Csor.00g300760.m01 (mRNA) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g300760.m01
TypemRNA
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr18: 10009512 .. 10009847 (+)
Sequence length336
RNA-Seq ExpressionCsor.00g300760.m01
SyntenyCsor.00g300760.m01
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codonsinglepolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACCCGTCTTGCTTTTCTACGCTCCAGGCGGCGATGACAATCAAACATCCAAGTCCGGCGCCTGAAAGCTTCCTTATCCAAGGCATTAGCCCAATACTATCCATTCGCTGGCCTGAGTTCAAGACAATAATGTTTCAATCCCCTGCCACGGCAATGGCAGTCCAGGTGTTGATGAACGAGCTAATCGATGAGGCGTCGGTGATTTTGTGGGACATGAGCAAGCCAATTGTCATGCCACTGCATTGGAATGACGTGGTTTGGACAAGCAGAATGCAGGCTTTGGCAGAGTCGGAGGATGCGATGGAGAAGGGGAGGAATTGGTTGAGTGAGTGA

mRNA sequence

ATGTACCCGTCTTGCTTTTCTACGCTCCAGGCGGCGATGACAATCAAACATCCAAGTCCGGCGCCTGAAAGCTTCCTTATCCAAGGCATTAGCCCAATACTATCCATTCGCTGGCCTGAGTTCAAGACAATAATGTTTCAATCCCCTGCCACGGCAATGGCAGTCCAGGTGTTGATGAACGAGCTAATCGATGAGGCGTCGGTGATTTTGTGGGACATGAGCAAGCCAATTGTCATGCCACTGCATTGGAATGACGTGGTTTGGACAAGCAGAATGCAGGCTTTGGCAGAGTCGGAGGATGCGATGGAGAAGGGGAGGAATTGGTTGAGTGAGTGA

Coding sequence (CDS)

ATGTACCCGTCTTGCTTTTCTACGCTCCAGGCGGCGATGACAATCAAACATCCAAGTCCGGCGCCTGAAAGCTTCCTTATCCAAGGCATTAGCCCAATACTATCCATTCGCTGGCCTGAGTTCAAGACAATAATGTTTCAATCCCCTGCCACGGCAATGGCAGTCCAGGTGTTGATGAACGAGCTAATCGATGAGGCGTCGGTGATTTTGTGGGACATGAGCAAGCCAATTGTCATGCCACTGCATTGGAATGACGTGGTTTGGACAAGCAGAATGCAGGCTTTGGCAGAGTCGGAGGATGCGATGGAGAAGGGGAGGAATTGGTTGAGTGAGTGA

Protein sequence

MYPSCFSTLQAAMTIKHPSPAPESFLIQGISPILSIRWPEFKTIMFQSPATAMAVQVLMNELIDEASVILWDMSKPIVMPLHWNDVVWTSRMQALAESEDAMEKGRNWLSE
Homology
[Close]
BLAST of Csor.00g300760.m01 vs. NCBI nr
Match: KAG6573760.1 (hypothetical protein SDJN03_27647, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 225 bits (573), Expect = 3.90e-74
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0 

Query: 1   MYPSCFSTLQAAMTIKHPSPAPESFLIQGISPILSIRWPEFKTIMFQSPATAMAVQVLMN 60
           MYPSCFSTLQAAMTIKHPSPAPESFLIQGISPILSIRWPEFKTIMFQSPATAMAVQVLMN
Sbjct: 1   MYPSCFSTLQAAMTIKHPSPAPESFLIQGISPILSIRWPEFKTIMFQSPATAMAVQVLMN 60

Query: 61  ELIDEASVILWDMSKPIVMPLHWNDVVWTSRMQALAESEDAMEKGRNWLSE 111
           ELIDEASVILWDMSKPIVMPLHWNDVVWTSRMQALAESEDAMEKGRNWLSE
Sbjct: 61  ELIDEASVILWDMSKPIVMPLHWNDVVWTSRMQALAESEDAMEKGRNWLSE 111

The following BLAST results are available for this feature:
BLAST of Csor.00g300760.m01 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g300760.m01 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6573760.13.90e-74100.00hypothetical protein SDJN03_27647, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g300760.m01 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g300760.m01 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Csor.00g300760Csor.00g300760gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csor.00g300760.m01.CDS01Csor.00g300760.m01.CDS01CDS


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csor.00g300760.m01.start_codon01Csor.00g300760.m01.start_codon01start_codon


The following single feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csor.00g300760.m01.single01Csor.00g300760.m01.single01single


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csor.00g300760.m01.stop_codon01Csor.00g300760.m01.stop_codon01stop_codon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Csor.00g300760.m01Csor.00g300760.m01-proteinpolypeptide