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Cucsat.G11905.T11 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAAAAGAAAATGAAGAAGACAACTCAAAACGACAGTCCCAAATTCGAATTAGCAAAACAATTTGTGCTTATGGCTTAAAGAAAGAAAGAACGAAGGAACGAAAAAAAAACGAAGATAATCCAATACCAATAACTAGAAAAGCAATTATGTTTGCATTTTCGAAGATACGTGGCTTAGCTTTCCTCTCGGAACAGTAGGAGGGAAAGTAGAGATCGGAAAAGGAGAGTGAAGAAAGGAGAAGAAAAGGAAAAGAAAAGGATTATGATTGGGGGGATGAAACAATTCACCACCAACCCAAATTCCGGCTTACTCTACAAGAGCTCTCGGTTATGATGCTTTGTTTGTTTCTGCAGCTGAAGAGTTGTGTAGAACGAATTCCATTTCGCTATTTTCCCAATTAAAACTCCATAGCTACTAATTCTCTCACTACCCATTTACCGAAAATGGCAGAATCCGGTTTCTGCTTCGATTACTGAGCTCAAATTTTCGGTCCCTTCTCTTTATCCTCTATCAATTGCTTCTATTTGTCGTCTGTGCAATGAGGAACCCGTTCACATTTGTCATTTCTATAATATTTGTACTCTTTCTCACTCTTCAAATCCAAGTAAATGCTACTCCTGCAGGTGAGTGTTTTCTTTCATCATCTTCATTTTCGATCTGTTTGCTTGATGGGTTTGTTCAAATAAGCTTCAATTCTTCATTTAGCTTATCTGAAACGATTGTGATGCTTGGATTGACTGTTATCTTTTGAGAGTGATTTGGCTATTTTTGATGTTTTGGTGGATATTTTTTGTTGTTTACTCCAGGACCATTGATAAAACACTTGTCTTCTTTTGTCAAATGGACCAGGTCTTCATATAAATCCCTCCCAGCACCCCCATCAGGTAGTTGTGAAAAGAAAAGAAAAAAAACTGTTTCTATCTTTTTGGTACTTACTGGTTACCTTTGTTTATTATGGCTGCCGATTTTCTTTTTCATGTGATGTGAGCTTCTGTTTGGCAGATGGGAATGTCCTTCAGTTTGAGAATGGGTACTTGGTTGGGACTGTAGTGGAGGGCAATGAAATTGGAGTTCTTCCACATAAGATCCATGTCTCGAAGGACGGTGAACTTTTCGTTGTCGATTCAGTTAATAGCAATATTGTGAAGATCACTCCTCCGTTATCTAAATGTATGATGCCTTTGCTGTTTGTCGCATAAATTTTATAAGTTGTCTTCTTTCGTATAGTTTCTATTGTGAATGGTAGTCTAGATTTGACTTGCAACATTTTACTATTTAAAATTGTTCCTTGCTTGACCTGAAGGAAGGTGAACTTTTCACTGTTGATTTAGTTAATAGCAATATTCTTCAGTTGATCACTTGATTATCGAAATGCACAGCATTGTTCATCTGATGGTCTCCATAATTTTTCTTCAGATGCAGTCCTTTATTTCGAAAGTTGTAGTCTATATTTAAACTTGCAACATTTAGTTTTGAGAGTTGTTCAATGCTTGATCCATAATGTTCATACAGAAGGCAAATGCTGAGCCTCTGAATTTACTAGTTGAGATTTTTGGAATGCTGATTTTGATTCAAATACAAGGTGTCATACTTTATTCTCACATCTGTCTGATATGATGTGCCATTTTTCGGACCCCATAAAGTCATCACAAGACAAGCTGTACAAGAAGTATGAAGTATTTAATACAGCTCAGTTATGTTTCCATTTACATGTGTTTTATCTTTGATTTGATGCAAAATTATACATTATTCCCCGTGCCTTTTTAGTGCTCCTATTTTAAAAAAATATAAAGTGTAGTGTATGCACTTGTGATGATTCATTTTTGTTGAATAATATTTGGAATCTTTTCATTTATGAATTACTAACTTTATTCCATTTTTTGCTTCTGTGTTATTCTGATTGCCTTCGAAGATACTAGAGCAAGATTGGTTGCTGGGTCATTTCAAAGCCACACTGGACATATTGATGGAAAACCTAACGATGCTCGCTTTAACCATCCAAGAGGTGTAACCGTGGATGATAAAGGAAATGTGTACGTAGCTGATACCTTGAATTTGGCCATCAGAAAGATTGGAGATGCTGGTAGTAGATTGATTCCTTTTGATTTAATAAGGAATACATTAACTCATTACATATCAATCTTCGTGCATGATAGGACTCATGAGACCTAATGGTTATTTTCTTCTTTCTTACAAAGTTGAAGATCACTGTTGTCACATGCGTGTTAATTCTTTATATGAAAGATTAAACATATATAACCTATTGGCCAGGTTTTTTAGTATAATGGTAGTTGACATGGTAAAACAAGAGGTTTTGAGTTCAAATCTCTTCTCCAATTGATTTTAATTGCTGACTTGTTTAGACCATTTGCATTTTTTTATGGCTTTCAATCCAAGAATCTAAGAGACAATATATGTGACAGTTGACCATTATATATAAAGAAGCATGTCATAGTTAAACTTCTTTTGCAGGCGTGACAACCATTGCAGGGGGCAAATCAAATGTTGTAGGCTACAGGGATGGACCGGGCGAAGATGCAAAATTCTCAAACGATTTTGATGTAATGTATGTCCGTTCTACTTGTTCCTTGTTGGTTATTGACCGTGGAAATGCTGCAATTCGTCAAATATCTCTAAATCAGGAGGATTGTGAATATCAAGACAGTTCGATTTCCAACAGTGGTATGGAAATATCCTTGTGTTTCTTTTTGGAGATGAAAGGGATATATACATACATACATATAAATATATATATAACCTCCTCTCTAATAAGAAAAAAGCAAATGTGATACCTTCTCATGGCATCATGTTTCTCAAGAGAGTAGTTTTTCGATTTGGTTTCATGACTATTCCTGATGCTTTCAATACTATTGAACAAAAATAAAATCAATATTGCTTAAGGTTGAAAGACTTCAATCCTACTCTGAACTCTTCCCTCAAAGTTGATCTAGAAGAAGGAAAAAACATACCCTCCTTGTTGCATCATTTGAATCTTTTGCCTTACGCGTAGATTATTGTTCATTACCAGATTCTGATTATGTAATTGTCTAGAATTTCATCAACAGTTGATCTATTGTTTCATGAACAGTCCCCTCCTCCTTGATATTCTGGAAAAGCGGTTTGTTTTCTTTGCATAGATTTTAAGGATAACAATGTTAAAACTGAAGATTTTAGGATTCCATTCACTGCTTCGTCCATCATTCATCAAAATAATGAACTGTGTCTCCCCCACTGACGTTTGGCCTCCTAGTTGTTGATCTATGATAAATGAACAACATTTTTGCCTTCATGACTCACACCATCGTTTATGCCTTTGGTTACTTTGAAGGGTATATTTTGTTTCTTACTGTCCTAAACTTTTATCCCCAGATGTTCTTATGATCATCGGTGCTGTTTTGGCGGGATATGCAACATATATGATTCAGCGGGGCTTTGGAACCTCGAATGTCTCTCAGACAGTAAGTTTCGATTTGATCTATTTTTGAGTTAATTGGCCAACGAGATATTTTAAAATACTCTAATCTACATAGTACTAAGGAGAGCCTAACGTATCCTCAAAATATTCATCCAACAAGTTGACATAATTTTTTTAATTAATTAATTTATTTATAGCACCTAGGGATGAAACTTTTTAAAACAGAAAATGTCTTGTTTGGTAACCATTTGGTTTTTGAAAATTAAACATATTTCTCTCGTTTTGTTACATGGTTTTCATTTTCTTGAGAAAAAGAGTTGAATTTTTGCCAAATTCTAAAAACAGAAACTTCTTTTATTAGTTTTCAGATTTTGGCCTGGTTTTTGAAAATATTGGTCAAAAGTATGTAACTAAGCAATAAATTTGGAGGTGAAAGAGGTGTTTGTAGGCTTATTTTTAAAAAACTAAAACCAAAATTAATCGATTATTAAATATGGCCTAAGAGTCCAAAATGATATCAAACAGTTCTCTTTTTACTTTGATTATACTTTGAATTTGTAACATTTGCCTGGCCTTATGAAATGCAATATTCTTGCAGAATCCTCCTTTAGAAACTGAGTATAGAGAAAAACCATACAAGCCAGAGTCAAGCTCGGTCATGGACAGTGTAAAGGAAGACCCAGGATGGCCTTCATTTGGACGACTCATCATTGATCTTTCCAAACTGGCTCTTGAAGCTGTGGCTAGCATTTTCCTTTCTGTTGTTCCCGCTCGTTTCAGAGCTCGTAACACCAGAAAAGGTCTGACTCCGTTGAAAGATTCTCTCAGGATGCCTGAAGATGAACCGGAGCAACCAACAGTTCAAATGCTGCAGAGAACTCCTGTCCCTTTGACTGAAACAAGACAAGCTCATGTCAATGCAAGAGATCCCTTTCCTGAGCTGATGAAGCCTTCAAAGCTCAACTCAAGTAGTTTCAAAGATCCCTCGCTGCAAAGCAAGCACCGATCCTCAAAACGTCAAGAGCATGCTGATTTTTACAGATCAGGTGAGATTCCTCCACCTTATAGCAGGTCCAAGAGCCAAAAAGAGAGACCTCGACACCGACAGCGTGAGAAAAGTGCAGAGATTAGTTATGGAGCTGTAGGATCTGAGCTAAAGCCAGCTGATTATGACAATCCAAAGTATGAACATTATAATATCAGGAATAAGTATGGACCAAATGGTTCCTTCGGATTCTAACTACTGGGAATCTTTCAATTCCCCTCCAGTCTAGCTTCCATTTCTGGCACGATTTTGACCCGCCTTACATTGACTCATTGTTGCAAGCAACTCAAAACGAACTTCCGACATCGCTAGAGATTGATGTATAATTCTATACTTGGAGGCTCCTGTAATGGTAAAAGTTGAATGTTGAGGTGGAGAAACTTGAGAGCTCCTTGATTGTTTTATTTTTAAAGTTTTACTTTGACCTGGGAATCTTAGACCATTGTAATTTATTGTTTCATAAATGTGACCAATTAATCAAAGTTCGTTTCTTGAAGGCAATGAATTGTAGTAATACAATATCATCTTTTTAAAAATTTATT ATGATCATCGGTGCTGTTTTGGCGGGATATGCAACATATATGATTCAGCGGGGCTTTGGAACCTCGAATGTCTCTCAGACAAATCCTCCTTTAGAAACTGAGTATAGAGAAAAACCATACAAGCCAGAGTCAAGCTCGGTCATGGACAGTGTAAAGGAAGACCCAGGATGGCCTTCATTTGGACGACTCATCATTGATCTTTCCAAACTGGCTCTTGAAGCTGTGGCTAGCATTTTCCTTTCTGTTGTTCCCGCTCGTTTCAGAGCTCGTAACACCAGAAAAGGTCTGACTCCGTTGAAAGATTCTCTCAGGATGCCTGAAGATGAACCGGAGCAACCAACAGTTCAAATGCTGCAGAGAACTCCTGTCCCTTTGACTGAAACAAGACAAGCTCATGTCAATGCAAGAGATCCCTTTCCTGAGCTGATGAAGCCTTCAAAGCTCAACTCAAGTAGTTTCAAAGATCCCTCGCTGCAAAGCAAGCACCGATCCTCAAAACGTCAAGAGCATGCTGATTTTTACAGATCAGGTGAGATTCCTCCACCTTATAGCAGGTCCAAGAGCCAAAAAGAGAGACCTCGACACCGACAGCGTGAGAAAAGTGCAGAGATTAGTTATGGAGCTGTAGGATCTGAGCTAAAGCCAGCTGATTATGACAATCCAAAGTATGAACATTATAATATCAGGAATAAGTATGGACCAAATGGTTCCTTCGGATTCTAA MIIGAVLAGYATYMIQRGFGTSNVSQTNPPLETEYREKPYKPESSSVMDSVKEDPGWPSFGRLIIDLSKLALEAVASIFLSVVPARFRARNTRKGLTPLKDSLRMPEDEPEQPTVQMLQRTPVPLTETRQAHVNARDPFPELMKPSKLNSSSFKDPSLQSKHRSSKRQEHADFYRSGEIPPPYSRSKSQKERPRHRQREKSAEISYGAVGSELKPADYDNPKYEHYNIRNKYGPNGSFGF Homology
BLAST of Cucsat.G11905.T11 vs. NCBI nr
Match: XP_004137231.1 (uncharacterized protein LOC101210502 isoform X2 [Cucumis sativus] >KGN53589.2 hypothetical protein Csa_015190 [Cucumis sativus]) HSP 1 Score: 471 bits (1212), Expect = 1.20e-163 Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 0
BLAST of Cucsat.G11905.T11 vs. NCBI nr
Match: XP_011653292.1 (uncharacterized protein LOC101210502 isoform X1 [Cucumis sativus]) HSP 1 Score: 471 bits (1212), Expect = 1.25e-163 Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 0
BLAST of Cucsat.G11905.T11 vs. NCBI nr
Match: XP_008451752.1 (PREDICTED: uncharacterized protein LOC103492945 isoform X3 [Cucumis melo]) HSP 1 Score: 416 bits (1068), Expect = 4.37e-142 Identity = 220/246 (89.43%), Postives = 228/246 (92.68%), Query Frame = 0
BLAST of Cucsat.G11905.T11 vs. NCBI nr
Match: XP_008451751.1 (PREDICTED: uncharacterized protein LOC103492945 isoform X2 [Cucumis melo]) HSP 1 Score: 416 bits (1068), Expect = 1.03e-141 Identity = 220/246 (89.43%), Postives = 228/246 (92.68%), Query Frame = 0
BLAST of Cucsat.G11905.T11 vs. NCBI nr
Match: XP_008451750.1 (PREDICTED: uncharacterized protein LOC103492945 isoform X1 [Cucumis melo] >TYK16286.1 NHL domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 416 bits (1068), Expect = 1.06e-141 Identity = 220/246 (89.43%), Postives = 228/246 (92.68%), Query Frame = 0
BLAST of Cucsat.G11905.T11 vs. ExPASy TrEMBL
Match: A0A0A0KYW9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G083470 PE=4 SV=1) HSP 1 Score: 471 bits (1212), Expect = 6.03e-164 Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 0
BLAST of Cucsat.G11905.T11 vs. ExPASy TrEMBL
Match: A0A1S3BTC4 (uncharacterized protein LOC103492945 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103492945 PE=4 SV=1) HSP 1 Score: 416 bits (1068), Expect = 2.12e-142 Identity = 220/246 (89.43%), Postives = 228/246 (92.68%), Query Frame = 0
BLAST of Cucsat.G11905.T11 vs. ExPASy TrEMBL
Match: A0A1S3BT05 (uncharacterized protein LOC103492945 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492945 PE=4 SV=1) HSP 1 Score: 416 bits (1068), Expect = 4.97e-142 Identity = 220/246 (89.43%), Postives = 228/246 (92.68%), Query Frame = 0
BLAST of Cucsat.G11905.T11 vs. ExPASy TrEMBL
Match: A0A5D3D0U6 (NHL domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G00570 PE=4 SV=1) HSP 1 Score: 416 bits (1068), Expect = 5.14e-142 Identity = 220/246 (89.43%), Postives = 228/246 (92.68%), Query Frame = 0
BLAST of Cucsat.G11905.T11 vs. ExPASy TrEMBL
Match: A0A1S3BS64 (uncharacterized protein LOC103492945 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492945 PE=4 SV=1) HSP 1 Score: 416 bits (1068), Expect = 5.14e-142 Identity = 220/246 (89.43%), Postives = 228/246 (92.68%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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