Cucsat.G1014.T3 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AATCCTTTAGGATGGGACAAAAAAGGGTAATTTAAAGAGGGAGAAGAAAAGAAGGAGCCGTTTGAGTATGGTAGCACCAACTTCAAGTAAAGCGGTGGGTTACAGTGAGAGAGAGAGAGAGATAGAGGAGTGAGTAATGAGCAACCTCTCCTCCATTGAAGCTCCAACTGAAAAACACTACCACCATTACAGCGCCTGCAACCCCATTCCTTCTCCCGCTCTTTACATTCTCATTCCCCTTTTTATTTTGGGCTTTTCCGTTTCCATTTTCGTCCTCGTTGTCGTTCACAACGCCTTCTTCTTCATTTCTCTTCTCTTTCTATCCATCTTCCTCTCTGCTTTTGCCCTCTGGAATAGCCTCAACTTCTCCTCCAAAACCGCCATACTCTCATTTCTTAACTCCCTTCCTGACTCCGACCTCACACTTGCTCAAGAGGGTCAACTCGTTAAGATTTCAGGGGTATTCTTTTCCTTTTTCTTCAATCCCCATATTTCCTTTTTTTTTCCCCTCTAATTTCTTTACCATTTTCAGTTTCATGGGTTGTATTTGCTCTTTTCAATTGGTATGACTGATGGGTTTGGTTTGCTTCTGCATATTTTTTGTGTTTATTGCTATGAGAGGCTACTAAATTCTGCTTTGAAGTGTATATTGAGAGGACTTCTTCTTATTGTTCGTTTTGTTGACTTGATAATTGTTAATATGCTTTGGTATCCTAACTTGGTTTGCTTATCCCAATGTGAGTTTGCATTTTGAATACGATATGAGGCAGGCTGTTTCTTGTGTTTTTTAATGTGTTATCCCACCTGTGAAATGTATGCTTGTGACATTTTAATATTTTAAGAACCCAAAACTTTGAGTTAGGAATAGTTTTTGAAAGGCTGAAAAGTGTATTGAACTGATTGTAATCACTTTTTTTAAAAAAATAAAAATTATAATGTTTGATTAGATATTTAAAAGTCATTTAGCAAGTCTTAGAATACTTACACAATTCTTTGGAGGTGGTTCTTCAATGAAATTGTTCATGGGAGAAGTGTCATATTTTAGAGTATTTTCACGAGAAGTCATCTGGAACTCAATTTTAGTTATTGACCTACTACTTCGTAGGGAGAAAAATTGTTCCGAGTGGTAGTTTCTTGTGTTTGGAAGTACTTACTATGCGGGCTTCGTGTTACCTGTTTAGGATTTTATTCATTTTTGTTCTTAAATACATTCCAGGTATGTTTGAGGATTTATGTTTACTGCTTTTTTATATTCAGTTTGCTTCGTGCGGAACAGTATCCCTGGAATCATCCTATGAAAAAGCTACTGGGTGTGTTTATGCATCAACCTCTTTATATGAATATAGAGGAATGCCTATGATTTTTCAAAAGATAACTCAGCCTTACTGTGGTTGGAGGTTAGTATACAGTGAGGTATGCAAATTCTACTCCGAAGAAACGTATCATTTCTTTGTTTTTATTGTTCTTTTGCACCTATAAAGCAATGGAGATTTTGTTTTTTTCCTGACATTTTAACTTTTTTGCATACCTTTTCTTTCCCTTACTCAGTCGGTCACTTTATGTTGTTTGGAAGCTACTGCATGAAGTGAAAGAAGTGACATTTAGCTCCAATTTTCTTTATGAGTCAAATGTCTCCAGTTGTATTCATTATCTTGACATTCATTCTGTTCATTGACCTTATAGGTCTACAGTTCTTATCTGAAGAATCAAATTTGGGAGGATTAGCACAAGATTTTCAAACTAGTTTGCTACTGTTCTTCCTTTTTCTTTGAGCCATCAAATTCAATATTTATTATTCTAAAGAATACAGAACAAGAATCTTATAAAACATAACTTGTATTGCTAATCCTATACATCAATGATATCCCTTGATATCATTTTTCTTTTTAGACATCTAATGTAGGAATATCTGTCTATTCACATTTGGGAATCTAGACAGATTGCACCTTTTAGTTTTAAACATGGGTGTTATTTTAGACTTTTAATATCGTGTGCTCGTATTTCAACATGGCAGAGGTTTTCCACTGACTTCTACATAACTGATAGAAAAACTGGTATTAGAGCTATGGTAAGGGCCGGCCCCGGTAGTAAACTGGTTCCTCTTATTATTGAGAGTAAGCTTGTTAATACTACAAGACATCGGAAGATTCTGTCTCCTTCCTTGAGAAAATGGCTGAGAGAAAAAAACATTTCTACTGATGCTCGAATACTTCGACTTGAAGAAGGGTAACTCCGCTTATCGTGATAAAATCTATTTGTTTGACTTTGCTTGGCCATAATTTTAGAAGCTAATTCCATGTAATTTTAGCAGATATGTTCAAGAAGGCAGCTTTGTATCTGTATTCGGAATGTTGCATAGGAATAACGGTCAAATAACTATAGTTCAACCTCCAGATGTAATCTCAACTGGATGTGTATGGCGGAAATTTCTTCTTCCCATTTACATTGATGGACTAGTTCTTGGGGTTTCACAGGCAACTGGCCCTTTGCTCGGTCCAGGATCGTTATATCACCATGAACAGTTTGCTGACATATGAAGCTTAAATAGTATGTTGTAGATGGAAATTTTAGATGAAGACCAAGTCCATTGGAATTACTAACCTTTTGCTTCTCATGAGTAACTTTAATCTTCTTGTAGTTCATCTATCCCTGCCCCTTCAGTTTCCGGAGTTACATTTATGCATGTCCATAGGATTCTGTTAACTTCAAATTCTACTTGAATGTACATTGAGTAATTTTATGGAAATCAACCATTGGTGCTTTAACCAGCCAAATCTTGCAGATGTTAACCAAAGACATTGCCAACTTGGTGGTGATATTGCTCCGGTAATGAGAATGTGCACTTGGAGGTTGTTTAAATTTCTAGACCTATCTTGTTTACTCTTGGATCGGGCTGGTTAATATAAGCCAGTTCAATTGTTTCACTTGGCGTGATTAAGTCCTATCAGTATAAAAAGTTTCTTCCAAATTGTCTTAAACTCTAAAGCGTACATATGCTGCACCATTAAGTCTAGAAGAAGAG ATGAGCAACCTCTCCTCCATTGAAGCTCCAACTGAAAAACACTACCACCATTACAGCGCCTGCAACCCCATTCCTTCTCCCGCTCTTTACATTCTCATTCCCCTTTTTATTTTGGGCTTTTCCGTTTCCATTTTCGTCCTCGTTGTCGTTCACAACGCCTTCTTCTTCATTTCTCTTCTCTTTCTATCCATCTTCCTCTCTGCTTTTGCCCTCTGGAATAGCCTCAACTTCTCCTCCAAAACCGCCATACTCTCATTTCTTAACTCCCTTCCTGACTCCGACCTCACACTTGCTCAAGAGGGTCAACTCGTTAAGATTTCAGGGTTTGCTTCGTGCGGAACAGTATCCCTGGAATCATCCTATGAAAAAGCTACTGGGTGTGTTTATGCATCAACCTCTTTATATGAATATAGAGGAATGCCTATGATTTTTCAAAAGATAACTCAGCCTTACTGTGGTTGGAGGTTAGTATACAGTGAGGTATGCAAATTCTACTCCGAAGAAACGTATCATTTCTTTGTTTTTATTGTTCTTTTGCACCTATAA MSNLSSIEAPTEKHYHHYSACNPIPSPALYILIPLFILGFSVSIFVLVVVHNAFFFISLLFLSIFLSAFALWNSLNFSSKTAILSFLNSLPDSDLTLAQEGQLVKISGFASCGTVSLESSYEKATGCVYASTSLYEYRGMPMIFQKITQPYCGWRLVYSEVCKFYSEETYHFFVFIVLLHL Homology
BLAST of Cucsat.G1014.T3 vs. ExPASy Swiss-Prot
Match: Q9FZ45 (Uncharacterized membrane protein At1g16860 OS=Arabidopsis thaliana OX=3702 GN=At1g16860 PE=1 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 3.3e-15 Identity = 54/150 (36.00%), Postives = 78/150 (52.00%), Query Frame = 0
BLAST of Cucsat.G1014.T3 vs. NCBI nr
Match: XP_004133793.1 (uncharacterized membrane protein At1g16860 [Cucumis sativus] >KGN56391.1 hypothetical protein Csa_009581 [Cucumis sativus]) HSP 1 Score: 306 bits (784), Expect = 3.33e-102 Identity = 159/160 (99.38%), Postives = 160/160 (100.00%), Query Frame = 0
BLAST of Cucsat.G1014.T3 vs. NCBI nr
Match: XP_016898903.1 (PREDICTED: uncharacterized membrane protein At1g16860-like [Cucumis melo] >KAA0048859.1 putative membrane protein [Cucumis melo var. makuwa] >TYK20811.1 putative membrane protein [Cucumis melo var. makuwa]) HSP 1 Score: 296 bits (757), Expect = 4.21e-98 Identity = 152/160 (95.00%), Postives = 157/160 (98.12%), Query Frame = 0
BLAST of Cucsat.G1014.T3 vs. NCBI nr
Match: XP_038902469.1 (uncharacterized membrane protein At1g16860-like [Benincasa hispida]) HSP 1 Score: 263 bits (671), Expect = 4.49e-85 Identity = 140/160 (87.50%), Postives = 151/160 (94.38%), Query Frame = 0
BLAST of Cucsat.G1014.T3 vs. NCBI nr
Match: XP_023527377.1 (uncharacterized membrane protein At1g16860-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 252 bits (644), Expect = 5.58e-81 Identity = 132/160 (82.50%), Postives = 147/160 (91.88%), Query Frame = 0
BLAST of Cucsat.G1014.T3 vs. NCBI nr
Match: XP_022924397.1 (uncharacterized membrane protein At1g16860-like [Cucurbita moschata]) HSP 1 Score: 252 bits (644), Expect = 5.58e-81 Identity = 132/160 (82.50%), Postives = 147/160 (91.88%), Query Frame = 0
BLAST of Cucsat.G1014.T3 vs. ExPASy TrEMBL
Match: A0A0A0L8G1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119250 PE=4 SV=1) HSP 1 Score: 306 bits (784), Expect = 1.61e-102 Identity = 159/160 (99.38%), Postives = 160/160 (100.00%), Query Frame = 0
BLAST of Cucsat.G1014.T3 vs. ExPASy TrEMBL
Match: A0A5D3DB30 (Putative membrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00720 PE=4 SV=1) HSP 1 Score: 296 bits (757), Expect = 2.04e-98 Identity = 152/160 (95.00%), Postives = 157/160 (98.12%), Query Frame = 0
BLAST of Cucsat.G1014.T3 vs. ExPASy TrEMBL
Match: A0A1S4DSG0 (uncharacterized membrane protein At1g16860-like OS=Cucumis melo OX=3656 GN=LOC103483151 PE=4 SV=1) HSP 1 Score: 296 bits (757), Expect = 2.04e-98 Identity = 152/160 (95.00%), Postives = 157/160 (98.12%), Query Frame = 0
BLAST of Cucsat.G1014.T3 vs. ExPASy TrEMBL
Match: A0A6J1E8T9 (uncharacterized membrane protein At1g16860-like OS=Cucurbita moschata OX=3662 GN=LOC111431906 PE=4 SV=1) HSP 1 Score: 252 bits (644), Expect = 2.70e-81 Identity = 132/160 (82.50%), Postives = 147/160 (91.88%), Query Frame = 0
BLAST of Cucsat.G1014.T3 vs. ExPASy TrEMBL
Match: A0A6J1IQE9 (uncharacterized membrane protein At1g16860-like OS=Cucurbita maxima OX=3661 GN=LOC111479071 PE=4 SV=1) HSP 1 Score: 249 bits (636), Expect = 4.55e-80 Identity = 131/160 (81.88%), Postives = 146/160 (91.25%), Query Frame = 0
BLAST of Cucsat.G1014.T3 vs. TAIR 10
Match: AT1G78880.1 (Ubiquitin-specific protease family C19-related protein ) HSP 1 Score: 85.9 bits (211), Expect = 3.7e-17 Identity = 49/122 (40.16%), Postives = 70/122 (57.38%), Query Frame = 0
BLAST of Cucsat.G1014.T3 vs. TAIR 10
Match: AT1G16860.1 (Ubiquitin-specific protease family C19-related protein ) HSP 1 Score: 83.2 bits (204), Expect = 2.4e-16 Identity = 54/150 (36.00%), Postives = 78/150 (52.00%), Query Frame = 0
BLAST of Cucsat.G1014.T3 vs. TAIR 10
Match: AT4G22290.1 (Ubiquitin-specific protease family C19-related protein ) HSP 1 Score: 60.5 bits (145), Expect = 1.7e-09 Identity = 37/116 (31.90%), Postives = 64/116 (55.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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