Cucsat.G12725.T19 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G12725.T19
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	L10-interacting MYB domain-containing protein-like isoform X2
Location	ctg1838: 3081957 .. 3085305 (-)
RNA-Seq Expression	Cucsat.G12725.T19
Synteny	Cucsat.G12725.T19

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTCGCTCCTCTTCCTACTCAAGGTTTTTCAATCTTATTTTACTCTTTACTTTACTTTGTTCTTGTTTTTAGTTTTGATTGTTTCAATTCGATTGTATTCTATAGCATCAATTTCTTCATATGTAATCTCAATGCAGTTTGCTTTGTCCTGTTCCTTTTCATCTTTTTCTTCCTCGCATTATAGCTGACTAGTGGTTTGTTCTTTAACTGGAGATTTGATTCTACTGTTGGCTTAAGTAATTGGTTTGCCAATGTCAATTGCTCTGCTGCAAAACAGGGCATGATTGAACTCCATTGTTGTTGCATTGAACAATGTCATTTGGGATTTTGGGCTGTGACTCCACACTTATATCTTTTAGGAGGAGCTTCTTCCATTTGTCATTGGATCTTGATCATCTTTCGATTGTGGGTTCTGATTCATAATCGTACTCATCTCTATCATCTTTCACTTCCATAACAGATTTTTCGACACTTCTCAATACATCATCATCAAATTCGGTTTCTTCTTCCACATTTTCATGGGGTAGAGACAGTTCTTCAGCTGAAGCATTCATCAGTCTTACTCTTCTTCAAAATCTTCTTCAATTGTATTTTCCAATTCACAAGTAGACTCATTTTGTTTAGATCCAACTTCCCTACCAGATTCTTTTACAATGCTCCTTTTGTGAACAACTACTTCAGTTGGCAGAGAAAATCAATTTCCTCAGCAGAAATCTTCACAAAAGCATCATCTTGGCAAGCTTCATTTGCTTCTTCATCTTCAGAGAAGCATGTCACATCCAAATTAGCATGTGGTGCCTCTATTTCAGTATGATCACCACTCTTATCTCTAACTAGATTTTCTTCAGAAGATTTCAAGGGATCATCAAGAACCATTTCTCTGGTTTCAGACTTCATCTCATTCTTCTCTCGTTCATCAACTTCGATGTCCAAATCTTCATTTAATTTTCTTTCTGGTTCATTGGTTTTCTTTGACGCAGTTTCTAATTCTGCATCCTTCTTCACGGGTCCTGAACAGTTAGGCATATCATCGAACGAAATATGGATAGTAATTGACTCCATTCTCCCCTTTTCCCCTAAACTCAATCTCTCCATGTTCTTGTCCAACAATCTGACGGACCTCCTTGTACTGCAATCTTGCTGCTCTACAGCTTCATTGTTCTGAGTCTTGGTTTGTTTACAGGTTAAGGCCCCCACAACACTACTGGCTTTTAGGCACAGCTGACGTTTTTCTATTTGCATTATTTTCTTGATCCCGATCATTGTTCTTTTACTGATCATCAACCATCATCTGAAAATCCACTTTCTTGCAAGCTGAAGAAGCTGCCACTGTCCTTCTCCAGCCACCTGGAAAGGACAGAGTAGTCGAAGCCACAATTAGATCTCTGTTTTCTGATTCCCTTGTGTCTCTTGCTTCTGCAGCAGAACGTGTTTGAGTAGTAATTGCAGTAGTAATTGTCTCATCTTCGACTATGACATCCTTTCTTCTTGTCAAAGATATCAATGCAGTTCAGGTATTTCCAAGGAAACCTATGCTTCCATCGGGGATTTAGGTATCCTTGATCTTTTACTGTTAAAAAATTCTTTGATTCTTTCAACGGATGGAAGAGTGTCAGCCATGATGACATTAGTGATATTGGCCGGAATCTTATTCCTCTTGCAGAGTGCTTGGTGCTCTCTTCTTGACAAGGTATTGAAATCCATGGCTGTAGGAAGATAAAGTTTTGTATGGATTGAAGAAATTTTGCACTGCCACAGGAAATGAGGGGATTCCAATTGGAGTTTGGGGACTTGAACCACAGATCGTGGTCGCTAATACACTTGGATGTTAGTTGAGCTATGCTCGCTTTGGCATGTCTTATGATTTCTTAGATGTTTGCTTTCTTTGATCTTGGATGGACCATTATTATCTCTCTTAAATTTTCTGTCAGTAAACTTAGATCTCTTAGTATGGCTATCATATATCTCTTCAAGTTGGAGGTTCAAAACTTCGTACCTTGCTTTATTCGGAAAATTTTTTTGTTAGTAATTGAAACTACTAAGTTTTCTCCCTTCAAAAGTCCTCTTGGTCGTTTGCATCCTGTATGTTAAAATAATTCTAACAGTTCGCAGACAAAGATTATTTCTTATTCTCAATCAAATTTAGGTGGGCGCCTCTATAAATATGTTCCTTTATGCAACCGTTTATATAGATGAAGATACTAAAGTAAGATTGTTATTTTCAGGATTCATGAAGATCAATCATATTGAAGATGTTAATCAAATTGATGTATCAAGATTTGATGGGCCTTGGTCATTTAAAAATGAGACAATTTTTATCAATTTGATGGAAGATGAAGTTGCAAAAGGAAATCGTCCAACTACAACCTTTACCAAAACTAGTTGGACTTATATAAAGGAACAACTGTATGTAAAAACAGGATATGCTTATTCTCATGAACAATTGAAAAATAAGTATAACAGTCTTAGACATCGTTACAAAGAATTCAAAAAGTTGTTGAGTGATATTAATGGAAAAGGTTGGGATCCTGTATTGGGAACTATTACTTTAGGAGAGGCGCAGTGGACTAATCTCATTAAGGTACTGTTTCAATTACTGTTATTTAATCTTTGTCATTACTCTATGATAAAATAATTTTACCAAGAGCTATAAGTTGGTAAAATTTTGTAGGTTAACAAGAAAGCTAAGAAGTTCAAAAAGAGTGGATGTCCACATTACGGAAAATTGATGGGAATATATGGAGATACAATTGCAACAACAGAGCTTGATGCTCTTCCATCTACAAAACTTTCTTCAGATTCTGAATATGATAATAAAACAGAAAGTGATTCTCCGATGAGCAATGAAGATTGTGGAAATAGTAGAGATGAAAATCAAGGTCAAAGTAGTATGAGCAAGAAATCTAAAAGAAAAAGAGAAGTCCTAAATGATATAATGTCATCTTTCAAGGAAGCTTATGTTGAGAATTTAAAGAGGAGAAATGATATACTTGAAGGAAGACTTGTTGGTTTTCCATCAGGTGAATTTAGCGAAATTTCGTCAAAAGAAAGAGATTATGCTGATGAAGACTTAAACAAATGCATCAAAATTTTAAATAGCATGGTCGATATTGATGATAAAGCCTATACAAAAGTATTGAAACAATTGGTTGCTGACACTACTTGGAGAAAAGCATTTTTGTGTATTCCTGAATCAAGAAGGAGAGGATTTGTTAATAATCTTTAATTATTTAACTAACTAATTAGGTTAGATGATGGTTTGTACAATTTTATATAGTTTTAGAAAAAGAAAAACTTATACTTTAACTACTTGTTAAATGTTTTTGGGTTTTATAGTTTATATGTTAGA

Coding sequence (CDS)

ATGTTCCTTTATGCAACCGTTTATATAGATGAAGATACTAAAGTAAGATTGTTATTTTCAGGATTCATGAAGATCAATCATATTGAAGATGTTAATCAAATTGATGTATCAAGATTTGATGGGCCTTGGTCATTTAAAAATGAGACAATTTTTATCAATTTGATGGAAGATGAAGTTGCAAAAGGAAATCGTCCAACTACAACCTTTACCAAAACTAGTTGGACTTATATAAAGGAACAACTGTATGTAAAAACAGGATATGCTTATTCTCATGAACAATTGAAAAATAAGTATAACAGTCTTAGACATCGTTACAAAGAATTCAAAAAGTTGTTGAGTGATATTAATGGAAAAGGTTGGGATCCTGTATTGGGAACTATTACTTTAGGAGAGGCGCAGTGGACTAATCTCATTAAGGTTAACAAGAAAGCTAAGAAGTTCAAAAAGAGTGGATGTCCACATTACGGAAAATTGATGGGAATATATGGAGATACAATTGCAACAACAGAGCTTGATGCTCTTCCATCTACAAAACTTTCTTCAGATTCTGAATATGATAATAAAACAGAAAGTGATTCTCCGATGAGCAATGAAGATTGTGGAAATAGTAGAGATGAAAATCAAGGTCAAAGTAGTATGAGCAAGAAATCTAAAAGAAAAAGAGAAGTCCTAAATGATATAATGTCATCTTTCAAGGAAGCTTATGTTGAGAATTTAAAGAGGAGAAATGATATACTTGAAGGAAGACTTGTTGGTTTTCCATCAGGTGAATTTAGCGAAATTTCGTCAAAAGAAAGAGATTATGCTGATGAAGACTTAAACAAATGCATCAAAATTTTAAATAGCATGGTCGATATTGATGATAAAGCCTATACAAAAGTATTGAAACAATTGGTTGCTGACACTACTTGGAGAAAAGCATTTTTGTGTATTCCTGAATCAAGAAGGAGAGGATTTGTTAATAATCTTTAA

Protein sequence

MFLYATVYIDEDTKVRLLFSGFMKINHIEDVNQIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLYVKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKVNKKAKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTESDSPMSNEDCGNSRDENQGQSSMSKKSKRKREVLNDIMSSFKEAYVENLKRRNDILEGRLVGFPSGEFSEISSKERDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFVNNL

Homology

[Close]

BLAST of Cucsat.G12725.T19 vs. ExPASy Swiss-Prot
Match: Q9FFJ8 (L10-interacting MYB domain-containing protein OS=Arabidopsis thaliana OX=3702 GN=LIMYB PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 2.1e-12
Identity = 68/247 (27.53%), Postives = 115/247 (46.56%), Query Frame = 0


Query: 41  GPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLYVKTGYAYSHEQLKNKYNS 100
           G WS     +F++L+  E  KGNRP T F K  W  I   +   TG  Y+  QLKN ++ 
Sbjct: 168 GYWSPSTHKLFLDLLVQETLKGNRPDTHFNKEGWKTILGTINENTGLGYTRPQLKNHWDC 227

Query: 101 LRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKVNKKAKKFKKSGCPHYGKLMG 160
            R  +K + +L+   + K WDP   +    E +W   I+ N +A +F+    PH  +L  
Sbjct: 228 TRKAWKIWCQLVGASSMK-WDPESRSFGATEEEWRIYIRENPRAGQFRHKEVPHADQLAI 287

Query: 161 IYGDTIATTELDALPSTKLSSDSEYDNKTESDSPMSNEDCGNSRDENQGQSSMSKKSKRK 220
           I+   I   E    PS   S      N+  S+SP   +    S+  +  ++  S+++   
Sbjct: 288 IFNGVIEPGETYTPPSR--SRKKLLHNR--SESPQWRDTTPLSK-MHVDEAETSRQNGCY 347

Query: 221 REVLNDIMSSFKEAYVENLKRRNDILEGRLVGFPSGEFSEISSKERDYADEDLNKCIKIL 280
            E   D + S     ++++K  ND++        S  F EI S +  Y+   + +CIK L
Sbjct: 348 AESQEDRIDSENAQPLDDMKLMNDVMLQE-----SPVFVEIESAKPMYS---IGECIKSL 400

Query: 281 NSMVDID 288
           N++ +++
Sbjct: 408 NAIEEVE 400

[Close]

BLAST of Cucsat.G12725.T19 vs. NCBI nr
Match: KAE8651219.1 (hypothetical protein Csa_000986 [Cucumis sativus])

HSP 1 Score: 606 bits (1562), Expect = 7.74e-218
Identity = 302/303 (99.67%), Postives = 302/303 (99.67%), Query Frame = 0


Query: 21  GFMKINHIEDVNQIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQ 80
           GFMKINHIEDVNQIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQ
Sbjct: 25  GFMKINHIEDVNQIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQ 84

Query: 81  LYVKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKV 140
           LYVKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKV
Sbjct: 85  LYVKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKV 144

Query: 141 NKKAKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTESDSPMSNEDC 200
           NKKAKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTESDSPMSNEDC
Sbjct: 145 NKKAKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTESDSPMSNEDC 204

Query: 201 GNSRDENQGQSSMSKKSKRKREVLNDIMSSFKEAYVENLKRRNDILEGRLVGFPSGEFSE 260
           GNSRDENQGQSSMSKKSKRKREVLNDIMSSFKEAYVENLKRRNDILEGRL GFPSGEFSE
Sbjct: 205 GNSRDENQGQSSMSKKSKRKREVLNDIMSSFKEAYVENLKRRNDILEGRLFGFPSGEFSE 264

Query: 261 ISSKERDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFV 320
           ISSKERDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFV
Sbjct: 265 ISSKERDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFV 324

Query: 321 NNL 323
           NNL
Sbjct: 325 NNL 327

[Close]

BLAST of Cucsat.G12725.T19 vs. NCBI nr
Match: XP_031738598.1 (L10-interacting MYB domain-containing protein [Cucumis sativus])

HSP 1 Score: 601 bits (1549), Expect = 2.82e-216
Identity = 300/301 (99.67%), Postives = 300/301 (99.67%), Query Frame = 0


Query: 23  MKINHIEDVNQIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLY 82
           MKINHIEDVNQIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLY
Sbjct: 1   MKINHIEDVNQIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLY 60

Query: 83  VKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKVNK 142
           VKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKVNK
Sbjct: 61  VKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKVNK 120

Query: 143 KAKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTESDSPMSNEDCGN 202
           KAKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTESDSPMSNEDCGN
Sbjct: 121 KAKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTESDSPMSNEDCGN 180

Query: 203 SRDENQGQSSMSKKSKRKREVLNDIMSSFKEAYVENLKRRNDILEGRLVGFPSGEFSEIS 262
           SRDENQGQSSMSKKSKRKREVLNDIMSSFKEAYVENLKRRNDILEGRL GFPSGEFSEIS
Sbjct: 181 SRDENQGQSSMSKKSKRKREVLNDIMSSFKEAYVENLKRRNDILEGRLFGFPSGEFSEIS 240

Query: 263 SKERDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFVNN 322
           SKERDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFVNN
Sbjct: 241 SKERDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFVNN 300

[Close]

BLAST of Cucsat.G12725.T19 vs. NCBI nr
Match: XP_008443406.1 (PREDICTED: uncharacterized protein LOC103487000 isoform X1 [Cucumis melo])

HSP 1 Score: 580 bits (1494), Expect = 1.78e-207
Identity = 289/303 (95.38%), Postives = 294/303 (97.03%), Query Frame = 0


Query: 21  GFMKINHIEDVNQIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQ 80
           GFMKIN IEDV+QIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQ
Sbjct: 25  GFMKINRIEDVHQIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQ 84

Query: 81  LYVKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKV 140
           LYVKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKV
Sbjct: 85  LYVKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKV 144

Query: 141 NKKAKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTESDSPMSNEDC 200
           NK AKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTESD+PMSNED 
Sbjct: 145 NKNAKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTESDAPMSNEDY 204

Query: 201 GNSRDENQGQSSMSKKSKRKREVLNDIMSSFKEAYVENLKRRNDILEGRLVGFPSGEFSE 260
           GN+RDEN GQSSMSKKSKRKRE++NDIMSSFKEAYVENLKRRNDILEGRL G  SGEFSE
Sbjct: 205 GNNRDENHGQSSMSKKSKRKREIINDIMSSFKEAYVENLKRRNDILEGRLFGLSSGEFSE 264

Query: 261 ISSKERDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFV 320
            SSK RDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFV
Sbjct: 265 TSSKARDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFV 324

Query: 321 NNL 323
           NNL
Sbjct: 325 NNL 327

[Close]

BLAST of Cucsat.G12725.T19 vs. NCBI nr
Match: XP_016899632.1 (PREDICTED: L10-interacting MYB domain-containing protein-like isoform X2 [Cucumis melo])

HSP 1 Score: 575 bits (1481), Expect = 6.52e-206
Identity = 287/301 (95.35%), Postives = 292/301 (97.01%), Query Frame = 0


Query: 23  MKINHIEDVNQIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLY 82
           MKIN IEDV+QIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLY
Sbjct: 1   MKINRIEDVHQIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLY 60

Query: 83  VKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKVNK 142
           VKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKVNK
Sbjct: 61  VKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKVNK 120

Query: 143 KAKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTESDSPMSNEDCGN 202
            AKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTESD+PMSNED GN
Sbjct: 121 NAKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTESDAPMSNEDYGN 180

Query: 203 SRDENQGQSSMSKKSKRKREVLNDIMSSFKEAYVENLKRRNDILEGRLVGFPSGEFSEIS 262
           +RDEN GQSSMSKKSKRKRE++NDIMSSFKEAYVENLKRRNDILEGRL G  SGEFSE S
Sbjct: 181 NRDENHGQSSMSKKSKRKREIINDIMSSFKEAYVENLKRRNDILEGRLFGLSSGEFSETS 240

Query: 263 SKERDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFVNN 322
           SK RDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFVNN
Sbjct: 241 SKARDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFVNN 300

[Close]

BLAST of Cucsat.G12725.T19 vs. NCBI nr
Match: XP_038904553.1 (L10-interacting MYB domain-containing protein-like isoform X2 [Benincasa hispida])

HSP 1 Score: 516 bits (1330), Expect = 7.66e-183
Identity = 256/303 (84.49%), Postives = 276/303 (91.09%), Query Frame = 0


Query: 20  SGFMKINHIEDVNQIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKE 79
           +GFMK N IEDV QID S+FDGPWSFKNE+IFI+LME+EVAKGNRPTTTFTKTSWTYIKE
Sbjct: 3   AGFMKTNCIEDVTQIDASKFDGPWSFKNESIFIDLMEEEVAKGNRPTTTFTKTSWTYIKE 62

Query: 80  QLYVKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIK 139
           QLYV+TGYAY+HEQLKNKYNSLRHRYKEFK+LL DINGKGWDPVLGTITL E QWTNLIK
Sbjct: 63  QLYVRTGYAYTHEQLKNKYNSLRHRYKEFKRLLGDINGKGWDPVLGTITLEEEQWTNLIK 122

Query: 140 VNKKAKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTESDSPMSNED 199
           VNKK KKFKKSGCPHY KLM IYGDT+A  E  ALPS+KLSSDSEYDNKTESDSPM NE 
Sbjct: 123 VNKKVKKFKKSGCPHYDKLMRIYGDTVAA-EFHALPSSKLSSDSEYDNKTESDSPMFNEG 182

Query: 200 CGNSRDENQGQSSMSKKSKRKREVLNDIMSSFKEAYVENLKRRNDILEGRLVGFPSGEFS 259
            GN+RDEN GQSSMSKKSKRKREV+NDIMSSFKEAY+ENLKRRND+LEGR +GF S + +
Sbjct: 183 YGNNRDENHGQSSMSKKSKRKREVINDIMSSFKEAYIENLKRRNDLLEGRPLGFSSVDVN 242

Query: 260 EISSKERDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGF 319
           E SS  RDY DEDLNKC KILNSMVDIDDKAYTK+LKQLVADTTWRKAFLCIPESRR+GF
Sbjct: 243 ETSSIARDYGDEDLNKCFKILNSMVDIDDKAYTKILKQLVADTTWRKAFLCIPESRRKGF 302

Query: 320 VNN 322
           +NN
Sbjct: 303 INN 304

[Close]

BLAST of Cucsat.G12725.T19 vs. ExPASy TrEMBL
Match: A0A1S3B8P1 (uncharacterized protein LOC103487000 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487000 PE=4 SV=1)

HSP 1 Score: 580 bits (1494), Expect = 8.64e-208
Identity = 289/303 (95.38%), Postives = 294/303 (97.03%), Query Frame = 0


Query: 21  GFMKINHIEDVNQIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQ 80
           GFMKIN IEDV+QIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQ
Sbjct: 25  GFMKINRIEDVHQIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQ 84

Query: 81  LYVKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKV 140
           LYVKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKV
Sbjct: 85  LYVKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKV 144

Query: 141 NKKAKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTESDSPMSNEDC 200
           NK AKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTESD+PMSNED 
Sbjct: 145 NKNAKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTESDAPMSNEDY 204

Query: 201 GNSRDENQGQSSMSKKSKRKREVLNDIMSSFKEAYVENLKRRNDILEGRLVGFPSGEFSE 260
           GN+RDEN GQSSMSKKSKRKRE++NDIMSSFKEAYVENLKRRNDILEGRL G  SGEFSE
Sbjct: 205 GNNRDENHGQSSMSKKSKRKREIINDIMSSFKEAYVENLKRRNDILEGRLFGLSSGEFSE 264

Query: 261 ISSKERDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFV 320
            SSK RDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFV
Sbjct: 265 TSSKARDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFV 324

Query: 321 NNL 323
           NNL
Sbjct: 325 NNL 327

[Close]

BLAST of Cucsat.G12725.T19 vs. ExPASy TrEMBL
Match: A0A1S4DUG7 (L10-interacting MYB domain-containing protein-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487000 PE=4 SV=1)

HSP 1 Score: 575 bits (1481), Expect = 3.16e-206
Identity = 287/301 (95.35%), Postives = 292/301 (97.01%), Query Frame = 0


Query: 23  MKINHIEDVNQIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLY 82
           MKIN IEDV+QIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLY
Sbjct: 1   MKINRIEDVHQIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLY 60

Query: 83  VKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKVNK 142
           VKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKVNK
Sbjct: 61  VKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKVNK 120

Query: 143 KAKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTESDSPMSNEDCGN 202
            AKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTESD+PMSNED GN
Sbjct: 121 NAKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTESDAPMSNEDYGN 180

Query: 203 SRDENQGQSSMSKKSKRKREVLNDIMSSFKEAYVENLKRRNDILEGRLVGFPSGEFSEIS 262
           +RDEN GQSSMSKKSKRKRE++NDIMSSFKEAYVENLKRRNDILEGRL G  SGEFSE S
Sbjct: 181 NRDENHGQSSMSKKSKRKREIINDIMSSFKEAYVENLKRRNDILEGRLFGLSSGEFSETS 240

Query: 263 SKERDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFVNN 322
           SK RDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFVNN
Sbjct: 241 SKARDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFVNN 300

[Close]

BLAST of Cucsat.G12725.T19 vs. ExPASy TrEMBL
Match: A0A5A7UDA1 (L10-interacting MYB domain-containing protein-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007990 PE=4 SV=1)

HSP 1 Score: 380 bits (977), Expect = 1.29e-130
Identity = 192/204 (94.12%), Postives = 196/204 (96.08%), Query Frame = 0


Query: 120 WDPVLGTITLGEAQWTNLIKVNKKAKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKL 179
           WDPVLGTITLGEAQWTNLIKVNK AKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKL
Sbjct: 26  WDPVLGTITLGEAQWTNLIKVNKNAKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKL 85

Query: 180 SSDSEYDNKTESDSPMSNEDCGNSRDENQGQSSMSKKSKRKREVLNDIMSSFKEAYVENL 239
           SSDSEYDNKTESD+PMSNED GN+RDEN GQSSMSKKSKRKRE++NDIMSSFKEAYVENL
Sbjct: 86  SSDSEYDNKTESDAPMSNEDYGNNRDENHGQSSMSKKSKRKREIINDIMSSFKEAYVENL 145

Query: 240 KRRNDILEGRLVGFPSGEFSEISSKERDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLV 299
           KRRNDILEGRL G  SGEFSE SSK RDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLV
Sbjct: 146 KRRNDILEGRLFGLSSGEFSETSSKARDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLV 205

Query: 300 ADTTWRKAFLCIPESRRRGFVNNL 323
           ADTTWRKAFLCIPESRRRGFVNNL
Sbjct: 206 ADTTWRKAFLCIPESRRRGFVNNL 229

[Close]

BLAST of Cucsat.G12725.T19 vs. ExPASy TrEMBL
Match: A0A0A0LHR1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G825110 PE=4 SV=1)

HSP 1 Score: 251 bits (640), Expect = 6.30e-81
Identity = 128/129 (99.22%), Postives = 128/129 (99.22%), Query Frame = 0


Query: 195 MSNEDCGNSRDENQGQSSMSKKSKRKREVLNDIMSSFKEAYVENLKRRNDILEGRLVGFP 254
           MSNEDCGNSRDENQGQSSMSKKSKRKREVLNDIMSSFKEAYVENLKRRNDILEGRL GFP
Sbjct: 1   MSNEDCGNSRDENQGQSSMSKKSKRKREVLNDIMSSFKEAYVENLKRRNDILEGRLFGFP 60

Query: 255 SGEFSEISSKERDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPES 314
           SGEFSEISSKERDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPES
Sbjct: 61  SGEFSEISSKERDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPES 120

Query: 315 RRRGFVNNL 323
           RRRGFVNNL
Sbjct: 121 RRRGFVNNL 129

[Close]

BLAST of Cucsat.G12725.T19 vs. ExPASy TrEMBL
Match: A0A1S3CFA7 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo OX=3656 GN=LOC103500275 PE=4 SV=1)

HSP 1 Score: 192 bits (488), Expect = 2.43e-56
Identity = 118/294 (40.14%), Postives = 161/294 (54.76%), Query Frame = 0


Query: 34  IDVSRFDGP--WSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLYVKTGYAYSH 93
           +D+    G   WS K+E +F++LM++EVAKGNRPTTTFTKTSW Y++ +L   TGY YSH
Sbjct: 3   VDIDGLKGERLWSNKSEALFVDLMDEEVAKGNRPTTTFTKTSWNYMRSELNANTGYNYSH 62

Query: 94  EQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKVNKKAKKFKKSG 153
           +QLKNK+N LR   K FKK+LSD+ G GWDP+ G I                        
Sbjct: 63  DQLKNKFNKLRKICKAFKKILSDMTGNGWDPLFGVI------------------------ 122

Query: 154 CPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTESDSPMSNEDCGNSRDENQGQS 213
                                A PST+L SD E +N+ +      N   G   + ++G+S
Sbjct: 123 ---------------------ACPSTRLISDFEDENEND---VARNTKIG-VEENDKGKS 182

Query: 214 SMSKKSKRKREVLNDIMSSFKEAYVENLKRRNDILEGRLVGFPSGEF--SEISSKERDYA 273
              K+ +R R+  +   S F   Y EN  R NDILE R  G  S E   S+ SSK+ D  
Sbjct: 183 K--KRVRRNRDEFDSFFSPFLNIYAENAMRNNDILEKRSFGCTSSEVDESQTSSKKDDDL 242

Query: 274 DEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFVNNL 323
            E+L +C+ IL++M D+D   Y+K+LK L  D  WRK FL +P+SR+R F+N+L
Sbjct: 243 HEELMECLDILHTMEDVDGDTYSKILKLLHRDLDWRKLFLRMPDSRKRDFINSL 245

The following BLAST results are available for this feature:

BLAST of Cucsat.G12725.T19 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFJ8	2.1e-12	27.53	L10-interacting MYB domain-containing protein OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Cucsat.G12725.T19 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8651219.1	7.74e-218	99.67	hypothetical protein Csa_000986 [Cucumis sativus]	[more]
XP_031738598.1	2.82e-216	99.67	L10-interacting MYB domain-containing protein [Cucumis sativus]	[more]
XP_008443406.1	1.78e-207	95.38	PREDICTED: uncharacterized protein LOC103487000 isoform X1 [Cucumis melo]	[more]
XP_016899632.1	6.52e-206	95.35	PREDICTED: L10-interacting MYB domain-containing protein-like isoform X2 [Cucumi...	[more]
XP_038904553.1	7.66e-183	84.49	L10-interacting MYB domain-containing protein-like isoform X2 [Benincasa hispida...	[more]

BLAST of Cucsat.G12725.T19 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B8P1	8.64e-208	95.38	uncharacterized protein LOC103487000 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S4DUG7	3.16e-206	95.35	L10-interacting MYB domain-containing protein-like isoform X2 OS=Cucumis melo OX...	[more]
A0A5A7UDA1	1.29e-130	94.12	L10-interacting MYB domain-containing protein-like isoform X2 OS=Cucumis melo va...	[more]
A0A0A0LHR1	6.30e-81	99.22	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G825110 PE=4 SV=1	[more]
A0A1S3CFA7	2.43e-56	40.14	L10-interacting MYB domain-containing protein-like OS=Cucumis melo OX=3656 GN=LO...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 91..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..220
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 194..210
None	No IPR available	PANTHER	PTHR47584:SF3	L10-INTERACTING MYB DOMAIN-CONTAINING PROTEIN-LIKE	coord: 29..322
None	No IPR available	PANTHER	PTHR47584	FAMILY NOT NAMED	coord: 29..322
IPR024752	Myb/SANT-like domain	PFAM	PF12776	Myb_DNA-bind_3	coord: 43..136 e-value: 5.7E-17 score: 62.5

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G12725	Cucsat.G12725	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G12725.T19.E1	Cucsat.G12725.T19.E1	exon
Cucsat.G12725.T19.E2	Cucsat.G12725.T19.E2	exon
Cucsat.G12725.T19.E3	Cucsat.G12725.T19.E3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G12725.T19.C2	Cucsat.G12725.T19.C2	CDS
Cucsat.G12725.T19.C1	Cucsat.G12725.T19.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G12725.T19	Cucsat.G12725.T19-protein	polypeptide