Cucsat.G11365.T1 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G11365.T1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Protein of Unknown Function (DUF239)
Location	ctg1798: 15980 .. 16991 (-)
RNA-Seq Expression	Cucsat.G11365.T1
Synteny	Cucsat.G11365.T1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTATGGAATGTGTTGATGTTTACAAACAACCTGCTTTCCACCATCCATTGCTTAAAAACCATACCATTCAGGTTCTCTTTTTGTATATCTTTTGATACCTCTTTACATATAAACTTGATGTTTAATTATAAATCATTTAAACTAAAAAAAATTGACCTTCCAAACATACAACCACAATGTTTATATTAGGTAAACACTCAATACCGTATATATATATAACTTTAATTATTTACATTTAAGATAGGATATAAATTTAATTGGGAGTGACCTAAATTTGCCTAACATTCTTTATTAGTTTGTAGACGTATAGAGCCCTTTGGTAACGTTCTCGTTCCCTGTTTCTTGTTCTTTGTTCTTGGTTTTCTGTTCTTTCTTCTTTTAGAACAAAAGACTTGAATGTGTTTAATAATTGTTTCTATTTTTTTTTAAAAAAAAAAACAGAAATAAAAATTTCAAACTTCAAAGTTCAAAAATAAAAATTTATGTTTCATTGCCATTTTAAATGGAAGTGAATCGATTATTCAAATGAATACTGTAAATTGAATGTAGATGAAACCTGATTTGAGCATAGATTTGAAGATGTCGAGTACACAAAATGAATCATTTGGATCGAGATTGTATCCATTTCAAACATGGCAAAAAAGTGGGAGTTGTCCCAAAGGAACAATTCCCATTCGGAGGGTTGGTAGAGAAGACCTATTGAGAGCCAATTCTCTCCATCACTTTGGCAAGAAATTTCCTTATGGAGATTCCAAACTCGGCCAAGAATTCAATCGTTCCGTATGTATATCTATAAATAATTGAAAGTTCATTCATTCATTTATTATGGATTCATAATTTAATGGATTAATTTGCTTCTTTGTTTTGTGTTAAATATGATATCATTAGACAGCTATCTTGATCACAACGGGAGTTAATTACATTGGAGCTTCAGGAAATATCAATGTTTGGAACCCTAAAGTTGATTTACCTAATGACTTCACAGCTTCTAAAGTTTGGTTAAAAAATGG

Coding sequence (CDS)

ATTATGGAATGTGTTGATGTTTACAAACAACCTGCTTTCCACCATCCATTGCTTAAAAACCATACCATTCAGATGAAACCTGATTTGAGCATAGATTTGAAGATGTCGAGTACACAAAATGAATCATTTGGATCGAGATTGTATCCATTTCAAACATGGCAAAAAAGTGGGAGTTGTCCCAAAGGAACAATTCCCATTCGGAGGGTTGGTAGAGAAGACCTATTGAGAGCCAATTCTCTCCATCACTTTGGCAAGAAATTTCCTTATGGAGATTCCAAACTCGGCCAAGAATTCAATCGTTCCACAGCTATCTTGATCACAACGGGAGTTAATTACATTGGAGCTTCAGGAAATATCAATGTTTGGAACCCTAAAGTTGATTTACCTAATGACTTCACAGCTTCTAAAGTTTGGTTAAAAAAT

Protein sequence

IMECVDVYKQPAFHHPLLKNHTIQMKPDLSIDLKMSSTQNESFGSRLYPFQTWQKSGSCPKGTIPIRRVGREDLLRANSLHHFGKKFPYGDSKLGQEFNRSTAILITTGVNYIGASGNINVWNPKVDLPNDFTASKVWLKN

Homology

[Close]

BLAST of Cucsat.G11365.T1 vs. NCBI nr
Match: XP_004141419.2 (uncharacterized protein LOC101213587 [Cucumis sativus])

HSP 1 Score: 297 bits (760), Expect = 5.99e-98
Identity = 140/141 (99.29%), Postives = 140/141 (99.29%), Query Frame = 0


Query: 1   IMECVDVYKQPAFHHPLLKNHTIQMKPDLSIDLKMSSTQNESFGSRLYPFQTWQKSGSCP 60
           IMECVDVYKQPAF HPLLKNHTIQMKPDLSIDLKMSSTQNESFGSRLYPFQTWQKSGSCP
Sbjct: 53  IMECVDVYKQPAFDHPLLKNHTIQMKPDLSIDLKMSSTQNESFGSRLYPFQTWQKSGSCP 112

Query: 61  KGTIPIRRVGREDLLRANSLHHFGKKFPYGDSKLGQEFNRSTAILITTGVNYIGASGNIN 120
           KGTIPIRRVGREDLLRANSLHHFGKKFPYGDSKLGQEFNRSTAILITTGVNYIGASGNIN
Sbjct: 113 KGTIPIRRVGREDLLRANSLHHFGKKFPYGDSKLGQEFNRSTAILITTGVNYIGASGNIN 172

Query: 121 VWNPKVDLPNDFTASKVWLKN 141
           VWNPKVDLPNDFTASKVWLKN
Sbjct: 173 VWNPKVDLPNDFTASKVWLKN 193

[Close]

BLAST of Cucsat.G11365.T1 vs. NCBI nr
Match: KGN55313.1 (hypothetical protein Csa_012040 [Cucumis sativus])

HSP 1 Score: 297 bits (760), Expect = 7.90e-98
Identity = 140/141 (99.29%), Postives = 140/141 (99.29%), Query Frame = 0


Query: 1   IMECVDVYKQPAFHHPLLKNHTIQMKPDLSIDLKMSSTQNESFGSRLYPFQTWQKSGSCP 60
           IMECVDVYKQPAF HPLLKNHTIQMKPDLSIDLKMSSTQNESFGSRLYPFQTWQKSGSCP
Sbjct: 62  IMECVDVYKQPAFDHPLLKNHTIQMKPDLSIDLKMSSTQNESFGSRLYPFQTWQKSGSCP 121

Query: 61  KGTIPIRRVGREDLLRANSLHHFGKKFPYGDSKLGQEFNRSTAILITTGVNYIGASGNIN 120
           KGTIPIRRVGREDLLRANSLHHFGKKFPYGDSKLGQEFNRSTAILITTGVNYIGASGNIN
Sbjct: 122 KGTIPIRRVGREDLLRANSLHHFGKKFPYGDSKLGQEFNRSTAILITTGVNYIGASGNIN 181

Query: 121 VWNPKVDLPNDFTASKVWLKN 141
           VWNPKVDLPNDFTASKVWLKN
Sbjct: 182 VWNPKVDLPNDFTASKVWLKN 202

[Close]

BLAST of Cucsat.G11365.T1 vs. NCBI nr
Match: XP_016901292.1 (PREDICTED: uncharacterized protein LOC103493897 [Cucumis melo] >KAA0064483.1 uncharacterized protein E6C27_scaffold255G001980 [Cucumis melo var. makuwa])

HSP 1 Score: 269 bits (688), Expect = 6.34e-87
Identity = 124/141 (87.94%), Postives = 132/141 (93.62%), Query Frame = 0


Query: 1   IMECVDVYKQPAFHHPLLKNHTIQMKPDLSIDLKMSSTQNESFGSRLYPFQTWQKSGSCP 60
           ++ CVD+YKQPAF HPLLKNHTIQMKPDL IDLKMS+TQN+SFGS   PFQ WQKSGSCP
Sbjct: 63  VIGCVDIYKQPAFDHPLLKNHTIQMKPDLDIDLKMSNTQNKSFGSESNPFQIWQKSGSCP 122

Query: 61  KGTIPIRRVGREDLLRANSLHHFGKKFPYGDSKLGQEFNRSTAILITTGVNYIGASGNIN 120
           KGTIPIRRV REDLLRANS+HHFGKKFPYG SKLGQEFNRSTAILITTG+NYIGASGNIN
Sbjct: 123 KGTIPIRRVRREDLLRANSVHHFGKKFPYGTSKLGQEFNRSTAILITTGLNYIGASGNIN 182

Query: 121 VWNPKVDLPNDFTASKVWLKN 141
           VWNPKVDLPNDFTASK+WLKN
Sbjct: 183 VWNPKVDLPNDFTASKIWLKN 203

[Close]

BLAST of Cucsat.G11365.T1 vs. NCBI nr
Match: XP_038896670.1 (uncharacterized protein LOC120084931 [Benincasa hispida])

HSP 1 Score: 246 bits (627), Expect = 1.21e-77
Identity = 110/141 (78.01%), Postives = 126/141 (89.36%), Query Frame = 0


Query: 1   IMECVDVYKQPAFHHPLLKNHTIQMKPDLSIDLKMSSTQNESFGSRLYPFQTWQKSGSCP 60
           I++CVD+YKQPAF HP LKNHTIQMKP+L +D KMS+TQNESFGS  + FQ WQKSGSCP
Sbjct: 69  IIDCVDIYKQPAFDHPSLKNHTIQMKPELGMDWKMSTTQNESFGSEPFHFQVWQKSGSCP 128

Query: 61  KGTIPIRRVGREDLLRANSLHHFGKKFPYGDSKLGQEFNRSTAILITTGVNYIGASGNIN 120
           KGTIPIRR+  +DLLR NSLH+FGKKFPYG+SKLG E +RSTAIL TTG NYIGASG+IN
Sbjct: 129 KGTIPIRRIREQDLLRTNSLHNFGKKFPYGNSKLGPEISRSTAILFTTGFNYIGASGDIN 188

Query: 121 VWNPKVDLPNDFTASKVWLKN 141
           +WNPKVDLPNDFTA+K+WLKN
Sbjct: 189 IWNPKVDLPNDFTATKIWLKN 209

[Close]

BLAST of Cucsat.G11365.T1 vs. NCBI nr
Match: TYK20107.1 (uncharacterized protein E5676_scaffold134G002320 [Cucumis melo var. makuwa])

HSP 1 Score: 231 bits (588), Expect = 5.37e-72
Identity = 111/141 (78.72%), Postives = 119/141 (84.40%), Query Frame = 0


Query: 1   IMECVDVYKQPAFHHPLLKNHTIQMKPDLSIDLKMSSTQNESFGSRLYPFQTWQKSGSCP 60
           ++ CVD+YKQPAF HPLLKNHTIQM          S+TQN+SFGS   PFQ WQKSGSCP
Sbjct: 63  VIGCVDIYKQPAFDHPLLKNHTIQM----------SNTQNKSFGSESNPFQIWQKSGSCP 122

Query: 61  KGTIPIRRVGREDLLRANSLHHFGKKFPYGDSKLGQEFNRSTAILITTGVNYIGASGNIN 120
           KGTIPIRRV REDLLRANS+HHFGKKFPYG SKLGQEFN    ILITTG+NYIGASGNIN
Sbjct: 123 KGTIPIRRVRREDLLRANSVHHFGKKFPYGTSKLGQEFN---PILITTGLNYIGASGNIN 182

Query: 121 VWNPKVDLPNDFTASKVWLKN 141
           VWNPKVDLPNDFTASK+WLKN
Sbjct: 183 VWNPKVDLPNDFTASKIWLKN 190

[Close]

BLAST of Cucsat.G11365.T1 vs. ExPASy TrEMBL
Match: A0A0A0L0M3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G645870 PE=4 SV=1)

HSP 1 Score: 297 bits (760), Expect = 3.82e-98
Identity = 140/141 (99.29%), Postives = 140/141 (99.29%), Query Frame = 0


Query: 1   IMECVDVYKQPAFHHPLLKNHTIQMKPDLSIDLKMSSTQNESFGSRLYPFQTWQKSGSCP 60
           IMECVDVYKQPAF HPLLKNHTIQMKPDLSIDLKMSSTQNESFGSRLYPFQTWQKSGSCP
Sbjct: 62  IMECVDVYKQPAFDHPLLKNHTIQMKPDLSIDLKMSSTQNESFGSRLYPFQTWQKSGSCP 121

Query: 61  KGTIPIRRVGREDLLRANSLHHFGKKFPYGDSKLGQEFNRSTAILITTGVNYIGASGNIN 120
           KGTIPIRRVGREDLLRANSLHHFGKKFPYGDSKLGQEFNRSTAILITTGVNYIGASGNIN
Sbjct: 122 KGTIPIRRVGREDLLRANSLHHFGKKFPYGDSKLGQEFNRSTAILITTGVNYIGASGNIN 181

Query: 121 VWNPKVDLPNDFTASKVWLKN 141
           VWNPKVDLPNDFTASKVWLKN
Sbjct: 182 VWNPKVDLPNDFTASKVWLKN 202

[Close]

BLAST of Cucsat.G11365.T1 vs. ExPASy TrEMBL
Match: A0A5A7V8M6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G001980 PE=4 SV=1)

HSP 1 Score: 269 bits (688), Expect = 3.07e-87
Identity = 124/141 (87.94%), Postives = 132/141 (93.62%), Query Frame = 0


Query: 1   IMECVDVYKQPAFHHPLLKNHTIQMKPDLSIDLKMSSTQNESFGSRLYPFQTWQKSGSCP 60
           ++ CVD+YKQPAF HPLLKNHTIQMKPDL IDLKMS+TQN+SFGS   PFQ WQKSGSCP
Sbjct: 63  VIGCVDIYKQPAFDHPLLKNHTIQMKPDLDIDLKMSNTQNKSFGSESNPFQIWQKSGSCP 122

Query: 61  KGTIPIRRVGREDLLRANSLHHFGKKFPYGDSKLGQEFNRSTAILITTGVNYIGASGNIN 120
           KGTIPIRRV REDLLRANS+HHFGKKFPYG SKLGQEFNRSTAILITTG+NYIGASGNIN
Sbjct: 123 KGTIPIRRVRREDLLRANSVHHFGKKFPYGTSKLGQEFNRSTAILITTGLNYIGASGNIN 182

Query: 121 VWNPKVDLPNDFTASKVWLKN 141
           VWNPKVDLPNDFTASK+WLKN
Sbjct: 183 VWNPKVDLPNDFTASKIWLKN 203

[Close]

BLAST of Cucsat.G11365.T1 vs. ExPASy TrEMBL
Match: A0A1S4DZ87 (uncharacterized protein LOC103493897 OS=Cucumis melo OX=3656 GN=LOC103493897 PE=4 SV=1)

HSP 1 Score: 269 bits (688), Expect = 3.07e-87
Identity = 124/141 (87.94%), Postives = 132/141 (93.62%), Query Frame = 0


Query: 1   IMECVDVYKQPAFHHPLLKNHTIQMKPDLSIDLKMSSTQNESFGSRLYPFQTWQKSGSCP 60
           ++ CVD+YKQPAF HPLLKNHTIQMKPDL IDLKMS+TQN+SFGS   PFQ WQKSGSCP
Sbjct: 63  VIGCVDIYKQPAFDHPLLKNHTIQMKPDLDIDLKMSNTQNKSFGSESNPFQIWQKSGSCP 122

Query: 61  KGTIPIRRVGREDLLRANSLHHFGKKFPYGDSKLGQEFNRSTAILITTGVNYIGASGNIN 120
           KGTIPIRRV REDLLRANS+HHFGKKFPYG SKLGQEFNRSTAILITTG+NYIGASGNIN
Sbjct: 123 KGTIPIRRVRREDLLRANSVHHFGKKFPYGTSKLGQEFNRSTAILITTGLNYIGASGNIN 182

Query: 121 VWNPKVDLPNDFTASKVWLKN 141
           VWNPKVDLPNDFTASK+WLKN
Sbjct: 183 VWNPKVDLPNDFTASKIWLKN 203

[Close]

BLAST of Cucsat.G11365.T1 vs. ExPASy TrEMBL
Match: A0A5D3D964 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002320 PE=4 SV=1)

HSP 1 Score: 231 bits (588), Expect = 2.60e-72
Identity = 111/141 (78.72%), Postives = 119/141 (84.40%), Query Frame = 0


Query: 1   IMECVDVYKQPAFHHPLLKNHTIQMKPDLSIDLKMSSTQNESFGSRLYPFQTWQKSGSCP 60
           ++ CVD+YKQPAF HPLLKNHTIQM          S+TQN+SFGS   PFQ WQKSGSCP
Sbjct: 63  VIGCVDIYKQPAFDHPLLKNHTIQM----------SNTQNKSFGSESNPFQIWQKSGSCP 122

Query: 61  KGTIPIRRVGREDLLRANSLHHFGKKFPYGDSKLGQEFNRSTAILITTGVNYIGASGNIN 120
           KGTIPIRRV REDLLRANS+HHFGKKFPYG SKLGQEFN    ILITTG+NYIGASGNIN
Sbjct: 123 KGTIPIRRVRREDLLRANSVHHFGKKFPYGTSKLGQEFN---PILITTGLNYIGASGNIN 182

Query: 121 VWNPKVDLPNDFTASKVWLKN 141
           VWNPKVDLPNDFTASK+WLKN
Sbjct: 183 VWNPKVDLPNDFTASKIWLKN 190

[Close]

BLAST of Cucsat.G11365.T1 vs. ExPASy TrEMBL
Match: A0A6J1FL22 (uncharacterized protein LOC111446223 OS=Cucurbita moschata OX=3662 GN=LOC111446223 PE=4 SV=1)

HSP 1 Score: 211 bits (538), Expect = 2.19e-66
Identity = 98/141 (69.50%), Postives = 113/141 (80.14%), Query Frame = 0


Query: 1   IMECVDVYKQPAFHHPLLKNHTIQMKPDLSIDLKMSSTQNESFGSRLYPFQTWQKSGSCP 60
           I++CVD+YKQPAF HP LKNHTI M+PD  +D +MS+  NE+F       Q WQ+SGSCP
Sbjct: 71  IIDCVDIYKQPAFDHPALKNHTILMEPDWGVDWRMSTEHNEAF-------QVWQRSGSCP 130

Query: 61  KGTIPIRRVGREDLLRANSLHHFGKKFPYGDSKLGQEFNRSTAILITTGVNYIGASGNIN 120
            GTIPIRRV  +DLLRANSL  FGKKFPY  SKLG+E NRSTAIL T G NYIGASG +N
Sbjct: 131 NGTIPIRRVREQDLLRANSLDSFGKKFPYESSKLGKEVNRSTAILYTAGFNYIGASGQLN 190

Query: 121 VWNPKVDLPNDFTASKVWLKN 141
           VWNPKVDLP+DFTAS++WLKN
Sbjct: 191 VWNPKVDLPSDFTASRIWLKN 204

The following BLAST results are available for this feature:

BLAST of Cucsat.G11365.T1 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G11365.T1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141419.2	5.99e-98	99.29	uncharacterized protein LOC101213587 [Cucumis sativus]	[more]
KGN55313.1	7.90e-98	99.29	hypothetical protein Csa_012040 [Cucumis sativus]	[more]
XP_016901292.1	6.34e-87	87.94	PREDICTED: uncharacterized protein LOC103493897 [Cucumis melo] >KAA0064483.1 unc...	[more]
XP_038896670.1	1.21e-77	78.01	uncharacterized protein LOC120084931 [Benincasa hispida]	[more]
TYK20107.1	5.37e-72	78.72	uncharacterized protein E5676_scaffold134G002320 [Cucumis melo var. makuwa]	[more]

BLAST of Cucsat.G11365.T1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L0M3	3.82e-98	99.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G645870 PE=4 SV=1	[more]
A0A5A7V8M6	3.07e-87	87.94	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S4DZ87	3.07e-87	87.94	uncharacterized protein LOC103493897 OS=Cucumis melo OX=3656 GN=LOC103493897 PE=...	[more]
A0A5D3D964	2.60e-72	78.72	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1FL22	2.19e-66	69.50	uncharacterized protein LOC111446223 OS=Cucurbita moschata OX=3662 GN=LOC1114462...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025521	Neprosin activation peptide	PFAM	PF14365	Neprosin_AP	coord: 1..88 e-value: 4.5E-29 score: 101.4
None	No IPR available	PANTHER	PTHR31589	PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED	coord: 1..141
None	No IPR available	PANTHER	PTHR31589:SF2	ASLB (DUF239)-RELATED	coord: 1..141

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G11365	Cucsat.G11365	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G11365.T1.E1	Cucsat.G11365.T1.E1	exon
Cucsat.G11365.T1.E2	Cucsat.G11365.T1.E2	exon
Cucsat.G11365.T1.E3	Cucsat.G11365.T1.E3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G11365.T1.C3	Cucsat.G11365.T1.C3	CDS
Cucsat.G11365.T1.C2	Cucsat.G11365.T1.C2	CDS
Cucsat.G11365.T1.C1	Cucsat.G11365.T1.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G11365.T1	Cucsat.G11365.T1-protein	polypeptide