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Cucsat.G11657.T3 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CTACTCCCTCGCACACACCACCATTGCCGGACGCTACCTGTTACTTCTCCTCTGGTAACCTCTCTCTTCCTTTTCAACATACGGTGTAATGGTGATGATGGGGGAGCTTTATTCATTTAATTGTTGTTTTTTTTTTTTGTATTTATTTTATTGTTTTTTTATGGTCTCGATCAATCAGTTCATGGTTATTGGTTTTCTTCATTTGGTGATTTTGTGGGGGAAGGGAGGATTGGCTGCATTATTTATACTTCAGCAAACCACATTATCTATTTATTGTAATATCTGCCAGGGTATGGATATGTGACTTTGGTAAATTTTCTGTACTTCCAATTTTCCATTTTGATTAGCATTCATATTGGTTTATCTCTGTGCACCGTACTTCCAAATTTTAGATTGTGAAATATCTTTGAAGTATGAATGCAATGGAGGAAGAGAAAATCATTAGGTCTAATGGCAATGATGGGAGATATATTTGTTATGGATTTGATTTATTCTTAGGTTTTTGTGACAATTCTCATGATTTGTTTGATTTCTTCGGTTCATTGTTTTTCCTGGCATGTACTGTTTACACTCCAGGAGAGCATGTAATCTATTTTACAATGTCTGTGAAGACTGAATGTAGGAATATGAAACTCTAATCTGTGCAATTTTCATTTTCCATTTTGATTAGCATTCTGGTTGAGTACGGATGAGTCTAGCAAATTGTTTTTGGACAATATTCAAGCAACGGAAGGTGAAACGTGTTACAAGCAATGGAGAACAGGTAAGCTTTCTCTTTCATTTGTTATCTTTTGAAGATATAATGAAGGCTACAGAAATAGTCTTCCCATTATTCTTTCTTGTGGTGGGTGGTCCTCCCACCACAAGGGTTGGGAAGGAATCGAGGTTAGGATGTTGTTGAAAGGATATCCATGGCAGATAACGAAACAAAATGGAAAGCTGGTAGAGTAGTATGGAAATGTTCCTCCTATGTAGTTGGAATGAATTGAGGTTAGGATGCTAGTGAAAGGATTTCCATGGCAGATCAGGAAAAAAAGAAAGCTGGGAAGTAGAATAGAAATGCGAAGGAGCACACTGAGAGCCAATTCTGATCTATCAATTAACCATGCAACAACACCCCCTCCCCCCAATTCTCCCCTCCAACTAACAACACTATAACATGTTTTTATCAAAGTTCCAGTTATTTTAATTTTCTCTGTCCCTGTTTTCTTGGTTCAGGTACACGTAAAGACGGGAAAATCCAATGGTTTCCCTCATGGAAAGAGTGAAGATCTAGCTGCAACTCGAATTCAAAATGCATTTCGTACATTTACGGTATATTGAATGTCCTTAATAGCTTGTTACTTATCAATTTTGCTTTTTTTTCATTGAGCTGTTCCCCGTGGCTTTATGAAAATTACCAGCTCTCCTGGATCTAATTTGTTGGTTAACTTTTGCCCTTGTTATAATTTATAAACTCTGGAGTTGCGTCTTCAGAGACCAAATTCCTATTAGTGTCCTATCTTTTGGCATATTCAATTGCATTATTTTGAAAATTATTCCCACTTCTCAGTTCATGGTTTTCAATTCACCAAATAAATTAAGAAAGAGCATGCAAAATGATAGAAGCAACAACACCAAACTCATAAGTCATAATCTTCTTGTTTCTTGTGAGCTAACAAAGAGTCTTGAACTACTTTGATTCTGATACATGATAATTTTTTATTGAGGCCTTCCTTAGTGATTCATATTTAAAGATGAATTCTTCAGGCATTATCATATCATTTTGGGCCTTCGTTACCCACAATACTTGTGATTGCCTAACACATAATTTTGTACAATGTTGATGGGGCAGACTTTTATGCTAACCAATGAGGACACATTGTCTATGATTTATTTCAGATACAATCATACACACATGTAGCCCAATGGTACTAACAAATTTGTAAATTGTTTTCCATGAGATGGTTTAATCATTTGTTGTGCAGGCTAGAAAGGACGTACATAATTCGAAAGTACCAGAGAGATGCCAGGATCTAGTTCAAGGTGAAACGGCTACAAAACAAGTGTCAAGCTTCATTCATTCATGGAGCAGAATGCAGCAAGAAATTAGAGCACGTAGGCTCTGTATGGTCACAGAATATCGAGTCAAGCAAAAGAAACTGGAAAATCAGCTGAAGCTTGAGGCTAAAATTCATGAACTTGAGGTAAGTACCATTGACTTTCCTCCTTGAACTATTGAACATTATGATGTTCAACCATCACATTAAAAAATCTGTTCAATAAGCTTTGTCAAAATTTGAAGTCTAATTATTTTCTTAAAAGAACACGATTCTTCTGAATAAAGTTATCATTCCCCAGAGGGAAATTTTTTATTTTTCTTTCAAGCACTTTATTTATAGCTAAAGGGTATCTTTTAAGTTTTATCTTCAACATAATTGCCTTTTACAAGAGGGATAACATTGCCTGTTATTTGATGTTCAACCATCACAGGCAGAATGGTCCGGTGGGTCAGAAACAAAGGAGGAAATACTTTTCAAGATTCAGCAACGAGAAGAAGCTGCTGTAAGACGGGAGCGGGCTATGGCTTATGCATTCTCTCATCAGGTATGCTTCATGACTTCATCAATCCCATACGGACCTAAATTGAATAGTGCTCTTTTAATTGTAGCAAATTGAAATCTAACGTTTATAAATATAATTGAAAAGTGAAGGAAGGCATTAGTTTTACTTAATAAACTGGTTCTTAACATTTGTTCTTTACAATGTCTTCTTTTAACTTTTTTTTCTCCCGTTGAAAGTTGTTTACTACCGTTAAAAATATTGTTTATATTAGTTGTACCAACCTGGACATATATCAACCATTTAAAACGTATACTTTCAACTAAGAGGCCAACTGTTTGAATCTTCTAATGAAATATACTTCAATTGCTTAGAACATATGCTTTTCAAAAGTTTGAATTTTCCAAATAGATTTTGATAAAAAAAAAAAAATATGACTTTAAGCTAATAAAGGGTTTTGAATCATAAACCATTTAAACTCTAATCCTTCCTTGCTAAATTATTCAATGACTTTGAATGGTAAAAATTAATCCGTGATAGTTTGACTTTGGCAAGAGTTTTGTTTCATTAAACTTTATTTCGGTTGAAAAACTTACAGTTATTTTCCGCTGGTCCTAATATCTTCCATTTTTTTTGTTAGTGTTTCTGTTTTTCATAGTACTTGGAATTTGTTTTGGGGCTTATCATTTGAAGATTTTACATTGTATTTTAAAAAGTTCATAAACCACATGTTTTGAAATTAATGCTAGAGACTCGAGAAATGACCTAAAACATAAGTCTACATGGCATTAAACAAAACTTTTGTAAAAATATTTAGAATATTGAATGATAGGAGGGATCAAAATGAACTTCTAATGTTTTGAGTGTACTAAACAAAGCACTGGTCAAGATAAAATAAGGAGGAAAGTTGAGAGACAAATAAATTAAAACATTTATTAGTATCTTGACTTAGTCACCTTTCCTCAAAAAAAAAAAAAAAGCCACCTATTGACTTTGGTTTAATAAAATTTATCTCACAGTAAATGTTAGTTTATTGATGGGATTTCTTAACTGACTAAAGTTGCTTAAATTATTGCGTGCTCAAACTATTGTATCATTAAAAGAATTGACTGTATTAGATCACCACTCACTTTATCATCCATTACTTGTTCTAATCATTTAATGATCACTAGAGAACTCTAAAAAGATATTTTTATTTTTGTAGGTTTTAATATTATATAAAACTGACGTTTAAAAAGCGAAGTGTTGATGAACTCATTTATTTAAGCTGATTTTCTGATATAAATGTGAGAATTCTTTGCTCCTTTTCTATTGACATGGATGGTTACTTGTGGCCGTCTCTAATTCTTTGAAAACCATTTGGCTTTTAACCTTTTTTTTTATTATGCAAATTAAGCACAATAATGAGTGAACACATCGAAAATTTATCAATTATGAAAACAAACTTGACATATAAATCAACGAAACTCCAAAGCAGTTGGTAAACAAGAGACATATCTTACACATGTGGCAAATAAGAGTTCATTATCAGCTTGAAATCAGTTCCTGTGTTTTTCTGCAAACAAAGTCTTTCAAATGAGTATTGTTAATTTTCTGCTATATTATTTAATGGTGAACCCATATGCAGTGGAGGGCCAATTCCATCTTAGATCTGAGCCCGGCTTCGTATAGCCTTGACAAAGAAAACTGGGGATGGAGCTGGAAGGAGAGATGGATTGCTGCTCGGCCATGGGAGATCCGAGCTAATACTCATCCCACCATCCCAAAGAAGGTGCAAATGAAACAAACAAGCAAAGTCAATAAAGTGACGTATCAATCGGGGTTGAAGGTCTCAAACTTAGCTGGACATTCTTCCTTGAACAACAAGGCGAGTTCAAAGGCCAAAAATTCTGCTATATCCAACTGCTGAAACAAGCTACAAGAAGCTGAAGGTTATTTCTGTATATAATCAACCAAACTCATAAACCAACTGACAAATTCAATGATATGAATTTGGTAGTTCTCTCTATAATTTCACCCGGCTTGCTTTGTAGTGTAAATTTCTATTATTATGCCTAATAAGAGAAATTCATATATTCTATGAAAAAACATGCTTTGTATCCCATCATTTTTT ATGCAGCAAGAAATTAGAGCACGTAGGCTCTGTATGGTCACAGAATATCGAGTCAAGCAAAAGAAACTGGAAAATCAGCTGAAGCTTGAGGCTAAAATTCATGAACTTGAGGCAGAATGGTCCGGTGGGTCAGAAACAAAGGAGGAAATACTTTTCAAGATTCAGCAACGAGAAGAAGCTGCTGTAAGACGGGAGCGGGCTATGGCTTATGCATTCTCTCATCAGTGGAGGGCCAATTCCATCTTAGATCTGAGCCCGGCTTCGTATAGCCTTGACAAAGAAAACTGGGGATGGAGCTGGAAGGAGAGATGGATTGCTGCTCGGCCATGGGAGATCCGAGCTAATACTCATCCCACCATCCCAAAGAAGGTGCAAATGAAACAAACAAGCAAAGTCAATAAAGTGACGTATCAATCGGGGTTGAAGGTCTCAAACTTAGCTGGACATTCTTCCTTGAACAACAAGGCGAGTTCAAAGGCCAAAAATTCTGCTATATCCAACTGCTGA MQQEIRARRLCMVTEYRVKQKKLENQLKLEAKIHELEAEWSGGSETKEEILFKIQQREEAAVRRERAMAYAFSHQWRANSILDLSPASYSLDKENWGWSWKERWIAARPWEIRANTHPTIPKKVQMKQTSKVNKVTYQSGLKVSNLAGHSSLNNKASSKAKNSAISNC Homology
BLAST of Cucsat.G11657.T3 vs. ExPASy Swiss-Prot
Match: Q9LKA0 (Protein IQ-DOMAIN 10 OS=Arabidopsis thaliana OX=3702 GN=IQD10 PE=1 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 3.0e-42 Identity = 91/143 (63.64%), Postives = 109/143 (76.22%), Query Frame = 0
BLAST of Cucsat.G11657.T3 vs. ExPASy Swiss-Prot
Match: Q0WNP8 (Protein IQ-DOMAIN 9 OS=Arabidopsis thaliana OX=3702 GN=IQD9 PE=1 SV=1) HSP 1 Score: 161.0 bits (406), Expect = 1.2e-38 Identity = 79/141 (56.03%), Postives = 103/141 (73.05%), Query Frame = 0
BLAST of Cucsat.G11657.T3 vs. ExPASy Swiss-Prot
Match: F4J061 (Protein IQ-DOMAIN 5 OS=Arabidopsis thaliana OX=3702 GN=IQD5 PE=1 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 3.5e-19 Identity = 67/184 (36.41%), Postives = 98/184 (53.26%), Query Frame = 0
BLAST of Cucsat.G11657.T3 vs. ExPASy Swiss-Prot
Match: O64852 (Protein IQ-DOMAIN 6 OS=Arabidopsis thaliana OX=3702 GN=IQD6 PE=1 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 3.3e-17 Identity = 60/151 (39.74%), Postives = 85/151 (56.29%), Query Frame = 0
BLAST of Cucsat.G11657.T3 vs. ExPASy Swiss-Prot
Match: Q9SF32 (Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana OX=3702 GN=IQD1 PE=1 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 4.2e-12 Identity = 41/112 (36.61%), Postives = 63/112 (56.25%), Query Frame = 0
BLAST of Cucsat.G11657.T3 vs. NCBI nr
Match: XP_011653310.1 (protein IQ-DOMAIN 1 [Cucumis sativus] >XP_031739729.1 protein IQ-DOMAIN 1 [Cucumis sativus]) HSP 1 Score: 323 bits (828), Expect = 9.01e-110 Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0
BLAST of Cucsat.G11657.T3 vs. NCBI nr
Match: KAA0059009.1 (protein IQ-DOMAIN 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 318 bits (815), Expect = 1.64e-107 Identity = 165/168 (98.21%), Postives = 166/168 (98.81%), Query Frame = 0
BLAST of Cucsat.G11657.T3 vs. NCBI nr
Match: KGN53611.2 (hypothetical protein Csa_014927 [Cucumis sativus]) HSP 1 Score: 323 bits (828), Expect = 2.95e-107 Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0
BLAST of Cucsat.G11657.T3 vs. NCBI nr
Match: TYK19566.1 (protein IQ-DOMAIN 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 317 bits (813), Expect = 3.31e-107 Identity = 165/168 (98.21%), Postives = 166/168 (98.81%), Query Frame = 0
BLAST of Cucsat.G11657.T3 vs. NCBI nr
Match: XP_016901188.1 (PREDICTED: protein IQ-DOMAIN 1-like [Cucumis melo]) HSP 1 Score: 317 bits (813), Expect = 2.22e-106 Identity = 165/168 (98.21%), Postives = 166/168 (98.81%), Query Frame = 0
BLAST of Cucsat.G11657.T3 vs. ExPASy TrEMBL
Match: A0A0A0KVH7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G088730 PE=4 SV=1) HSP 1 Score: 323 bits (828), Expect = 4.36e-110 Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0
BLAST of Cucsat.G11657.T3 vs. ExPASy TrEMBL
Match: A0A5A7UZQ4 (Protein IQ-DOMAIN 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold233G00280 PE=4 SV=1) HSP 1 Score: 318 bits (815), Expect = 7.95e-108 Identity = 165/168 (98.21%), Postives = 166/168 (98.81%), Query Frame = 0
BLAST of Cucsat.G11657.T3 vs. ExPASy TrEMBL
Match: A0A5D3D7L8 (Protein IQ-DOMAIN 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold416G00700 PE=4 SV=1) HSP 1 Score: 317 bits (813), Expect = 1.60e-107 Identity = 165/168 (98.21%), Postives = 166/168 (98.81%), Query Frame = 0
BLAST of Cucsat.G11657.T3 vs. ExPASy TrEMBL
Match: A0A1S4DYY8 (protein IQ-DOMAIN 1-like OS=Cucumis melo OX=3656 GN=LOC103492919 PE=4 SV=1) HSP 1 Score: 317 bits (813), Expect = 1.08e-106 Identity = 165/168 (98.21%), Postives = 166/168 (98.81%), Query Frame = 0
BLAST of Cucsat.G11657.T3 vs. ExPASy TrEMBL
Match: A0A6J1E3W9 (protein IQ-DOMAIN 1-like OS=Cucurbita moschata OX=3662 GN=LOC111430594 PE=4 SV=1) HSP 1 Score: 273 bits (699), Expect = 1.73e-90 Identity = 143/163 (87.73%), Postives = 149/163 (91.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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