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Cucsat.G1071.T4 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CGCTATTAACTTTTCGTACGAAAATCGAGTGGCAACATAGAAGGCAGTTGAGAGGATCACCAATGGCGAATTCTTCTTCTTCTTCGCCAATCCCTTCCTTAATCTTTGTGTCGCCGACGATTCAGATAAAGGATATGTCTGAACAAAATTTAATCGGAACTATTCAAATGTTCAATGAATTGACCGGCTCCGGCGCAATTCCGGACGATTGCGACACCAAGGCCTTTTATTCCCACATCACTAACGGTCATGTCCGCCAGCTCCACCGTGAACGAGGCCGTCTCACCTACCTCCTTTGCGTCAAACCTGCTGTAGCGGTAATTTCTTAATTCCCCTTCCAAATTTGTTCTCTGATCTGAACCGAAACAATGTCTTATCGAGCTTCCGATGTCTGTGAGAACTTGAAAAATTCACGATTCATCATTATTTGTTTTCCTATAAACGGTGGTTTCGGATGTGAATCGAAATGATATAATTGGGAACTTGAAAATTCGCTGTTCGTCAATGTAGTGATATGTTTGGTTGCGGAGATAATGTGGTTACTGATTTGAATGTAAACAGTATCTATGGAAACTTGAAAACTAAGTATTCATCCTTACAGCTAAGTATTCGTACTTATAGTAGTCTGTTGGATTGCTGGGAAAACGAGGTTTTTCAAATTCTCATCATTTGCATCTATCACTTTCCAGTCTCTTGTATCAATCAATATTATTTACATTCACGTTAAAGAAAGATATATGTTGTGAAATTTCAGAATGTTTATGGGTTTTTACATGGAGGATTTGTTGCTACGGTTGCGGAGCTCGTATCAATAGCTTGTGCCAGAACTGTCGTGGGTGAGGATAAGAAATTATTTATTGGGGAACTGAGCATTTCTTATCTCTCTGGTGCTCCGGAAAATGTGAGTAAAATTTAAGTTACTGTTTGCTTCCTTGTGATTTTAAGTTGGGGCCTGTGAAGTAGGATAGTTAAGCTGACAAAATTGTCTACCAAATTGACCAAAACTGAGTCAAAACTCGAACCAACAGAACCAACCAAAACGAAATGAACTAGTAGAACTAACAACATCGGAATGGACAAACTTCGCCACTTCAAATTTAATGAACCCAATTGGTTTGTTCAGTTAATTTTCTTGGTTTTTCTTTTCCAGTTTAGAAAGCTAAAAAGTTTATAGTAGAAACTGAATGTTTAGATTTCTCGGACGTTAGAGTCCTGAGATTGTTTTCGAGGGCACTGCATTCTCAAACTTTTGTGTACTTAACCATACATGGGCTGGAAGGTTGCATGAATCTATCAGTGTCAATGTTTTATGAGTTGGGTGTGAGCATCAAGTATGCTTTATGAAGTATTTTCAATAGGTTTGTTCGCTTTAGCTCACTTTCAAAAAACCTCACACTCATAATTTATGGAGAAGTACCATTCCTTTTCCTTTTTACGGGGATTAAGAAGAAGTGCCCTCATCCAAATCCTGAGTTTTCTATTTGAGAGATTAAGAATTACATTGTCACGCTTTACAATCTTCTTGGTGTGGGATCAGTATTATATTACCACCACAATCTACATCAGAACCAGAACCACAAATGGGACTGAGTTAGGTTGACTGTTCTAGGTCGGATATCGAAGTAGTTTGGTACAATGAGAATAAGAAGAAACTTATCTTAACAGTAAAGATTGAAATTATACAAAACCGAAGCTTGAATTCAAGTAGGAAGCCACTCATCCATCATTGTTTGCATCAAGTCTTCAATTCACACGTCGGTAAAGATGGTATAGCATTCAGGAGATAGTGAGCAGATGTTTTATGATCCGGGCAGTGTGTGTGTGTGGGTTAAATACTTATTAAGGATATATCTCAGTTTTACATACATTTTTATTCAATTATTTGTCTTTTCATCCCACATTAGAAAATTCAGGATTTCTTTACTTTCCATAGAAGATACAAATTTCAAGGTAAAAATGGAGCCAAGAGCTCTTCAGACGGAATTAACATTGTGAGATAAATATTGTTGTATTTCTCTCTTTAAAGTTATGTAGCTATCATTAGCTATACATGCAAGGAAAAGGGAAACCCTATCATTAGCTATCATTGTATTTGTTACTTCTTGTTGACCGTCCTTCATTGGAAAGCTGTGAATTGATTTAATTCCTCCTCAACTCCCTGTGTCAATTGTTTTCGAGTAGAAACTCGAACTCCATGATTATTATTAATTCAATTTTCAGACCTTATTTCTGAGTTGGGCATAAAAATTTGTTGGTGCAGGCAGAGGTTATAGTAGAAGCTTCTGTTTTGAGGAGTGGAAGAAGTTTGAGTGTGGTGGAAGTAGAGTTTAAACTTCAAAAGACAGGTAAGTTGGTGTACACAGCTCGTTTTACCCTTTATAACATGCCAATGGCAAAGCTATAGAAATCCTTGGTTCGTTCTACCTAAGATCAAAATTTGTCAGCAACCTAAATAAAAACCCCAATGCTTCGAGTCGAAGAATCGTGTTGCTCAGTGTAATGTTCAAAAGAGTAGGGAATGTGTATGGATTACACACTTGATTATCCTTGTATACTATATATATATATATTTGCAAATTATAGAAAATAGTTCAGTTTCTTGCTTCAATATTTTGTATAGTCACGTTCATGTATGGATTAGATTA CTATTAACTTTTCGTACGAAAATCGAGTGGCAACATAGAAGGCAGTTGAGAGGATCACCAATGGCGAATTCTTCTTCTTCTTCGCCAATCCCTTCCTTAATCTTTGTGTCGCCGACGATTCAGATAAAGGATATGTCTGAACAAAATTTAATCGGAACTATTCAAATGTTCAATGAATTGACCGGCTCCGGCGCAATTCCGGACGATTGCGACACCAAGGCCTTTTATTCCCACATCACTAACGGTCATGTCCGCCAGCTCCACCGTGAACGAGGCCGTCTCACCTACCTCCTTTGCGTCAAACCTGCTGTAGCGGCAGAGGTTATAGTAGAAGCTTCTGTTTTGAGGAGTGGAAGAAGTTTGAGTGTGGTGGAAGTAGAGTTTAAACTTCAAAAGACAGGTAAGTTGGTGTACACAGCTCGTTTTACCCTTTATAACATGCCAATGGCAAAGCTATAG LLTFRTKIEWQHRRQLRGSPMANSSSSSPIPSLIFVSPTIQIKDMSEQNLIGTIQMFNELTGSGAIPDDCDTKAFYSHITNGHVRQLHRERGRLTYLLCVKPAVAAEVIVEASVLRSGRSLSVVEVEFKLQKTGKLVYTARFTLYNMPMAKL Homology
BLAST of Cucsat.G1071.T4 vs. NCBI nr
Match: XP_004133876.1 (acyl-coenzyme A thioesterase 13 [Cucumis sativus] >KGN56540.1 hypothetical protein Csa_010281 [Cucumis sativus]) HSP 1 Score: 235 bits (599), Expect = 2.30e-76 Identity = 132/181 (72.93%), Postives = 132/181 (72.93%), Query Frame = 0
BLAST of Cucsat.G1071.T4 vs. NCBI nr
Match: XP_008438081.1 (PREDICTED: acyl-coenzyme A thioesterase 13 [Cucumis melo] >KAA0048986.1 acyl-coenzyme A thioesterase 13 [Cucumis melo var. makuwa] >TYK17578.1 acyl-coenzyme A thioesterase 13 [Cucumis melo var. makuwa]) HSP 1 Score: 194 bits (494), Expect = 2.39e-60 Identity = 112/180 (62.22%), Postives = 121/180 (67.22%), Query Frame = 0
BLAST of Cucsat.G1071.T4 vs. NCBI nr
Match: XP_038892661.1 (uncharacterized protein LOC120081650 isoform X1 [Benincasa hispida]) HSP 1 Score: 170 bits (431), Expect = 7.82e-51 Identity = 101/176 (57.39%), Postives = 110/176 (62.50%), Query Frame = 0
BLAST of Cucsat.G1071.T4 vs. NCBI nr
Match: XP_038892740.1 (uncharacterized protein LOC120081650 isoform X2 [Benincasa hispida]) HSP 1 Score: 168 bits (425), Expect = 5.98e-50 Identity = 102/174 (58.62%), Postives = 110/174 (63.22%), Query Frame = 0
BLAST of Cucsat.G1071.T4 vs. NCBI nr
Match: KAG7018981.1 (hypothetical protein SDJN02_20858, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 160 bits (405), Expect = 9.91e-47 Identity = 92/176 (52.27%), Postives = 108/176 (61.36%), Query Frame = 0
BLAST of Cucsat.G1071.T4 vs. ExPASy TrEMBL
Match: A0A0A0L3N5 (4HBT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G122640 PE=3 SV=1) HSP 1 Score: 235 bits (599), Expect = 1.11e-76 Identity = 132/181 (72.93%), Postives = 132/181 (72.93%), Query Frame = 0
BLAST of Cucsat.G1071.T4 vs. ExPASy TrEMBL
Match: A0A5A7U3Z9 (Acyl-coenzyme A thioesterase 13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004480 PE=3 SV=1) HSP 1 Score: 194 bits (494), Expect = 1.16e-60 Identity = 112/180 (62.22%), Postives = 121/180 (67.22%), Query Frame = 0
BLAST of Cucsat.G1071.T4 vs. ExPASy TrEMBL
Match: A0A1S3AVH8 (acyl-coenzyme A thioesterase 13 OS=Cucumis melo OX=3656 GN=LOC103483296 PE=3 SV=1) HSP 1 Score: 194 bits (494), Expect = 1.16e-60 Identity = 112/180 (62.22%), Postives = 121/180 (67.22%), Query Frame = 0
BLAST of Cucsat.G1071.T4 vs. ExPASy TrEMBL
Match: A0A6J1EC92 (acyl-coenzyme A thioesterase 13-like OS=Cucurbita moschata OX=3662 GN=LOC111431890 PE=3 SV=1) HSP 1 Score: 159 bits (402), Expect = 9.50e-47 Identity = 92/176 (52.27%), Postives = 108/176 (61.36%), Query Frame = 0
BLAST of Cucsat.G1071.T4 vs. ExPASy TrEMBL
Match: A0A6J1IR82 (uncharacterized protein LOC111479273 OS=Cucurbita maxima OX=3661 GN=LOC111479273 PE=3 SV=1) HSP 1 Score: 158 bits (400), Expect = 9.42e-46 Identity = 91/176 (51.70%), Postives = 108/176 (61.36%), Query Frame = 0
BLAST of Cucsat.G1071.T4 vs. TAIR 10
Match: AT3G61200.1 (Thioesterase superfamily protein ) HSP 1 Score: 54.7 bits (130), Expect = 7.6e-08 Identity = 26/61 (42.62%), Postives = 44/61 (72.13%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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