Cucsat.G1014.T9 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GGTAGCACCAACTTCAAGTAAAGCGGTGGGTTACAGTGAGAGAGAGAGAGAGATAGAGGAGTGAGTAATGAGCAACCTCTCCTCCATTGAAGCTCCAACTGAAAAACACTACCACCATTACAGCGCCTGCAACCCCATTCCTTCTCCCGCTCTTTACATTCTCATTCCCCTTTTTATTTTGGGCTTTTCCGTTTCCATTTTCGTCCTCGTTGTCGTTCACAACGCCTTCTTCTTCATTTCTCTTCTCTTTCTATCCATCTTCCTCTCTGCTTTTGCCCTCTGGAATAGCCTCAACTTCTCCTCCAAAACCGCCATACTCTCATTTCTTAACTCCCTTCCTGACTCCGACCTCACACTTGCTCAAGAGGGTCAACTCGTTAAGATTTCAGGGGTATTCTTTTCCTTTTTCTTCAATCCCCATATTTCCTTTTTTTTTCCCCTCTAATTTCTTTACCATTTTCAGTTTCATGGGTTGTATTTGCTCTTTTCAATTGGTATGACTGATGGGTTTGGTTTGCTTCTGCATATTTTTTGTGTTTATTGCTATGAGAGGCTACTAAATTCTGCTTTGAAGTGTATATTGAGAGGACTTCTTCTTATTGTTCGTTTTGTTGACTTGATAATTGTTAATATGCTTTGGTATCCTAACTTGGTTTGCTTATCCCAATGTGAGTTTGCATTTTGAATACGATATGAGGCAGGCTGTTTCTTGTGTTTTTTAATGTGTTATCCCACCTGTGAAATGTATGCTTGTGACATTTTAATATTTTAAGAACCCAAAACTTTGAGTTAGGAATAGTTTTTGAAAGGCTGAAAAGTGTATTGAACTGATTGTAATCACTTTTTTTAAAAAAATAAAAATTATAATGTTTGATTAGATATTTAAAAGTCATTTAGCAAGTCTTAGAATACTTACACAATTCTTTGGAGGTGGTTCTTCAATGAAATTGTTCATGGGAGAAGTGTCATATTTTAGAGTATTTTCACGAGAAGTCATCTGGAACTCAATTTTAGTTATTGACCTACTACTTCGTAGGGAGAAAAATTGTTCCGAGTGGTAGTTTCTTGTGTTTGGAAGTACTTACTATGCGGGCTTCGTGTTACCTGTTTAGGATTTTATTCATTTTTGTTCTTAAATACATTCCAGGTATGTTTGAGGATTTATGTTTACTGCTTTTTTATATTCAGTTTGCTTCGTGCGGAACAGTATCCCTGGAATCATCCTATGAAAAAGCTACTGGGTGTGTTTATGCATCAACCTCTTTATATGAATATAGAGGAATGCCTATGATTTTTCAAAAGATAACTCAGCCTTACTGTGGTTGGAGGTTAGTATACAGTGAGGTATGCAAATTCTACTCCGAAGAAACGTATCATTTCTTTGTTTTTATTGTTCTTTTGCACCTATAAAGCAATGGAGATTTTGTTTTTTTCCTGACATTTTAACTTTTTTGCATACCTTTTCTTTCCCTTACTCAGTCGGTCACTTTATGTTGTTTGGAAGCTACTGCATGAAGTGAAAGAAGTGACATTTAGCTCCAATTTTCTTTATGAGTCAAATGTCTCCAGTTGTATTCATTATCTTGACATTCATTCTGTTCATTGACCTTATAGGTCTACAGTTCTTATCTGAAGAATCAAATTTGGGAGGATTAGCACAAGATTTTCAAACTAGTTTGCTACTGTTCTTCCTTTTTCTTTGAGCCATCAAATTCAATATTTATTATTCTAAAGAATACAGAACAAGAATCTTATAAAACATAACTTGTATTGCTAATCCTATACATCAATGATATCCCTTGATATCATTTTTCTTTTTAGACATCTAATGTAGGAATATCTGTCTATTCACATTTGGGAATCTAGACAGATTGCACCTTTTAGTTTTAAACATGGGTGTTATTTTAGACTTTTAATATCGTGTGCTCGTATTTCAACATGGCAGAGGTTTTCCACTGACTTCTACATAACTGATAGAAAAACTGGTATTAGAGCTATGGTAAGGGCCGGCCCCGGTAGTAAACTGGTTCCTCTTATTATTGAGAGTAAGCTTGTTAATACTACAAGACATCGGAAGATTCTGTCTCCTTCCTTGAGAAAATGGCTGAGAGAAAAAAACATTTCTACTGATGCTCGAATACTTCGACTTGAAGAAGGGTAACTCCGCTTATCGTGATAAAATCTATTTGTTTGACTTTGCTTGGCCATAATTTTAGAAGCTAATTCCATGTAATTTTAGCAGATATGTTCAAGAAGGCAGCTTTGTATCTGTATTCGGAATGTTGCATAGGAATAACGGTCAAATAACTATAGTTCAACCTCCAGATGTAATCTCAACTGGATGTGTATGGCGGAAATTTCTTCTTCCCATTTACATTGATGGACTAGTTCTTGGGGTTTCACAGGCAACTGGCCCTTTGCTCGGTCCAGGATCGTTATATCACCATGAACAGTTTGCTGACATATGAAGCTTAAATAGTATGTTGTAGATGGAAATTTTAGATGAAGACCAAGTCCATTGGAATTACTAACCTTTTGCTTCTCATGAGTAACTTTAATCTTCTTGTAGTTCATCTATCCCTGCCCCTTCAGTTTCCGGAGTTACATTTATGCATGTCCATAGGATTCTGTTAACTTCAAATTCTACTTGAATGTACATTGAGTAATTTTATGGAAATCAACCATTGGTGCTTTAACCAGCCAAATCTTGCAGATGTTAACCAAAGACATTGCCAACTTGGTGGTGATATTGCTCCGGTAATGAGAATGTGCACTTGGAGGTTGTTTAAATTTCTAGACCTATCTTGTTTACTCTTGGATCGGGCTGGTTAATATAAGCCAGTTCAATTGTTTCACTTGGCGTGATTAAGTCCTATCAGTATAAAAAGTTTCTTCCAAATTGTCTTAAACTCTAAAGCGTACA ATGAGCAACCTCTCCTCCATTGAAGCTCCAACTGAAAAACACTACCACCATTACAGCGCCTGCAACCCCATTCCTTCTCCCGCTCTTTACATTCTCATTCCCCTTTTTATTTTGGGCTTTTCCGTTTCCATTTTCGTCCTCGTTGTCGTTCACAACGCCTTCTTCTTCATTTCTCTTCTCTTTCTATCCATCTTCCTCTCTGCTTTTGCCCTCTGGAATAGCCTCAACTTCTCCTCCAAAACCGCCATACTCTCATTTCTTAACTCCCTTCCTGACTCCGACCTCACACTTGCTCAAGAGGGTCAACTCGTTAAGATTTCAGGGTATCCCTGGAATCATCCTATGAAAAAGCTACTGGGTGTGTTTATGCATCAACCTCTTTATATGAATATAGAGGAATGCCTATGA MSNLSSIEAPTEKHYHHYSACNPIPSPALYILIPLFILGFSVSIFVLVVVHNAFFFISLLFLSIFLSAFALWNSLNFSSKTAILSFLNSLPDSDLTLAQEGQLVKISGYPWNHPMKKLLGVFMHQPLYMNIEECL Homology
BLAST of Cucsat.G1014.T9 vs. ExPASy Swiss-Prot
Match: Q9FZ45 (Uncharacterized membrane protein At1g16860 OS=Arabidopsis thaliana OX=3702 GN=At1g16860 PE=1 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 2.0e-04 Identity = 29/91 (31.87%), Postives = 48/91 (52.75%), Query Frame = 0
BLAST of Cucsat.G1014.T9 vs. NCBI nr
Match: XP_004133793.1 (uncharacterized membrane protein At1g16860 [Cucumis sativus] >KGN56391.1 hypothetical protein Csa_009581 [Cucumis sativus]) HSP 1 Score: 199 bits (506), Expect = 7.45e-61 Identity = 107/109 (98.17%), Postives = 109/109 (100.00%), Query Frame = 0
BLAST of Cucsat.G1014.T9 vs. NCBI nr
Match: XP_016898903.1 (PREDICTED: uncharacterized membrane protein At1g16860-like [Cucumis melo] >KAA0048859.1 putative membrane protein [Cucumis melo var. makuwa] >TYK20811.1 putative membrane protein [Cucumis melo var. makuwa]) HSP 1 Score: 192 bits (487), Expect = 5.51e-58 Identity = 102/109 (93.58%), Postives = 107/109 (98.17%), Query Frame = 0
BLAST of Cucsat.G1014.T9 vs. NCBI nr
Match: XP_038902469.1 (uncharacterized membrane protein At1g16860-like [Benincasa hispida]) HSP 1 Score: 163 bits (413), Expect = 7.33e-47 Identity = 93/109 (85.32%), Postives = 101/109 (92.66%), Query Frame = 0
BLAST of Cucsat.G1014.T9 vs. NCBI nr
Match: XP_023527377.1 (uncharacterized membrane protein At1g16860-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 156 bits (395), Expect = 3.70e-44 Identity = 89/109 (81.65%), Postives = 98/109 (89.91%), Query Frame = 0
BLAST of Cucsat.G1014.T9 vs. NCBI nr
Match: XP_022924397.1 (uncharacterized membrane protein At1g16860-like [Cucurbita moschata]) HSP 1 Score: 156 bits (395), Expect = 3.70e-44 Identity = 89/109 (81.65%), Postives = 98/109 (89.91%), Query Frame = 0
BLAST of Cucsat.G1014.T9 vs. ExPASy TrEMBL
Match: A0A0A0L8G1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119250 PE=4 SV=1) HSP 1 Score: 199 bits (506), Expect = 3.61e-61 Identity = 107/109 (98.17%), Postives = 109/109 (100.00%), Query Frame = 0
BLAST of Cucsat.G1014.T9 vs. ExPASy TrEMBL
Match: A0A5D3DB30 (Putative membrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00720 PE=4 SV=1) HSP 1 Score: 192 bits (487), Expect = 2.67e-58 Identity = 102/109 (93.58%), Postives = 107/109 (98.17%), Query Frame = 0
BLAST of Cucsat.G1014.T9 vs. ExPASy TrEMBL
Match: A0A1S4DSG0 (uncharacterized membrane protein At1g16860-like OS=Cucumis melo OX=3656 GN=LOC103483151 PE=4 SV=1) HSP 1 Score: 192 bits (487), Expect = 2.67e-58 Identity = 102/109 (93.58%), Postives = 107/109 (98.17%), Query Frame = 0
BLAST of Cucsat.G1014.T9 vs. ExPASy TrEMBL
Match: A0A6J1E8T9 (uncharacterized membrane protein At1g16860-like OS=Cucurbita moschata OX=3662 GN=LOC111431906 PE=4 SV=1) HSP 1 Score: 156 bits (395), Expect = 1.79e-44 Identity = 89/109 (81.65%), Postives = 98/109 (89.91%), Query Frame = 0
BLAST of Cucsat.G1014.T9 vs. ExPASy TrEMBL
Match: A0A6J1IQE9 (uncharacterized membrane protein At1g16860-like OS=Cucurbita maxima OX=3661 GN=LOC111479071 PE=4 SV=1) HSP 1 Score: 153 bits (387), Expect = 2.91e-43 Identity = 88/109 (80.73%), Postives = 97/109 (88.99%), Query Frame = 0
BLAST of Cucsat.G1014.T9 vs. TAIR 10
Match: AT1G78880.1 (Ubiquitin-specific protease family C19-related protein ) HSP 1 Score: 50.1 bits (118), Expect = 1.7e-06 Identity = 31/91 (34.07%), Postives = 49/91 (53.85%), Query Frame = 0
BLAST of Cucsat.G1014.T9 vs. TAIR 10
Match: AT1G16860.1 (Ubiquitin-specific protease family C19-related protein ) HSP 1 Score: 47.0 bits (110), Expect = 1.4e-05 Identity = 29/91 (31.87%), Postives = 48/91 (52.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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