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Cucsat.G11905.T10 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAAAAGAAAATGAAGAAGACAACTCAAAACGACAGTCCCAAATTCGAATTAGCAAAACAATTTGTGCTTATGGCTTAAAGAAAGAAAGAACGAAGGAACGAAAAAAAAACGAAGATAATCCAATACCAATAACTAGAAAAGCAATTATGTTTGCATTTTCGAAGATACGTGGCTTAGCTTTCCTCTCGGAACAGTAGGAGGGAAAGTAGAGATCGGAAAAGGAGAGTGAAGAAAGGAGAAGAAAAGGAAAAGAAAAGGATTATGATTGGGGGGATGAAACAATTCACCACCAACCCAAATTCCGGCTTACTCTACAAGAGCTCTCGGTTATGATGCTTTGTTTGTTTCTGCAGCTGAAGAGTTGTGTAGAACGAATTCCATTTCGCTATTTTCCCAATTAAAACTCCATAGCTACTAATTCTCTCACTACCCATTTACCGAAAATGGCAGAATCCGGTTTCTGCTTCGATTACTGAGCTCAAATTTTCGGTCCCTTCTCTTTATCCTCTATCAATTGCTTCTATTTGTCGTCTGTGCAATGAGGAACCCGTTCACATTTGTCATTTCTATAATATTTGTACTCTTTCTCACTCTTCAAATCCAAGTAAATGCTACTCCTGCAGGTGAGTGTTTTCTTTCATCATCTTCATTTTCGATCTGTTTGCTTGATGGGTTTGTTCAAATAAGCTTCAATTCTTCATTTAGCTTATCTGAAACGATTGTGATGCTTGGATTGACTGTTATCTTTTGAGAGTGATTTGGCTATTTTTGATGTTTTGGTGGATATTTTTTGTTGTTTACTCCAGGACCATTGATAAAACACTTGTCTTCTTTTGTCAAATGGACCAGGTCTTCATATAAATCCCTCCCAGCACCCCCATCAGGTAGTTGTGAAAAGAAAAGAAAAAAAACTGTTTCTATCTTTTTGGTACTTACTGGTTACCTTTGTTTATTATGGCTGCCGATTTTCTTTTTCATGTGATGTGAGCTTCTGTTTGGCAGATGGGAATGTCCTTCAGTTTGAGAATGGGTACTTGGTTGGGACTGTAGTGGAGGGCAATGAAATTGGAGTTCTTCCACATAAGATCCATGTCTCGAAGGACGGTGAACTTTTCGTTGTCGATTCAGTTAATAGCAATATTGTGAAGATCACTCCTCCGTTATCTAAATGTATGATGCCTTTGCTGTTTGTCGCATAAATTTTATAAGTTGTCTTCTTTCGTATAGTTTCTATTGTGAATGGTAGTCTAGATTTGACTTGCAACATTTTACTATTTAAAATTGTTCCTTGCTTGACCTGAAGGAAGGTGAACTTTTCACTGTTGATTTAGTTAATAGCAATATTCTTCAGTTGATCACTTGATTATCGAAATGCACAGCATTGTTCATCTGATGGTCTCCATAATTTTTCTTCAGATGCAGTCCTTTATTTCGAAAGTTGTAGTCTATATTTAAACTTGCAACATTTAGTTTTGAGAGTTGTTCAATGCTTGATCCATAATGTTCATACAGAAGGCAAATGCTGAGCCTCTGAATTTACTAGTTGAGATTTTTGGAATGCTGATTTTGATTCAAATACAAGGTGTCATACTTTATTCTCACATCTGTCTGATATGATGTGCCATTTTTCGGACCCCATAAAGTCATCACAAGACAAGCTGTACAAGAAGTATGAAGTATTTAATACAGCTCAGTTATGTTTCCATTTACATGTGTTTTATCTTTGATTTGATGCAAAATTATACATTATTCCCCGTGCCTTTTTAGTGCTCCTATTTTAAAAAAATATAAAGTGTAGTGTATGCACTTGTGATGATTCATTTTTGTTGAATAATATTTGGAATCTTTTCATTTATGAATTACTAACTTTATTCCATTTTTTGCTTCTGTGTTATTCTGATTGCCTTCGAAGATACTAGAGCAAGATTGGTTGCTGGGTCATTTCAAAGCCACACTGGACATATTGATGGAAAACCTAACGATGCTCGCTTTAACCATCCAAGAGGTGTAACCGTGGATGATAAAGGAAATGTGTACGTAGCTGATACCTTGAATTTGGCCATCAGAAAGATTGGAGATGCTGGTAGTAGATTGATTCCTTTTGATTTAATAAGGAATACATTAACTCATTACATATCAATCTTCGTGCATGATAGGACTCATGAGACCTAATGGTTATTTTCTTCTTTCTTACAAAGTTGAAGATCACTGTTGTCACATGCGTGTTAATTCTTTATATGAAAGATTAAACATATATAACCTATTGGCCAGGTTTTTTAGTATAATGGTAGTTGACATGGTAAAACAAGAGGTTTTGAGTTCAAATCTCTTCTCCAATTGATTTTAATTGCTGACTTGTTTAGACCATTTGCATTTTTTTATGGCTTTCAATCCAAGAATCTAAGAGACAATATATGTGACAGTTGACCATTATATATAAAGAAGCATGTCATAGTTAAACTTCTTTTGCAGGCGTGACAACCATTGCAGGGGGCAAATCAAATGTTGTAGGCTACAGGGATGGACCGGGCGAAGATGCAAAATTCTCAAACGATTTTGATGTAATGTATGTCCGTTCTACTTGTTCCTTGTTGGTTATTGACCGTGGAAATGCTGCAATTCGTCAAATATCTCTAAATCAGGAGGATTGTGAATATCAAGACAGTTCGATTTCCAACAGTGGTATGGAAATATCCTTGTGTTTCTTTTTGGAGATGAAAGGGATATATACATACATACATATAAATATATATATAACCTCCTCTCTAATAAGAAAAAAGCAAATGTGATACCTTCTCATGGCATCATGTTTCTCAAGAGAGTAGTTTTTCGATTTGGTTTCATGACTATTCCTGATGCTTTCAATACTATTGAACAAAAATAAAATCAATATTGCTTAAGGTTGAAAGACTTCAATCCTACTCTGAACTCTTCCCTCAAAGTTGATCTAGAAGAAGGAAAAAACATACCCTCCTTGTTGCATCATTTGAATCTTTTGCCTTACGCGTAGATTATTGTTCATTACCAGATTCTGATTATGTAATTGTCTAGAATTTCATCAACAGTTGATCTATTGTTTCATGAACAGTCCCCTCCTCCTTGATATTCTGGAAAAGCGGTTTGTTTTCTTTGCATAGATTTTAAGGATAACAATGTTAAAACTGAAGATTTTAGGATTCCATTCACTGCTTCGTCCATCATTCATCAAAATAATGAACTGTGTCTCCCCCACTGACGTTTGGCCTCCTAGTTGTTGATCTATGATAAATGAACAACATTTTTGCCTTCATGACTCACACCATCGTTTATGCCTTTGGTTACTTTGAAGGGTATATTTTGTTTCTTACTGTCCTAAACTTTTATCCCCAGATGTTCTTATGATCATCGGTGCTGTTTTGGCGGGATATGCAACATATATGATTCAGCGGGGCTTTGGAACCTCGAATGTCTCTCAGACAGTAAGTTTCGATTTGATCTATTTTTGAGTTAATTGGCCAACGAGATATTTTAAAATACTCTAATCTACATAGTACTAAGGAGAGCCTAACGTATCCTCAAAATATTCATCCAACAAGTTGACATAATTTTTTTAATTAATTAATTTATTTATAGCACCTAGGGATGAAACTTTTTAAAACAGAAAATGTCTTGTTTGGTAACCATTTGGTTTTTGAAAATTAAACATATTTCTCTCGTTTTGTTACATGGTTTTCATTTTCTTGAGAAAAAGAGTTGAATTTTTGCCAAATTCTAAAAACAGAAACTTCTTTTATTAGTTTTCAGATTTTGGCCTGGTTTTTGAAAATATTGGTCAAAAGTATGTAACTAAGCAATAAATTTGGAGGTGAAAGAGGTGTTTGTAGGCTTATTTTTAAAAAACTAAAACCAAAATTAATCGATTATTAAATATGGCCTAAGAGTCCAAAATGATATCAAACAGTTCTCTTTTTACTTTGATTATACTTTGAATTTGTAACATTTGCCTGGCCTTATGAAATGCAATATTCTTGCAGAATCCTCCTTTAGAAACTGAGTATAGAGAAAAACCATACAAGCCAGAGTCAAGCTCGGTCATGGACAGTGTAAAGGAAGACCCAGGATGGCCTTCATTTGGACGACTCATCATTGATCTTTCCAAACTGGCTCTTGAAGCTGTGGCTAGCATTTTCCTTTCTGTTGTTCCCGCTCGTTTCAGAGCTCGTAACACCAGAAAAGGTCTGACTCCGTTGAAAGATTCTCTCAGGATGCCTGAAGATGAACCGGAGCAACCAACAGTTCAAATGCTGCAGAGAACTCCTGTCCCTTTGACTGAAACAAGACAAGCTCATGTCAATGCAAGAGATCCCTTTCCTGAGCTGATGAAGCCTTCAAAGCTCAACTCAAGTAGTTTCAAAGATCCCTCGCTGCAAAGCAAGCACCGATCCTCAAAACGTCAAGAGCATGCTGATTTTTACAGATCAGGTGAGATTCCTCCACCTTATAGCAGGTCCAAGAGCCAAAAAGAGAGACCTCGACACCGACAGCGTGAGAAAAGTGCAGAGATTAGTTATGGAGCTGTAGGATCTGAGCTAAAGCCAGCTGATTATGACAATCCAAAGTATGAACATTATAATATCAGGAATAAGTATGGACCAAATGGTTCCTTCGGATTCTAACTACTGGGAATCTTTCAATTCCCCTCCAGTCTAGCTTCCATTTCTGGCACGATTTTGACCCGCCTTACATTGACTCATTGTTGCAAGCAACTCAAAACGAACTTCCGACATCGCTAGAGATTGATGTATAATTCTATACTTGGAGGCTCCTGTAATGGTAAAAGTTGAATGTTGAGGTGGAGAAACTTGAGAGCTCCTTGATTGTTTTATTTTTAAAGTTTTACTTTGACCTGGGAATCTTAGACCATTGTAATTTATTGTTTCATAAATGTGACCAATTAATCAAAGTTCGTTTCTTGAAGGCAATGAATTGTAGTAATACAATATCATCTTTTTAAAAATTTATT ATGAGGAACCCGTTCACATTTGTCATTTCTATAATATTTGTACTCTTTCTCACTCTTCAAATCCAAGTAAATGCTACTCCTGCAGGACCATTGATAAAACACTTGTCTTCTTTTGTCAAATGGACCAGGTCTTCATATAAATCCCTCCCAGCACCCCCATCAGATGGGAATGTCCTTCAGTTTGAGAATGGGTACTTGGTTGGGACTGTAGTGGAGGGCAATGAAATTGGAGTTCTTCCACATAAGATCCATGTCTCGAAGGACGGTGAACTTTTCGTTGTCGATTCAGTTAATAGCAATATTGTGAAGATCACTCCTCCGTTATCTAAATATACTAGAGCAAGATTGGTTGCTGGGTCATTTCAAAGCCACACTGGACATATTGATGGAAAACCTAACGATGCTCGCTTTAACCATCCAAGAGGTGTAACCGTGGATGATAAAGGAAATGTGTACGTAGCTGATACCTTGAATTTGGCCATCAGAAAGATTGGAGATGCTGGCGTGACAACCATTGCAGGGGGCAAATCAAATGTTGTAGGCTACAGGGATGGACCGGGCGAAGATGCAAAATTCTCAAACGATTTTGATGTAATGTATGTCCGTTCTACTTGTTCCTTGTTGGTTATTGACCGTGGAAATGCTGCAATTCGTCAAATATCTCTAAATCAGGAGGATTGTGAATATCAAGACAGTTCGATTTCCAACAGTGGTATGGAAATATCCTTGTGTTTCTTTTTGGAGATGAAAGGGATATATACATACATACATATAAATATATATATAACCTCCTCTCTAATAAGAAAAAAGCAAATGTGA MRNPFTFVISIIFVLFLTLQIQVNATPAGPLIKHLSSFVKWTRSSYKSLPAPPSDGNVLQFENGYLVGTVVEGNEIGVLPHKIHVSKDGELFVVDSVNSNIVKITPPLSKYTRARLVAGSFQSHTGHIDGKPNDARFNHPRGVTVDDKGNVYVADTLNLAIRKIGDAGVTTIAGGKSNVVGYRDGPGEDAKFSNDFDVMYVRSTCSLLVIDRGNAAIRQISLNQEDCEYQDSSISNSGMEISLCFFLEMKGIYTYIHINIYITSSLIRKKQM Homology
BLAST of Cucsat.G11905.T10 vs. ExPASy Swiss-Prot
Match: Q8VZ10 (Protein SUPPRESSOR OF QUENCHING 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SOQ1 PE=1 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 2.3e-04 Identity = 44/148 (29.73%), Postives = 70/148 (47.30%), Query Frame = 0
BLAST of Cucsat.G11905.T10 vs. NCBI nr
Match: XP_004137231.1 (uncharacterized protein LOC101210502 isoform X2 [Cucumis sativus] >KGN53589.2 hypothetical protein Csa_015190 [Cucumis sativus]) HSP 1 Score: 471 bits (1212), Expect = 4.37e-163 Identity = 237/239 (99.16%), Postives = 238/239 (99.58%), Query Frame = 0
BLAST of Cucsat.G11905.T10 vs. NCBI nr
Match: XP_011653292.1 (uncharacterized protein LOC101210502 isoform X1 [Cucumis sativus]) HSP 1 Score: 464 bits (1195), Expect = 1.73e-160 Identity = 236/240 (98.33%), Postives = 238/240 (99.17%), Query Frame = 0
BLAST of Cucsat.G11905.T10 vs. NCBI nr
Match: XP_008451751.1 (PREDICTED: uncharacterized protein LOC103492945 isoform X2 [Cucumis melo]) HSP 1 Score: 450 bits (1158), Expect = 8.17e-155 Identity = 228/239 (95.40%), Postives = 232/239 (97.07%), Query Frame = 0
BLAST of Cucsat.G11905.T10 vs. NCBI nr
Match: XP_038904764.1 (uncharacterized protein LOC120091031 isoform X2 [Benincasa hispida]) HSP 1 Score: 447 bits (1151), Expect = 9.43e-154 Identity = 224/239 (93.72%), Postives = 231/239 (96.65%), Query Frame = 0
BLAST of Cucsat.G11905.T10 vs. NCBI nr
Match: XP_008451750.1 (PREDICTED: uncharacterized protein LOC103492945 isoform X1 [Cucumis melo] >TYK16286.1 NHL domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 444 bits (1143), Expect = 1.60e-152 Identity = 227/240 (94.58%), Postives = 232/240 (96.67%), Query Frame = 0
BLAST of Cucsat.G11905.T10 vs. ExPASy TrEMBL
Match: A0A0A0KYW9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G083470 PE=4 SV=1) HSP 1 Score: 464 bits (1195), Expect = 8.36e-161 Identity = 236/240 (98.33%), Postives = 238/240 (99.17%), Query Frame = 0
BLAST of Cucsat.G11905.T10 vs. ExPASy TrEMBL
Match: A0A1S3BT05 (uncharacterized protein LOC103492945 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492945 PE=4 SV=1) HSP 1 Score: 450 bits (1158), Expect = 3.95e-155 Identity = 228/239 (95.40%), Postives = 232/239 (97.07%), Query Frame = 0
BLAST of Cucsat.G11905.T10 vs. ExPASy TrEMBL
Match: A0A5D3D0U6 (NHL domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G00570 PE=4 SV=1) HSP 1 Score: 444 bits (1143), Expect = 7.72e-153 Identity = 227/240 (94.58%), Postives = 232/240 (96.67%), Query Frame = 0
BLAST of Cucsat.G11905.T10 vs. ExPASy TrEMBL
Match: A0A1S3BS64 (uncharacterized protein LOC103492945 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492945 PE=4 SV=1) HSP 1 Score: 444 bits (1143), Expect = 7.72e-153 Identity = 227/240 (94.58%), Postives = 232/240 (96.67%), Query Frame = 0
BLAST of Cucsat.G11905.T10 vs. ExPASy TrEMBL
Match: A0A5A7V763 (NHL domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G001810 PE=4 SV=1) HSP 1 Score: 437 bits (1124), Expect = 6.09e-150 Identity = 226/241 (93.78%), Postives = 231/241 (95.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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