Cucsat.G11980.T14 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GCAAAAGTTTGATTATATTAATTAAATATCGTTAAAGGTCGTTAATTCAGGTATTAGGAATCAAATTTGAAGAAGGCGTTTTTTTTTCCTTCATAATTTTTTATATTTTTTTTTATCTTTTTTTGTGGCAGCCACTACAGTTTGAAAATCGAAATTCAAAGGCCATGGCTGAAATCCAGCAAAAGTAATGGCGGCTAGCTTCACCCTCTTGCTTCCTTTGCGTAATTATATATTTATCGACTCTAATCTGCAAGTGGGTATTTGTTTATTTCAGTCAATCGCGATTCTCGATACTTCCTATTCATCGCCCTCTTAGGAGGAAGATGATGAAGAACTGAACTGTTCAACTTGACCCTTTTGATTTTTCTTCTCTTTTTTACAAAATTGGGCGGTCGTAACGAATGGAGATTTGTCTTCCTTTCTGTTGGGGTTCGGGATTTCTTTTGTCTTTGATCAACATCGATTCTTTCCTCCATTAATGGTTTTTGACCTCCAAACTGACACTGTTAATAACTTTATCAGTTCTTCAGTTTCCTTTTTTCGTATTTTGGGCTTCTTTTGGTGGGGTTTGGGTTCTTTTGATTCTGATATGCTTTATGTTTAAAGGGTTTGAATATTTTTTCTTTCTTTTGTCGGTGGATTTTGGAAAATTCGTGGTATCAGAAACTTTCTGGTGAGGGGAAATTTTAGGGGGGGTTTGTTGTAATAGTGGGTGGGTGAGCCTTTTTGGTTTGAATTCACGGGAGAAATGGTTTGTCACGAGAAAGTGTGTTGAAGCCTAGAGGGTAAAGCTTAAATTTCTCAACTGCTTTTGAGAGATTGCAAATTTTGTGTTCATCCTCTTAGTTTTTCAATTAGATAGCTGTTCTTCAGCATTTGAAAAATTGTTCAAACTTCTCCTACTAGAAAAGGGAAAAGGGGAGAAAACAGAGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTTCTATTTGTTTTTCCTTTATTAATTTCCTCGTTGTGTTTTTGAAATGGATCGTTCTGGGGAAGCCAGTAACCAGAAACCAGCAGTTGAAGTTGCCAAAGACAAGAATGGTGTGGAACAAGTGCTGCTTCGGAACTCTCGAGGAGCTTCAGCAAGGGTATATCACATCCCCTTTCTTCATTCATACAATACAACATCGCATTCTATGTTCAATTATAAATTTAATATTGTATTTGGACCATTTCATCTATTTAGTCCTTAATGATTAGGAAGTTTTGATTATGTTACTAAACTTTGTATAGGTTTCATTTAATCAATATCGTTAAGGTTATTGATGAAACACAATTGTAGCATGACCATTATCTAAATTATGACTAAGTTGCTGTGATGTGGTATATAGTAACAGATCGGCTTTCTGATTCTATGTATATGATTGGGATGTTATTTACATGGCCTCTTTATGATGTTGGGAATTTGAAAGACATACTTTTCCCTTTTTTTTTATCAAGGCAAAATGGTATCCCTTGAAACCTTCACATTAGATCATCAAGTGTAATGTAGGGCATCCAATGAAATTAATCAGATCATAATCATGTAGATCCTGTTTGATAACCATTTGATATTTTATCTTTGGTTTTTTAAAATTAAGCTTATAGACATTAGTTCTACCTTTTGGTTTCTTTGATTGTTACCTACGTTTTAGAAAACAAAGTTGAGTTTTGAAATCCAAAAAAAAAATAGTTTTCAAATACTTGTTTTTGTTAGAATCTGACTAAGAAGAATGTGGTATGATGGTATGATGAAAAGCAGGGTAAAGAAGTAGTAAGAAAATAAACATAATTTTCAAAAAAATCAAAACTAAAAATAAAATTGTTATCAAATAGGATGAAATTCTTTAATTTTGTATGGTAATGTTTTTGTTTCTTGTTATCTAAAATTATACTCAATCATATACTCTGAGAGTTTAAAAAACCTTTTTAAATCATACATGAATTTCACGAAGGGGTAGTTTTTAGAAACTTGATTTTGGTTTTGAAACTTGGCTAATATCTTTTGCAATCTGAAAAATTAAATAAAAGAGACGTAGGTGGTACTAGTATAATCTAATCTATAAATTTCATTTTTTTTTTAATTTAAGAAAACCCCAGAAAATAAATTACAACATCACTACCACACAAAATATTAGACGTAATAACTGTTCTTCTTCTTGACGTTTCTCTTTTGTTGTATCAACAATCCAGGTTAGCTTGCATGGAGGCCAAGTTCTGTCTTGGAAAACGGAAAAAGGTGAAGAATTATTGTTTACCAGTTCTAAGGTAATCTCATCTTCTAGTTATTCAATTAGCCAAAGCTAAAGCAGAAACAAAAGCGCCTTTAGAATACTACTCTACTCTTTGTAGAACTATTCTCTGTTTATCAAAACTAGAGTTTGAATTGTATTGGTAAAATGCAAATGATAGTTTTGAAGCATAAGATAGCATAAGTTGTATGTTCATCTCCATTTCTTGTTTCAGTGTCAATTGTTTATCTGCTCAGGTTTCATTTGATGTCTTAGATTAACCATTTTGGATTTTCCTAATTATTCTGGGCCAGTCTCGATTCTCACAATTGCAAACATGAATTATGCAAAAAATGAATAAAAAATTAAACGCTCAACCATTTCCTTTCTTCTCCGCTGTAGGCAATTTTTAAGCCACCAAAAGCTGTGAGAGGAGGAATTCCAATTTGTTTTCCGCAGGTGTGTAGTGCTTATCTATGAAGATAATTCTCTGCCGTCATATGTTTCATATGACCTAATGTAACCAGTTTTGGAGATTTGTTTTTGGTGCTGTTTGTGGCGTTTGTATATTGATTTGTTTCGTTATGTATCTAGTTTGGGGCTCGTGGAAACCTTGAGCAGCATGGGTTTGCTCGTAACAAGATTTGGAAAATCGATGATAATCCTCCTCCTCTTAATCGAGGTGAAATCAAGGACAAATCCTGCATCGATTTGCTTCTTAAACCTTCTGAAGATGATCTGAAAATATGGCCACATAGGTTAGAAATGAATTGATTGTCTTCTTCATCTTCTAACTAAAACGAAGGAAGCACAATACTATTATTCAAACTCAGAAACGTTCTAATTTTACATATACAGCTAGAAAGATGATCAATTCTGATTCTCAACAATCTTTCAACCTATTATTCAGATTGTGAAGATAAAGAATTTCAACGTCTTCTTAGTTTAATTGATAACAACCCTTTTTTCCTCCCAACAGTTTTGAATTCAGACTGAAGGTCTGTTTGGCAGCAGATGGGAATCTCATATTAATATCACGAATTCGGAATATCAATTGCAAGCCTTTCAGTTTCTCAATTGCATTCCACACATACTTCTCCATTTCTGATATCAGGTATATATGATTTGCTTATAAAAGGAGGATAATCAAGGAATATACATACAATTGCAGTCGTTCCTTACAGTTTCTTTTTGTGCTTTGTTATCAAAGTGCATACTTTCATTGATGGTTTCTGCAATTCTTACTTTGCCTTCTGCCCTTTGACTATATACTATACTTACAGTGAAGTAAGAGTTGAGGGGCTTGAGGTTCTTGACTATCTCGACAACTTGCACGATAAACAACGTTTCACTGAGCAAGGAGATGCCTTAACATTTGAATCCGAGGTAAAAGTTAATTACTGAAATTGTGCTGAAGTTCCATTCATATAAACTCCAGGTTGATATTGGTTGTATGACTTGTGTCACTGCCAAGTAGGGGTAGATTCAAAAGTCATATCCTCATTAACTATTCTTTTGCCTGACAGATTGATCGAGTTTATCTTAGTTCTTCAGATCTCATCGCGGTGCTTGATCATGAACGAAAGCGCACTTTTGTTGTGAGAAGGGAAGGACTACCAGATGTTGGTAAATTATCAATCCCCTCTGATTTTAAGCATCCATGTGTAATTTAGAAAACTCAATGGACAATCTACATAATAGCTCGACTTCATTTGTAAAGTGATCGAGAACCTACCTAATAGACAATAGTAGTGAATTCTGTTAATCCAACTGCATCAGATAATGGTTTATTGTTAGTGTGAAGATGAAGGTACAAGTAATTGCCTTCAACCGGATCAGAACATACTAGAATGGAATTCGATTCACTTCCGTATGTTTAAAGATTACGAAGCGAAGCAGTGTCAGTGATAACGAAATGCCTGTTTGAATTTGGATGCAGTGGTGTGGAATCCATGGGAGAAGAAAGCAAAATCGATTGTGGATCTTGGGGATGAAGATTACAAACAGATGCTTTGTGTTGATGGAGCTGCAGTTGAGAAACCTATTACCTTGAAACCAGGTGAGGAATGGACTGGGCGCTTAGAACTATCCGTTATCCCCTCAAGTTAATGACAATGGAATAACATGGTGGGGATTTCAGATAAAGCCATTGAAGTTTTATAAATGGGGTATATGGTAAAGTATTTTTGTGTTTTGTTCTAACCAAATTGTTGTTAAAGAGTAAATAACTGAACAATCATACTAGTTTGATTTGTTGTTGATAATAGATTCTCCTTTAATGAAAGTGGAGATGTTCTTTTATTAGCCTCCCTTCAGCTATATATTTTCATTGTATATCAAATATCAACTTCTTACTGTTTACATTTTTCTTCTATA ATGGATCGTTCTGGGGAAGCCAGTAACCAGAAACCAGCAGTTGAAGTTGCCAAAGACAAGAATGGTGTGGAACAAGTGCTGCTTCGGAACTCTCGAGGAGCTTCAGCAAGGGTTAGCTTGCATGGAGGCCAAGTTCTGTCTTGGAAAACGGAAAAAGGTGAAGAATTATTGTTTACCAGTTCTAAGGCAATTTTTAAGCCACCAAAAGCTGTGAGAGGAGGAATTCCAATTTGTTTTCCGCAGTTTGGGGCTCGTGGAAACCTTGAGCAGCATGGGTTTGCTCGTAACAAGATTTGGAAAATCGATGATAATCCTCCTCCTCTTAATCGAGGTGAAATCAAGGACAAATCCTGCATCGATTTGCTTCTTAAACCTTCTGAAGATGATCTGAAAATATGGCCACATAGTTTTGAATTCAGACTGAAGGTCTGTTTGGCAGCAGATGGGAATCTCATATTAATATCACGAATTCGGAATATCAATTGCAAGCCTTTCAGTTTCTCAATTGCATTCCACACATACTTCTCCATTTCTGATATCAGTGAAGTAAGAGTTGAGGGGCTTGAGGTTCTTGACTATCTCGACAACTTGCACGATAAACAACGTTTCACTGAGCAAGGAGATGCCTTAACATTTGAATCCGAGATTGATCGAGTTTATCTTAGTTCTTCAGATCTCATCGCGGTGCTTGATCATGAACGAAAGCGCACTTTTGTTGTGAGAAGGGAAGGACTACCAGATGTTGGTAAATTATCAATCCCCTCTGATTTTAAGCATCCATGTGTAATTTAG MDRSGEASNQKPAVEVAKDKNGVEQVLLRNSRGASARVSLHGGQVLSWKTEKGEELLFTSSKAIFKPPKAVRGGIPICFPQFGARGNLEQHGFARNKIWKIDDNPPPLNRGEIKDKSCIDLLLKPSEDDLKIWPHSFEFRLKVCLAADGNLILISRIRNINCKPFSFSIAFHTYFSISDISEVRVEGLEVLDYLDNLHDKQRFTEQGDALTFESEIDRVYLSSSDLIAVLDHERKRTFVVRREGLPDVGKLSIPSDFKHPCVI Homology
BLAST of Cucsat.G11980.T14 vs. ExPASy Swiss-Prot
Match: Q40784 (Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris OX=35872 PE=2 SV=1) HSP 1 Score: 324.3 bits (830), Expect = 1.3e-87 Identity = 152/238 (63.87%), Postives = 190/238 (79.83%), Query Frame = 0
BLAST of Cucsat.G11980.T14 vs. ExPASy Swiss-Prot
Match: P39173 (Putative glucose-6-phosphate 1-epimerase OS=Escherichia coli (strain K12) OX=83333 GN=yeaD PE=1 SV=2) HSP 1 Score: 107.1 bits (266), Expect = 3.1e-22 Identity = 68/207 (32.85%), Postives = 96/207 (46.38%), Query Frame = 0
BLAST of Cucsat.G11980.T14 vs. ExPASy Swiss-Prot
Match: Q8ZPV9 (Putative glucose-6-phosphate 1-epimerase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=yeaD PE=1 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 1.3e-20 Identity = 70/217 (32.26%), Postives = 102/217 (47.00%), Query Frame = 0
BLAST of Cucsat.G11980.T14 vs. ExPASy Swiss-Prot
Match: Q03161 (Glucose-6-phosphate 1-epimerase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YMR099C PE=1 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 3.3e-19 Identity = 73/228 (32.02%), Postives = 103/228 (45.18%), Query Frame = 0
BLAST of Cucsat.G11980.T14 vs. ExPASy Swiss-Prot
Match: P44160 (Putative glucose-6-phosphate 1-epimerase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=HI_1317 PE=3 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.9e-06 Identity = 44/187 (23.53%), Postives = 84/187 (44.92%), Query Frame = 0
BLAST of Cucsat.G11980.T14 vs. NCBI nr
Match: XP_004149758.1 (putative glucose-6-phosphate 1-epimerase isoform X1 [Cucumis sativus]) HSP 1 Score: 498 bits (1281), Expect = 1.96e-176 Identity = 247/248 (99.60%), Postives = 247/248 (99.60%), Query Frame = 0
BLAST of Cucsat.G11980.T14 vs. NCBI nr
Match: XP_008451974.1 (PREDICTED: putative glucose-6-phosphate 1-epimerase isoform X1 [Cucumis melo] >TYK16595.1 putative glucose-6-phosphate 1-epimerase isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 496 bits (1278), Expect = 5.61e-176 Identity = 245/248 (98.79%), Postives = 247/248 (99.60%), Query Frame = 0
BLAST of Cucsat.G11980.T14 vs. NCBI nr
Match: XP_038902961.1 (putative glucose-6-phosphate 1-epimerase isoform X2 [Benincasa hispida]) HSP 1 Score: 492 bits (1266), Expect = 3.78e-174 Identity = 242/248 (97.58%), Postives = 245/248 (98.79%), Query Frame = 0
BLAST of Cucsat.G11980.T14 vs. NCBI nr
Match: XP_008451975.1 (PREDICTED: putative glucose-6-phosphate 1-epimerase isoform X2 [Cucumis melo]) HSP 1 Score: 484 bits (1246), Expect = 4.06e-171 Identity = 238/241 (98.76%), Postives = 241/241 (100.00%), Query Frame = 0
BLAST of Cucsat.G11980.T14 vs. NCBI nr
Match: XP_011653206.1 (putative glucose-6-phosphate 1-epimerase isoform X2 [Cucumis sativus] >KGN53396.2 hypothetical protein Csa_014720 [Cucumis sativus]) HSP 1 Score: 483 bits (1244), Expect = 8.19e-171 Identity = 239/241 (99.17%), Postives = 240/241 (99.59%), Query Frame = 0
BLAST of Cucsat.G11980.T14 vs. ExPASy TrEMBL
Match: A0A0A0KYB3 (Glucose-6-phosphate 1-epimerase OS=Cucumis sativus OX=3659 GN=Csa_4G050850 PE=3 SV=1) HSP 1 Score: 498 bits (1281), Expect = 9.48e-177 Identity = 247/248 (99.60%), Postives = 247/248 (99.60%), Query Frame = 0
BLAST of Cucsat.G11980.T14 vs. ExPASy TrEMBL
Match: A0A5D3CYL3 (Glucose-6-phosphate 1-epimerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004180 PE=3 SV=1) HSP 1 Score: 496 bits (1278), Expect = 2.72e-176 Identity = 245/248 (98.79%), Postives = 247/248 (99.60%), Query Frame = 0
BLAST of Cucsat.G11980.T14 vs. ExPASy TrEMBL
Match: A0A1S3BSP8 (Glucose-6-phosphate 1-epimerase OS=Cucumis melo OX=3656 GN=LOC103493118 PE=3 SV=1) HSP 1 Score: 496 bits (1278), Expect = 2.72e-176 Identity = 245/248 (98.79%), Postives = 247/248 (99.60%), Query Frame = 0
BLAST of Cucsat.G11980.T14 vs. ExPASy TrEMBL
Match: A0A1S3BTJ3 (Glucose-6-phosphate 1-epimerase OS=Cucumis melo OX=3656 GN=LOC103493118 PE=3 SV=1) HSP 1 Score: 484 bits (1246), Expect = 1.97e-171 Identity = 238/241 (98.76%), Postives = 241/241 (100.00%), Query Frame = 0
BLAST of Cucsat.G11980.T14 vs. ExPASy TrEMBL
Match: A0A6J1J840 (Glucose-6-phosphate 1-epimerase OS=Cucurbita maxima OX=3661 GN=LOC111483425 PE=3 SV=1) HSP 1 Score: 481 bits (1238), Expect = 3.37e-170 Identity = 233/248 (93.95%), Postives = 242/248 (97.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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