENLKRRNDILEGRLVGFPSGEFSEIS 240
           +RDEN GQSSMSKKSKRKRE++NDIMSSFKEAYVENLKRRNDILEGRL G  SGEFSE S
Sbjct: 181 NRDENHGQSSMSKKSKRKREIINDIMSSFKEAYVENLKRRNDILEGRLFGLSSGEFSETS 240

Query: 241 SKERDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFVNN 300
           SK RDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFVNN
Sbjct: 241 SKARDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFVNN 300

[Close]

BLAST of Cucsat.G12725.T23 vs. NCBI nr
Match: XP_008443406.1 (PREDICTED: uncharacterized protein LOC103487000 isoform X1 [Cucumis melo])

HSP 1 Score: 575 bits (1482), Expect = 4.96e-206
Identity = 287/301 (95.35%), Postives = 292/301 (97.01%), Query Frame = 0


Query: 1   MKINHIEDVNQIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLY 60
           MKIN IEDV+QIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLY
Sbjct: 27  MKINRIEDVHQIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLY 86

Query: 61  VKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKVNK 120
           VKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKVNK
Sbjct: 87  VKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKVNK 146

Query: 121 KAKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTESDSPMSNEDCGN 180
            AKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTESD+PMSNED GN
Sbjct: 147 NAKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTESDAPMSNEDYGN 206

Query: 181 SRDENQGQSSMSKKSKRKREVLNDIMSSFKEAYVENLKRRNDILEGRLVGFPSGEFSEIS 240
           +RDEN GQSSMSKKSKRKRE++NDIMSSFKEAYVENLKRRNDILEGRL G  SGEFSE S
Sbjct: 207 NRDENHGQSSMSKKSKRKREIINDIMSSFKEAYVENLKRRNDILEGRLFGLSSGEFSETS 266

Query: 241 SKERDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFVNN 300
           SK RDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFVNN
Sbjct: 267 SKARDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFVNN 326

[Close]

BLAST of Cucsat.G12725.T23 vs. NCBI nr
Match: XP_038904554.1 (L10-interacting MYB domain-containing protein-like isoform X3 [Benincasa hispida])

HSP 1 Score: 511 bits (1317), Expect = 2.55e-181
Identity = 254/300 (84.67%), Postives = 273/300 (91.00%), Query Frame = 0


Query: 1   MKINHIEDVNQIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLY 60
           MK N IEDV QID S+FDGPWSFKNE+IFI+LME+EVAKGNRPTTTFTKTSWTYIKEQLY
Sbjct: 1   MKTNCIEDVTQIDASKFDGPWSFKNESIFIDLMEEEVAKGNRPTTTFTKTSWTYIKEQLY 60

Query: 61  VKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKVNK 120
           V+TGYAY+HEQLKNKYNSLRHRYKEFK+LL DINGKGWDPVLGTITL E QWTNLIKVNK
Sbjct: 61  VRTGYAYTHEQLKNKYNSLRHRYKEFKRLLGDINGKGWDPVLGTITLEEEQWTNLIKVNK 120

Query: 121 KAKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTESDSPMSNEDCGN 180
           K KKFKKSGCPHY KLM IYGDT+A  E  ALPS+KLSSDSEYDNKTESDSPM NE  GN
Sbjct: 121 KVKKFKKSGCPHYDKLMRIYGDTVAA-EFHALPSSKLSSDSEYDNKTESDSPMFNEGYGN 180

Query: 181 SRDENQGQSSMSKKSKRKREVLNDIMSSFKEAYVENLKRRNDILEGRLVGFPSGEFSEIS 240
           +RDEN GQSSMSKKSKRKREV+NDIMSSFKEAY+ENLKRRND+LEGR +GF S + +E S
Sbjct: 181 NRDENHGQSSMSKKSKRKREVINDIMSSFKEAYIENLKRRNDLLEGRPLGFSSVDVNETS 240

Query: 241 SKERDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFVNN 300
           S  RDY DEDLNKC KILNSMVDIDDKAYTK+LKQLVADTTWRKAFLCIPESRR+GF+NN
Sbjct: 241 SIARDYGDEDLNKCFKILNSMVDIDDKAYTKILKQLVADTTWRKAFLCIPESRRKGFINN 299

[Close]

BLAST of Cucsat.G12725.T23 vs. ExPASy TrEMBL
Match: A0A1S4DUG7 (L10-interacting MYB domain-containing protein-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487000 PE=4 SV=1)

HSP 1 Score: 575 bits (1482), Expect = 9.18e-207
Identity = 287/301 (95.35%), Postives = 292/301 (97.01%), Query Frame = 0


Query: 1   MKINHIEDVNQIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLY 60
           MKIN IEDV+QIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLY
Sbjct: 1   MKINRIEDVHQIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLY 60

Query: 61  VKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKVNK 120
           VKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKVNK
Sbjct: 61  VKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKVNK 120

Query: 121 KAKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTESDSPMSNEDCGN 180
            AKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTESD+PMSNED GN
Sbjct: 121 NAKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTESDAPMSNEDYGN 180

Query: 181 SRDENQGQSSMSKKSKRKREVLNDIMSSFKEAYVENLKRRNDILEGRLVGFPSGEFSEIS 240
           +RDEN GQSSMSKKSKRKRE++NDIMSSFKEAYVENLKRRNDILEGRL G  SGEFSE S
Sbjct: 181 NRDENHGQSSMSKKSKRKREIINDIMSSFKEAYVENLKRRNDILEGRLFGLSSGEFSETS 240

Query: 241 SKERDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFVNN 300
           SK RDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFVNN
Sbjct: 241 SKARDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFVNN 300

[Close]

BLAST of Cucsat.G12725.T23 vs. ExPASy TrEMBL
Match: A0A1S3B8P1 (uncharacterized protein LOC103487000 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487000 PE=4 SV=1)

HSP 1 Score: 575 bits (1482), Expect = 2.40e-206
Identity = 287/301 (95.35%), Postives = 292/301 (97.01%), Query Frame = 0


Query: 1   MKINHIEDVNQIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLY 60
           MKIN IEDV+QIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLY
Sbjct: 27  MKINRIEDVHQIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLY 86

Query: 61  VKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKVNK 120
           VKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKVNK
Sbjct: 87  VKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKVNK 146

Query: 121 KAKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTESDSPMSNEDCGN 180
            AKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTESD+PMSNED GN
Sbjct: 147 NAKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTESDAPMSNEDYGN 206

Query: 181 SRDENQGQSSMSKKSKRKREVLNDIMSSFKEAYVENLKRRNDILEGRLVGFPSGEFSEIS 240
           +RDEN GQSSMSKKSKRKRE++NDIMSSFKEAYVENLKRRNDILEGRL G  SGEFSE S
Sbjct: 207 NRDENHGQSSMSKKSKRKREIINDIMSSFKEAYVENLKRRNDILEGRLFGLSSGEFSETS 266

Query: 241 SKERDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFVNN 300
           SK RDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFVNN
Sbjct: 267 SKARDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFVNN 326

[Close]

BLAST of Cucsat.G12725.T23 vs. ExPASy TrEMBL
Match: A0A5A7UDA1 (L10-interacting MYB domain-containing protein-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007990 PE=4 SV=1)

HSP 1 Score: 380 bits (977), Expect = 5.62e-131
Identity = 192/204 (94.12%), Postives = 196/204 (96.08%), Query Frame = 0


Query: 98  WDPVLGTITLGEAQWTNLIKVNKKAKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKL 157
           WDPVLGTITLGEAQWTNLIKVNK AKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKL
Sbjct: 26  WDPVLGTITLGEAQWTNLIKVNKNAKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKL 85

Query: 158 SSDSEYDNKTESDSPMSNEDCGNSRDENQGQSSMSKKSKRKREVLNDIMSSFKEAYVENL 217
           SSDSEYDNKTESD+PMSNED GN+RDEN GQSSMSKKSKRKRE++NDIMSSFKEAYVENL
Sbjct: 86  SSDSEYDNKTESDAPMSNEDYGNNRDENHGQSSMSKKSKRKREIINDIMSSFKEAYVENL 145

Query: 218 KRRNDILEGRLVGFPSGEFSEISSKERDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLV 277
           KRRNDILEGRL G  SGEFSE SSK RDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLV
Sbjct: 146 KRRNDILEGRLFGLSSGEFSETSSKARDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLV 205

Query: 278 ADTTWRKAFLCIPESRRRGFVNNL 301
           ADTTWRKAFLCIPESRRRGFVNNL
Sbjct: 206 ADTTWRKAFLCIPESRRRGFVNNL 229

[Close]

BLAST of Cucsat.G12725.T23 vs. ExPASy TrEMBL
Match: A0A0A0LHR1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G825110 PE=4 SV=1)

HSP 1 Score: 251 bits (640), Expect = 2.96e-81
Identity = 128/129 (99.22%), Postives = 128/129 (99.22%), Query Frame = 0


Query: 173 MSNEDCGNSRDENQGQSSMSKKSKRKREVLNDIMSSFKEAYVENLKRRNDILEGRLVGFP 232
           MSNEDCGNSRDENQGQSSMSKKSKRKREVLNDIMSSFKEAYVENLKRRNDILEGRL GFP
Sbjct: 1   MSNEDCGNSRDENQGQSSMSKKSKRKREVLNDIMSSFKEAYVENLKRRNDILEGRLFGFP 60

Query: 233 SGEFSEISSKERDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPES 292
           SGEFSEISSKERDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPES
Sbjct: 61  SGEFSEISSKERDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPES 120

Query: 293 RRRGFVNNL 301
           RRRGFVNNL
Sbjct: 121 RRRGFVNNL 129

[Close]

BLAST of Cucsat.G12725.T23 vs. ExPASy TrEMBL
Match: A0A1S3CFA7 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo OX=3656 GN=LOC103500275 PE=4 SV=1)

HSP 1 Score: 192 bits (489), Expect = 8.66e-57
Identity = 118/294 (40.14%), Postives = 161/294 (54.76%), Query Frame = 0


Query: 12  IDVSRFDGP--WSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLYVKTGYAYSH 71
           +D+    G   WS K+E +F++LM++EVAKGNRPTTTFTKTSW Y++ +L   TGY YSH
Sbjct: 3   VDIDGLKGERLWSNKSEALFVDLMDEEVAKGNRPTTTFTKTSWNYMRSELNANTGYNYSH 62

Query: 72  EQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKVNKKAKKFKKSG 131
           +QLKNK+N LR   K FKK+LSD+ G GWDP+ G I                        
Sbjct: 63  DQLKNKFNKLRKICKAFKKILSDMTGNGWDPLFGVI------------------------ 122

Query: 132 CPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTESDSPMSNEDCGNSRDENQGQS 191
                                A PST+L SD E +N+ +      N   G   + ++G+S
Sbjct: 123 ---------------------ACPSTRLISDFEDENEND---VARNTKIG-VEENDKGKS 182

Query: 192 SMSKKSKRKREVLNDIMSSFKEAYVENLKRRNDILEGRLVGFPSGEF--SEISSKERDYA 251
              K+ +R R+  +   S F   Y EN  R NDILE R  G  S E   S+ SSK+ D  
Sbjct: 183 K--KRVRRNRDEFDSFFSPFLNIYAENAMRNNDILEKRSFGCTSSEVDESQTSSKKDDDL 242

Query: 252 DEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFVNNL 301
            E+L +C+ IL++M D+D   Y+K+LK L  D  WRK FL +P+SR+R F+N+L
Sbjct: 243 HEELMECLDILHTMEDVDGDTYSKILKLLHRDLDWRKLFLRMPDSRKRDFINSL 245

The following BLAST results are available for this feature:

BLAST of Cucsat.G12725.T23 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFJ8	2.0e-12	27.53	L10-interacting MYB domain-containing protein OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Cucsat.G12725.T23 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031738598.1	8.16e-217	99.67	L10-interacting MYB domain-containing protein [Cucumis sativus]	[more]
KAE8651219.1	2.15e-216	99.67	hypothetical protein Csa_000986 [Cucumis sativus]	[more]
XP_016899632.1	1.90e-206	95.35	PREDICTED: L10-interacting MYB domain-containing protein-like isoform X2 [Cucumi...	[more]
XP_008443406.1	4.96e-206	95.35	PREDICTED: uncharacterized protein LOC103487000 isoform X1 [Cucumis melo]	[more]
XP_038904554.1	2.55e-181	84.67	L10-interacting MYB domain-containing protein-like isoform X3 [Benincasa hispida...	[more]

BLAST of Cucsat.G12725.T23 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DUG7	9.18e-207	95.35	L10-interacting MYB domain-containing protein-like isoform X2 OS=Cucumis melo OX...	[more]
A0A1S3B8P1	2.40e-206	95.35	uncharacterized protein LOC103487000 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7UDA1	5.62e-131	94.12	L10-interacting MYB domain-containing protein-like isoform X2 OS=Cucumis melo va...	[more]
A0A0A0LHR1	2.96e-81	99.22	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G825110 PE=4 SV=1	[more]
A0A1S3CFA7	8.66e-57	40.14	L10-interacting MYB domain-containing protein-like OS=Cucumis melo OX=3656 GN=LO...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 69..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 155..198
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 172..188
None	No IPR available	PANTHER	PTHR47584	FAMILY NOT NAMED	coord: 7..300
None	No IPR available	PANTHER	PTHR47584:SF3	L10-INTERACTING MYB DOMAIN-CONTAINING PROTEIN-LIKE	coord: 7..300
IPR024752	Myb/SANT-like domain	PFAM	PF12776	Myb_DNA-bind_3	coord: 21..114 e-value: 5.0E-17 score: 62.7

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G12725	Cucsat.G12725	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G12725.T23.E1	Cucsat.G12725.T23.E1	exon
Cucsat.G12725.T23.E2	Cucsat.G12725.T23.E2	exon
Cucsat.G12725.T23.E3	Cucsat.G12725.T23.E3	exon
Cucsat.G12725.T23.E4	Cucsat.G12725.T23.E4	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G12725.T23.C2	Cucsat.G12725.T23.C2	CDS
Cucsat.G12725.T23.C1	Cucsat.G12725.T23.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G12725.T23	Cucsat.G12725.T23-protein	polypeptide